utg731_pilon exonerate:protein2genome:local gene 785883 786533 968 - . gene_id 0 ; sequence GL50803_10013-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 785883 786533 . - . utg731_pilon exonerate:protein2genome:local exon 785883 786533 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 785883 786533 968 - . alignment_id 0 ; Query GL50803_10013-t26_1-p1 ; Align 786534 4 651 utg731_pilon exonerate:protein2genome:local gene 784719 785879 1098 - . gene_id 0 ; sequence GL50803_10014-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 784719 785879 . - . utg731_pilon exonerate:protein2genome:local exon 784719 785879 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 784719 785879 1098 - . alignment_id 0 ; Query GL50803_10014-t26_1-p1 ; Align 785880 13 48 ; Align 785832 30 1113 utg731_pilon exonerate:protein2genome:local gene 782932 783882 1363 + . gene_id 0 ; sequence GL50803_10016-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 782932 783882 . + . utg731_pilon exonerate:protein2genome:local exon 782932 783882 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 782932 783882 1363 + . alignment_id 0 ; Query GL50803_10016-t26_1-p1 ; Align 782932 1 951 utg731_pilon exonerate:protein2genome:local gene 775670 780328 6639 + . gene_id 0 ; sequence GL50803_10019-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 775670 780328 . + . utg731_pilon exonerate:protein2genome:local exon 775670 780328 . + . insertions 0 ; deletions 6 utg731_pilon exonerate:protein2genome:local similarity 775670 780328 6639 + . alignment_id 0 ; Query GL50803_10019-t26_1-p1 ; Align 775670 1 723 ; Align 776393 243 225 ; Align 776618 322 120 ; Align 776738 363 3591 utg349_pilon exonerate:protein2genome:local gene 1259032 1259691 952 - . gene_id 0 ; sequence GL50803_10025-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1259032 1259691 . - . utg349_pilon exonerate:protein2genome:local exon 1259032 1259691 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1259032 1259691 952 - . alignment_id 0 ; Query GL50803_10025-t26_1-p1 ; Align 1259692 20 660 utg47_pilon exonerate:protein2genome:local gene 349544 350296 1143 + . gene_id 0 ; sequence GL50803_10027-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 349544 350296 . + . utg47_pilon exonerate:protein2genome:local exon 349544 350296 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 349544 350296 1143 + . alignment_id 0 ; Query GL50803_10027-t26_1-p1 ; Align 349544 1 753 utg47_pilon exonerate:protein2genome:local gene 345952 346872 1400 - . gene_id 0 ; sequence GL50803_10033-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 345952 346872 . - . utg47_pilon exonerate:protein2genome:local exon 345952 346872 . - . insertions 3 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 345952 346872 1400 - . alignment_id 0 ; Query GL50803_10033-t26_1-p1 ; Align 346873 1 684 ; Align 346189 230 78 ; Align 346108 256 156 utg47_pilon exonerate:protein2genome:local gene 339688 345934 9084 + . gene_id 0 ; sequence GL50803_10034-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 339688 341386 . + . utg47_pilon exonerate:protein2genome:local exon 339688 341386 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 341387 341388 . + . intron_id 1 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 341387 341434 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 341433 341434 . + . intron_id 0 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 341435 345934 . + . utg47_pilon exonerate:protein2genome:local exon 341435 345934 . + . insertions 3 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 339688 345934 9084 + . alignment_id 0 ; Query GL50803_10034-t26_1-p1 ; Align 339688 1 1698 ; Align 341437 568 936 ; Align 342373 881 1218 ; Align 343594 1287 660 ; Align 344255 1507 1680 utg47_pilon exonerate:protein2genome:local gene 338344 339429 1443 + . gene_id 0 ; sequence GL50803_10036-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 338344 339429 . + . utg47_pilon exonerate:protein2genome:local exon 338344 339429 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 338344 339429 1443 + . alignment_id 0 ; Query GL50803_10036-t26_1-p1 ; Align 338344 1 1086 utg47_pilon exonerate:protein2genome:local gene 336471 337328 1304 + . gene_id 0 ; sequence GL50803_10038-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 336471 337328 . + . utg47_pilon exonerate:protein2genome:local exon 336471 337328 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 336471 337328 1304 + . alignment_id 0 ; Query GL50803_10038-t26_1-p1 ; Align 336471 1 858 utg212_pilon exonerate:protein2genome:local gene 437498 438116 628 + . gene_id 0 ; sequence GL50803_100472-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 437498 438116 . + . utg212_pilon exonerate:protein2genome:local exon 437498 438116 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 437498 438116 628 + . alignment_id 0 ; Query GL50803_100472-t26_1-p1 ; Align 437498 1 33 ; Align 437532 12 3 ; Align 437535 14 582 utg364_pilon exonerate:protein2genome:local gene 59601 61481 2498 - . gene_id 0 ; sequence GL50803_10051-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 59601 61481 . - . utg364_pilon exonerate:protein2genome:local exon 59601 61481 . - . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 59601 61481 2498 - . alignment_id 0 ; Query GL50803_10051-t26_1-p1 ; Align 61482 1 1881 utg364_pilon exonerate:protein2genome:local gene 64650 65699 1627 + . gene_id 0 ; sequence GL50803_10055-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 64650 65699 . + . utg364_pilon exonerate:protein2genome:local exon 64650 65699 . + . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 64650 65699 1627 + . alignment_id 0 ; Query GL50803_10055-t26_1-p1 ; Align 64650 1 1050 utg364_pilon exonerate:protein2genome:local gene 65717 66310 896 + . gene_id 0 ; sequence GL50803_10056-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 65717 66310 . + . utg364_pilon exonerate:protein2genome:local exon 65717 66310 . + . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 65717 66310 896 + . alignment_id 0 ; Query GL50803_10056-t26_1-p1 ; Align 65717 1 594 utg364_pilon exonerate:protein2genome:local gene 70407 71078 732 - . gene_id 0 ; sequence GL50803_10062-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 70407 71078 . - . utg364_pilon exonerate:protein2genome:local exon 70407 71078 . - . insertions 3 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 70407 71078 732 - . alignment_id 0 ; Query GL50803_10062-t26_1-p1 ; Align 71079 1 81 ; Align 70995 28 588 utg364_pilon exonerate:protein2genome:local gene 71113 72321 1640 + . gene_id 0 ; sequence GL50803_10063-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 71113 72321 . + . utg364_pilon exonerate:protein2genome:local exon 71113 72321 . + . insertions 0 ; deletions 1 utg364_pilon exonerate:protein2genome:local similarity 71113 72321 1640 + . alignment_id 0 ; Query GL50803_10063-t26_1-p1 ; Align 71113 15 1179 ; Align 72292 409 30 utg212_pilon exonerate:protein2genome:local gene 567281 567526 250 - . gene_id 0 ; sequence GL50803_100635-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 567281 567526 . - . utg212_pilon exonerate:protein2genome:local exon 567281 567526 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 567281 567526 250 - . alignment_id 0 ; Query GL50803_100635-t26_1-p1 ; Align 567527 1 246 utg364_pilon exonerate:protein2genome:local gene 75852 76066 103 - . gene_id 0 ; sequence GL50803_10066-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 75852 76066 . - . utg364_pilon exonerate:protein2genome:local exon 75852 76066 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg364_pilon exonerate:protein2genome:local similarity 75852 76066 103 - . alignment_id 0 ; Query GL50803_10066-t26_1-p1 ; Align 76067 11 90 ; Align 75975 41 123 utg364_pilon exonerate:protein2genome:local gene 78031 78993 1459 + . gene_id 0 ; sequence GL50803_10073-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 78031 78993 . + . utg364_pilon exonerate:protein2genome:local exon 78031 78993 . + . insertions 0 ; deletions 1 utg364_pilon exonerate:protein2genome:local similarity 78031 78993 1459 + . alignment_id 0 ; Query GL50803_10073-t26_1-p1 ; Align 78031 1 543 ; Align 78574 183 420 utg47_pilon exonerate:protein2genome:local gene 413532 414986 1790 - . gene_id 0 ; sequence GL50803_10079-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 413532 414986 . - . utg47_pilon exonerate:protein2genome:local exon 413532 414986 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 413532 414986 1790 - . alignment_id 0 ; Query GL50803_10079-t26_1-p1 ; Align 414987 1 1008 ; Align 413976 337 444 utg212_pilon exonerate:protein2genome:local gene 156153 157436 2059 + . gene_id 0 ; sequence GL50803_100845-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 156153 157436 . + . utg212_pilon exonerate:protein2genome:local exon 156153 157436 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 156153 157436 2059 + . alignment_id 0 ; Query GL50803_100845-t26_1-p1 ; Align 156153 1 1284 utg11_pilon exonerate:protein2genome:local gene 921445 921657 197 + . gene_id 0 ; sequence GL50803_100851-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 921445 921657 . + . utg11_pilon exonerate:protein2genome:local exon 921445 921657 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 921445 921657 197 + . alignment_id 0 ; Query GL50803_100851-t26_1-p1 ; Align 921445 1 213 utg47_pilon exonerate:protein2genome:local gene 543615 544844 1942 + . gene_id 0 ; sequence GL50803_100864-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 543615 544844 . + . utg47_pilon exonerate:protein2genome:local exon 543615 544844 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 543615 544844 1942 + . alignment_id 0 ; Query GL50803_100864-t26_1-p1 ; Align 543615 7 1230 utg47_pilon exonerate:protein2genome:local gene 1705339 1705989 822 + . gene_id 0 ; sequence GL50803_100877-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1705339 1705989 . + . utg47_pilon exonerate:protein2genome:local exon 1705339 1705989 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1705339 1705989 822 + . alignment_id 0 ; Query GL50803_100877-t26_1-p1 ; Align 1705339 1 651 utg349_pilon exonerate:protein2genome:local gene 23302 24556 1642 + . gene_id 0 ; sequence GL50803_100887-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 23302 24556 . + . utg349_pilon exonerate:protein2genome:local exon 23302 24556 . + . insertions 12 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 23302 24556 1642 + . alignment_id 0 ; Query GL50803_100887-t26_1-p1 ; Align 23302 2 81 ; Align 23384 29 309 ; Align 23696 132 9 ; Align 23711 135 327 ; Align 24041 244 516 utg731_pilon exonerate:protein2genome:local gene 116499 116669 167 - . gene_id 0 ; sequence GL50803_100900-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 116499 116669 . - . utg731_pilon exonerate:protein2genome:local exon 116499 116669 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 116499 116669 167 - . alignment_id 0 ; Query GL50803_100900-t26_1-p1 ; Align 116670 16 171 utg731_pilon exonerate:protein2genome:local gene 87651 104315 27346 - . gene_id 0 ; sequence GL50803_100906-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 87651 104315 . - . utg731_pilon exonerate:protein2genome:local exon 87651 104315 . - . insertions 18 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 87651 104315 27346 - . alignment_id 0 ; Query GL50803_100906-t26_1-p1 ; Align 104316 1 3045 ; Align 101265 1016 1137 ; Align 100119 1395 4725 ; Align 95391 2970 1779 ; Align 93612 3564 5961 utg47_pilon exonerate:protein2genome:local gene 423793 424218 749 - . gene_id 0 ; sequence GL50803_10091-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 423793 424218 . - . utg47_pilon exonerate:protein2genome:local exon 423793 424218 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 423793 424218 749 - . alignment_id 0 ; Query GL50803_10091-t26_1-p1 ; Align 424219 1 426 utg47_pilon exonerate:protein2genome:local gene 425836 425937 104 - . gene_id 0 ; sequence GL50803_10095-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 425836 425937 . - . utg47_pilon exonerate:protein2genome:local exon 425836 425937 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 425836 425937 104 - . alignment_id 0 ; Query GL50803_10095-t26_1-p1 ; Align 425938 3 102 utg11_pilon exonerate:protein2genome:local gene 53147 53755 1012 - . gene_id 0 ; sequence GL50803_100955-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 53147 53755 . - . utg11_pilon exonerate:protein2genome:local exon 53147 53755 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 53147 53755 1012 - . alignment_id 0 ; Query GL50803_100955-t26_1-p1 ; Align 53756 1 609 utg11_pilon exonerate:protein2genome:local gene 60870 61835 1472 + . gene_id 0 ; sequence GL50803_100959-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 60870 61835 . + . utg11_pilon exonerate:protein2genome:local exon 60870 61835 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 60870 61835 1472 + . alignment_id 0 ; Query GL50803_100959-t26_1-p1 ; Align 60870 1 966 utg11_pilon exonerate:protein2genome:local gene 310480 312102 1884 + . gene_id 0 ; sequence GL50803_100987-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 310480 312102 . + . utg11_pilon exonerate:protein2genome:local exon 310480 312102 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 310480 312102 1884 + . alignment_id 0 ; Query GL50803_100987-t26_1-p1 ; Align 310480 612 963 ; Align 311446 933 657 utg731_pilon exonerate:protein2genome:local gene 1342843 1481970 1197 + . gene_id 0 ; sequence GL50803_101010-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1342843 1343114 . + . utg731_pilon exonerate:protein2genome:local exon 1342843 1343114 . + . insertions 6 ; deletions 1 utg731_pilon exonerate:protein2genome:local splice5 1343115 1343116 . + . intron_id 1 ; splice_site "GC" utg731_pilon exonerate:protein2genome:local intron 1343115 1481039 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1481038 1481039 . + . intron_id 0 ; splice_site "AA" utg731_pilon exonerate:protein2genome:local cds 1481040 1481970 . + . utg731_pilon exonerate:protein2genome:local exon 1481040 1481970 . + . insertions 9 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 1342843 1481970 1197 + . alignment_id 0 ; Query GL50803_101010-t26_1-p1 ; Align 1342843 18 111 ; Align 1342957 55 72 ; Align 1343029 80 69 ; Align 1343101 103 12 ; Align 1481041 108 132 ; Align 1481179 152 387 ; Align 1481566 282 51 ; Align 1481620 299 105 ; Align 1481725 337 111 ; Align 1481836 375 135 utg349_pilon exonerate:protein2genome:local gene 703457 704965 2162 - . gene_id 0 ; sequence GL50803_101011-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 703457 704965 . - . utg349_pilon exonerate:protein2genome:local exon 703457 704965 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 703457 704965 2162 - . alignment_id 0 ; Query GL50803_101011-t26_1-p1 ; Align 704966 1 684 ; Align 704282 230 825 utg64_pilon exonerate:protein2genome:local gene 586958 1026676 1812 - . gene_id 0 ; sequence GL50803_101074-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 1026229 1026676 . - . utg64_pilon exonerate:protein2genome:local exon 1026229 1026676 . - . insertions 18 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 1026227 1026228 . - . intron_id 1 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local intron 846818 1026228 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 846818 846819 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 846414 846817 . - . utg64_pilon exonerate:protein2genome:local exon 846414 846817 . - . insertions 9 ; deletions 4 utg64_pilon exonerate:protein2genome:local splice5 846412 846413 . - . intron_id 2 ; splice_site "AC" utg64_pilon exonerate:protein2genome:local intron 833459 846413 . - . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 833459 833460 . - . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 832317 833458 . - . utg64_pilon exonerate:protein2genome:local exon 832317 833458 . - . insertions 6 ; deletions 7 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local splice5 832315 832316 . - . intron_id 3 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 766884 832316 . - . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 766884 766885 . - . intron_id 2 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 766874 766883 . - . utg64_pilon exonerate:protein2genome:local exon 766874 766883 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 766872 766873 . - . intron_id 4 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 587076 766873 . - . intron_id 4 utg64_pilon exonerate:protein2genome:local splice3 587076 587077 . - . intron_id 3 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 586958 587075 . - . utg64_pilon exonerate:protein2genome:local exon 586958 587075 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 586958 1026676 1812 - . alignment_id 0 ; Query GL50803_101074-t26_1-p1 ; Align 1026677 32 30 ; Align 1026647 43 213 ; Align 1026428 114 24 ; Align 1026398 122 93 ; Align 1026299 153 69 ; Align 846816 177 54 ; Align 846762 196 66 ; Align 846693 218 54 ; Align 846636 236 36 ; Align 846597 248 66 ; Align 846531 272 21 ; Align 846510 280 96 ; Align 833459 312 72 ; Align 833384 336 69 ; Align 833315 362 102 ; Align 833212 396 162 ; Align 833050 452 519 ; Align 832528 625 114 ; Align 832414 665 96 ; Align 766882 698 6 ; Align 587075 701 117 utg47_pilon exonerate:protein2genome:local gene 1744401 1744817 530 - . gene_id 0 ; sequence GL50803_10112-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1744401 1744817 . - . utg47_pilon exonerate:protein2genome:local exon 1744401 1744817 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1744401 1744817 530 - . alignment_id 0 ; Query GL50803_10112-t26_1-p1 ; Align 1744818 2 417 utg47_pilon exonerate:protein2genome:local gene 321337 324015 3330 - . gene_id 0 ; sequence GL50803_101120-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 321337 324015 . - . utg47_pilon exonerate:protein2genome:local exon 321337 324015 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 321337 324015 3330 - . alignment_id 0 ; Query GL50803_101120-t26_1-p1 ; Align 324016 1 2679 utg18_pilon exonerate:protein2genome:local gene 535610 535813 174 + . gene_id 0 ; sequence GL50803_101129-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 535610 535813 . + . utg18_pilon exonerate:protein2genome:local exon 535610 535813 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 535610 535813 174 + . alignment_id 0 ; Query GL50803_101129-t26_1-p1 ; Align 535610 1 204 utg18_pilon exonerate:protein2genome:local gene 503844 516012 19679 - . gene_id 0 ; sequence GL50803_101138-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 503844 516012 . - . utg18_pilon exonerate:protein2genome:local exon 503844 516012 . - . insertions 0 ; deletions 4 ; frameshifts 4 utg18_pilon exonerate:protein2genome:local similarity 503844 516012 19679 - . alignment_id 0 ; Query GL50803_101138-t26_1-p1 ; Align 516013 1105 264 ; Align 515749 1194 1899 ; Align 513850 1828 1131 ; Align 512717 2206 5808 ; Align 506907 4143 3063 utg18_pilon exonerate:protein2genome:local gene 466023 466235 218 - . gene_id 0 ; sequence GL50803_101152-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 466023 466235 . - . utg18_pilon exonerate:protein2genome:local exon 466023 466235 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 466023 466235 218 - . alignment_id 0 ; Query GL50803_101152-t26_1-p1 ; Align 466236 1 213 utg11_pilon exonerate:protein2genome:local gene 1389600 1392947 4622 - . gene_id 0 ; sequence GL50803_101168-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1389600 1392947 . - . utg11_pilon exonerate:protein2genome:local exon 1389600 1392947 . - . insertions 0 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 1389600 1392947 4622 - . alignment_id 0 ; Query GL50803_101168-t26_1-p1 ; Align 1392948 1 645 ; Align 1392303 218 69 ; Align 1392234 242 906 ; Align 1391328 545 234 ; Align 1391094 624 1494 utg11_pilon exonerate:protein2genome:local gene 1302249 1303415 1531 + . gene_id 0 ; sequence GL50803_101189-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1302249 1303415 . + . utg11_pilon exonerate:protein2genome:local exon 1302249 1303415 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1302249 1303415 1531 + . alignment_id 0 ; Query GL50803_101189-t26_1-p1 ; Align 1302249 1 1032 ; Align 1303281 346 135 utg11_pilon exonerate:protein2genome:local gene 1294155 1298399 5776 - . gene_id 0 ; sequence GL50803_101194-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1294155 1298399 . - . utg11_pilon exonerate:protein2genome:local exon 1294155 1298399 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1294155 1298399 5776 - . alignment_id 0 ; Query GL50803_101194-t26_1-p1 ; Align 1298400 1 1656 ; Align 1296744 554 2589 utg11_pilon exonerate:protein2genome:local gene 1249963 1255119 7110 + . gene_id 0 ; sequence GL50803_101212-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1249963 1255119 . + . utg11_pilon exonerate:protein2genome:local exon 1249963 1255119 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1249963 1255119 7110 + . alignment_id 0 ; Query GL50803_101212-t26_1-p1 ; Align 1249963 1 5157 utg265_pilon exonerate:protein2genome:local gene 322665 323117 439 + . gene_id 0 ; sequence GL50803_10122-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 322665 323117 . + . utg265_pilon exonerate:protein2genome:local exon 322665 323117 . + . insertions 3 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 322665 323117 439 + . alignment_id 0 ; Query GL50803_10122-t26_1-p1 ; Align 322665 4 99 ; Align 322767 37 147 ; Align 322914 90 204 utg731_pilon exonerate:protein2genome:local gene 391779 391976 160 + . gene_id 0 ; sequence GL50803_101249-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 391779 391976 . + . utg731_pilon exonerate:protein2genome:local exon 391779 391976 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 391779 391976 160 + . alignment_id 0 ; Query GL50803_101249-t26_1-p1 ; Align 391779 5 198 utg11_pilon exonerate:protein2genome:local gene 483402 568559 170 + . gene_id 0 ; sequence GL50803_10125-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 483402 483679 . + . utg11_pilon exonerate:protein2genome:local exon 483402 483679 . + . insertions 6 ; deletions 1 ; frameshifts 6 utg11_pilon exonerate:protein2genome:local splice5 483680 483681 . + . intron_id 1 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 483680 568313 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 568312 568313 . + . intron_id 0 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local cds 568314 568559 . + . utg11_pilon exonerate:protein2genome:local exon 568314 568559 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 483402 568559 170 + . alignment_id 0 ; Query GL50803_10125-t26_1-p1 ; Align 483402 4 42 ; Align 483444 19 87 ; Align 483534 48 27 ; Align 483565 57 24 ; Align 483592 65 42 ; Align 483636 79 42 ; Align 568315 94 81 ; Align 568398 121 162 utg11_pilon exonerate:protein2genome:local gene 1546721 1546885 229 + . gene_id 0 ; sequence GL50803_10126-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1546721 1546885 . + . utg11_pilon exonerate:protein2genome:local exon 1546721 1546885 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1546721 1546885 229 + . alignment_id 0 ; Query GL50803_10126-t26_1-p1 ; Align 1546721 1 165 utg308_pilon exonerate:protein2genome:local gene 538208 539954 2187 - . gene_id 0 ; sequence GL50803_101260-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 538208 539954 . - . utg308_pilon exonerate:protein2genome:local exon 538208 539954 . - . insertions 15 ; deletions 2 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 538208 539954 2187 - . alignment_id 0 ; Query GL50803_101260-t26_1-p1 ; Align 539955 1 255 ; Align 539694 86 114 ; Align 539579 124 255 ; Align 539324 211 570 ; Align 538745 401 537 utg308_pilon exonerate:protein2genome:local gene 550106 550348 173 - . gene_id 0 ; sequence GL50803_101264-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 550106 550348 . - . utg308_pilon exonerate:protein2genome:local exon 550106 550348 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 550106 550348 173 - . alignment_id 0 ; Query GL50803_101264-t26_1-p1 ; Align 550349 1 243 utg265_pilon exonerate:protein2genome:local gene 57955 61944 6684 - . gene_id 0 ; sequence GL50803_101278-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 57955 61944 . - . utg265_pilon exonerate:protein2genome:local exon 57955 61944 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 57955 61944 6684 - . alignment_id 0 ; Query GL50803_101278-t26_1-p1 ; Align 61945 1 3990 utg265_pilon exonerate:protein2genome:local gene 20538 21878 2372 + . gene_id 0 ; sequence GL50803_101291-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 20538 21878 . + . utg265_pilon exonerate:protein2genome:local exon 20538 21878 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 20538 21878 2372 + . alignment_id 0 ; Query GL50803_101291-t26_1-p1 ; Align 20538 1 1341 utg11_pilon exonerate:protein2genome:local gene 275806 276708 1150 + . gene_id 0 ; sequence GL50803_101307-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 275806 276708 . + . utg11_pilon exonerate:protein2genome:local exon 275806 276708 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 275806 276708 1150 + . alignment_id 0 ; Query GL50803_101307-t26_1-p1 ; Align 275806 7 381 ; Align 276187 135 522 utg11_pilon exonerate:protein2genome:local gene 254869 255378 527 - . gene_id 0 ; sequence GL50803_101309-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 254869 255378 . - . utg11_pilon exonerate:protein2genome:local exon 254869 255378 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 254869 255378 527 - . alignment_id 0 ; Query GL50803_101309-t26_1-p1 ; Align 255379 1 510 utg11_pilon exonerate:protein2genome:local gene 189829 190791 1294 - . gene_id 0 ; sequence GL50803_101326-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 189829 190791 . - . utg11_pilon exonerate:protein2genome:local exon 189829 190791 . - . insertions 9 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 189829 190791 1294 - . alignment_id 0 ; Query GL50803_101326-t26_1-p1 ; Align 190792 1 231 ; Align 190552 78 465 ; Align 190087 235 258 utg11_pilon exonerate:protein2genome:local gene 170129 171364 1602 + . gene_id 0 ; sequence GL50803_101330-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 170129 171364 . + . utg11_pilon exonerate:protein2genome:local exon 170129 171364 . + . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 170129 171364 1602 + . alignment_id 0 ; Query GL50803_101330-t26_1-p1 ; Align 170129 1 1176 ; Align 171311 393 54 utg18_pilon exonerate:protein2genome:local gene 246798 247442 967 - . gene_id 0 ; sequence GL50803_101339-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 246798 247442 . - . utg18_pilon exonerate:protein2genome:local exon 246798 247442 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 246798 247442 967 - . alignment_id 0 ; Query GL50803_101339-t26_1-p1 ; Align 247443 1 645 utg308_pilon exonerate:protein2genome:local gene 180816 181823 1382 - . gene_id 0 ; sequence GL50803_10136-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 180816 181823 . - . utg308_pilon exonerate:protein2genome:local exon 180816 181823 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 180816 181823 1382 - . alignment_id 0 ; Query GL50803_10136-t26_1-p1 ; Align 181824 1 1008 utg308_pilon exonerate:protein2genome:local gene 178540 180804 3572 + . gene_id 0 ; sequence GL50803_10137-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 178540 180804 . + . utg308_pilon exonerate:protein2genome:local exon 178540 180804 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 178540 180804 3572 + . alignment_id 0 ; Query GL50803_10137-t26_1-p1 ; Align 178540 1 1680 ; Align 180220 562 585 utg47_pilon exonerate:protein2genome:local gene 2299395 2299916 632 - . gene_id 0 ; sequence GL50803_101380-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2299395 2299916 . - . utg47_pilon exonerate:protein2genome:local exon 2299395 2299916 . - . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 2299395 2299916 632 - . alignment_id 0 ; Query GL50803_101380-t26_1-p1 ; Align 2299917 17 105 ; Align 2299812 53 39 ; Align 2299773 67 57 ; Align 2299716 87 210 ; Align 2299506 159 111 utg64_pilon exonerate:protein2genome:local gene 1025066 1025587 632 - . gene_id 0 ; sequence GL50803_101380-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1025066 1025587 . - . utg64_pilon exonerate:protein2genome:local exon 1025066 1025587 . - . insertions 0 ; deletions 5 utg64_pilon exonerate:protein2genome:local similarity 1025066 1025587 632 - . alignment_id 0 ; Query GL50803_101380-t26_1-p1 ; Align 1025588 17 105 ; Align 1025483 53 39 ; Align 1025444 67 57 ; Align 1025387 87 210 ; Align 1025177 159 111 utg308_pilon exonerate:protein2genome:local gene 176907 178220 2087 + . gene_id 0 ; sequence GL50803_10139-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 176907 178220 . + . utg308_pilon exonerate:protein2genome:local exon 176907 178220 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 176907 178220 2087 + . alignment_id 0 ; Query GL50803_10139-t26_1-p1 ; Align 176907 1 1314 utg349_pilon exonerate:protein2genome:local gene 1267527 1268558 1334 - . gene_id 0 ; sequence GL50803_101397-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1267527 1268558 . - . utg349_pilon exonerate:protein2genome:local exon 1267527 1268558 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1267527 1268558 1334 - . alignment_id 0 ; Query GL50803_101397-t26_1-p1 ; Align 1268559 1 453 ; Align 1268106 153 579 utg308_pilon exonerate:protein2genome:local gene 175214 176413 1832 - . gene_id 0 ; sequence GL50803_10141-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 175214 176413 . - . utg308_pilon exonerate:protein2genome:local exon 175214 176413 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 175214 176413 1832 - . alignment_id 0 ; Query GL50803_10141-t26_1-p1 ; Align 176414 1 1200 utg11_pilon exonerate:protein2genome:local gene 21511 271483 1461 - . gene_id 0 ; sequence GL50803_101410-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 271423 271483 . - . utg11_pilon exonerate:protein2genome:local exon 271423 271483 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 271421 271422 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 89251 271422 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 89251 89252 . - . intron_id 0 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local cds 87949 89250 . - . utg11_pilon exonerate:protein2genome:local exon 87949 89250 . - . insertions 12 ; deletions 2 utg11_pilon exonerate:protein2genome:local splice5 87947 87948 . - . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 21651 87948 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 21651 21652 . - . intron_id 1 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local cds 21511 21650 . - . utg11_pilon exonerate:protein2genome:local exon 21511 21650 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 21511 271483 1461 - . alignment_id 0 ; Query GL50803_101410-t26_1-p1 ; Align 271484 1 60 ; Align 89249 22 36 ; Align 89210 34 279 ; Align 88925 127 204 ; Align 88721 196 132 ; Align 88586 240 297 ; Align 88289 340 339 ; Align 21649 454 138 utg47_pilon exonerate:protein2genome:local gene 2023090 2061341 102 - . gene_id 0 ; sequence GL50803_101423-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2061225 2061341 . - . utg47_pilon exonerate:protein2genome:local exon 2061225 2061341 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 2061223 2061224 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 2024400 2061224 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 2024400 2024401 . - . intron_id 0 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 2024322 2024399 . - . utg47_pilon exonerate:protein2genome:local exon 2024322 2024399 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 2024320 2024321 . - . intron_id 2 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 2023768 2024321 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 2023768 2023769 . - . intron_id 1 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 2023649 2023767 . - . utg47_pilon exonerate:protein2genome:local exon 2023649 2023767 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 2023647 2023648 . - . intron_id 3 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 2023298 2023648 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 2023298 2023299 . - . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2023090 2023297 . - . utg47_pilon exonerate:protein2genome:local exon 2023090 2023297 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 2023090 2061341 102 - . alignment_id 0 ; Query GL50803_101423-t26_1-p1 ; Align 2061342 52 117 ; Align 2024400 91 78 ; Align 2023768 117 117 ; Align 2023297 157 120 ; Align 2023177 199 87 utg308_pilon exonerate:protein2genome:local gene 166307 168622 3304 - . gene_id 0 ; sequence GL50803_10145-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 166307 168622 . - . utg308_pilon exonerate:protein2genome:local exon 166307 168622 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 166307 168622 3304 - . alignment_id 0 ; Query GL50803_10145-t26_1-p1 ; Align 168623 1 2316 utg731_pilon exonerate:protein2genome:local gene 894315 895847 1802 - . gene_id 0 ; sequence GL50803_101450-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 894315 895847 . - . utg731_pilon exonerate:protein2genome:local exon 894315 895847 . - . insertions 3 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 894315 895847 1802 - . alignment_id 0 ; Query GL50803_101450-t26_1-p1 ; Align 895848 1 594 ; Align 895254 200 213 ; Align 895038 271 723 utg18_pilon exonerate:protein2genome:local gene 94599 187281 1004 - . gene_id 0 ; sequence GL50803_101451-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 187127 187281 . - . utg18_pilon exonerate:protein2genome:local exon 187127 187281 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 187125 187126 . - . intron_id 1 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 95206 187126 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 95206 95207 . - . intron_id 0 ; splice_site "GG" utg18_pilon exonerate:protein2genome:local cds 94599 95205 . - . utg18_pilon exonerate:protein2genome:local exon 94599 95205 . - . insertions 6 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 94599 187281 1004 - . alignment_id 0 ; Query GL50803_101451-t26_1-p1 ; Align 187282 1 153 ; Align 95205 53 12 ; Align 95190 57 273 ; Align 94917 149 204 ; Align 94710 217 111 utg308_pilon exonerate:protein2genome:local gene 161955 162941 1320 - . gene_id 0 ; sequence GL50803_10148-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 161955 162941 . - . utg308_pilon exonerate:protein2genome:local exon 161955 162941 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 161955 162941 1320 - . alignment_id 0 ; Query GL50803_10148-t26_1-p1 ; Align 162942 9 987 utg47_pilon exonerate:protein2genome:local gene 1352965 1353174 277 + . gene_id 0 ; sequence GL50803_101484-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1352965 1353174 . + . utg47_pilon exonerate:protein2genome:local exon 1352965 1353174 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1352965 1353174 277 + . alignment_id 0 ; Query GL50803_101484-t26_1-p1 ; Align 1352965 1 210 utg731_pilon exonerate:protein2genome:local gene 1343362 1481970 1071 + . gene_id 0 ; sequence GL50803_101496-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1343362 1343569 . + . utg731_pilon exonerate:protein2genome:local exon 1343362 1343569 . + . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1343570 1343571 . + . intron_id 1 ; splice_site "AC" utg731_pilon exonerate:protein2genome:local intron 1343570 1481032 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1481031 1481032 . + . intron_id 0 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local cds 1481033 1481970 . + . utg731_pilon exonerate:protein2genome:local exon 1481033 1481970 . + . insertions 9 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 1343362 1481970 1071 + . alignment_id 0 ; Query GL50803_101496-t26_1-p1 ; Align 1343362 99 18 ; Align 1343386 105 108 ; Align 1343497 141 72 ; Align 1481035 166 138 ; Align 1481179 212 384 ; Align 1481563 341 54 ; Align 1481617 360 66 ; Align 1481683 383 45 ; Align 1481728 400 126 ; Align 1481857 442 114 utg349_pilon exonerate:protein2genome:local gene 1102334 1224501 478 + . gene_id 0 ; sequence GL50803_101498-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1102334 1102609 . + . utg349_pilon exonerate:protein2genome:local exon 1102334 1102609 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1102610 1102611 . + . intron_id 1 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 1102610 1224309 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1224308 1224309 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1224310 1224501 . + . utg349_pilon exonerate:protein2genome:local exon 1224310 1224501 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1102334 1224501 478 + . alignment_id 0 ; Query GL50803_101498-t26_1-p1 ; Align 1102334 2 60 ; Align 1102394 23 216 ; Align 1224310 95 192 utg731_pilon exonerate:protein2genome:local gene 793744 795108 2294 + . gene_id 0 ; sequence GL50803_101501-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 793744 795108 . + . utg731_pilon exonerate:protein2genome:local exon 793744 795108 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 793744 795108 2294 + . alignment_id 0 ; Query GL50803_101501-t26_1-p1 ; Align 793744 1 1365 utg731_pilon exonerate:protein2genome:local gene 881995 882195 205 - . gene_id 0 ; sequence GL50803_101528-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 881995 882195 . - . utg731_pilon exonerate:protein2genome:local exon 881995 882195 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 881995 882195 205 - . alignment_id 0 ; Query GL50803_101528-t26_1-p1 ; Align 882196 3 201 utg265_pilon exonerate:protein2genome:local gene 871775 872623 877 - . gene_id 0 ; sequence GL50803_101534-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 871775 872623 . - . utg265_pilon exonerate:protein2genome:local exon 871775 872623 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 871775 872623 877 - . alignment_id 0 ; Query GL50803_101534-t26_1-p1 ; Align 872624 1 849 utg11_pilon exonerate:protein2genome:local gene 909334 1063461 1071 - . gene_id 0 ; sequence GL50803_101589-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1063351 1063461 . - . utg11_pilon exonerate:protein2genome:local exon 1063351 1063461 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1063349 1063350 . - . intron_id 1 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 939903 1063350 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 939903 939904 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 939111 939902 . - . utg11_pilon exonerate:protein2genome:local exon 939111 939902 . - . insertions 0 ; deletions 6 utg11_pilon exonerate:protein2genome:local splice5 939109 939110 . - . intron_id 2 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 909460 939110 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 909460 909461 . - . intron_id 1 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 909334 909459 . - . utg11_pilon exonerate:protein2genome:local exon 909334 909459 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 909334 1063461 1071 - . alignment_id 0 ; Query GL50803_101589-t26_1-p1 ; Align 1063462 46 33 ; Align 1063426 57 75 ; Align 939903 82 147 ; Align 939756 132 162 ; Align 939594 188 375 ; Align 939219 316 108 ; Align 909460 352 126 utg349_pilon exonerate:protein2genome:local gene 676262 678073 2753 + . gene_id 0 ; sequence GL50803_101594-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 676262 678073 . + . utg349_pilon exonerate:protein2genome:local exon 676262 678073 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 676262 678073 2753 + . alignment_id 0 ; Query GL50803_101594-t26_1-p1 ; Align 676262 1 1812 utg349_pilon exonerate:protein2genome:local gene 691328 691528 127 + . gene_id 0 ; sequence GL50803_101599-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 691328 691528 . + . utg349_pilon exonerate:protein2genome:local exon 691328 691528 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 691328 691528 127 + . alignment_id 0 ; Query GL50803_101599-t26_1-p1 ; Align 691328 1 201 utg731_pilon exonerate:protein2genome:local gene 407132 407338 218 - . gene_id 0 ; sequence GL50803_10160-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 407132 407338 . - . utg731_pilon exonerate:protein2genome:local exon 407132 407338 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 407132 407338 218 - . alignment_id 0 ; Query GL50803_10160-t26_1-p1 ; Align 407339 1 207 utg731_pilon exonerate:protein2genome:local gene 407025 409574 3231 + . gene_id 0 ; sequence GL50803_10161-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 407025 409574 . + . utg731_pilon exonerate:protein2genome:local exon 407025 409574 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 407025 409574 3231 + . alignment_id 0 ; Query GL50803_10161-t26_1-p1 ; Align 407025 1 2550 utg731_pilon exonerate:protein2genome:local gene 409781 411334 1833 + . gene_id 0 ; sequence GL50803_10162-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 409781 411334 . + . utg731_pilon exonerate:protein2genome:local exon 409781 411334 . + . insertions 0 ; deletions 8 utg731_pilon exonerate:protein2genome:local similarity 409781 411334 1833 + . alignment_id 0 ; Query GL50803_10162-t26_1-p1 ; Align 409781 1 273 ; Align 410054 93 57 ; Align 410111 114 417 ; Align 410528 256 87 ; Align 410615 287 720 utg308_pilon exonerate:protein2genome:local gene 273131 273376 160 + . gene_id 0 ; sequence GL50803_101652-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 273131 273376 . + . utg308_pilon exonerate:protein2genome:local exon 273131 273376 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 273131 273376 160 + . alignment_id 0 ; Query GL50803_101652-t26_1-p1 ; Align 273131 1 246 utg731_pilon exonerate:protein2genome:local gene 422498 422632 131 - . gene_id 0 ; sequence GL50803_10166-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 422498 422632 . - . utg731_pilon exonerate:protein2genome:local exon 422498 422632 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 422498 422632 131 - . alignment_id 0 ; Query GL50803_10166-t26_1-p1 ; Align 422633 1 135 utg731_pilon exonerate:protein2genome:local gene 422738 426310 5370 - . gene_id 0 ; sequence GL50803_10167-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 422738 426310 . - . utg731_pilon exonerate:protein2genome:local exon 422738 426310 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 422738 426310 5370 - . alignment_id 0 ; Query GL50803_10167-t26_1-p1 ; Align 426311 1 936 ; Align 425372 313 2634 utg11_pilon exonerate:protein2genome:local gene 1043123 1046293 4080 + . gene_id 0 ; sequence GL50803_101699-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1043123 1046293 . + . utg11_pilon exonerate:protein2genome:local exon 1043123 1046293 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1043123 1046293 4080 + . alignment_id 0 ; Query GL50803_101699-t26_1-p1 ; Align 1043123 1 3171 utg47_pilon exonerate:protein2genome:local gene 375318 467803 2291 - . gene_id 0 ; sequence GL50803_101739-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 466269 467803 . - . utg47_pilon exonerate:protein2genome:local exon 466269 467803 . - . insertions 3 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local splice5 466267 466268 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 375369 466268 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 375369 375370 . - . intron_id 0 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local cds 375318 375368 . - . utg47_pilon exonerate:protein2genome:local exon 375318 375368 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 375318 467803 2291 - . alignment_id 0 ; Query GL50803_101739-t26_1-p1 ; Align 467804 1 294 ; Align 467508 100 1230 ; Align 466275 510 6 ; Align 375369 512 51 utg64_pilon exonerate:protein2genome:local gene 944857 945051 240 - . gene_id 0 ; sequence GL50803_10176-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 944857 945051 . - . utg64_pilon exonerate:protein2genome:local exon 944857 945051 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 944857 945051 240 - . alignment_id 0 ; Query GL50803_10176-t26_1-p1 ; Align 945052 1 195 utg64_pilon exonerate:protein2genome:local gene 14666 486986 1748 + . gene_id 0 ; sequence GL50803_101765-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 14666 14786 . + . utg64_pilon exonerate:protein2genome:local exon 14666 14786 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 14787 14788 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 14787 192059 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 192058 192059 . + . intron_id 0 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local cds 192060 192116 . + . utg64_pilon exonerate:protein2genome:local exon 192060 192116 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 192117 192118 . + . intron_id 2 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 192117 374746 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 374745 374746 . + . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 374747 375292 . + . utg64_pilon exonerate:protein2genome:local exon 374747 375292 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 375293 375294 . + . intron_id 3 ; splice_site "CT" utg64_pilon exonerate:protein2genome:local intron 375293 375859 . + . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 375858 375859 . + . intron_id 2 ; splice_site "CG" utg64_pilon exonerate:protein2genome:local cds 375860 377064 . + . utg64_pilon exonerate:protein2genome:local exon 375860 377064 . + . insertions 18 ; deletions 2 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local splice5 377065 377066 . + . intron_id 4 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 377065 486804 . + . intron_id 4 utg64_pilon exonerate:protein2genome:local splice3 486803 486804 . + . intron_id 3 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 486805 486986 . + . utg64_pilon exonerate:protein2genome:local exon 486805 486986 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 14666 486986 1748 + . alignment_id 0 ; Query GL50803_101765-t26_1-p1 ; Align 14666 3 45 ; Align 14714 18 72 ; Align 192062 43 54 ; Align 374749 62 204 ; Align 374956 130 336 ; Align 375862 243 252 ; Align 376114 328 150 ; Align 376267 378 96 ; Align 376369 410 222 ; Align 376592 484 33 ; Align 376631 495 78 ; Align 376710 521 45 ; Align 376755 537 60 ; Align 376818 557 246 ; Align 486807 640 180 utg349_pilon exonerate:protein2genome:local gene 1323395 1323892 719 - . gene_id 0 ; sequence GL50803_101768-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1323395 1323892 . - . utg349_pilon exonerate:protein2genome:local exon 1323395 1323892 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1323395 1323892 719 - . alignment_id 0 ; Query GL50803_101768-t26_1-p1 ; Align 1323893 7 498 utg47_pilon exonerate:protein2genome:local gene 2012224 2014422 3009 + . gene_id 0 ; sequence GL50803_101805-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2012224 2014422 . + . utg47_pilon exonerate:protein2genome:local exon 2012224 2014422 . + . insertions 9 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2012224 2014422 3009 + . alignment_id 0 ; Query GL50803_101805-t26_1-p1 ; Align 2012224 18 276 ; Align 2012509 110 1914 utg64_pilon exonerate:protein2genome:local gene 936262 938535 3256 - . gene_id 0 ; sequence GL50803_10181-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 936262 938535 . - . utg64_pilon exonerate:protein2genome:local exon 936262 938535 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 936262 938535 3256 - . alignment_id 0 ; Query GL50803_10181-t26_1-p1 ; Align 938536 1 2274 utg47_pilon exonerate:protein2genome:local gene 1998441 2002736 6398 + . gene_id 0 ; sequence GL50803_101810-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1998441 2002736 . + . utg47_pilon exonerate:protein2genome:local exon 1998441 2002736 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1998441 2002736 6398 + . alignment_id 0 ; Query GL50803_101810-t26_1-p1 ; Align 1998441 1 4296 utg47_pilon exonerate:protein2genome:local gene 2003302 2003673 305 + . gene_id 0 ; sequence GL50803_101811-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2003302 2003673 . + . utg47_pilon exonerate:protein2genome:local exon 2003302 2003673 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2003302 2003673 305 + . alignment_id 0 ; Query GL50803_101811-t26_1-p1 ; Align 2003302 1 372 utg64_pilon exonerate:protein2genome:local gene 935753 936238 672 - . gene_id 0 ; sequence GL50803_10182-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 935753 936238 . - . utg64_pilon exonerate:protein2genome:local exon 935753 936238 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 935753 936238 672 - . alignment_id 0 ; Query GL50803_10182-t26_1-p1 ; Align 936239 1 486 utg99_pilon exonerate:protein2genome:local gene 108741 110975 2885 - . gene_id 0 ; sequence GL50803_101824-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 108741 110975 . - . utg99_pilon exonerate:protein2genome:local exon 108741 110975 . - . insertions 9 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 108741 110975 2885 - . alignment_id 0 ; Query GL50803_101824-t26_1-p1 ; Align 110976 1 1314 ; Align 109659 439 747 ; Align 108909 688 33 ; Align 108873 699 132 utg349_pilon exonerate:protein2genome:local gene 319099 320706 2237 + . gene_id 0 ; sequence GL50803_101832-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 319099 320706 . + . utg349_pilon exonerate:protein2genome:local exon 319099 320706 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 319099 320706 2237 + . alignment_id 0 ; Query GL50803_101832-t26_1-p1 ; Align 319099 1 1608 utg64_pilon exonerate:protein2genome:local gene 539269 540479 1987 - . gene_id 0 ; sequence GL50803_101850-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 539269 540479 . - . utg64_pilon exonerate:protein2genome:local exon 539269 540479 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 539269 540479 1987 - . alignment_id 0 ; Query GL50803_101850-t26_1-p1 ; Align 540480 1 843 ; Align 539635 283 366 utg308_pilon exonerate:protein2genome:local gene 799700 802129 2598 + . gene_id 0 ; sequence GL50803_101866-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 799700 802129 . + . utg308_pilon exonerate:protein2genome:local exon 799700 802129 . + . insertions 15 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 799700 802129 2598 + . alignment_id 0 ; Query GL50803_101866-t26_1-p1 ; Align 799700 1 1275 ; Align 800981 426 42 ; Align 801032 440 1098 utg265_pilon exonerate:protein2genome:local gene 753826 755616 2250 - . gene_id 0 ; sequence GL50803_101877-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 753826 755616 . - . utg265_pilon exonerate:protein2genome:local exon 753826 755616 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 753826 755616 2250 - . alignment_id 0 ; Query GL50803_101877-t26_1-p1 ; Align 755617 1 1155 ; Align 754462 387 636 utg64_pilon exonerate:protein2genome:local gene 930747 931034 283 - . gene_id 0 ; sequence GL50803_10189-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 930747 931034 . - . utg64_pilon exonerate:protein2genome:local exon 930747 931034 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 930747 931034 283 - . alignment_id 0 ; Query GL50803_10189-t26_1-p1 ; Align 931035 1 288 utg64_pilon exonerate:protein2genome:local gene 929622 931433 2487 + . gene_id 0 ; sequence GL50803_10190-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 929622 931433 . + . utg64_pilon exonerate:protein2genome:local exon 929622 931433 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 929622 931433 2487 + . alignment_id 0 ; Query GL50803_10190-t26_1-p1 ; Align 929622 1 1812 utg265_pilon exonerate:protein2genome:local gene 676109 677941 2468 - . gene_id 0 ; sequence GL50803_101904-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 676109 677941 . - . utg265_pilon exonerate:protein2genome:local exon 676109 677941 . - . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 676109 677941 2468 - . alignment_id 0 ; Query GL50803_101904-t26_1-p1 ; Align 677942 1 1266 ; Align 676676 425 567 utg265_pilon exonerate:protein2genome:local gene 673654 675015 2069 - . gene_id 0 ; sequence GL50803_101906-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 673654 675015 . - . utg265_pilon exonerate:protein2genome:local exon 673654 675015 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 673654 675015 2069 - . alignment_id 0 ; Query GL50803_101906-t26_1-p1 ; Align 675016 1 1362 utg349_pilon exonerate:protein2genome:local gene 256153 257099 1478 - . gene_id 0 ; sequence GL50803_101918-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 256153 257099 . - . utg349_pilon exonerate:protein2genome:local exon 256153 257099 . - . insertions 0 ; deletions 4 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 256153 257099 1478 - . alignment_id 0 ; Query GL50803_101918-t26_1-p1 ; Align 257100 1 219 ; Align 256879 75 669 ; Align 256210 301 57 utg349_pilon exonerate:protein2genome:local gene 258126 258859 1186 + . gene_id 0 ; sequence GL50803_101919-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 258126 258859 . + . utg349_pilon exonerate:protein2genome:local exon 258126 258859 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 258126 258859 1186 + . alignment_id 0 ; Query GL50803_101919-t26_1-p1 ; Align 258126 1 573 ; Align 258701 193 159 utg64_pilon exonerate:protein2genome:local gene 928969 929385 587 + . gene_id 0 ; sequence GL50803_10192-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 928969 929385 . + . utg64_pilon exonerate:protein2genome:local exon 928969 929385 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 928969 929385 587 + . alignment_id 0 ; Query GL50803_10192-t26_1-p1 ; Align 928969 1 417 utg64_pilon exonerate:protein2genome:local gene 925924 928803 4153 + . gene_id 0 ; sequence GL50803_10193-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 925924 928803 . + . utg64_pilon exonerate:protein2genome:local exon 925924 928803 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 925924 928803 4153 + . alignment_id 0 ; Query GL50803_10193-t26_1-p1 ; Align 925924 1 2880 utg64_pilon exonerate:protein2genome:local gene 925571 925894 343 - . gene_id 0 ; sequence GL50803_10194-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 925571 925894 . - . utg64_pilon exonerate:protein2genome:local exon 925571 925894 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 925571 925894 343 - . alignment_id 0 ; Query GL50803_10194-t26_1-p1 ; Align 925895 1 324 utg11_pilon exonerate:protein2genome:local gene 540924 541526 915 + . gene_id 0 ; sequence GL50803_101943-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 540924 541526 . + . utg11_pilon exonerate:protein2genome:local exon 540924 541526 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 540924 541526 915 + . alignment_id 0 ; Query GL50803_101943-t26_1-p1 ; Align 540924 1 603 utg265_pilon exonerate:protein2genome:local gene 108658 113147 5006 - . gene_id 0 ; sequence GL50803_101948-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 108658 113147 . - . utg265_pilon exonerate:protein2genome:local exon 108658 113147 . - . insertions 0 ; deletions 3 ; frameshifts 8 utg265_pilon exonerate:protein2genome:local similarity 108658 113147 5006 - . alignment_id 0 ; Query GL50803_101948-t26_1-p1 ; Align 113148 1264 261 ; Align 112887 1352 1221 ; Align 111665 1759 549 ; Align 111114 1943 123 ; Align 110990 1984 720 ; Align 110268 2225 369 ; Align 109897 2348 1239 utg265_pilon exonerate:protein2genome:local gene 138612 140911 3380 + . gene_id 0 ; sequence GL50803_101955-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 138612 140911 . + . utg265_pilon exonerate:protein2genome:local exon 138612 140911 . + . insertions 6 ; deletions 0 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 138612 140911 3380 + . alignment_id 0 ; Query GL50803_101955-t26_1-p1 ; Align 138612 1 450 ; Align 139068 151 876 ; Align 139946 443 966 utg64_pilon exonerate:protein2genome:local gene 925029 925520 686 - . gene_id 0 ; sequence GL50803_10196-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 925029 925520 . - . utg64_pilon exonerate:protein2genome:local exon 925029 925520 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 925029 925520 686 - . alignment_id 0 ; Query GL50803_10196-t26_1-p1 ; Align 925521 1 492 utg364_pilon exonerate:protein2genome:local gene 53924 54196 246 + . gene_id 0 ; sequence GL50803_101990-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 53924 54196 . + . utg364_pilon exonerate:protein2genome:local exon 53924 54196 . + . insertions 0 ; deletions 3 utg364_pilon exonerate:protein2genome:local similarity 53924 54196 246 + . alignment_id 0 ; Query GL50803_101990-t26_1-p1 ; Align 53924 1 129 ; Align 54053 47 144 utg265_pilon exonerate:protein2genome:local gene 896616 898088 1706 - . gene_id 0 ; sequence GL50803_101994-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 896616 898088 . - . utg265_pilon exonerate:protein2genome:local exon 896616 898088 . - . insertions 27 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 896616 898088 1706 - . alignment_id 0 ; Query GL50803_101994-t26_1-p1 ; Align 898089 344 411 ; Align 897678 482 93 ; Align 897570 513 33 ; Align 897531 524 297 ; Align 897228 623 429 ; Align 896799 769 183 utg265_pilon exonerate:protein2genome:local gene 838535 838744 267 - . gene_id 0 ; sequence GL50803_102012-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 838535 838744 . - . utg265_pilon exonerate:protein2genome:local exon 838535 838744 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 838535 838744 267 - . alignment_id 0 ; Query GL50803_102012-t26_1-p1 ; Align 838745 3 210 utg47_pilon exonerate:protein2genome:local gene 72926 75163 2989 - . gene_id 0 ; sequence GL50803_102022-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 72926 75163 . - . utg47_pilon exonerate:protein2genome:local exon 72926 75163 . - . insertions 15 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 72926 75163 2989 - . alignment_id 0 ; Query GL50803_102022-t26_1-p1 ; Align 75164 1 2019 ; Align 73130 674 114 ; Align 73016 713 90 utg47_pilon exonerate:protein2genome:local gene 69754 72264 3978 + . gene_id 0 ; sequence GL50803_102023-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 69754 72264 . + . utg47_pilon exonerate:protein2genome:local exon 69754 72264 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 69754 72264 3978 + . alignment_id 0 ; Query GL50803_102023-t26_1-p1 ; Align 69754 1 2511 utg47_pilon exonerate:protein2genome:local gene 699803 702733 4269 - . gene_id 0 ; sequence GL50803_102034-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 699803 702733 . - . utg47_pilon exonerate:protein2genome:local exon 699803 702733 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 699803 702733 4269 - . alignment_id 0 ; Query GL50803_102034-t26_1-p1 ; Align 702734 1 651 ; Align 702083 219 2280 utg47_pilon exonerate:protein2genome:local gene 664165 666117 2923 - . gene_id 0 ; sequence GL50803_102051-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 664165 666117 . - . utg47_pilon exonerate:protein2genome:local exon 664165 666117 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 664165 666117 2923 - . alignment_id 0 ; Query GL50803_102051-t26_1-p1 ; Align 666118 1 1953 utg47_pilon exonerate:protein2genome:local gene 653481 659692 9014 - . gene_id 0 ; sequence GL50803_102056-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 653481 659692 . - . utg47_pilon exonerate:protein2genome:local exon 653481 659692 . - . insertions 0 ; deletions 8 ; frameshifts 5 utg47_pilon exonerate:protein2genome:local similarity 653481 659692 9014 - . alignment_id 0 ; Query GL50803_102056-t26_1-p1 ; Align 659693 1 1389 ; Align 658303 464 9 ; Align 658294 468 327 ; Align 657965 578 354 ; Align 657611 697 1248 ; Align 656363 1116 354 ; Align 656007 1235 300 ; Align 655707 1336 2226 utg349_pilon exonerate:protein2genome:local gene 1478819 1479034 163 + . gene_id 0 ; sequence GL50803_102061-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1478819 1479034 . + . utg349_pilon exonerate:protein2genome:local exon 1478819 1479034 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1478819 1479034 163 + . alignment_id 0 ; Query GL50803_102061-t26_1-p1 ; Align 1478819 1 216 utg349_pilon exonerate:protein2genome:local gene 1510797 1511039 172 - . gene_id 0 ; sequence GL50803_102070-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1510797 1511039 . - . utg349_pilon exonerate:protein2genome:local exon 1510797 1511039 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1510797 1511039 172 - . alignment_id 0 ; Query GL50803_102070-t26_1-p1 ; Align 1511040 3 243 utg349_pilon exonerate:protein2genome:local gene 1509960 1512842 3466 + . gene_id 0 ; sequence GL50803_102071-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1509960 1512842 . + . utg349_pilon exonerate:protein2genome:local exon 1509960 1512842 . + . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 1509960 1512842 3466 + . alignment_id 0 ; Query GL50803_102071-t26_1-p1 ; Align 1509960 1 2031 ; Align 1511991 681 852 utg11_pilon exonerate:protein2genome:local gene 831447 831704 196 - . gene_id 0 ; sequence GL50803_102096-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 831447 831704 . - . utg11_pilon exonerate:protein2genome:local exon 831447 831704 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 831447 831704 196 - . alignment_id 0 ; Query GL50803_102096-t26_1-p1 ; Align 831705 1 258 utg11_pilon exonerate:protein2genome:local gene 790758 793823 4785 + . gene_id 0 ; sequence GL50803_102101-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 790758 793823 . + . utg11_pilon exonerate:protein2genome:local exon 790758 793823 . + . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 790758 793823 4785 + . alignment_id 0 ; Query GL50803_102101-t26_1-p1 ; Align 790758 1 336 ; Align 791094 115 807 ; Align 791901 386 1923 utg11_pilon exonerate:protein2genome:local gene 814385 819986 9072 + . gene_id 0 ; sequence GL50803_102108-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 814385 819986 . + . utg11_pilon exonerate:protein2genome:local exon 814385 819986 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 814385 819986 9072 + . alignment_id 0 ; Query GL50803_102108-t26_1-p1 ; Align 814385 1 3081 ; Align 817467 1028 2520 utg11_pilon exonerate:protein2genome:local gene 785747 787950 2412 - . gene_id 0 ; sequence GL50803_102110-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 785747 787950 . - . utg11_pilon exonerate:protein2genome:local exon 785747 787950 . - . insertions 3 ; deletions 4 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 785747 787950 2412 - . alignment_id 0 ; Query GL50803_102110-t26_1-p1 ; Align 787951 1 273 ; Align 787678 96 123 ; Align 787552 137 105 ; Align 787446 172 555 ; Align 786890 357 1143 utg47_pilon exonerate:protein2genome:local gene 2125028 2125402 503 + . gene_id 0 ; sequence GL50803_102141-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2125028 2125402 . + . utg47_pilon exonerate:protein2genome:local exon 2125028 2125402 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2125028 2125402 503 + . alignment_id 0 ; Query GL50803_102141-t26_1-p1 ; Align 2125028 1 375 utg47_pilon exonerate:protein2genome:local gene 2124244 2124480 218 - . gene_id 0 ; sequence GL50803_102142-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2124244 2124480 . - . utg47_pilon exonerate:protein2genome:local exon 2124244 2124480 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2124244 2124480 218 - . alignment_id 0 ; Query GL50803_102142-t26_1-p1 ; Align 2124481 8 237 utg64_pilon exonerate:protein2genome:local gene 697710 698618 1351 + . gene_id 0 ; sequence GL50803_10217-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 697710 698618 . + . utg64_pilon exonerate:protein2genome:local exon 697710 698618 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 697710 698618 1351 + . alignment_id 0 ; Query GL50803_10217-t26_1-p1 ; Align 697710 1 909 utg11_pilon exonerate:protein2genome:local gene 1195419 1196174 1122 + . gene_id 0 ; sequence GL50803_102170-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1195419 1196174 . + . utg11_pilon exonerate:protein2genome:local exon 1195419 1196174 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1195419 1196174 1122 + . alignment_id 0 ; Query GL50803_102170-t26_1-p1 ; Align 1195419 1 756 utg265_pilon exonerate:protein2genome:local gene 658649 658984 361 - . gene_id 0 ; sequence GL50803_102178-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 658649 658984 . - . utg265_pilon exonerate:protein2genome:local exon 658649 658984 . - . insertions 3 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 658649 658984 361 - . alignment_id 0 ; Query GL50803_102178-t26_1-p1 ; Align 658985 17 195 ; Align 658787 82 36 ; Align 658751 95 102 utg64_pilon exonerate:protein2genome:local gene 698678 699262 825 + . gene_id 0 ; sequence GL50803_10218-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 698678 699262 . + . utg64_pilon exonerate:protein2genome:local exon 698678 699262 . + . insertions 0 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 698678 699262 825 + . alignment_id 0 ; Query GL50803_10218-t26_1-p1 ; Align 698678 1 111 ; Align 698789 41 474 utg47_pilon exonerate:protein2genome:local gene 1917459 1918130 757 - . gene_id 0 ; sequence GL50803_102180-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1917459 1918130 . - . utg47_pilon exonerate:protein2genome:local exon 1917459 1918130 . - . insertions 9 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1917459 1918130 757 - . alignment_id 0 ; Query GL50803_102180-t26_1-p1 ; Align 1918131 4 213 ; Align 1917915 75 396 ; Align 1917513 207 54 utg64_pilon exonerate:protein2genome:local gene 30180 37796 11031 + . gene_id 0 ; sequence GL50803_102184-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 30180 37796 . + . utg64_pilon exonerate:protein2genome:local exon 30180 37796 . + . insertions 6 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 30180 37796 11031 + . alignment_id 0 ; Query GL50803_102184-t26_1-p1 ; Align 30180 1 3957 ; Align 34137 1321 1068 ; Align 35211 1677 1647 ; Align 36858 2227 225 ; Align 37083 2304 714 utg64_pilon exonerate:protein2genome:local gene 699276 703610 5970 + . gene_id 0 ; sequence GL50803_10219-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 699276 700668 . + . utg64_pilon exonerate:protein2genome:local exon 699276 700668 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 700669 700670 . + . intron_id 1 ; splice_site "TT" utg64_pilon exonerate:protein2genome:local intron 700669 700716 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 700715 700716 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 700717 703610 . + . utg64_pilon exonerate:protein2genome:local exon 700717 703610 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 699276 703610 5970 + . alignment_id 0 ; Query GL50803_10219-t26_1-p1 ; Align 699276 1 1392 ; Align 700719 466 2892 utg64_pilon exonerate:protein2genome:local gene 704127 705113 1312 + . gene_id 0 ; sequence GL50803_10221-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 704127 705113 . + . utg64_pilon exonerate:protein2genome:local exon 704127 705113 . + . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 704127 705113 1312 + . alignment_id 0 ; Query GL50803_10221-t26_1-p1 ; Align 704127 1 426 ; Align 704553 145 561 utg64_pilon exonerate:protein2genome:local gene 16061 92256 577 + . gene_id 0 ; sequence GL50803_102230-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 16061 16331 . + . utg64_pilon exonerate:protein2genome:local exon 16061 16331 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 16332 16333 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 16332 91779 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 91778 91779 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 91780 92256 . + . utg64_pilon exonerate:protein2genome:local exon 91780 92256 . + . insertions 3 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 16061 92256 577 + . alignment_id 0 ; Query GL50803_102230-t26_1-p1 ; Align 16061 38 129 ; Align 16193 81 138 ; Align 91782 128 246 ; Align 92031 210 90 ; Align 92122 240 135 utg308_pilon exonerate:protein2genome:local gene 22599 22805 196 + . gene_id 0 ; sequence GL50803_102245-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 22599 22805 . + . utg308_pilon exonerate:protein2genome:local exon 22599 22805 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 22599 22805 196 + . alignment_id 0 ; Query GL50803_102245-t26_1-p1 ; Align 22599 1 207 utg308_pilon exonerate:protein2genome:local gene 47948 51013 4818 + . gene_id 0 ; sequence GL50803_102248-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 47948 51013 . + . utg308_pilon exonerate:protein2genome:local exon 47948 51013 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 47948 51013 4818 + . alignment_id 0 ; Query GL50803_102248-t26_1-p1 ; Align 47948 1 3066 utg308_pilon exonerate:protein2genome:local gene 72359 72568 195 + . gene_id 0 ; sequence GL50803_102256-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 72359 72568 . + . utg308_pilon exonerate:protein2genome:local exon 72359 72568 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 72359 72568 195 + . alignment_id 0 ; Query GL50803_102256-t26_1-p1 ; Align 72359 1 210 utg308_pilon exonerate:protein2genome:local gene 112275 113264 1370 - . gene_id 0 ; sequence GL50803_102263-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 112275 113264 . - . utg308_pilon exonerate:protein2genome:local exon 112275 113264 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 112275 113264 1370 - . alignment_id 0 ; Query GL50803_102263-t26_1-p1 ; Align 113265 1 990 utg731_pilon exonerate:protein2genome:local gene 127497 129146 2155 - . gene_id 0 ; sequence GL50803_10229-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 127497 129146 . - . utg731_pilon exonerate:protein2genome:local exon 127497 129146 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 127497 129146 2155 - . alignment_id 0 ; Query GL50803_10229-t26_1-p1 ; Align 129147 23 33 ; Align 129114 35 1617 utg64_pilon exonerate:protein2genome:local gene 237592 237810 190 - . gene_id 0 ; sequence GL50803_102303-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 237592 237810 . - . utg64_pilon exonerate:protein2genome:local exon 237592 237810 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 237592 237810 190 - . alignment_id 0 ; Query GL50803_102303-t26_1-p1 ; Align 237811 1 219 utg731_pilon exonerate:protein2genome:local gene 129173 130849 2646 - . gene_id 0 ; sequence GL50803_10231-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 129173 130849 . - . utg731_pilon exonerate:protein2genome:local exon 129173 130849 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 129173 130849 2646 - . alignment_id 0 ; Query GL50803_10231-t26_1-p1 ; Align 130850 1 1677 utg731_pilon exonerate:protein2genome:local gene 130923 132926 2787 - . gene_id 0 ; sequence GL50803_10232-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 130923 132926 . - . utg731_pilon exonerate:protein2genome:local exon 130923 132926 . - . insertions 3 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 130923 132926 2787 - . alignment_id 0 ; Query GL50803_10232-t26_1-p1 ; Align 132927 1 1038 ; Align 131889 349 729 ; Align 131157 592 234 utg47_pilon exonerate:protein2genome:local gene 1903419 1906103 4312 - . gene_id 0 ; sequence GL50803_102322-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1903419 1906103 . - . utg47_pilon exonerate:protein2genome:local exon 1903419 1906103 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1903419 1906103 4312 - . alignment_id 0 ; Query GL50803_102322-t26_1-p1 ; Align 1906104 1 393 ; Align 1905711 135 2292 utg11_pilon exonerate:protein2genome:local gene 965784 966086 259 - . gene_id 0 ; sequence GL50803_102340-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 965784 966086 . - . utg11_pilon exonerate:protein2genome:local exon 965784 966086 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 965784 966086 259 - . alignment_id 0 ; Query GL50803_102340-t26_1-p1 ; Align 966087 1 303 utg731_pilon exonerate:protein2genome:local gene 42386 143578 3252 - . gene_id 0 ; sequence GL50803_10238-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 140672 143578 . - . utg731_pilon exonerate:protein2genome:local exon 140672 143578 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 140670 140671 . - . intron_id 1 ; splice_site "GC" utg731_pilon exonerate:protein2genome:local intron 42428 140671 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 42428 42429 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 42386 42427 . - . utg731_pilon exonerate:protein2genome:local exon 42386 42427 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 42386 143578 3252 - . alignment_id 0 ; Query GL50803_10238-t26_1-p1 ; Align 143579 1 2907 ; Align 42428 970 42 utg731_pilon exonerate:protein2genome:local gene 144107 145195 1157 - . gene_id 0 ; sequence GL50803_10239-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 144107 145195 . - . utg731_pilon exonerate:protein2genome:local exon 144107 145195 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 144107 145195 1157 - . alignment_id 0 ; Query GL50803_10239-t26_1-p1 ; Align 145196 1 237 ; Align 144959 81 474 ; Align 144485 240 378 utg731_pilon exonerate:protein2genome:local gene 150785 151622 905 + . gene_id 0 ; sequence GL50803_10241-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 150785 151622 . + . utg731_pilon exonerate:protein2genome:local exon 150785 151622 . + . insertions 0 ; deletions 5 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 150785 151622 905 + . alignment_id 0 ; Query GL50803_10241-t26_1-p1 ; Align 150785 1 555 ; Align 151340 190 30 ; Align 151370 201 186 ; Align 151557 263 66 utg47_pilon exonerate:protein2genome:local gene 137976 138218 168 - . gene_id 0 ; sequence GL50803_102423-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 137976 138218 . - . utg47_pilon exonerate:protein2genome:local exon 137976 138218 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 137976 138218 168 - . alignment_id 0 ; Query GL50803_102423-t26_1-p1 ; Align 138219 1 243 utg47_pilon exonerate:protein2genome:local gene 230374 232716 3197 - . gene_id 0 ; sequence GL50803_102438-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 230374 232716 . - . utg47_pilon exonerate:protein2genome:local exon 230374 232716 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 230374 232716 3197 - . alignment_id 0 ; Query GL50803_102438-t26_1-p1 ; Align 232717 1 1227 ; Align 231490 411 1116 utg47_pilon exonerate:protein2genome:local gene 248286 248501 201 - . gene_id 0 ; sequence GL50803_102442-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 248286 248501 . - . utg47_pilon exonerate:protein2genome:local exon 248286 248501 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 248286 248501 201 - . alignment_id 0 ; Query GL50803_102442-t26_1-p1 ; Align 248502 1 216 utg11_pilon exonerate:protein2genome:local gene 707682 708101 362 - . gene_id 0 ; sequence GL50803_102444-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 707682 708101 . - . utg11_pilon exonerate:protein2genome:local exon 707682 708101 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 707682 708101 362 - . alignment_id 0 ; Query GL50803_102444-t26_1-p1 ; Align 708102 64 420 utg11_pilon exonerate:protein2genome:local gene 1073584 1077162 5355 - . gene_id 0 ; sequence GL50803_102455-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1073584 1077162 . - . utg11_pilon exonerate:protein2genome:local exon 1073584 1077162 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1073584 1077162 5355 - . alignment_id 0 ; Query GL50803_102455-t26_1-p1 ; Align 1077163 1 1827 ; Align 1075336 611 1752 utg47_pilon exonerate:protein2genome:local gene 1013250 1020029 7855 + . gene_id 0 ; sequence GL50803_102461-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1013250 1020029 . + . utg47_pilon exonerate:protein2genome:local exon 1013250 1020029 . + . insertions 3 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 1013250 1020029 7855 + . alignment_id 0 ; Query GL50803_102461-t26_1-p1 ; Align 1013250 1 1194 ; Align 1014444 401 3069 ; Align 1017513 1425 546 ; Align 1018062 1607 969 ; Align 1019031 1932 999 utg64_pilon exonerate:protein2genome:local gene 642071 642307 212 - . gene_id 0 ; sequence GL50803_102476-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 642071 642307 . - . utg64_pilon exonerate:protein2genome:local exon 642071 642307 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 642071 642307 212 - . alignment_id 0 ; Query GL50803_102476-t26_1-p1 ; Align 642308 10 237 utg64_pilon exonerate:protein2genome:local gene 640016 640270 224 - . gene_id 0 ; sequence GL50803_102477-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 640016 640270 . - . utg64_pilon exonerate:protein2genome:local exon 640016 640270 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 640016 640270 224 - . alignment_id 0 ; Query GL50803_102477-t26_1-p1 ; Align 640271 1 255 utg731_pilon exonerate:protein2genome:local gene 416714 421381 5477 + . gene_id 0 ; sequence GL50803_102515-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 416714 421381 . + . utg731_pilon exonerate:protein2genome:local exon 416714 421381 . + . insertions 18 ; deletions 6 utg731_pilon exonerate:protein2genome:local similarity 416714 421381 5477 + . alignment_id 0 ; Query GL50803_102515-t26_1-p1 ; Align 416714 1 819 ; Align 417536 274 738 ; Align 418286 520 675 ; Align 418961 746 492 ; Align 419453 911 609 ; Align 420065 1114 75 ; Align 420140 1141 1101 ; Align 421241 1510 141 utg64_pilon exonerate:protein2genome:local gene 182610 185012 3821 + . gene_id 0 ; sequence GL50803_10254-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 182610 185012 . + . utg64_pilon exonerate:protein2genome:local exon 182610 185012 . + . insertions 0 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 182610 185012 3821 + . alignment_id 0 ; Query GL50803_10254-t26_1-p1 ; Align 182610 1 1011 ; Align 183621 341 1392 utg212_pilon exonerate:protein2genome:local gene 14297 115880 371 + . gene_id 0 ; sequence GL50803_102540-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14297 14449 . + . utg212_pilon exonerate:protein2genome:local exon 14297 14449 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 14450 14451 . + . intron_id 1 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local intron 14450 115739 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115738 115739 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115740 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115740 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14297 115880 371 + . alignment_id 0 ; Query GL50803_102540-t26_1-p1 ; Align 14297 1 153 ; Align 115740 52 141 utg99_pilon exonerate:protein2genome:local gene 55946 157247 1678 - . gene_id 0 ; sequence GL50803_102542-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 156170 157247 . - . utg99_pilon exonerate:protein2genome:local exon 156170 157247 . - . insertions 15 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 156168 156169 . - . intron_id 1 ; splice_site "AT" utg99_pilon exonerate:protein2genome:local intron 155771 156169 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 155771 155772 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 155174 155770 . - . utg99_pilon exonerate:protein2genome:local exon 155174 155770 . - . insertions 3 ; deletions 4 utg99_pilon exonerate:protein2genome:local splice5 155172 155173 . - . intron_id 2 ; splice_site "CT" utg99_pilon exonerate:protein2genome:local intron 154194 155173 . - . intron_id 2 utg99_pilon exonerate:protein2genome:local splice3 154194 154195 . - . intron_id 1 ; splice_site "TG" utg99_pilon exonerate:protein2genome:local cds 154038 154193 . - . utg99_pilon exonerate:protein2genome:local exon 154038 154193 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 154036 154037 . - . intron_id 3 ; splice_site "CT" utg99_pilon exonerate:protein2genome:local intron 56224 154037 . - . intron_id 3 utg99_pilon exonerate:protein2genome:local splice3 56224 56225 . - . intron_id 2 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 55946 56223 . - . utg99_pilon exonerate:protein2genome:local exon 55946 56223 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 55946 157247 1678 - . alignment_id 0 ; Query GL50803_102542-t26_1-p1 ; Align 157248 66 486 ; Align 156747 228 576 ; Align 155769 421 159 ; Align 155610 478 168 ; Align 155439 534 264 ; Align 154192 623 153 ; Align 56222 675 276 utg64_pilon exonerate:protein2genome:local gene 181278 182450 1880 + . gene_id 0 ; sequence GL50803_10255-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 181278 182450 . + . utg64_pilon exonerate:protein2genome:local exon 181278 182450 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 181278 182450 1880 + . alignment_id 0 ; Query GL50803_10255-t26_1-p1 ; Align 181278 1 1173 utg64_pilon exonerate:protein2genome:local gene 180495 181088 768 - . gene_id 0 ; sequence GL50803_10256-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 180495 181088 . - . utg64_pilon exonerate:protein2genome:local exon 180495 181088 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 180495 181088 768 - . alignment_id 0 ; Query GL50803_10256-t26_1-p1 ; Align 181089 1 594 utg11_pilon exonerate:protein2genome:local gene 1175232 1176737 1911 - . gene_id 0 ; sequence GL50803_102575-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1175232 1176737 . - . utg11_pilon exonerate:protein2genome:local exon 1175232 1176737 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1175232 1176737 1911 - . alignment_id 0 ; Query GL50803_102575-t26_1-p1 ; Align 1176738 1 1506 utg64_pilon exonerate:protein2genome:local gene 173135 175369 3546 - . gene_id 0 ; sequence GL50803_10260-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 173135 175369 . - . utg64_pilon exonerate:protein2genome:local exon 173135 175369 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 173135 175369 3546 - . alignment_id 0 ; Query GL50803_10260-t26_1-p1 ; Align 175370 1 2235 utg64_pilon exonerate:protein2genome:local gene 171543 173084 2303 - . gene_id 0 ; sequence GL50803_10261-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 171543 173084 . - . utg64_pilon exonerate:protein2genome:local exon 171543 173084 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 171543 173084 2303 - . alignment_id 0 ; Query GL50803_10261-t26_1-p1 ; Align 173085 1 1110 ; Align 171975 372 432 utg731_pilon exonerate:protein2genome:local gene 338550 338858 255 + . gene_id 0 ; sequence GL50803_102617-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 338550 338858 . + . utg731_pilon exonerate:protein2genome:local exon 338550 338858 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 338550 338858 255 + . alignment_id 0 ; Query GL50803_102617-t26_1-p1 ; Align 338550 1 309 utg731_pilon exonerate:protein2genome:local gene 332834 333142 255 - . gene_id 0 ; sequence GL50803_102617-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 332834 333142 . - . utg731_pilon exonerate:protein2genome:local exon 332834 333142 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 332834 333142 255 - . alignment_id 0 ; Query GL50803_102617-t26_1-p1 ; Align 333143 1 309 utg308_pilon exonerate:protein2genome:local gene 430598 432613 3136 + . gene_id 0 ; sequence GL50803_102647-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 430598 432613 . + . utg308_pilon exonerate:protein2genome:local exon 430598 432613 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 430598 432613 3136 + . alignment_id 0 ; Query GL50803_102647-t26_1-p1 ; Align 430598 1 2016 utg265_pilon exonerate:protein2genome:local gene 573170 580524 8391 + . gene_id 0 ; sequence GL50803_102654-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 573170 580524 . + . utg265_pilon exonerate:protein2genome:local exon 573170 580524 . + . insertions 21 ; deletions 6 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 573170 580524 8391 + . alignment_id 0 ; Query GL50803_102654-t26_1-p1 ; Align 573170 1 2430 ; Align 575600 813 1725 ; Align 577331 1388 210 ; Align 577544 1458 48 ; Align 577598 1474 1032 ; Align 578630 1820 54 ; Align 578686 1839 66 ; Align 578755 1861 1293 ; Align 580051 2292 93 ; Align 580144 2324 381 utg47_pilon exonerate:protein2genome:local gene 1699424 2021908 1326 - . gene_id 0 ; sequence GL50803_102662-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2021388 2021908 . - . utg47_pilon exonerate:protein2genome:local exon 2021388 2021908 . - . insertions 9 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local splice5 2021386 2021387 . - . intron_id 1 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local intron 1957391 2021387 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1957391 1957392 . - . intron_id 0 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 1957261 1957390 . - . utg47_pilon exonerate:protein2genome:local exon 1957261 1957390 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1957259 1957260 . - . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1838530 1957260 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1838530 1838531 . - . intron_id 1 ; splice_site "CA" utg47_pilon exonerate:protein2genome:local cds 1838000 1838529 . - . utg47_pilon exonerate:protein2genome:local exon 1838000 1838529 . - . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local splice5 1837998 1837999 . - . intron_id 3 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1699726 1837999 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 1699726 1699727 . - . intron_id 2 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1699424 1699725 . - . utg47_pilon exonerate:protein2genome:local exon 1699424 1699725 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1699424 2021908 1326 - . alignment_id 0 ; Query GL50803_102662-t26_1-p1 ; Align 2021909 32 138 ; Align 2021768 78 111 ; Align 2021656 115 99 ; Align 2021554 148 105 ; Align 2021446 183 57 ; Align 1957389 203 126 ; Align 1838529 246 150 ; Align 1838379 297 39 ; Align 1838340 312 147 ; Align 1838193 362 102 ; Align 1838091 397 90 ; Align 1699724 428 168 ; Align 1699556 485 12 ; Align 1699544 491 120 utg265_pilon exonerate:protein2genome:local gene 631555 631872 380 + . gene_id 0 ; sequence GL50803_102678-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 631555 631872 . + . utg265_pilon exonerate:protein2genome:local exon 631555 631872 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 631555 631872 380 + . alignment_id 0 ; Query GL50803_102678-t26_1-p1 ; Align 631555 12 318 utg731_pilon exonerate:protein2genome:local gene 780349 781350 1132 - . gene_id 0 ; sequence GL50803_102688-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 780349 781350 . - . utg731_pilon exonerate:protein2genome:local exon 780349 781350 . - . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 780349 781350 1132 - . alignment_id 0 ; Query GL50803_102688-t26_1-p1 ; Align 781351 1 177 ; Align 781174 61 711 ; Align 780463 300 114 utg64_pilon exonerate:protein2genome:local gene 162832 163437 909 + . gene_id 0 ; sequence GL50803_10269-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 162832 163437 . + . utg64_pilon exonerate:protein2genome:local exon 162832 163437 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 162832 163437 909 + . alignment_id 0 ; Query GL50803_10269-t26_1-p1 ; Align 162832 1 606 utg64_pilon exonerate:protein2genome:local gene 161241 162446 1553 + . gene_id 0 ; sequence GL50803_10270-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 161241 162446 . + . utg64_pilon exonerate:protein2genome:local exon 161241 162446 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 161241 162446 1553 + . alignment_id 0 ; Query GL50803_10270-t26_1-p1 ; Align 161241 14 1185 ; Align 162429 409 18 utg731_pilon exonerate:protein2genome:local gene 735976 736329 372 + . gene_id 0 ; sequence GL50803_102703-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 735976 736329 . + . utg731_pilon exonerate:protein2genome:local exon 735976 736329 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 735976 736329 372 + . alignment_id 0 ; Query GL50803_102703-t26_1-p1 ; Align 735976 1 354 utg731_pilon exonerate:protein2genome:local gene 713806 716232 3381 - . gene_id 0 ; sequence GL50803_102710-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 713806 716232 . - . utg731_pilon exonerate:protein2genome:local exon 713806 716232 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 713806 716232 3381 - . alignment_id 0 ; Query GL50803_102710-t26_1-p1 ; Align 716233 1 2427 utg731_pilon exonerate:protein2genome:local gene 676606 678921 3327 - . gene_id 0 ; sequence GL50803_102722-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 676606 678921 . - . utg731_pilon exonerate:protein2genome:local exon 676606 678921 . - . insertions 3 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 676606 678921 3327 - . alignment_id 0 ; Query GL50803_102722-t26_1-p1 ; Align 678922 1 1290 ; Align 677629 431 285 ; Align 677344 527 738 utg731_pilon exonerate:protein2genome:local gene 660516 660734 256 - . gene_id 0 ; sequence GL50803_102727-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 660516 660734 . - . utg731_pilon exonerate:protein2genome:local exon 660516 660734 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 660516 660734 256 - . alignment_id 0 ; Query GL50803_102727-t26_1-p1 ; Align 660735 1 219 utg731_pilon exonerate:protein2genome:local gene 659741 661569 2438 + . gene_id 0 ; sequence GL50803_102728-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 659741 661569 . + . utg731_pilon exonerate:protein2genome:local exon 659741 661569 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 659741 661569 2438 + . alignment_id 0 ; Query GL50803_102728-t26_1-p1 ; Align 659741 1 231 ; Align 659974 78 3 ; Align 659977 80 1593 utg731_pilon exonerate:protein2genome:local gene 648390 648602 257 - . gene_id 0 ; sequence GL50803_102731-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 648390 648602 . - . utg731_pilon exonerate:protein2genome:local exon 648390 648602 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 648390 648602 257 - . alignment_id 0 ; Query GL50803_102731-t26_1-p1 ; Align 648603 1 213 utg731_pilon exonerate:protein2genome:local gene 507902 508192 214 + . gene_id 0 ; sequence GL50803_102740-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 507902 508192 . + . utg731_pilon exonerate:protein2genome:local exon 507902 508192 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 507902 508192 214 + . alignment_id 0 ; Query GL50803_102740-t26_1-p1 ; Align 507902 1 291 utg64_pilon exonerate:protein2genome:local gene 18117 355928 380 - . gene_id 0 ; sequence GL50803_102761-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 355708 355928 . - . utg64_pilon exonerate:protein2genome:local exon 355708 355928 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 355706 355707 . - . intron_id 1 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 200034 355707 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 200034 200035 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 199903 200033 . - . utg64_pilon exonerate:protein2genome:local exon 199903 200033 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 199901 199902 . - . intron_id 2 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 18170 199902 . - . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 18170 18171 . - . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 18117 18169 . - . utg64_pilon exonerate:protein2genome:local exon 18117 18169 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 18117 355928 380 - . alignment_id 0 ; Query GL50803_102761-t26_1-p1 ; Align 355929 1 219 ; Align 200033 75 33 ; Align 199997 86 93 ; Align 18168 118 51 utg64_pilon exonerate:protein2genome:local gene 205131 206081 956 - . gene_id 0 ; sequence GL50803_102813-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 205131 206081 . - . utg64_pilon exonerate:protein2genome:local exon 205131 206081 . - . insertions 15 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 205131 206081 956 - . alignment_id 0 ; Query GL50803_102813-t26_1-p1 ; Align 206082 30 294 ; Align 205788 129 132 ; Align 205644 173 399 ; Align 205242 306 111 utg731_pilon exonerate:protein2genome:local gene 338550 339038 404 + . gene_id 0 ; sequence GL50803_102841-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 338550 339038 . + . utg731_pilon exonerate:protein2genome:local exon 338550 339038 . + . insertions 12 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 338550 339038 404 + . alignment_id 0 ; Query GL50803_102841-t26_1-p1 ; Align 338550 1 414 ; Align 338976 139 63 utg731_pilon exonerate:protein2genome:local gene 332654 333142 404 - . gene_id 0 ; sequence GL50803_102841-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 332654 333142 . - . utg731_pilon exonerate:protein2genome:local exon 332654 333142 . - . insertions 12 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 332654 333142 404 - . alignment_id 0 ; Query GL50803_102841-t26_1-p1 ; Align 333143 1 414 ; Align 332717 139 63 utg64_pilon exonerate:protein2genome:local gene 79906 205769 323 - . gene_id 0 ; sequence GL50803_102842-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 205564 205769 . - . utg64_pilon exonerate:protein2genome:local exon 205564 205769 . - . insertions 12 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 205562 205563 . - . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 80060 205563 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 80060 80061 . - . intron_id 0 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local cds 79906 80059 . - . utg64_pilon exonerate:protein2genome:local exon 79906 80059 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 79906 205769 323 - . alignment_id 0 ; Query GL50803_102842-t26_1-p1 ; Align 205770 12 114 ; Align 205644 50 78 ; Align 80059 77 153 utg349_pilon exonerate:protein2genome:local gene 852335 852595 171 - . gene_id 0 ; sequence GL50803_102845-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 852335 852595 . - . utg349_pilon exonerate:protein2genome:local exon 852335 852595 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 852335 852595 171 - . alignment_id 0 ; Query GL50803_102845-t26_1-p1 ; Align 852596 2 261 utg349_pilon exonerate:protein2genome:local gene 868916 872223 4006 + . gene_id 0 ; sequence GL50803_102858-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 868916 872223 . + . utg349_pilon exonerate:protein2genome:local exon 868916 872223 . + . insertions 0 ; deletions 6 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 868916 872223 4006 + . alignment_id 0 ; Query GL50803_102858-t26_1-p1 ; Align 868916 1 306 ; Align 869222 108 2640 ; Align 871864 988 3 ; Align 871867 990 357 utg47_pilon exonerate:protein2genome:local gene 605233 607074 1998 - . gene_id 0 ; sequence GL50803_102874-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 605233 607074 . - . utg47_pilon exonerate:protein2genome:local exon 605233 607074 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 605233 607074 1998 - . alignment_id 0 ; Query GL50803_102874-t26_1-p1 ; Align 607075 1 1107 ; Align 605968 371 735 utg731_pilon exonerate:protein2genome:local gene 1166200 1167288 1845 + . gene_id 0 ; sequence GL50803_102890-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1166200 1167288 . + . utg731_pilon exonerate:protein2genome:local exon 1166200 1167288 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1166200 1167288 1845 + . alignment_id 0 ; Query GL50803_102890-t26_1-p1 ; Align 1166200 1 1089 utg731_pilon exonerate:protein2genome:local gene 1148634 1152380 4907 + . gene_id 0 ; sequence GL50803_102893-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1148634 1152380 . + . utg731_pilon exonerate:protein2genome:local exon 1148634 1152380 . + . insertions 3 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 1148634 1152380 4907 + . alignment_id 0 ; Query GL50803_102893-t26_1-p1 ; Align 1148634 1 273 ; Align 1148907 95 951 ; Align 1149858 413 828 ; Align 1150689 689 1692 utg11_pilon exonerate:protein2genome:local gene 1191944 1195360 5139 - . gene_id 0 ; sequence GL50803_10291-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1191944 1195360 . - . utg11_pilon exonerate:protein2genome:local exon 1191944 1195360 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1191944 1195360 5139 - . alignment_id 0 ; Query GL50803_10291-t26_1-p1 ; Align 1195361 1 3417 utg731_pilon exonerate:protein2genome:local gene 1059020 1060870 2319 + . gene_id 0 ; sequence GL50803_102921-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1059020 1060870 . + . utg731_pilon exonerate:protein2genome:local exon 1059020 1060870 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1059020 1060870 2319 + . alignment_id 0 ; Query GL50803_102921-t26_1-p1 ; Align 1059020 1 1851 utg349_pilon exonerate:protein2genome:local gene 1602361 1602546 259 + . gene_id 0 ; sequence GL50803_102955-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1602361 1602546 . + . utg349_pilon exonerate:protein2genome:local exon 1602361 1602546 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1602361 1602546 259 + . alignment_id 0 ; Query GL50803_102955-t26_1-p1 ; Align 1602361 1 186 utg349_pilon exonerate:protein2genome:local gene 1600066 1600311 201 - . gene_id 0 ; sequence GL50803_102957-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1600066 1600311 . - . utg349_pilon exonerate:protein2genome:local exon 1600066 1600311 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1600066 1600311 201 - . alignment_id 0 ; Query GL50803_102957-t26_1-p1 ; Align 1600312 1 246 utg349_pilon exonerate:protein2genome:local gene 1592792 1594780 2834 - . gene_id 0 ; sequence GL50803_102961-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1592792 1594780 . - . utg349_pilon exonerate:protein2genome:local exon 1592792 1594780 . - . insertions 6 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 1592792 1594780 2834 - . alignment_id 0 ; Query GL50803_102961-t26_1-p1 ; Align 1594781 1 261 ; Align 1594514 88 1095 ; Align 1593419 456 45 ; Align 1593374 472 582 utg349_pilon exonerate:protein2genome:local gene 1587006 1588580 2417 + . gene_id 0 ; sequence GL50803_102963-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1587006 1588580 . + . utg349_pilon exonerate:protein2genome:local exon 1587006 1588580 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1587006 1588580 2417 + . alignment_id 0 ; Query GL50803_102963-t26_1-p1 ; Align 1587006 1 1575 utg11_pilon exonerate:protein2genome:local gene 1186993 1188336 2103 + . gene_id 0 ; sequence GL50803_10297-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1186993 1188336 . + . utg11_pilon exonerate:protein2genome:local exon 1186993 1188336 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1186993 1188336 2103 + . alignment_id 0 ; Query GL50803_10297-t26_1-p1 ; Align 1186993 1 1305 ; Align 1188298 437 39 utg1966_pilon exonerate:protein2genome:local gene 22916 23485 714 - . gene_id 0 ; sequence GL50803_102978-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 22916 23485 . - . utg1966_pilon exonerate:protein2genome:local exon 22916 23485 . - . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 22916 23485 714 - . alignment_id 0 ; Query GL50803_102978-t26_1-p1 ; Align 23486 1 570 utg11_pilon exonerate:protein2genome:local gene 1185193 1185828 893 + . gene_id 0 ; sequence GL50803_10299-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1185193 1185828 . + . utg11_pilon exonerate:protein2genome:local exon 1185193 1185828 . + . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 1185193 1185828 893 + . alignment_id 0 ; Query GL50803_10299-t26_1-p1 ; Align 1185193 1 588 ; Align 1185781 201 48 utg349_pilon exonerate:protein2genome:local gene 1101092 1435690 1734 + . gene_id 0 ; sequence GL50803_103001-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1101092 1101795 . + . utg349_pilon exonerate:protein2genome:local exon 1101092 1101795 . + . insertions 30 ; deletions 4 utg349_pilon exonerate:protein2genome:local splice5 1101796 1101797 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1101796 1101825 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1101824 1101825 . + . intron_id 0 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local cds 1101826 1102146 . + . utg349_pilon exonerate:protein2genome:local exon 1101826 1102146 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1102147 1102148 . + . intron_id 2 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 1102147 1239257 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1239256 1239257 . + . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 1239258 1239946 . + . utg349_pilon exonerate:protein2genome:local exon 1239258 1239946 . + . insertions 0 ; deletions 6 utg349_pilon exonerate:protein2genome:local splice5 1239947 1239948 . + . intron_id 3 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1239947 1435565 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 1435564 1435565 . + . intron_id 2 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 1435566 1435690 . + . utg349_pilon exonerate:protein2genome:local exon 1435566 1435690 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1101092 1435690 1734 + . alignment_id 0 ; Query GL50803_103001-t26_1-p1 ; Align 1101092 1 21 ; Align 1101119 8 69 ; Align 1101194 31 159 ; Align 1101356 84 66 ; Align 1101422 108 42 ; Align 1101470 122 87 ; Align 1101563 151 75 ; Align 1101641 176 90 ; Align 1101731 207 15 ; Align 1101746 213 48 ; Align 1101827 230 42 ; Align 1101869 245 276 ; Align 1239259 338 264 ; Align 1239523 428 84 ; Align 1239607 460 339 ; Align 1435568 574 6 ; Align 1435574 577 117 utg212_pilon exonerate:protein2genome:local gene 488476 488676 177 - . gene_id 0 ; sequence GL50803_103007-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 488476 488676 . - . utg212_pilon exonerate:protein2genome:local exon 488476 488676 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 488476 488676 177 - . alignment_id 0 ; Query GL50803_103007-t26_1-p1 ; Align 488677 1 201 utg349_pilon exonerate:protein2genome:local gene 223405 223803 396 + . gene_id 0 ; sequence GL50803_103019-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 223405 223803 . + . utg349_pilon exonerate:protein2genome:local exon 223405 223803 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 223405 223803 396 + . alignment_id 0 ; Query GL50803_103019-t26_1-p1 ; Align 223405 1 399 utg11_pilon exonerate:protein2genome:local gene 1181453 1182649 1826 + . gene_id 0 ; sequence GL50803_10303-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1181453 1182649 . + . utg11_pilon exonerate:protein2genome:local exon 1181453 1182649 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1181453 1182649 1826 + . alignment_id 0 ; Query GL50803_10303-t26_1-p1 ; Align 1181453 1 1197 utg349_pilon exonerate:protein2genome:local gene 23302 24556 1651 + . gene_id 0 ; sequence GL50803_103058-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 23302 24556 . + . utg349_pilon exonerate:protein2genome:local exon 23302 24556 . + . insertions 12 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 23302 24556 1651 + . alignment_id 0 ; Query GL50803_103058-t26_1-p1 ; Align 23302 2 81 ; Align 23384 29 309 ; Align 23696 132 9 ; Align 23711 135 327 ; Align 24041 244 516 utg349_pilon exonerate:protein2genome:local gene 25106 32326 11996 - . gene_id 0 ; sequence GL50803_103059-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 25106 32326 . - . utg349_pilon exonerate:protein2genome:local exon 25106 32326 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 25106 32326 11996 - . alignment_id 0 ; Query GL50803_103059-t26_1-p1 ; Align 32327 1 1575 ; Align 30749 526 5643 utg731_pilon exonerate:protein2genome:local gene 1131596 1227167 5147 - . gene_id 0 ; sequence GL50803_103074-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1223307 1227167 . - . utg731_pilon exonerate:protein2genome:local exon 1223307 1227167 . - . insertions 12 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1223305 1223306 . - . intron_id 1 ; splice_site "GA" utg731_pilon exonerate:protein2genome:local intron 1131629 1223306 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1131629 1131630 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1131596 1131628 . - . utg731_pilon exonerate:protein2genome:local exon 1131596 1131628 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1131596 1227167 5147 - . alignment_id 0 ; Query GL50803_103074-t26_1-p1 ; Align 1227168 1 1752 ; Align 1225413 585 1359 ; Align 1224048 1038 33 ; Align 1224012 1049 705 ; Align 1131629 1284 33 utg99_pilon exonerate:protein2genome:local gene 275947 278496 3461 - . gene_id 0 ; sequence GL50803_103082-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 275947 278496 . - . utg99_pilon exonerate:protein2genome:local exon 275947 278496 . - . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 275947 278496 3461 - . alignment_id 0 ; Query GL50803_103082-t26_1-p1 ; Align 278497 143 1344 ; Align 277153 592 1206 utg11_pilon exonerate:protein2genome:local gene 707703 708101 326 - . gene_id 0 ; sequence GL50803_103094-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 707703 708101 . - . utg11_pilon exonerate:protein2genome:local exon 707703 708101 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 707703 708101 326 - . alignment_id 0 ; Query GL50803_103094-t26_1-p1 ; Align 708102 122 399 utg47_pilon exonerate:protein2genome:local gene 285056 285322 229 + . gene_id 0 ; sequence GL50803_103107-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 285056 285322 . + . utg47_pilon exonerate:protein2genome:local exon 285056 285322 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 285056 285322 229 + . alignment_id 0 ; Query GL50803_103107-t26_1-p1 ; Align 285056 1 267 utg731_pilon exonerate:protein2genome:local gene 977928 978908 1697 - . gene_id 0 ; sequence GL50803_10311-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 977928 978908 . - . utg731_pilon exonerate:protein2genome:local exon 977928 978908 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 977928 978908 1697 - . alignment_id 0 ; Query GL50803_10311-t26_1-p1 ; Align 978909 1 981 utg11_pilon exonerate:protein2genome:local gene 128912 132772 4088 + . gene_id 0 ; sequence GL50803_103125-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 128912 132772 . + . utg11_pilon exonerate:protein2genome:local exon 128912 132772 . + . insertions 6 ; deletions 8 utg11_pilon exonerate:protein2genome:local similarity 128912 132772 4088 + . alignment_id 0 ; Query GL50803_103125-t26_1-p1 ; Align 128912 1 885 ; Align 129797 297 39 ; Align 129836 311 396 ; Align 130238 443 540 ; Align 130778 624 552 ; Align 131330 811 66 ; Align 131396 834 1116 ; Align 132512 1207 261 utg731_pilon exonerate:protein2genome:local gene 979102 980013 1481 + . gene_id 0 ; sequence GL50803_10313-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 979102 980013 . + . utg731_pilon exonerate:protein2genome:local exon 979102 980013 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 979102 980013 1481 + . alignment_id 0 ; Query GL50803_10313-t26_1-p1 ; Align 979102 1 912 utg11_pilon exonerate:protein2genome:local gene 862986 1019009 549 + . gene_id 0 ; sequence GL50803_103142-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 862986 863334 . + . utg11_pilon exonerate:protein2genome:local exon 862986 863334 . + . insertions 0 ; deletions 5 utg11_pilon exonerate:protein2genome:local splice5 863335 863336 . + . intron_id 1 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 863335 1018872 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1018871 1018872 . + . intron_id 0 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 1018873 1019009 . + . utg11_pilon exonerate:protein2genome:local exon 1018873 1019009 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 862986 1019009 549 + . alignment_id 0 ; Query GL50803_103142-t26_1-p1 ; Align 862986 1 111 ; Align 863097 40 141 ; Align 863238 90 96 ; Align 1018875 123 135 utg731_pilon exonerate:protein2genome:local gene 981114 981779 1018 - . gene_id 0 ; sequence GL50803_10315-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 981114 981779 . - . utg731_pilon exonerate:protein2genome:local exon 981114 981779 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 981114 981779 1018 - . alignment_id 0 ; Query GL50803_10315-t26_1-p1 ; Align 981780 1 666 utg731_pilon exonerate:protein2genome:local gene 981823 982836 1200 - . gene_id 0 ; sequence GL50803_10316-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 982042 982836 . - . utg731_pilon exonerate:protein2genome:local exon 982042 982836 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local splice5 982040 982041 . - . intron_id 1 ; splice_site "AA" utg731_pilon exonerate:protein2genome:local intron 982012 982041 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 982012 982013 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 981823 982011 . - . utg731_pilon exonerate:protein2genome:local exon 981823 982011 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 981823 982836 1200 - . alignment_id 0 ; Query GL50803_10316-t26_1-p1 ; Align 982837 1 738 ; Align 982099 248 57 ; Align 982012 267 27 ; Align 981985 277 162 utg47_pilon exonerate:protein2genome:local gene 903412 904619 1949 + . gene_id 0 ; sequence GL50803_103164-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 903412 904619 . + . utg47_pilon exonerate:protein2genome:local exon 903412 904619 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 903412 904619 1949 + . alignment_id 0 ; Query GL50803_103164-t26_1-p1 ; Align 903412 1 525 ; Align 903939 177 681 utg64_pilon exonerate:protein2genome:local gene 932661 935618 3877 - . gene_id 0 ; sequence GL50803_103175-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 932661 935618 . - . utg64_pilon exonerate:protein2genome:local exon 932661 935618 . - . insertions 18 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 932661 935618 3877 - . alignment_id 0 ; Query GL50803_103175-t26_1-p1 ; Align 935619 1 702 ; Align 934911 235 1686 ; Align 933213 797 177 ; Align 933036 857 375 utg64_pilon exonerate:protein2genome:local gene 868938 871940 3850 - . gene_id 0 ; sequence GL50803_103202-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 868938 871940 . - . utg64_pilon exonerate:protein2genome:local exon 868938 871940 . - . insertions 3 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 868938 871940 3850 - . alignment_id 0 ; Query GL50803_103202-t26_1-p1 ; Align 871941 361 87 ; Align 871851 390 2160 ; Align 869691 1111 753 utg64_pilon exonerate:protein2genome:local gene 938645 942019 3791 - . gene_id 0 ; sequence GL50803_103205-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 938645 942019 . - . utg64_pilon exonerate:protein2genome:local exon 938645 942019 . - . insertions 15 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 938645 942019 3791 - . alignment_id 0 ; Query GL50803_103205-t26_1-p1 ; Align 942020 3 876 ; Align 941144 297 327 ; Align 940817 407 87 ; Align 940718 436 117 ; Align 940601 476 1308 ; Align 939290 912 645 utg18_pilon exonerate:protein2genome:local gene 406872 407087 238 + . gene_id 0 ; sequence GL50803_103206-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 406872 407087 . + . utg18_pilon exonerate:protein2genome:local exon 406872 407087 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 406872 407087 238 + . alignment_id 0 ; Query GL50803_103206-t26_1-p1 ; Align 406872 3 216 utg64_pilon exonerate:protein2genome:local gene 551063 551513 315 - . gene_id 0 ; sequence GL50803_103237-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 551063 551513 . - . utg64_pilon exonerate:protein2genome:local exon 551063 551513 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 551063 551513 315 - . alignment_id 0 ; Query GL50803_103237-t26_1-p1 ; Align 551514 2 279 ; Align 551234 95 171 utg731_pilon exonerate:protein2genome:local gene 989997 990713 1070 + . gene_id 0 ; sequence GL50803_10324-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 989997 990713 . + . utg731_pilon exonerate:protein2genome:local exon 989997 990713 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 989997 990713 1070 + . alignment_id 0 ; Query GL50803_10324-t26_1-p1 ; Align 989997 1 717 utg265_pilon exonerate:protein2genome:local gene 967668 967904 286 - . gene_id 0 ; sequence GL50803_103249-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 967668 967904 . - . utg265_pilon exonerate:protein2genome:local exon 967668 967904 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 967668 967904 286 - . alignment_id 0 ; Query GL50803_103249-t26_1-p1 ; Align 967905 1 237 utg64_pilon exonerate:protein2genome:local gene 383743 383976 205 + . gene_id 0 ; sequence GL50803_103284-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 383743 383976 . + . utg64_pilon exonerate:protein2genome:local exon 383743 383976 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 383743 383976 205 + . alignment_id 0 ; Query GL50803_103284-t26_1-p1 ; Align 383743 1 234 utg64_pilon exonerate:protein2genome:local gene 383680 390825 9691 - . gene_id 0 ; sequence GL50803_103285-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 383680 390825 . - . utg64_pilon exonerate:protein2genome:local exon 383680 390825 . - . insertions 6 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 383680 390825 9691 - . alignment_id 0 ; Query GL50803_103285-t26_1-p1 ; Align 390826 1 1359 ; Align 389464 454 2463 ; Align 387001 1276 501 ; Align 386497 1443 2817 utg731_pilon exonerate:protein2genome:local gene 992142 992333 324 - . gene_id 0 ; sequence GL50803_10329-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 992142 992333 . - . utg731_pilon exonerate:protein2genome:local exon 992142 992333 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 992142 992333 324 - . alignment_id 0 ; Query GL50803_10329-t26_1-p1 ; Align 992334 1 192 utg731_pilon exonerate:protein2genome:local gene 992490 993257 1134 + . gene_id 0 ; sequence GL50803_10330-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 992490 993257 . + . utg731_pilon exonerate:protein2genome:local exon 992490 993257 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 992490 993257 1134 + . alignment_id 0 ; Query GL50803_10330-t26_1-p1 ; Align 992490 1 249 ; Align 992739 85 519 utg64_pilon exonerate:protein2genome:local gene 451610 451840 244 - . gene_id 0 ; sequence GL50803_103304-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 451610 451840 . - . utg64_pilon exonerate:protein2genome:local exon 451610 451840 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 451610 451840 244 - . alignment_id 0 ; Query GL50803_103304-t26_1-p1 ; Align 451841 1 231 utg731_pilon exonerate:protein2genome:local gene 996161 996922 1124 - . gene_id 0 ; sequence GL50803_10335-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 996161 996922 . - . utg731_pilon exonerate:protein2genome:local exon 996161 996922 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 996161 996922 1124 - . alignment_id 0 ; Query GL50803_10335-t26_1-p1 ; Align 996923 1 624 ; Align 996299 210 138 utg11_pilon exonerate:protein2genome:local gene 1607737 1613926 8612 - . gene_id 0 ; sequence GL50803_103365-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1607737 1613926 . - . utg11_pilon exonerate:protein2genome:local exon 1607737 1613926 . - . insertions 3 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 1607737 1613926 8612 - . alignment_id 0 ; Query GL50803_103365-t26_1-p1 ; Align 1613927 2 57 ; Align 1613869 21 5598 ; Align 1608268 1887 531 utg364_pilon exonerate:protein2genome:local gene 63615 64502 1448 - . gene_id 0 ; sequence GL50803_103373-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 63615 64502 . - . utg364_pilon exonerate:protein2genome:local exon 63615 64502 . - . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 63615 64502 1448 - . alignment_id 0 ; Query GL50803_103373-t26_1-p1 ; Align 64503 93 888 utg731_pilon exonerate:protein2genome:local gene 1000804 1002075 1706 - . gene_id 0 ; sequence GL50803_10339-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1000804 1002075 . - . utg731_pilon exonerate:protein2genome:local exon 1000804 1002075 . - . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1000804 1002075 1706 - . alignment_id 0 ; Query GL50803_10339-t26_1-p1 ; Align 1002076 1 621 ; Align 1001452 208 195 ; Align 1001251 273 447 utg731_pilon exonerate:protein2genome:local gene 1004295 1005308 1550 - . gene_id 0 ; sequence GL50803_10341-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1004295 1005308 . - . utg731_pilon exonerate:protein2genome:local exon 1004295 1005308 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1004295 1005308 1550 - . alignment_id 0 ; Query GL50803_10341-t26_1-p1 ; Align 1005309 1 1014 utg731_pilon exonerate:protein2genome:local gene 225500 225712 203 + . gene_id 0 ; sequence GL50803_103430-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 225500 225712 . + . utg731_pilon exonerate:protein2genome:local exon 225500 225712 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 225500 225712 203 + . alignment_id 0 ; Query GL50803_103430-t26_1-p1 ; Align 225500 1 213 utg731_pilon exonerate:protein2genome:local gene 228245 228553 236 + . gene_id 0 ; sequence GL50803_103431-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 228245 228553 . + . utg731_pilon exonerate:protein2genome:local exon 228245 228553 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 228245 228553 236 + . alignment_id 0 ; Query GL50803_103431-t26_1-p1 ; Align 228245 1 309 utg18_pilon exonerate:protein2genome:local gene 404140 405042 1493 - . gene_id 0 ; sequence GL50803_103437-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 404140 405042 . - . utg18_pilon exonerate:protein2genome:local exon 404140 405042 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 404140 405042 1493 - . alignment_id 0 ; Query GL50803_103437-t26_1-p1 ; Align 405043 1 903 utg47_pilon exonerate:protein2genome:local gene 2012263 2014467 2927 + . gene_id 0 ; sequence GL50803_103454-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2012263 2014467 . + . utg47_pilon exonerate:protein2genome:local exon 2012263 2014467 . + . insertions 18 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2012263 2014467 2927 + . alignment_id 0 ; Query GL50803_103454-t26_1-p1 ; Align 2012263 7 237 ; Align 2012509 86 1803 ; Align 2014318 687 108 ; Align 2014429 723 39 utg11_pilon exonerate:protein2genome:local gene 1734111 1734320 218 + . gene_id 0 ; sequence GL50803_103456-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1734111 1734320 . + . utg11_pilon exonerate:protein2genome:local exon 1734111 1734320 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1734111 1734320 218 + . alignment_id 0 ; Query GL50803_103456-t26_1-p1 ; Align 1734111 1 210 utg11_pilon exonerate:protein2genome:local gene 1643989 1644588 651 - . gene_id 0 ; sequence GL50803_103480-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1643989 1644588 . - . utg11_pilon exonerate:protein2genome:local exon 1643989 1644588 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1643989 1644588 651 - . alignment_id 0 ; Query GL50803_103480-t26_1-p1 ; Align 1644589 1 600 utg99_pilon exonerate:protein2genome:local gene 21726 22157 555 + . gene_id 0 ; sequence GL50803_103493-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 21726 22157 . + . utg99_pilon exonerate:protein2genome:local exon 21726 22157 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 21726 22157 555 + . alignment_id 0 ; Query GL50803_103493-t26_1-p1 ; Align 21726 1 432 utg64_pilon exonerate:protein2genome:local gene 979932 980171 238 - . gene_id 0 ; sequence GL50803_103536-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 979932 980171 . - . utg64_pilon exonerate:protein2genome:local exon 979932 980171 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 979932 980171 238 - . alignment_id 0 ; Query GL50803_103536-t26_1-p1 ; Align 980172 2 240 utg349_pilon exonerate:protein2genome:local gene 1097154 1098068 1203 - . gene_id 0 ; sequence GL50803_103540-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1097154 1098068 . - . utg349_pilon exonerate:protein2genome:local exon 1097154 1098068 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1097154 1098068 1203 - . alignment_id 0 ; Query GL50803_103540-t26_1-p1 ; Align 1098069 1 780 ; Align 1097286 261 132 utg308_pilon exonerate:protein2genome:local gene 6082 7323 2191 - . gene_id 0 ; sequence GL50803_10358-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 6082 7323 . - . utg308_pilon exonerate:protein2genome:local exon 6082 7323 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 6082 7323 2191 - . alignment_id 0 ; Query GL50803_10358-t26_1-p1 ; Align 7324 1 1242 utg11_pilon exonerate:protein2genome:local gene 1105305 1108832 4045 - . gene_id 0 ; sequence GL50803_103606-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1105305 1108832 . - . utg11_pilon exonerate:protein2genome:local exon 1105305 1108832 . - . insertions 30 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1105305 1108832 4045 - . alignment_id 0 ; Query GL50803_103606-t26_1-p1 ; Align 1108833 1 267 ; Align 1108557 90 144 ; Align 1108404 138 30 ; Align 1108368 148 552 ; Align 1107810 332 618 ; Align 1107192 539 735 ; Align 1106457 785 1152 utg308_pilon exonerate:protein2genome:local gene 7878 9818 2973 + . gene_id 0 ; sequence GL50803_10361-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 7878 9818 . + . utg308_pilon exonerate:protein2genome:local exon 7878 9818 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 7878 9818 2973 + . alignment_id 0 ; Query GL50803_10361-t26_1-p1 ; Align 7878 1 474 ; Align 8352 160 1467 utg308_pilon exonerate:protein2genome:local gene 308470 309636 1837 - . gene_id 0 ; sequence GL50803_103659-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 308470 309636 . - . utg308_pilon exonerate:protein2genome:local exon 308470 309636 . - . insertions 0 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 308470 309636 1837 - . alignment_id 0 ; Query GL50803_103659-t26_1-p1 ; Align 309637 1 87 ; Align 309550 33 1080 utg11_pilon exonerate:protein2genome:local gene 688472 688867 662 - . gene_id 0 ; sequence GL50803_10367-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 688472 688867 . - . utg11_pilon exonerate:protein2genome:local exon 688472 688867 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 688472 688867 662 - . alignment_id 0 ; Query GL50803_10367-t26_1-p1 ; Align 688868 1 396 utg265_pilon exonerate:protein2genome:local gene 472049 473410 2415 + . gene_id 0 ; sequence GL50803_103676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 472049 473410 . + . utg265_pilon exonerate:protein2genome:local exon 472049 473410 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 472049 473410 2415 + . alignment_id 0 ; Query GL50803_103676-t26_1-p1 ; Align 472049 1 1362 utg731_pilon exonerate:protein2genome:local gene 173795 175156 2415 + . gene_id 0 ; sequence GL50803_103676-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 173795 175156 . + . utg731_pilon exonerate:protein2genome:local exon 173795 175156 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 173795 175156 2415 + . alignment_id 0 ; Query GL50803_103676-t26_1-p1 ; Align 173795 1 1362 utg11_pilon exonerate:protein2genome:local gene 692149 693495 2002 - . gene_id 0 ; sequence GL50803_10370-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 692149 693495 . - . utg11_pilon exonerate:protein2genome:local exon 692149 693495 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 692149 693495 2002 - . alignment_id 0 ; Query GL50803_10370-t26_1-p1 ; Align 693496 1 1347 utg731_pilon exonerate:protein2genome:local gene 378816 381359 3531 + . gene_id 0 ; sequence GL50803_103709-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 378816 381359 . + . utg731_pilon exonerate:protein2genome:local exon 378816 381359 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 378816 381359 3531 + . alignment_id 0 ; Query GL50803_103709-t26_1-p1 ; Align 378816 1 2544 utg731_pilon exonerate:protein2genome:local gene 386050 386364 247 + . gene_id 0 ; sequence GL50803_103711-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 386050 386364 . + . utg731_pilon exonerate:protein2genome:local exon 386050 386364 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 386050 386364 247 + . alignment_id 0 ; Query GL50803_103711-t26_1-p1 ; Align 386050 1 315 utg731_pilon exonerate:protein2genome:local gene 537132 538556 1633 + . gene_id 0 ; sequence GL50803_103713-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 537132 538011 . + . utg731_pilon exonerate:protein2genome:local exon 537132 538011 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 538012 538013 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 538012 538389 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 538388 538389 . + . intron_id 0 ; splice_site "GG" utg731_pilon exonerate:protein2genome:local cds 538390 538556 . + . utg731_pilon exonerate:protein2genome:local exon 538390 538556 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 537132 538556 1633 + . alignment_id 0 ; Query GL50803_103713-t26_1-p1 ; Align 537132 1 879 ; Align 538392 295 165 utg731_pilon exonerate:protein2genome:local gene 561846 562052 156 + . gene_id 0 ; sequence GL50803_103715-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 561846 562052 . + . utg731_pilon exonerate:protein2genome:local exon 561846 562052 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 561846 562052 156 + . alignment_id 0 ; Query GL50803_103715-t26_1-p1 ; Align 561846 6 207 utg731_pilon exonerate:protein2genome:local gene 604231 604439 109 + . gene_id 0 ; sequence GL50803_103726-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 604231 604439 . + . utg731_pilon exonerate:protein2genome:local exon 604231 604439 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 604231 604439 109 + . alignment_id 0 ; Query GL50803_103726-t26_1-p1 ; Align 604231 1 60 ; Align 604293 22 147 utg11_pilon exonerate:protein2genome:local gene 696586 698678 2685 - . gene_id 0 ; sequence GL50803_10374-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 696586 698678 . - . utg11_pilon exonerate:protein2genome:local exon 696586 698678 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 696586 698678 2685 - . alignment_id 0 ; Query GL50803_10374-t26_1-p1 ; Align 698679 1 909 ; Align 697768 305 1182 utg212_pilon exonerate:protein2genome:local gene 345301 345507 245 - . gene_id 0 ; sequence GL50803_103757-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 345301 345507 . - . utg212_pilon exonerate:protein2genome:local exon 345301 345507 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 345301 345507 245 - . alignment_id 0 ; Query GL50803_103757-t26_1-p1 ; Align 345508 1 207 utg212_pilon exonerate:protein2genome:local gene 305594 305776 181 - . gene_id 0 ; sequence GL50803_103771-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 305594 305776 . - . utg212_pilon exonerate:protein2genome:local exon 305594 305776 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 305594 305776 181 - . alignment_id 0 ; Query GL50803_103771-t26_1-p1 ; Align 305777 1 183 utg18_pilon exonerate:protein2genome:local gene 127376 128080 1125 + . gene_id 0 ; sequence GL50803_103783-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 127376 128080 . + . utg18_pilon exonerate:protein2genome:local exon 127376 128080 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 127376 128080 1125 + . alignment_id 0 ; Query GL50803_103783-t26_1-p1 ; Align 127376 1 705 utg18_pilon exonerate:protein2genome:local gene 94599 187281 1040 - . gene_id 0 ; sequence GL50803_103785-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 187109 187281 . - . utg18_pilon exonerate:protein2genome:local exon 187109 187281 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 187107 187108 . - . intron_id 1 ; splice_site "GG" utg18_pilon exonerate:protein2genome:local intron 95173 187108 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 95173 95174 . - . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 94599 95172 . - . utg18_pilon exonerate:protein2genome:local exon 94599 95172 . - . insertions 3 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 94599 187281 1040 - . alignment_id 0 ; Query GL50803_103785-t26_1-p1 ; Align 187282 1 171 ; Align 95172 59 459 ; Align 94710 212 111 utg99_pilon exonerate:protein2genome:local gene 43380 44120 1040 + . gene_id 0 ; sequence GL50803_103785-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 43380 44120 . + . utg99_pilon exonerate:protein2genome:local exon 43380 44120 . + . insertions 3 ; deletions 2 utg99_pilon exonerate:protein2genome:local similarity 43380 44120 1040 + . alignment_id 0 ; Query GL50803_103785-t26_1-p1 ; Align 43380 1 174 ; Align 43554 61 450 ; Align 44007 211 114 utg47_pilon exonerate:protein2genome:local gene 1199611 1201524 2368 + . gene_id 0 ; sequence GL50803_103807-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1199611 1201524 . + . utg47_pilon exonerate:protein2genome:local exon 1199611 1201524 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1199611 1201524 2368 + . alignment_id 0 ; Query GL50803_103807-t26_1-p1 ; Align 1199611 305 1092 ; Align 1200703 670 822 utg47_pilon exonerate:protein2genome:local gene 1185441 1189749 5403 - . gene_id 0 ; sequence GL50803_103810-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1185441 1189749 . - . utg47_pilon exonerate:protein2genome:local exon 1185441 1189749 . - . insertions 9 ; deletions 17 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 1185441 1189749 5403 - . alignment_id 0 ; Query GL50803_103810-t26_1-p1 ; Align 1189750 1 909 ; Align 1188841 306 210 ; Align 1188628 376 474 ; Align 1188154 535 678 ; Align 1187476 764 33 ; Align 1187441 775 24 ; Align 1187417 785 165 ; Align 1187252 843 225 ; Align 1187024 918 123 ; Align 1186898 959 1230 ; Align 1185666 1370 102 ; Align 1185564 1406 60 ; Align 1185504 1429 63 utg47_pilon exonerate:protein2genome:local gene 1156097 1163852 9587 - . gene_id 0 ; sequence GL50803_103818-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1156097 1163852 . - . utg47_pilon exonerate:protein2genome:local exon 1156097 1163852 . - . insertions 3 ; deletions 12 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 1156097 1163852 9587 - . alignment_id 0 ; Query GL50803_103818-t26_1-p1 ; Align 1163853 1 900 ; Align 1162953 304 276 ; Align 1162677 399 105 ; Align 1162569 434 933 ; Align 1161636 747 381 ; Align 1161255 875 1032 ; Align 1160221 1220 258 ; Align 1159963 1307 2784 ; Align 1157177 2236 1080 utg11_pilon exonerate:protein2genome:local gene 716576 717814 2164 - . gene_id 0 ; sequence GL50803_10382-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 716576 717814 . - . utg11_pilon exonerate:protein2genome:local exon 716576 717814 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 716576 717814 2164 - . alignment_id 0 ; Query GL50803_10382-t26_1-p1 ; Align 717815 23 1239 utg349_pilon exonerate:protein2genome:local gene 1134967 1135173 153 + . gene_id 0 ; sequence GL50803_103829-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1134967 1135173 . + . utg349_pilon exonerate:protein2genome:local exon 1134967 1135173 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1134967 1135173 153 + . alignment_id 0 ; Query GL50803_103829-t26_1-p1 ; Align 1134967 1 165 ; Align 1135135 56 39 utg349_pilon exonerate:protein2genome:local gene 1091501 1097122 8832 - . gene_id 0 ; sequence GL50803_103838-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1091501 1097122 . - . utg349_pilon exonerate:protein2genome:local exon 1091501 1097122 . - . insertions 3 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1091501 1097122 8832 - . alignment_id 0 ; Query GL50803_103838-t26_1-p1 ; Align 1097123 1 3828 ; Align 1093292 1277 1377 ; Align 1091915 1737 414 utg349_pilon exonerate:protein2genome:local gene 1089411 1089650 290 - . gene_id 0 ; sequence GL50803_103839-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1089411 1089650 . - . utg349_pilon exonerate:protein2genome:local exon 1089411 1089650 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1089411 1089650 290 - . alignment_id 0 ; Query GL50803_103839-t26_1-p1 ; Align 1089651 4 240 utg349_pilon exonerate:protein2genome:local gene 1079131 1079472 281 - . gene_id 0 ; sequence GL50803_103844-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1079131 1079472 . - . utg349_pilon exonerate:protein2genome:local exon 1079131 1079472 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 1079131 1079472 281 - . alignment_id 0 ; Query GL50803_103844-t26_1-p1 ; Align 1079473 1 69 ; Align 1079404 26 48 ; Align 1079356 43 225 utg349_pilon exonerate:protein2genome:local gene 1068689 1070251 2150 + . gene_id 0 ; sequence GL50803_103849-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1068689 1070251 . + . utg349_pilon exonerate:protein2genome:local exon 1068689 1070251 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1068689 1070251 2150 + . alignment_id 0 ; Query GL50803_103849-t26_1-p1 ; Align 1068689 8 1563 utg349_pilon exonerate:protein2genome:local gene 1189021 1190614 1893 + . gene_id 0 ; sequence GL50803_103855-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1189021 1190119 . + . utg349_pilon exonerate:protein2genome:local exon 1189021 1190119 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1190120 1190121 . + . intron_id 1 ; splice_site "CT" utg349_pilon exonerate:protein2genome:local intron 1190120 1190363 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1190362 1190363 . + . intron_id 0 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local cds 1190364 1190614 . + . utg349_pilon exonerate:protein2genome:local exon 1190364 1190614 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 1189021 1190614 1893 + . alignment_id 0 ; Query GL50803_103855-t26_1-p1 ; Align 1189021 1 1098 ; Align 1190366 368 126 ; Align 1190492 411 27 ; Align 1190519 421 96 utg47_pilon exonerate:protein2genome:local gene 2195505 2203787 10134 + . gene_id 0 ; sequence GL50803_103878-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2195505 2202493 . + . utg47_pilon exonerate:protein2genome:local exon 2195505 2202493 . + . insertions 3 ; deletions 5 utg47_pilon exonerate:protein2genome:local splice5 2202494 2202495 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 2202494 2202553 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 2202552 2202553 . + . intron_id 0 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local cds 2202554 2203787 . + . utg47_pilon exonerate:protein2genome:local exon 2202554 2203787 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2195505 2203787 10134 + . alignment_id 0 ; Query GL50803_103878-t26_1-p1 ; Align 2195505 1 225 ; Align 2195730 79 396 ; Align 2196126 212 117 ; Align 2196246 251 3960 ; Align 2200206 1572 2286 ; Align 2202555 2335 1233 utg47_pilon exonerate:protein2genome:local gene 2191002 2191220 241 - . gene_id 0 ; sequence GL50803_103880-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2191002 2191220 . - . utg47_pilon exonerate:protein2genome:local exon 2191002 2191220 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2191002 2191220 241 - . alignment_id 0 ; Query GL50803_103880-t26_1-p1 ; Align 2191221 3 219 utg47_pilon exonerate:protein2genome:local gene 2182216 2183460 1437 - . gene_id 0 ; sequence GL50803_103883-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2182216 2183460 . - . utg47_pilon exonerate:protein2genome:local exon 2182216 2183460 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2182216 2183460 1437 - . alignment_id 0 ; Query GL50803_103883-t26_1-p1 ; Align 2183461 1 495 ; Align 2182966 167 750 utg349_pilon exonerate:protein2genome:local gene 292122 294368 2694 - . gene_id 0 ; sequence GL50803_103887-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 292122 294368 . - . utg349_pilon exonerate:protein2genome:local exon 292122 294368 . - . insertions 0 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 292122 294368 2694 - . alignment_id 0 ; Query GL50803_103887-t26_1-p1 ; Align 294369 1 1560 ; Align 292809 524 84 ; Align 292725 553 603 utg349_pilon exonerate:protein2genome:local gene 294384 295367 1350 + . gene_id 0 ; sequence GL50803_103888-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 294384 295367 . + . utg349_pilon exonerate:protein2genome:local exon 294384 295367 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 294384 295367 1350 + . alignment_id 0 ; Query GL50803_103888-t26_1-p1 ; Align 294384 1 984 utg349_pilon exonerate:protein2genome:local gene 297674 299299 2228 - . gene_id 0 ; sequence GL50803_103891-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 297674 299299 . - . utg349_pilon exonerate:protein2genome:local exon 297674 299299 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 297674 299299 2228 - . alignment_id 0 ; Query GL50803_103891-t26_1-p1 ; Align 299300 1 1626 utg47_pilon exonerate:protein2genome:local gene 1498396 1505671 1015 + . gene_id 0 ; sequence GL50803_103895-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1498396 1499415 . + . utg47_pilon exonerate:protein2genome:local exon 1498396 1499415 . + . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 1499416 1499417 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1499416 1505533 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1505532 1505533 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1505534 1505671 . + . utg47_pilon exonerate:protein2genome:local exon 1505534 1505671 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1498396 1505671 1015 + . alignment_id 0 ; Query GL50803_103895-t26_1-p1 ; Align 1498396 1 612 ; Align 1499008 208 408 ; Align 1505534 344 138 utg212_pilon exonerate:protein2genome:local gene 14045 115880 654 + . gene_id 0 ; sequence GL50803_103916-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14045 14426 . + . utg212_pilon exonerate:protein2genome:local exon 14045 14426 . + . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local splice5 14427 14428 . + . intron_id 1 ; splice_site "AC" utg212_pilon exonerate:protein2genome:local intron 14427 115722 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115721 115722 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115723 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115723 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14045 115880 654 + . alignment_id 0 ; Query GL50803_103916-t26_1-p1 ; Align 14045 1 54 ; Align 14099 20 327 ; Align 115725 130 156 utg11_pilon exonerate:protein2genome:local gene 607717 608262 857 - . gene_id 0 ; sequence GL50803_103935-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 607717 608262 . - . utg11_pilon exonerate:protein2genome:local exon 607717 608262 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 607717 608262 857 - . alignment_id 0 ; Query GL50803_103935-t26_1-p1 ; Align 608263 1 546 utg11_pilon exonerate:protein2genome:local gene 641147 641707 857 + . gene_id 0 ; sequence GL50803_103943-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 641147 641707 . + . utg11_pilon exonerate:protein2genome:local exon 641147 641707 . + . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 641147 641707 857 + . alignment_id 0 ; Query GL50803_103943-t26_1-p1 ; Align 641147 1 495 ; Align 641648 166 60 utg265_pilon exonerate:protein2genome:local gene 99269 102157 2527 + . gene_id 0 ; sequence GL50803_103944-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 99269 100237 . + . utg265_pilon exonerate:protein2genome:local exon 99269 100237 . + . insertions 15 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 100238 100239 . + . intron_id 1 ; splice_site "AT" utg265_pilon exonerate:protein2genome:local intron 100238 100594 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 100593 100594 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 100595 102157 . + . utg265_pilon exonerate:protein2genome:local exon 100595 102157 . + . insertions 0 ; deletions 8 utg265_pilon exonerate:protein2genome:local similarity 99269 102157 2527 + . alignment_id 0 ; Query GL50803_103944-t26_1-p1 ; Align 99269 12 414 ; Align 99698 150 540 ; Align 100595 330 69 ; Align 100664 357 1425 ; Align 102089 833 12 ; Align 102101 840 57 utg265_pilon exonerate:protein2genome:local gene 668487 669826 1468 + . gene_id 0 ; sequence GL50803_103946-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 668487 669826 . + . utg265_pilon exonerate:protein2genome:local exon 668487 669826 . + . insertions 0 ; deletions 4 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 668487 669826 1468 + . alignment_id 0 ; Query GL50803_103946-t26_1-p1 ; Align 668487 1 1074 ; Align 669563 359 168 ; Align 669731 419 96 utg11_pilon exonerate:protein2genome:local gene 1807835 1808649 715 - . gene_id 0 ; sequence GL50803_103981-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1807969 1808649 . - . utg11_pilon exonerate:protein2genome:local exon 1807969 1808649 . - . insertions 18 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1807967 1807968 . - . intron_id 1 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 1807934 1807968 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1807934 1807935 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1807835 1807933 . - . utg11_pilon exonerate:protein2genome:local exon 1807835 1807933 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1807835 1808649 715 - . alignment_id 0 ; Query GL50803_103981-t26_1-p1 ; Align 1808650 1 453 ; Align 1808194 152 63 ; Align 1808125 173 57 ; Align 1808062 192 24 ; Align 1808035 200 66 ; Align 1807934 222 18 ; Align 1807916 230 81 utg731_pilon exonerate:protein2genome:local gene 1583534 1585090 2021 - . gene_id 0 ; sequence GL50803_103983-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1583534 1585090 . - . utg731_pilon exonerate:protein2genome:local exon 1583534 1585090 . - . insertions 12 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1583534 1585090 2021 - . alignment_id 0 ; Query GL50803_103983-t26_1-p1 ; Align 1585091 1 93 ; Align 1584992 32 387 ; Align 1584602 161 510 ; Align 1584092 332 135 ; Align 1583954 377 420 utg731_pilon exonerate:protein2genome:local gene 155251 155589 219 + . gene_id 0 ; sequence GL50803_103988-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 155251 155449 . + . utg731_pilon exonerate:protein2genome:local exon 155251 155449 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 155450 155451 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 155450 155482 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 155481 155482 . + . intron_id 0 ; splice_site "CG" utg731_pilon exonerate:protein2genome:local cds 155483 155589 . + . utg731_pilon exonerate:protein2genome:local exon 155483 155589 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 155251 155589 219 + . alignment_id 0 ; Query GL50803_103988-t26_1-p1 ; Align 155251 2 198 ; Align 155485 69 105 utg265_pilon exonerate:protein2genome:local gene 340459 922615 1565 - . gene_id 0 ; sequence GL50803_103992-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 922390 922615 . - . utg265_pilon exonerate:protein2genome:local exon 922390 922615 . - . insertions 12 ; deletions 1 utg265_pilon exonerate:protein2genome:local splice5 922388 922389 . - . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 771913 922389 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 771913 771914 . - . intron_id 0 ; splice_site "CG" utg265_pilon exonerate:protein2genome:local cds 771649 771912 . - . utg265_pilon exonerate:protein2genome:local exon 771649 771912 . - . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 771647 771648 . - . intron_id 2 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 594569 771648 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 594569 594570 . - . intron_id 1 ; splice_site "AT" utg265_pilon exonerate:protein2genome:local cds 594205 594568 . - . utg265_pilon exonerate:protein2genome:local exon 594205 594568 . - . insertions 9 ; deletions 2 utg265_pilon exonerate:protein2genome:local splice5 594203 594204 . - . intron_id 3 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 474848 594204 . - . intron_id 3 utg265_pilon exonerate:protein2genome:local splice3 474848 474849 . - . intron_id 2 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 473952 474847 . - . utg265_pilon exonerate:protein2genome:local exon 473952 474847 . - . insertions 0 ; deletions 6 utg265_pilon exonerate:protein2genome:local splice5 473950 473951 . - . intron_id 4 ; splice_site "AC" utg265_pilon exonerate:protein2genome:local intron 340587 473951 . - . intron_id 4 utg265_pilon exonerate:protein2genome:local splice3 340587 340588 . - . intron_id 3 ; splice_site "CG" utg265_pilon exonerate:protein2genome:local cds 340459 340586 . - . utg265_pilon exonerate:protein2genome:local exon 340459 340586 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 340459 922615 1565 - . alignment_id 0 ; Query GL50803_103992-t26_1-p1 ; Align 922616 2 51 ; Align 922553 19 69 ; Align 922484 43 93 ; Align 771911 75 165 ; Align 771740 130 90 ; Align 594567 161 84 ; Align 594480 189 102 ; Align 594372 223 48 ; Align 594324 241 117 ; Align 474847 281 30 ; Align 474817 292 165 ; Align 474652 348 135 ; Align 474517 394 267 ; Align 474250 485 231 ; Align 474019 563 66 ; Align 340585 586 126 utg47_pilon exonerate:protein2genome:local gene 1826298 1827600 1610 + . gene_id 0 ; sequence GL50803_10400-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1826298 1827600 . + . utg47_pilon exonerate:protein2genome:local exon 1826298 1827600 . + . insertions 0 ; deletions 0 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 1826298 1827600 1610 + . alignment_id 0 ; Query GL50803_10400-t26_1-p1 ; Align 1826298 1 120 ; Align 1826422 41 1179 utg47_pilon exonerate:protein2genome:local gene 729808 732057 3779 - . gene_id 0 ; sequence GL50803_104031-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 729808 732057 . - . utg47_pilon exonerate:protein2genome:local exon 729808 732057 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 729808 732057 3779 - . alignment_id 0 ; Query GL50803_104031-t26_1-p1 ; Align 732058 1 2250 utg364_pilon exonerate:protein2genome:local gene 32059 32451 292 + . gene_id 0 ; sequence GL50803_104062-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 32059 32451 . + . utg364_pilon exonerate:protein2genome:local exon 32059 32451 . + . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 32059 32451 292 + . alignment_id 0 ; Query GL50803_104062-t26_1-p1 ; Align 32059 4 393 utg731_pilon exonerate:protein2genome:local gene 338550 338912 295 + . gene_id 0 ; sequence GL50803_104063-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 338550 338912 . + . utg731_pilon exonerate:protein2genome:local exon 338550 338912 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 338550 338912 295 + . alignment_id 0 ; Query GL50803_104063-t26_1-p1 ; Align 338550 1 363 utg731_pilon exonerate:protein2genome:local gene 332780 333142 295 - . gene_id 0 ; sequence GL50803_104063-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 332780 333142 . - . utg731_pilon exonerate:protein2genome:local exon 332780 333142 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 332780 333142 295 - . alignment_id 0 ; Query GL50803_104063-t26_1-p1 ; Align 333143 1 363 utg308_pilon exonerate:protein2genome:local gene 578881 582207 4665 - . gene_id 0 ; sequence GL50803_104087-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 578881 582207 . - . utg308_pilon exonerate:protein2genome:local exon 578881 582207 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 578881 582207 4665 - . alignment_id 0 ; Query GL50803_104087-t26_1-p1 ; Align 582208 1 2112 ; Align 580096 706 1215 utg11_pilon exonerate:protein2genome:local gene 707703 708101 342 - . gene_id 0 ; sequence GL50803_10410-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 707703 708101 . - . utg11_pilon exonerate:protein2genome:local exon 707703 708101 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 707703 708101 342 - . alignment_id 0 ; Query GL50803_10410-t26_1-p1 ; Align 708102 46 399 utg11_pilon exonerate:protein2genome:local gene 1527435 1527707 234 - . gene_id 0 ; sequence GL50803_104104-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1527435 1527707 . - . utg11_pilon exonerate:protein2genome:local exon 1527435 1527707 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1527435 1527707 234 - . alignment_id 0 ; Query GL50803_104104-t26_1-p1 ; Align 1527708 1 273 utg64_pilon exonerate:protein2genome:local gene 792890 794356 2186 - . gene_id 0 ; sequence GL50803_104139-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 792890 794356 . - . utg64_pilon exonerate:protein2genome:local exon 792890 794356 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 792890 794356 2186 - . alignment_id 0 ; Query GL50803_104139-t26_1-p1 ; Align 794357 1 1467 utg731_pilon exonerate:protein2genome:local gene 274524 276557 3434 + . gene_id 0 ; sequence GL50803_104150-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 274524 276557 . + . utg731_pilon exonerate:protein2genome:local exon 274524 276557 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 274524 276557 3434 + . alignment_id 0 ; Query GL50803_104150-t26_1-p1 ; Align 274524 1 2034 utg308_pilon exonerate:protein2genome:local gene 720051 723545 5718 + . gene_id 0 ; sequence GL50803_104173-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 720051 723545 . + . utg308_pilon exonerate:protein2genome:local exon 720051 723545 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 720051 723545 5718 + . alignment_id 0 ; Query GL50803_104173-t26_1-p1 ; Align 720051 1 3495 utg308_pilon exonerate:protein2genome:local gene 685634 689695 5105 - . gene_id 0 ; sequence GL50803_104186-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 685634 689695 . - . utg308_pilon exonerate:protein2genome:local exon 685634 689695 . - . insertions 33 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 685634 689695 5105 - . alignment_id 0 ; Query GL50803_104186-t26_1-p1 ; Align 689696 1 1992 ; Align 687692 665 45 ; Align 687641 680 741 ; Align 686894 927 90 ; Align 686795 957 1161 utg349_pilon exonerate:protein2genome:local gene 1692935 1693252 226 + . gene_id 0 ; sequence GL50803_104193-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1692935 1693252 . + . utg349_pilon exonerate:protein2genome:local exon 1692935 1693252 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1692935 1693252 226 + . alignment_id 0 ; Query GL50803_104193-t26_1-p1 ; Align 1692935 3 318 utg11_pilon exonerate:protein2genome:local gene 433607 434257 1124 - . gene_id 0 ; sequence GL50803_10422-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 433607 434257 . - . utg11_pilon exonerate:protein2genome:local exon 433607 434257 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 433607 434257 1124 - . alignment_id 0 ; Query GL50803_10422-t26_1-p1 ; Align 434258 1 651 utg47_pilon exonerate:protein2genome:local gene 344315 344530 190 - . gene_id 0 ; sequence GL50803_104227-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 344315 344530 . - . utg47_pilon exonerate:protein2genome:local exon 344315 344530 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 344315 344530 190 - . alignment_id 0 ; Query GL50803_104227-t26_1-p1 ; Align 344531 1 216 utg11_pilon exonerate:protein2genome:local gene 434355 434804 727 + . gene_id 0 ; sequence GL50803_10423-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 434355 434804 . + . utg11_pilon exonerate:protein2genome:local exon 434355 434804 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 434355 434804 727 + . alignment_id 0 ; Query GL50803_10423-t26_1-p1 ; Align 434355 7 450 utg308_pilon exonerate:protein2genome:local gene 297596 298537 852 - . gene_id 0 ; sequence GL50803_104232-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 297596 298537 . - . utg308_pilon exonerate:protein2genome:local exon 297596 298537 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 297596 298537 852 - . alignment_id 0 ; Query GL50803_104232-t26_1-p1 ; Align 298538 1 942 utg308_pilon exonerate:protein2genome:local gene 843478 845364 2194 - . gene_id 0 ; sequence GL50803_104234-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 843478 845364 . - . utg308_pilon exonerate:protein2genome:local exon 843478 845364 . - . insertions 6 ; deletions 4 utg308_pilon exonerate:protein2genome:local similarity 843478 845364 2194 - . alignment_id 0 ; Query GL50803_104234-t26_1-p1 ; Align 845365 13 249 ; Align 845116 98 201 ; Align 844909 165 105 ; Align 844804 202 1326 utg308_pilon exonerate:protein2genome:local gene 886482 887693 1812 - . gene_id 0 ; sequence GL50803_104248-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 886482 887693 . - . utg308_pilon exonerate:protein2genome:local exon 886482 887693 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 886482 887693 1812 - . alignment_id 0 ; Query GL50803_104248-t26_1-p1 ; Align 887694 1 747 ; Align 886944 250 462 utg11_pilon exonerate:protein2genome:local gene 434895 435429 765 + . gene_id 0 ; sequence GL50803_10425-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 434895 434950 . + . utg11_pilon exonerate:protein2genome:local exon 434895 434950 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 434951 434952 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 434951 434987 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 434986 434987 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 434988 435429 . + . utg11_pilon exonerate:protein2genome:local exon 434988 435429 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 434895 435429 765 + . alignment_id 0 ; Query GL50803_10425-t26_1-p1 ; Align 434895 1 54 ; Align 434989 20 441 utg11_pilon exonerate:protein2genome:local gene 1166669 1167037 621 - . gene_id 0 ; sequence GL50803_104250-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1166669 1167037 . - . utg11_pilon exonerate:protein2genome:local exon 1166669 1167037 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1166669 1167037 621 - . alignment_id 0 ; Query GL50803_104250-t26_1-p1 ; Align 1167038 1 369 utg11_pilon exonerate:protein2genome:local gene 435463 435714 296 - . gene_id 0 ; sequence GL50803_10427-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 435463 435714 . - . utg11_pilon exonerate:protein2genome:local exon 435463 435714 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 435463 435714 296 - . alignment_id 0 ; Query GL50803_10427-t26_1-p1 ; Align 435715 1 252 utg11_pilon exonerate:protein2genome:local gene 435839 436468 1117 + . gene_id 0 ; sequence GL50803_10428-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 435839 436468 . + . utg11_pilon exonerate:protein2genome:local exon 435839 436468 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 435839 436468 1117 + . alignment_id 0 ; Query GL50803_10428-t26_1-p1 ; Align 435839 1 630 utg11_pilon exonerate:protein2genome:local gene 436511 437065 966 - . gene_id 0 ; sequence GL50803_10429-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 436511 437065 . - . utg11_pilon exonerate:protein2genome:local exon 436511 437065 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 436511 437065 966 - . alignment_id 0 ; Query GL50803_10429-t26_1-p1 ; Align 437066 1 555 utg212_pilon exonerate:protein2genome:local gene 398587 398785 133 - . gene_id 0 ; sequence GL50803_10431-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 398587 398785 . - . utg212_pilon exonerate:protein2genome:local exon 398587 398785 . - . insertions 3 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 398587 398785 133 - . alignment_id 0 ; Query GL50803_10431-t26_1-p1 ; Align 398786 11 69 ; Align 398716 34 42 ; Align 398671 48 84 utg64_pilon exonerate:protein2genome:local gene 321570 322280 962 + . gene_id 0 ; sequence GL50803_10444-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 321570 322280 . + . utg64_pilon exonerate:protein2genome:local exon 321570 322280 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 321570 322280 962 + . alignment_id 0 ; Query GL50803_10444-t26_1-p1 ; Align 321570 6 711 utg64_pilon exonerate:protein2genome:local gene 326338 326664 560 + . gene_id 0 ; sequence GL50803_10450-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 326338 326664 . + . utg64_pilon exonerate:protein2genome:local exon 326338 326664 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 326338 326664 560 + . alignment_id 0 ; Query GL50803_10450-t26_1-p1 ; Align 326338 1 327 utg64_pilon exonerate:protein2genome:local gene 326701 327240 744 - . gene_id 0 ; sequence GL50803_10452-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 326701 327240 . - . utg64_pilon exonerate:protein2genome:local exon 326701 327240 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 326701 327240 744 - . alignment_id 0 ; Query GL50803_10452-t26_1-p1 ; Align 327241 1 540 utg64_pilon exonerate:protein2genome:local gene 331848 333974 2457 - . gene_id 0 ; sequence GL50803_10455-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 331848 333974 . - . utg64_pilon exonerate:protein2genome:local exon 331848 333974 . - . insertions 9 ; deletions 7 utg64_pilon exonerate:protein2genome:local similarity 331848 333974 2457 - . alignment_id 0 ; Query GL50803_10455-t26_1-p1 ; Align 333975 1 435 ; Align 333540 149 57 ; Align 333480 168 120 ; Align 333354 208 621 ; Align 332733 416 186 ; Align 332547 481 699 utg64_pilon exonerate:protein2genome:local gene 340458 341027 962 - . gene_id 0 ; sequence GL50803_10459-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 340458 341027 . - . utg64_pilon exonerate:protein2genome:local exon 340458 341027 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 340458 341027 962 - . alignment_id 0 ; Query GL50803_10459-t26_1-p1 ; Align 341028 1 570 utg64_pilon exonerate:protein2genome:local gene 341145 342848 2145 - . gene_id 0 ; sequence GL50803_10460-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 341145 342848 . - . utg64_pilon exonerate:protein2genome:local exon 341145 342848 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 341145 342848 2145 - . alignment_id 0 ; Query GL50803_10460-t26_1-p1 ; Align 342849 1 1068 ; Align 341781 358 636 utg47_pilon exonerate:protein2genome:local gene 902736 903263 879 - . gene_id 0 ; sequence GL50803_104685-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 902736 903263 . - . utg47_pilon exonerate:protein2genome:local exon 902736 903263 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 902736 903263 879 - . alignment_id 0 ; Query GL50803_104685-t26_1-p1 ; Align 903264 1 528 utg349_pilon exonerate:protein2genome:local gene 1520213 1693111 110 + . gene_id 0 ; sequence GL50803_10474-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1520213 1520453 . + . utg349_pilon exonerate:protein2genome:local exon 1520213 1520453 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local splice5 1520454 1520455 . + . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 1520454 1692846 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1692845 1692846 . + . intron_id 0 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local cds 1692847 1693111 . + . utg349_pilon exonerate:protein2genome:local exon 1692847 1693111 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1520213 1693111 110 + . alignment_id 0 ; Query GL50803_10474-t26_1-p1 ; Align 1520213 4 51 ; Align 1520266 21 186 ; Align 1692848 84 102 ; Align 1692953 118 159 utg349_pilon exonerate:protein2genome:local gene 1390258 1390440 169 - . gene_id 0 ; sequence GL50803_104782-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1390258 1390440 . - . utg349_pilon exonerate:protein2genome:local exon 1390258 1390440 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1390258 1390440 169 - . alignment_id 0 ; Query GL50803_104782-t26_1-p1 ; Align 1390441 15 183 utg349_pilon exonerate:protein2genome:local gene 1272002 1272583 1024 - . gene_id 0 ; sequence GL50803_104866-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1272002 1272583 . - . utg349_pilon exonerate:protein2genome:local exon 1272002 1272583 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1272002 1272583 1024 - . alignment_id 0 ; Query GL50803_104866-t26_1-p1 ; Align 1272584 1 582 utg349_pilon exonerate:protein2genome:local gene 1292666 1293058 463 + . gene_id 0 ; sequence GL50803_104870-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1292666 1293058 . + . utg349_pilon exonerate:protein2genome:local exon 1292666 1293058 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1292666 1293058 463 + . alignment_id 0 ; Query GL50803_104870-t26_1-p1 ; Align 1292666 11 393 utg349_pilon exonerate:protein2genome:local gene 1293527 1293607 101 + . gene_id 0 ; sequence GL50803_104883-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1293527 1293607 . + . utg349_pilon exonerate:protein2genome:local exon 1293527 1293607 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1293527 1293607 101 + . alignment_id 0 ; Query GL50803_104883-t26_1-p1 ; Align 1293527 13 81 utg731_pilon exonerate:protein2genome:local gene 1013623 1013961 562 + . gene_id 0 ; sequence GL50803_104982-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1013623 1013961 . + . utg731_pilon exonerate:protein2genome:local exon 1013623 1013961 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1013623 1013961 562 + . alignment_id 0 ; Query GL50803_104982-t26_1-p1 ; Align 1013623 1 339 utg731_pilon exonerate:protein2genome:local gene 1009126 1009917 847 - . gene_id 0 ; sequence GL50803_104984-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1009126 1009917 . - . utg731_pilon exonerate:protein2genome:local exon 1009126 1009917 . - . insertions 3 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 1009126 1009917 847 - . alignment_id 0 ; Query GL50803_104984-t26_1-p1 ; Align 1009918 1 258 ; Align 1009660 88 126 ; Align 1009531 130 39 ; Align 1009492 144 216 ; Align 1009276 218 150 utg11_pilon exonerate:protein2genome:local gene 1615023 1615421 544 - . gene_id 0 ; sequence GL50803_104994-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1615023 1615421 . - . utg11_pilon exonerate:protein2genome:local exon 1615023 1615421 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1615023 1615421 544 - . alignment_id 0 ; Query GL50803_104994-t26_1-p1 ; Align 1615422 1 399 utg308_pilon exonerate:protein2genome:local gene 417906 418994 1726 - . gene_id 0 ; sequence GL50803_10516-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 417906 418994 . - . utg308_pilon exonerate:protein2genome:local exon 417906 418994 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 417906 418994 1726 - . alignment_id 0 ; Query GL50803_10516-t26_1-p1 ; Align 418995 1 1089 utg47_pilon exonerate:protein2genome:local gene 140170 142032 2925 + . gene_id 0 ; sequence GL50803_10521-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 140170 142032 . + . utg47_pilon exonerate:protein2genome:local exon 140170 142032 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 140170 142032 2925 + . alignment_id 0 ; Query GL50803_10521-t26_1-p1 ; Align 140170 1 1863 utg47_pilon exonerate:protein2genome:local gene 142079 142930 1267 - . gene_id 0 ; sequence GL50803_10522-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 142079 142930 . - . utg47_pilon exonerate:protein2genome:local exon 142079 142930 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 142079 142930 1267 - . alignment_id 0 ; Query GL50803_10522-t26_1-p1 ; Align 142931 1 852 utg47_pilon exonerate:protein2genome:local gene 143964 144662 1112 + . gene_id 0 ; sequence GL50803_10524-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 143964 144662 . + . utg47_pilon exonerate:protein2genome:local exon 143964 144662 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 143964 144662 1112 + . alignment_id 0 ; Query GL50803_10524-t26_1-p1 ; Align 143964 1 699 utg47_pilon exonerate:protein2genome:local gene 145870 146824 1401 + . gene_id 0 ; sequence GL50803_10527-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 145870 146824 . + . utg47_pilon exonerate:protein2genome:local exon 145870 146824 . + . insertions 9 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 145870 146824 1401 + . alignment_id 0 ; Query GL50803_10527-t26_1-p1 ; Align 145870 1 105 ; Align 145981 36 249 ; Align 146231 119 57 ; Align 146291 138 534 utg47_pilon exonerate:protein2genome:local gene 147519 148793 1924 - . gene_id 0 ; sequence GL50803_10529-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 147519 148793 . - . utg47_pilon exonerate:protein2genome:local exon 147519 148793 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 147519 148793 1924 - . alignment_id 0 ; Query GL50803_10529-t26_1-p1 ; Align 148794 1 1275 utg47_pilon exonerate:protein2genome:local gene 148878 149405 810 + . gene_id 0 ; sequence GL50803_10530-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 148878 149405 . + . utg47_pilon exonerate:protein2genome:local exon 148878 149405 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 148878 149405 810 + . alignment_id 0 ; Query GL50803_10530-t26_1-p1 ; Align 148878 2 528 utg47_pilon exonerate:protein2genome:local gene 156546 156764 281 - . gene_id 0 ; sequence GL50803_10534-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 156546 156764 . - . utg47_pilon exonerate:protein2genome:local exon 156546 156764 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 156546 156764 281 - . alignment_id 0 ; Query GL50803_10534-t26_1-p1 ; Align 156765 3 45 ; Align 156720 19 174 utg47_pilon exonerate:protein2genome:local gene 161438 163591 3645 - . gene_id 0 ; sequence GL50803_10538-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 161438 163591 . - . utg47_pilon exonerate:protein2genome:local exon 161438 163591 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 161438 163591 3645 - . alignment_id 0 ; Query GL50803_10538-t26_1-p1 ; Align 163592 1 2154 utg11_pilon exonerate:protein2genome:local gene 475988 477079 1588 - . gene_id 0 ; sequence GL50803_10551-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 475988 477079 . - . utg11_pilon exonerate:protein2genome:local exon 475988 477079 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 475988 477079 1588 - . alignment_id 0 ; Query GL50803_10551-t26_1-p1 ; Align 477080 1 1092 utg11_pilon exonerate:protein2genome:local gene 474378 475985 2550 + . gene_id 0 ; sequence GL50803_10552-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 474378 475985 . + . utg11_pilon exonerate:protein2genome:local exon 474378 475985 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 474378 475985 2550 + . alignment_id 0 ; Query GL50803_10552-t26_1-p1 ; Align 474378 1 1608 utg47_pilon exonerate:protein2genome:local gene 1745191 1748336 383 - . gene_id 0 ; sequence GL50803_10562-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1748149 1748336 . - . utg47_pilon exonerate:protein2genome:local exon 1748149 1748336 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1748147 1748148 . - . intron_id 1 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local intron 1745387 1748148 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1745387 1745388 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1745191 1745386 . - . utg47_pilon exonerate:protein2genome:local exon 1745191 1745386 . - . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1745191 1748336 383 - . alignment_id 0 ; Query GL50803_10562-t26_1-p1 ; Align 1748337 60 186 ; Align 1745386 123 51 ; Align 1745332 140 24 ; Align 1745305 148 114 utg11_pilon exonerate:protein2genome:local gene 648496 648627 164 - . gene_id 0 ; sequence GL50803_105661-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 648496 648627 . - . utg11_pilon exonerate:protein2genome:local exon 648496 648627 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 648496 648627 164 - . alignment_id 0 ; Query GL50803_105661-t26_1-p1 ; Align 648628 1 132 utg64_pilon exonerate:protein2genome:local gene 369705 369836 164 + . gene_id 0 ; sequence GL50803_105661-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 369705 369836 . + . utg64_pilon exonerate:protein2genome:local exon 369705 369836 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 369705 369836 164 + . alignment_id 0 ; Query GL50803_105661-t26_1-p1 ; Align 369705 1 132 utg64_pilon exonerate:protein2genome:local gene 356417 356548 164 - . gene_id 0 ; sequence GL50803_105661-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 356417 356548 . - . utg64_pilon exonerate:protein2genome:local exon 356417 356548 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 356417 356548 164 - . alignment_id 0 ; Query GL50803_105661-t26_1-p1 ; Align 356549 1 132 utg212_pilon exonerate:protein2genome:local gene 406265 406396 164 + . gene_id 0 ; sequence GL50803_105661-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 406265 406396 . + . utg212_pilon exonerate:protein2genome:local exon 406265 406396 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 406265 406396 164 + . alignment_id 0 ; Query GL50803_105661-t26_1-p1 ; Align 406265 1 132 utg308_pilon exonerate:protein2genome:local gene 826718 826849 164 + . gene_id 0 ; sequence GL50803_105661-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 826718 826849 . + . utg308_pilon exonerate:protein2genome:local exon 826718 826849 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 826718 826849 164 + . alignment_id 0 ; Query GL50803_105661-t26_1-p1 ; Align 826718 1 132 utg349_pilon exonerate:protein2genome:local gene 1438681 1438812 164 - . gene_id 0 ; sequence GL50803_105661-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1438681 1438812 . - . utg349_pilon exonerate:protein2genome:local exon 1438681 1438812 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1438681 1438812 164 - . alignment_id 0 ; Query GL50803_105661-t26_1-p1 ; Align 1438813 1 132 utg731_pilon exonerate:protein2genome:local gene 69569 69700 164 + . gene_id 0 ; sequence GL50803_105661-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 69569 69700 . + . utg731_pilon exonerate:protein2genome:local exon 69569 69700 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 69569 69700 164 + . alignment_id 0 ; Query GL50803_105661-t26_1-p1 ; Align 69569 1 132 utg64_pilon exonerate:protein2genome:local gene 892165 893220 1654 - . gene_id 0 ; sequence GL50803_10568-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 892165 893220 . - . utg64_pilon exonerate:protein2genome:local exon 892165 893220 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 892165 893220 1654 - . alignment_id 0 ; Query GL50803_10568-t26_1-p1 ; Align 893221 1 1056 utg64_pilon exonerate:protein2genome:local gene 893338 894852 2382 - . gene_id 0 ; sequence GL50803_10569-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 893338 894852 . - . utg64_pilon exonerate:protein2genome:local exon 893338 894852 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 893338 894852 2382 - . alignment_id 0 ; Query GL50803_10569-t26_1-p1 ; Align 894853 1 1515 utg64_pilon exonerate:protein2genome:local gene 894882 895949 1554 + . gene_id 0 ; sequence GL50803_10570-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 894882 895949 . + . utg64_pilon exonerate:protein2genome:local exon 894882 895949 . + . insertions 6 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 894882 895949 1554 + . alignment_id 0 ; Query GL50803_10570-t26_1-p1 ; Align 894882 1 513 ; Align 895398 172 39 ; Align 895440 185 510 utg64_pilon exonerate:protein2genome:local gene 895969 898257 2802 - . gene_id 0 ; sequence GL50803_10571-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 895969 898257 . - . utg64_pilon exonerate:protein2genome:local exon 895969 898257 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 895969 898257 2802 - . alignment_id 0 ; Query GL50803_10571-t26_1-p1 ; Align 898258 2 708 ; Align 897550 239 1581 utg64_pilon exonerate:protein2genome:local gene 898333 899310 1246 + . gene_id 0 ; sequence GL50803_10572-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 898333 899310 . + . utg64_pilon exonerate:protein2genome:local exon 898333 899310 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 898333 899310 1246 + . alignment_id 0 ; Query GL50803_10572-t26_1-p1 ; Align 898333 1 264 ; Align 898600 89 711 utg64_pilon exonerate:protein2genome:local gene 899378 900484 1327 - . gene_id 0 ; sequence GL50803_10573-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 899378 900484 . - . utg64_pilon exonerate:protein2genome:local exon 899378 900484 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 899378 900484 1327 - . alignment_id 0 ; Query GL50803_10573-t26_1-p1 ; Align 900485 1 1107 utg212_pilon exonerate:protein2genome:local gene 14045 115880 614 + . gene_id 0 ; sequence GL50803_105759-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14045 14449 . + . utg212_pilon exonerate:protein2genome:local exon 14045 14449 . + . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local splice5 14450 14451 . + . intron_id 1 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local intron 14450 115739 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115738 115739 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115740 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115740 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14045 115880 614 + . alignment_id 0 ; Query GL50803_105759-t26_1-p1 ; Align 14045 1 81 ; Align 14126 29 324 ; Align 115740 137 141 utg64_pilon exonerate:protein2genome:local gene 904368 905852 2281 + . gene_id 0 ; sequence GL50803_10577-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 904368 905852 . + . utg64_pilon exonerate:protein2genome:local exon 904368 905852 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 904368 905852 2281 + . alignment_id 0 ; Query GL50803_10577-t26_1-p1 ; Align 904368 1 1485 utg349_pilon exonerate:protein2genome:local gene 90425 495451 373 + . gene_id 0 ; sequence GL50803_105782-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 90425 90537 . + . utg349_pilon exonerate:protein2genome:local exon 90425 90537 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 90538 90539 . + . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 90538 229245 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 229244 229245 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 229246 229494 . + . utg349_pilon exonerate:protein2genome:local exon 229246 229494 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 229495 229496 . + . intron_id 2 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 229495 383180 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 383179 383180 . + . intron_id 1 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local cds 383181 383226 . + . utg349_pilon exonerate:protein2genome:local exon 383181 383226 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 383227 383228 . + . intron_id 3 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 383227 495298 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 495297 495298 . + . intron_id 2 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 495299 495451 . + . utg349_pilon exonerate:protein2genome:local exon 495299 495451 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 90425 495451 373 + . alignment_id 0 ; Query GL50803_105782-t26_1-p1 ; Align 90425 1 111 ; Align 229247 39 51 ; Align 229298 57 195 ; Align 383182 123 45 ; Align 495299 138 153 utg64_pilon exonerate:protein2genome:local gene 281086 291619 303 - . gene_id 0 ; sequence GL50803_105786-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 291552 291619 . - . utg64_pilon exonerate:protein2genome:local exon 291552 291619 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 291550 291551 . - . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 281387 291551 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 281387 281388 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 281086 281386 . - . utg64_pilon exonerate:protein2genome:local exon 281086 281386 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 281086 291619 303 - . alignment_id 0 ; Query GL50803_105786-t26_1-p1 ; Align 291620 2 66 ; Align 281386 25 300 utg265_pilon exonerate:protein2genome:local gene 922212 922352 118 + . gene_id 0 ; sequence GL50803_105788-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 922212 922352 . + . utg265_pilon exonerate:protein2genome:local exon 922212 922352 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 922212 922352 118 + . alignment_id 0 ; Query GL50803_105788-t26_1-p1 ; Align 922212 1 141 utg64_pilon exonerate:protein2genome:local gene 766760 847645 321 + . gene_id 0 ; sequence GL50803_105798-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 766760 766915 . + . utg64_pilon exonerate:protein2genome:local exon 766760 766915 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 766916 766917 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 766916 847474 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 847473 847474 . + . intron_id 0 ; splice_site "AC" utg64_pilon exonerate:protein2genome:local cds 847475 847645 . + . utg64_pilon exonerate:protein2genome:local exon 847475 847645 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 766760 847645 321 + . alignment_id 0 ; Query GL50803_105798-t26_1-p1 ; Align 766760 2 156 ; Align 847475 54 171 utg64_pilon exonerate:protein2genome:local gene 152280 291646 364 - . gene_id 0 ; sequence GL50803_105806-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 291510 291646 . - . utg64_pilon exonerate:protein2genome:local exon 291510 291646 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 291508 291509 . - . intron_id 1 ; splice_site "GA" utg64_pilon exonerate:protein2genome:local intron 152545 291509 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 152545 152546 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 152280 152544 . - . utg64_pilon exonerate:protein2genome:local exon 152280 152544 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 152280 291646 364 - . alignment_id 0 ; Query GL50803_105806-t26_1-p1 ; Align 291647 1 135 ; Align 152544 47 264 utg47_pilon exonerate:protein2genome:local gene 1621935 1622132 196 - . gene_id 0 ; sequence GL50803_105823-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1621935 1622132 . - . utg47_pilon exonerate:protein2genome:local exon 1621935 1622132 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1621935 1622132 196 - . alignment_id 0 ; Query GL50803_105823-t26_1-p1 ; Align 1622133 1 198 utg7494_pilon exonerate:protein2genome:local gene 13246 15566 443 + . gene_id 0 ; sequence GL50803_10587-t26_1-p1 ; gene_orientation + utg7494_pilon exonerate:protein2genome:local cds 13246 13593 . + . utg7494_pilon exonerate:protein2genome:local exon 13246 13593 . + . insertions 0 ; deletions 0 utg7494_pilon exonerate:protein2genome:local splice5 13594 13595 . + . intron_id 1 ; splice_site "AT" utg7494_pilon exonerate:protein2genome:local intron 13594 15329 . + . intron_id 1 utg7494_pilon exonerate:protein2genome:local splice3 15328 15329 . + . intron_id 0 ; splice_site "AG" utg7494_pilon exonerate:protein2genome:local cds 15330 15566 . + . utg7494_pilon exonerate:protein2genome:local exon 15330 15566 . + . insertions 0 ; deletions 0 utg7494_pilon exonerate:protein2genome:local similarity 13246 15566 443 + . alignment_id 0 ; Query GL50803_10587-t26_1-p1 ; Align 13246 1 348 ; Align 15330 117 237 utg47_pilon exonerate:protein2genome:local gene 171641 171742 131 + . gene_id 0 ; sequence GL50803_10589-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 171641 171742 . + . utg47_pilon exonerate:protein2genome:local exon 171641 171742 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 171641 171742 131 + . alignment_id 0 ; Query GL50803_10589-t26_1-p1 ; Align 171641 1 102 utg47_pilon exonerate:protein2genome:local gene 181029 181130 131 - . gene_id 0 ; sequence GL50803_10589-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 181029 181130 . - . utg47_pilon exonerate:protein2genome:local exon 181029 181130 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 181029 181130 131 - . alignment_id 0 ; Query GL50803_10589-t26_1-p1 ; Align 181131 1 102 utg308_pilon exonerate:protein2genome:local gene 313082 313345 313 + . gene_id 0 ; sequence GL50803_105903-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 313082 313345 . + . utg308_pilon exonerate:protein2genome:local exon 313082 313345 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 313082 313345 313 + . alignment_id 0 ; Query GL50803_105903-t26_1-p1 ; Align 313082 2 264 utg349_pilon exonerate:protein2genome:local gene 1333461 1333604 105 - . gene_id 0 ; sequence GL50803_105907-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1333461 1333604 . - . utg349_pilon exonerate:protein2genome:local exon 1333461 1333604 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1333461 1333604 105 - . alignment_id 0 ; Query GL50803_105907-t26_1-p1 ; Align 1333605 2 57 ; Align 1333545 21 84 utg349_pilon exonerate:protein2genome:local gene 1301318 1301711 336 - . gene_id 0 ; sequence GL50803_105909-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1301318 1301711 . - . utg349_pilon exonerate:protein2genome:local exon 1301318 1301711 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 1301318 1301711 336 - . alignment_id 0 ; Query GL50803_105909-t26_1-p1 ; Align 1301712 1 183 ; Align 1301528 62 210 utg349_pilon exonerate:protein2genome:local gene 1279165 1279281 146 + . gene_id 0 ; sequence GL50803_105911-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1279165 1279281 . + . utg349_pilon exonerate:protein2genome:local exon 1279165 1279281 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1279165 1279281 146 + . alignment_id 0 ; Query GL50803_105911-t26_1-p1 ; Align 1279165 1 117 utg349_pilon exonerate:protein2genome:local gene 1272113 1272505 496 + . gene_id 0 ; sequence GL50803_105913-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1272113 1272505 . + . utg349_pilon exonerate:protein2genome:local exon 1272113 1272505 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1272113 1272505 496 + . alignment_id 0 ; Query GL50803_105913-t26_1-p1 ; Align 1272113 1 393 utg349_pilon exonerate:protein2genome:local gene 1270476 1270613 165 - . gene_id 0 ; sequence GL50803_105915-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1270476 1270613 . - . utg349_pilon exonerate:protein2genome:local exon 1270476 1270613 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1270476 1270613 165 - . alignment_id 0 ; Query GL50803_105915-t26_1-p1 ; Align 1270614 1 138 utg212_pilon exonerate:protein2genome:local gene 14045 115880 639 + . gene_id 0 ; sequence GL50803_105983-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14045 14449 . + . utg212_pilon exonerate:protein2genome:local exon 14045 14449 . + . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local splice5 14450 14451 . + . intron_id 1 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local intron 14450 115739 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115738 115739 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115740 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115740 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14045 115880 639 + . alignment_id 0 ; Query GL50803_105983-t26_1-p1 ; Align 14045 1 81 ; Align 14126 29 324 ; Align 115740 137 141 utg731_pilon exonerate:protein2genome:local gene 1010467 1010586 109 - . gene_id 0 ; sequence GL50803_106010-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1010467 1010586 . - . utg731_pilon exonerate:protein2genome:local exon 1010467 1010586 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1010467 1010586 109 - . alignment_id 0 ; Query GL50803_106010-t26_1-p1 ; Align 1010587 1 120 utg99_pilon exonerate:protein2genome:local gene 101681 103054 1747 + . gene_id 0 ; sequence GL50803_10605-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 101681 103054 . + . utg99_pilon exonerate:protein2genome:local exon 101681 103054 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 101681 103054 1747 + . alignment_id 0 ; Query GL50803_10605-t26_1-p1 ; Align 101681 1 1374 utg99_pilon exonerate:protein2genome:local gene 103098 103877 1302 + . gene_id 0 ; sequence GL50803_10606-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 103098 103877 . + . utg99_pilon exonerate:protein2genome:local exon 103098 103877 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 103098 103877 1302 + . alignment_id 0 ; Query GL50803_10606-t26_1-p1 ; Align 103098 1 780 utg99_pilon exonerate:protein2genome:local gene 104008 106791 4313 - . gene_id 0 ; sequence GL50803_10608-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 104008 106791 . - . utg99_pilon exonerate:protein2genome:local exon 104008 106791 . - . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 104008 106791 4313 - . alignment_id 0 ; Query GL50803_10608-t26_1-p1 ; Align 106792 1 687 ; Align 106105 231 2097 utg99_pilon exonerate:protein2genome:local gene 106988 108256 2053 + . gene_id 0 ; sequence GL50803_10609-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 106988 108256 . + . utg99_pilon exonerate:protein2genome:local exon 106988 108256 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 106988 108256 2053 + . alignment_id 0 ; Query GL50803_10609-t26_1-p1 ; Align 106988 1 1269 utg349_pilon exonerate:protein2genome:local gene 1259959 1260060 146 + . gene_id 0 ; sequence GL50803_106093-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1259959 1260060 . + . utg349_pilon exonerate:protein2genome:local exon 1259959 1260060 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1259959 1260060 146 + . alignment_id 0 ; Query GL50803_106093-t26_1-p1 ; Align 1259959 1 102 utg349_pilon exonerate:protein2genome:local gene 1252374 1252562 157 + . gene_id 0 ; sequence GL50803_106115-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1252374 1252562 . + . utg349_pilon exonerate:protein2genome:local exon 1252374 1252562 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1252374 1252562 157 + . alignment_id 0 ; Query GL50803_106115-t26_1-p1 ; Align 1252374 2 189 utg99_pilon exonerate:protein2genome:local gene 111636 112559 1582 - . gene_id 0 ; sequence GL50803_10612-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 111636 112559 . - . utg99_pilon exonerate:protein2genome:local exon 111636 112559 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 111636 112559 1582 - . alignment_id 0 ; Query GL50803_10612-t26_1-p1 ; Align 112560 1 924 utg349_pilon exonerate:protein2genome:local gene 1335852 1335956 171 + . gene_id 0 ; sequence GL50803_106126-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1335852 1335956 . + . utg349_pilon exonerate:protein2genome:local exon 1335852 1335956 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1335852 1335956 171 + . alignment_id 0 ; Query GL50803_106126-t26_1-p1 ; Align 1335852 2 105 utg349_pilon exonerate:protein2genome:local gene 1365024 1365200 168 + . gene_id 0 ; sequence GL50803_106128-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1365024 1365200 . + . utg349_pilon exonerate:protein2genome:local exon 1365024 1365200 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1365024 1365200 168 + . alignment_id 0 ; Query GL50803_106128-t26_1-p1 ; Align 1365024 1 93 ; Align 1365117 33 84 utg64_pilon exonerate:protein2genome:local gene 492944 493315 552 - . gene_id 0 ; sequence GL50803_10613-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 492944 493315 . - . utg64_pilon exonerate:protein2genome:local exon 492944 493315 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 492944 493315 552 - . alignment_id 0 ; Query GL50803_10613-t26_1-p1 ; Align 493316 1 372 utg349_pilon exonerate:protein2genome:local gene 1369646 1369996 376 + . gene_id 0 ; sequence GL50803_106130-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1369646 1369996 . + . utg349_pilon exonerate:protein2genome:local exon 1369646 1369996 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1369646 1369996 376 + . alignment_id 0 ; Query GL50803_106130-t26_1-p1 ; Align 1369646 1 351 utg349_pilon exonerate:protein2genome:local gene 1336690 1336890 165 + . gene_id 0 ; sequence GL50803_106135-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1336690 1336890 . + . utg349_pilon exonerate:protein2genome:local exon 1336690 1336890 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1336690 1336890 165 + . alignment_id 0 ; Query GL50803_106135-t26_1-p1 ; Align 1336690 1 201 utg349_pilon exonerate:protein2genome:local gene 1391841 1392089 231 + . gene_id 0 ; sequence GL50803_106137-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1391841 1392089 . + . utg349_pilon exonerate:protein2genome:local exon 1391841 1392089 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1391841 1392089 231 + . alignment_id 0 ; Query GL50803_106137-t26_1-p1 ; Align 1391841 1 249 utg349_pilon exonerate:protein2genome:local gene 1322978 1323358 413 + . gene_id 0 ; sequence GL50803_106139-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1322978 1323358 . + . utg349_pilon exonerate:protein2genome:local exon 1322978 1323358 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1322978 1323358 413 + . alignment_id 0 ; Query GL50803_106139-t26_1-p1 ; Align 1322978 1 381 utg731_pilon exonerate:protein2genome:local gene 1163368 1165329 3311 + . gene_id 0 ; sequence GL50803_10623-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1163368 1165329 . + . utg731_pilon exonerate:protein2genome:local exon 1163368 1165329 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1163368 1165329 3311 + . alignment_id 0 ; Query GL50803_10623-t26_1-p1 ; Align 1163368 1 1962 utg731_pilon exonerate:protein2genome:local gene 1013785 1013913 123 - . gene_id 0 ; sequence GL50803_106243-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1013785 1013913 . - . utg731_pilon exonerate:protein2genome:local exon 1013785 1013913 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1013785 1013913 123 - . alignment_id 0 ; Query GL50803_106243-t26_1-p1 ; Align 1013914 1 129 utg731_pilon exonerate:protein2genome:local gene 1351351 1354241 3458 + . gene_id 0 ; sequence GL50803_10632-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1351351 1354241 . + . utg731_pilon exonerate:protein2genome:local exon 1351351 1354241 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 1351351 1354241 3458 + . alignment_id 0 ; Query GL50803_10632-t26_1-p1 ; Align 1351351 39 2091 ; Align 1353444 737 582 ; Align 1354026 932 216 utg308_pilon exonerate:protein2genome:local gene 308476 309120 1119 - . gene_id 0 ; sequence GL50803_106320-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 308476 309120 . - . utg308_pilon exonerate:protein2genome:local exon 308476 309120 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 308476 309120 1119 - . alignment_id 0 ; Query GL50803_106320-t26_1-p1 ; Align 309121 1 645 utg64_pilon exonerate:protein2genome:local gene 159384 160356 353 + . gene_id 0 ; sequence GL50803_106496-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 159384 159537 . + . utg64_pilon exonerate:protein2genome:local exon 159384 159537 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 159538 159539 . + . intron_id 1 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 159538 159982 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 159981 159982 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 159983 160356 . + . utg64_pilon exonerate:protein2genome:local exon 159983 160356 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 159384 160356 353 + . alignment_id 0 ; Query GL50803_106496-t26_1-p1 ; Align 159384 1 153 ; Align 159985 53 177 ; Align 160165 112 192 utg265_pilon exonerate:protein2genome:local gene 99932 100255 235 - . gene_id 0 ; sequence GL50803_106498-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 99932 100255 . - . utg265_pilon exonerate:protein2genome:local exon 99932 100255 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 99932 100255 235 - . alignment_id 0 ; Query GL50803_106498-t26_1-p1 ; Align 100256 6 324 utg349_pilon exonerate:protein2genome:local gene 1246088 1246342 279 + . gene_id 0 ; sequence GL50803_106533-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1246088 1246342 . + . utg349_pilon exonerate:protein2genome:local exon 1246088 1246342 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1246088 1246342 279 + . alignment_id 0 ; Query GL50803_106533-t26_1-p1 ; Align 1246088 5 255 utg349_pilon exonerate:protein2genome:local gene 82105 548186 1921 - . gene_id 0 ; sequence GL50803_10659-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 548018 548186 . - . utg349_pilon exonerate:protein2genome:local exon 548018 548186 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 548016 548017 . - . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 496968 548017 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 496968 496969 . - . intron_id 0 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local cds 496216 496967 . - . utg349_pilon exonerate:protein2genome:local exon 496216 496967 . - . insertions 3 ; deletions 7 utg349_pilon exonerate:protein2genome:local splice5 496214 496215 . - . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 299647 496215 . - . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 299647 299648 . - . intron_id 1 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 299610 299646 . - . utg349_pilon exonerate:protein2genome:local exon 299610 299646 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 299608 299609 . - . intron_id 3 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 230175 299609 . - . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 230175 230176 . - . intron_id 2 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 230166 230174 . - . utg349_pilon exonerate:protein2genome:local exon 230166 230174 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 230164 230165 . - . intron_id 4 ; splice_site "CT" utg349_pilon exonerate:protein2genome:local intron 89823 230165 . - . intron_id 4 utg349_pilon exonerate:protein2genome:local splice3 89823 89824 . - . intron_id 3 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 88791 89822 . - . utg349_pilon exonerate:protein2genome:local exon 88791 89822 . - . insertions 12 ; deletions 6 utg349_pilon exonerate:protein2genome:local splice5 88789 88790 . - . intron_id 5 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 82227 88790 . - . intron_id 5 utg349_pilon exonerate:protein2genome:local splice3 82227 82228 . - . intron_id 4 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 82105 82226 . - . utg349_pilon exonerate:protein2genome:local exon 82105 82226 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 82105 548186 1921 - . alignment_id 0 ; Query GL50803_10659-t26_1-p1 ; Align 548187 8 45 ; Align 548142 24 123 ; Align 496966 66 264 ; Align 496699 154 204 ; Align 496495 225 156 ; Align 496339 279 72 ; Align 496267 305 51 ; Align 299647 322 36 ; Align 230173 335 6 ; Align 89821 338 276 ; Align 89542 430 159 ; Align 89374 483 153 ; Align 89221 536 87 ; Align 89134 569 342 ; Align 82225 684 120 utg47_pilon exonerate:protein2genome:local gene 1706615 1709890 5069 - . gene_id 0 ; sequence GL50803_10661-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1706615 1709890 . - . utg47_pilon exonerate:protein2genome:local exon 1706615 1709890 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1706615 1709890 5069 - . alignment_id 0 ; Query GL50803_10661-t26_1-p1 ; Align 1709891 1 3276 utg47_pilon exonerate:protein2genome:local gene 1712026 1713246 1941 - . gene_id 0 ; sequence GL50803_10666-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1712026 1713246 . - . utg47_pilon exonerate:protein2genome:local exon 1712026 1713246 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1712026 1713246 1941 - . alignment_id 0 ; Query GL50803_10666-t26_1-p1 ; Align 1713247 1 1221 utg47_pilon exonerate:protein2genome:local gene 1713304 1713774 732 - . gene_id 0 ; sequence GL50803_10667-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1713304 1713774 . - . utg47_pilon exonerate:protein2genome:local exon 1713304 1713774 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1713304 1713774 732 - . alignment_id 0 ; Query GL50803_10667-t26_1-p1 ; Align 1713775 1 471 utg731_pilon exonerate:protein2genome:local gene 338550 338912 332 + . gene_id 0 ; sequence GL50803_106673-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 338550 338912 . + . utg731_pilon exonerate:protein2genome:local exon 338550 338912 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 338550 338912 332 + . alignment_id 0 ; Query GL50803_106673-t26_1-p1 ; Align 338550 1 363 utg731_pilon exonerate:protein2genome:local gene 332780 333142 332 - . gene_id 0 ; sequence GL50803_106673-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 332780 333142 . - . utg731_pilon exonerate:protein2genome:local exon 332780 333142 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 332780 333142 332 - . alignment_id 0 ; Query GL50803_106673-t26_1-p1 ; Align 333143 1 363 utg349_pilon exonerate:protein2genome:local gene 1133866 1136223 3280 - . gene_id 0 ; sequence GL50803_10675-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1133866 1136223 . - . utg349_pilon exonerate:protein2genome:local exon 1133866 1136223 . - . insertions 6 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 1133866 1136223 3280 - . alignment_id 0 ; Query GL50803_10675-t26_1-p1 ; Align 1136224 1 1089 ; Align 1135132 364 381 ; Align 1134751 492 525 ; Align 1134226 668 27 ; Align 1134199 680 204 ; Align 1133992 748 126 utg349_pilon exonerate:protein2genome:local gene 1131677 1133821 2972 - . gene_id 0 ; sequence GL50803_10676-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1131677 1133821 . - . utg349_pilon exonerate:protein2genome:local exon 1131677 1133821 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1131677 1133821 2972 - . alignment_id 0 ; Query GL50803_10676-t26_1-p1 ; Align 1133822 1 1281 ; Align 1132538 428 861 utg349_pilon exonerate:protein2genome:local gene 1131088 1131672 749 - . gene_id 0 ; sequence GL50803_10677-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1131088 1131672 . - . utg349_pilon exonerate:protein2genome:local exon 1131088 1131672 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1131088 1131672 749 - . alignment_id 0 ; Query GL50803_10677-t26_1-p1 ; Align 1131673 1 585 utg349_pilon exonerate:protein2genome:local gene 1130424 1130843 607 + . gene_id 0 ; sequence GL50803_10679-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1130424 1130843 . + . utg349_pilon exonerate:protein2genome:local exon 1130424 1130843 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1130424 1130843 607 + . alignment_id 0 ; Query GL50803_10679-t26_1-p1 ; Align 1130424 1 420 utg349_pilon exonerate:protein2genome:local gene 1129053 1130390 1731 + . gene_id 0 ; sequence GL50803_10680-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1129053 1130390 . + . utg349_pilon exonerate:protein2genome:local exon 1129053 1130390 . + . insertions 12 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1129053 1130390 1731 + . alignment_id 0 ; Query GL50803_10680-t26_1-p1 ; Align 1129053 1 471 ; Align 1129533 158 60 ; Align 1129596 178 207 ; Align 1129803 248 588 utg349_pilon exonerate:protein2genome:local gene 1117203 1117982 970 - . gene_id 0 ; sequence GL50803_10682-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1117203 1117982 . - . utg349_pilon exonerate:protein2genome:local exon 1117203 1117982 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1117203 1117982 970 - . alignment_id 0 ; Query GL50803_10682-t26_1-p1 ; Align 1117983 1 780 utg64_pilon exonerate:protein2genome:local gene 695635 695832 160 - . gene_id 0 ; sequence GL50803_10686-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 695635 695832 . - . utg64_pilon exonerate:protein2genome:local exon 695635 695832 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 695635 695832 160 - . alignment_id 0 ; Query GL50803_10686-t26_1-p1 ; Align 695833 2 69 ; Align 695761 25 126 utg308_pilon exonerate:protein2genome:local gene 100462 100800 504 + . gene_id 0 ; sequence GL50803_10696-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 100462 100800 . + . utg308_pilon exonerate:protein2genome:local exon 100462 100800 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 100462 100800 504 + . alignment_id 0 ; Query GL50803_10696-t26_1-p1 ; Align 100462 1 339 utg308_pilon exonerate:protein2genome:local gene 100946 101986 1576 + . gene_id 0 ; sequence GL50803_10697-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 100946 101986 . + . utg308_pilon exonerate:protein2genome:local exon 100946 101986 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 100946 101986 1576 + . alignment_id 0 ; Query GL50803_10697-t26_1-p1 ; Align 100946 1 1041 utg308_pilon exonerate:protein2genome:local gene 102319 104637 3662 - . gene_id 0 ; sequence GL50803_10698-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 102319 104637 . - . utg308_pilon exonerate:protein2genome:local exon 102319 104637 . - . insertions 9 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 102319 104637 3662 - . alignment_id 0 ; Query GL50803_10698-t26_1-p1 ; Align 104638 1 1083 ; Align 103546 362 1227 utg308_pilon exonerate:protein2genome:local gene 106535 106762 158 - . gene_id 0 ; sequence GL50803_10699-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 106535 106762 . - . utg308_pilon exonerate:protein2genome:local exon 106535 106762 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 106535 106762 158 - . alignment_id 0 ; Query GL50803_10699-t26_1-p1 ; Align 106763 1 228 utg308_pilon exonerate:protein2genome:local gene 113346 114485 1802 - . gene_id 0 ; sequence GL50803_10703-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 113346 114485 . - . utg308_pilon exonerate:protein2genome:local exon 113346 114485 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 113346 114485 1802 - . alignment_id 0 ; Query GL50803_10703-t26_1-p1 ; Align 114486 1 1140 utg308_pilon exonerate:protein2genome:local gene 114520 115938 2020 - . gene_id 0 ; sequence GL50803_10705-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 114520 115938 . - . utg308_pilon exonerate:protein2genome:local exon 114520 115938 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 114520 115938 2020 - . alignment_id 0 ; Query GL50803_10705-t26_1-p1 ; Align 115939 1 1419 utg308_pilon exonerate:protein2genome:local gene 116243 117919 2724 - . gene_id 0 ; sequence GL50803_10707-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 116243 117919 . - . utg308_pilon exonerate:protein2genome:local exon 116243 117919 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 116243 117919 2724 - . alignment_id 0 ; Query GL50803_10707-t26_1-p1 ; Align 117920 1 1677 utg308_pilon exonerate:protein2genome:local gene 117958 119997 2710 - . gene_id 0 ; sequence GL50803_10708-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 117958 119997 . - . utg308_pilon exonerate:protein2genome:local exon 117958 119997 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 117958 119997 2710 - . alignment_id 0 ; Query GL50803_10708-t26_1-p1 ; Align 119998 1 2040 utg308_pilon exonerate:protein2genome:local gene 123695 124648 1636 - . gene_id 0 ; sequence GL50803_10711-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 123695 124648 . - . utg308_pilon exonerate:protein2genome:local exon 123695 124648 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 123695 124648 1636 - . alignment_id 0 ; Query GL50803_10711-t26_1-p1 ; Align 124649 1 954 utg308_pilon exonerate:protein2genome:local gene 124709 125995 1679 + . gene_id 0 ; sequence GL50803_10712-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 124709 125995 . + . utg308_pilon exonerate:protein2genome:local exon 124709 125995 . + . insertions 0 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 124709 125995 1679 + . alignment_id 0 ; Query GL50803_10712-t26_1-p1 ; Align 124709 1 942 ; Align 125651 318 345 utg308_pilon exonerate:protein2genome:local gene 970707 974068 4172 + . gene_id 0 ; sequence GL50803_10744-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 970707 974068 . + . utg308_pilon exonerate:protein2genome:local exon 970707 974068 . + . insertions 6 ; deletions 0 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 970707 974068 4172 + . alignment_id 0 ; Query GL50803_10744-t26_1-p1 ; Align 970707 1 894 ; Align 971607 299 2430 ; Align 974039 1109 30 utg11_pilon exonerate:protein2genome:local gene 599546 599899 552 + . gene_id 0 ; sequence GL50803_10755-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 599546 599899 . + . utg11_pilon exonerate:protein2genome:local exon 599546 599899 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 599546 599899 552 + . alignment_id 0 ; Query GL50803_10755-t26_1-p1 ; Align 599546 105 354 utg11_pilon exonerate:protein2genome:local gene 598162 599151 1510 + . gene_id 0 ; sequence GL50803_10756-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 598162 599151 . + . utg11_pilon exonerate:protein2genome:local exon 598162 599151 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 598162 599151 1510 + . alignment_id 0 ; Query GL50803_10756-t26_1-p1 ; Align 598162 1 990 utg11_pilon exonerate:protein2genome:local gene 595767 597104 1516 - . gene_id 0 ; sequence GL50803_10758-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 595767 597104 . - . utg11_pilon exonerate:protein2genome:local exon 595767 597104 . - . insertions 12 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 595767 597104 1516 - . alignment_id 0 ; Query GL50803_10758-t26_1-p1 ; Align 597105 1 699 ; Align 596394 234 627 utg18_pilon exonerate:protein2genome:local gene 403023 404063 1476 - . gene_id 0 ; sequence GL50803_1076-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 403023 404063 . - . utg18_pilon exonerate:protein2genome:local exon 403023 404063 . - . insertions 6 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 403023 404063 1476 - . alignment_id 0 ; Query GL50803_1076-t26_1-p1 ; Align 404064 1 753 ; Align 403305 252 282 utg11_pilon exonerate:protein2genome:local gene 595356 595748 557 - . gene_id 0 ; sequence GL50803_10760-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 595356 595748 . - . utg11_pilon exonerate:protein2genome:local exon 595356 595748 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 595356 595748 557 - . alignment_id 0 ; Query GL50803_10760-t26_1-p1 ; Align 595749 1 393 utg11_pilon exonerate:protein2genome:local gene 593186 594636 2025 + . gene_id 0 ; sequence GL50803_10762-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 593186 594636 . + . utg11_pilon exonerate:protein2genome:local exon 593186 594636 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 593186 594636 2025 + . alignment_id 0 ; Query GL50803_10762-t26_1-p1 ; Align 593186 1 1236 ; Align 594424 414 213 utg11_pilon exonerate:protein2genome:local gene 591995 593155 1311 - . gene_id 0 ; sequence GL50803_10764-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 591995 593155 . - . utg11_pilon exonerate:protein2genome:local exon 591995 593155 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 591995 593155 1311 - . alignment_id 0 ; Query GL50803_10764-t26_1-p1 ; Align 593156 1 333 ; Align 592823 113 681 ; Align 592142 341 147 utg11_pilon exonerate:protein2genome:local gene 588528 590639 3326 + . gene_id 0 ; sequence GL50803_10765-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 588528 590639 . + . utg11_pilon exonerate:protein2genome:local exon 588528 590639 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 588528 590639 3326 + . alignment_id 0 ; Query GL50803_10765-t26_1-p1 ; Align 588528 1 2112 utg11_pilon exonerate:protein2genome:local gene 587113 588468 1547 - . gene_id 0 ; sequence GL50803_10766-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 587113 588468 . - . utg11_pilon exonerate:protein2genome:local exon 587113 588468 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 587113 588468 1547 - . alignment_id 0 ; Query GL50803_10766-t26_1-p1 ; Align 588469 1 1356 utg11_pilon exonerate:protein2genome:local gene 584222 584410 142 - . gene_id 0 ; sequence GL50803_10769-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 584222 584410 . - . utg11_pilon exonerate:protein2genome:local exon 584222 584410 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 584222 584410 142 - . alignment_id 0 ; Query GL50803_10769-t26_1-p1 ; Align 584411 1 189 utg11_pilon exonerate:protein2genome:local gene 582618 584054 1492 - . gene_id 0 ; sequence GL50803_10773-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 582618 584054 . - . utg11_pilon exonerate:protein2genome:local exon 582618 584054 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 582618 584054 1492 - . alignment_id 0 ; Query GL50803_10773-t26_1-p1 ; Align 584055 1 1329 ; Align 582723 444 105 utg11_pilon exonerate:protein2genome:local gene 579873 581222 1837 + . gene_id 0 ; sequence GL50803_10775-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 579873 581222 . + . utg11_pilon exonerate:protein2genome:local exon 579873 581222 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 579873 581222 1837 + . alignment_id 0 ; Query GL50803_10775-t26_1-p1 ; Align 579873 1 1350 utg11_pilon exonerate:protein2genome:local gene 577217 579589 3634 - . gene_id 0 ; sequence GL50803_10778-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 577217 579589 . - . utg11_pilon exonerate:protein2genome:local exon 577217 579589 . - . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 577217 579589 3634 - . alignment_id 0 ; Query GL50803_10778-t26_1-p1 ; Align 579590 1 1326 ; Align 578264 447 1047 utg11_pilon exonerate:protein2genome:local gene 574196 574563 531 - . gene_id 0 ; sequence GL50803_10780-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 574196 574563 . - . utg11_pilon exonerate:protein2genome:local exon 574196 574563 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 574196 574563 531 - . alignment_id 0 ; Query GL50803_10780-t26_1-p1 ; Align 574564 2 36 ; Align 574526 15 330 utg11_pilon exonerate:protein2genome:local gene 572087 573259 1747 - . gene_id 0 ; sequence GL50803_10783-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 572087 573259 . - . utg11_pilon exonerate:protein2genome:local exon 572087 573259 . - . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 572087 573259 1747 - . alignment_id 0 ; Query GL50803_10783-t26_1-p1 ; Align 573260 1 750 ; Align 572510 252 111 ; Align 572399 292 312 utg349_pilon exonerate:protein2genome:local gene 557196 557684 686 - . gene_id 0 ; sequence GL50803_10791-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 557196 557684 . - . utg349_pilon exonerate:protein2genome:local exon 557196 557684 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 557196 557684 686 - . alignment_id 0 ; Query GL50803_10791-t26_1-p1 ; Align 557685 1 489 utg349_pilon exonerate:protein2genome:local gene 524711 527812 4186 - . gene_id 0 ; sequence GL50803_10801-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 524711 527812 . - . utg349_pilon exonerate:protein2genome:local exon 524711 527812 . - . insertions 6 ; deletions 15 utg349_pilon exonerate:protein2genome:local similarity 524711 527812 4186 - . alignment_id 0 ; Query GL50803_10801-t26_1-p1 ; Align 527813 20 633 ; Align 527174 231 942 ; Align 526232 547 24 ; Align 526208 556 15 ; Align 526193 562 30 ; Align 526163 574 780 ; Align 525383 838 45 ; Align 525338 858 627 utg349_pilon exonerate:protein2genome:local gene 521118 524648 4588 + . gene_id 0 ; sequence GL50803_10802-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 521118 524648 . + . utg349_pilon exonerate:protein2genome:local exon 521118 524648 . + . insertions 15 ; deletions 8 utg349_pilon exonerate:protein2genome:local similarity 521118 524648 4588 + . alignment_id 0 ; Query GL50803_10802-t26_1-p1 ; Align 521118 1 909 ; Align 522027 307 36 ; Align 522063 320 129 ; Align 522204 363 1065 ; Align 523269 721 162 ; Align 523434 775 930 ; Align 524364 1086 285 utg349_pilon exonerate:protein2genome:local gene 520239 521042 956 + . gene_id 0 ; sequence GL50803_10803-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 520239 521042 . + . utg349_pilon exonerate:protein2genome:local exon 520239 521042 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 520239 521042 956 + . alignment_id 0 ; Query GL50803_10803-t26_1-p1 ; Align 520239 1 804 utg349_pilon exonerate:protein2genome:local gene 519229 520128 1242 - . gene_id 0 ; sequence GL50803_10804-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 519229 520128 . - . utg349_pilon exonerate:protein2genome:local exon 519229 520128 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 519229 520128 1242 - . alignment_id 0 ; Query GL50803_10804-t26_1-p1 ; Align 520129 1 171 ; Align 519958 61 729 utg349_pilon exonerate:protein2genome:local gene 515836 517641 2420 - . gene_id 0 ; sequence GL50803_10807-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 515836 517641 . - . utg349_pilon exonerate:protein2genome:local exon 515836 517641 . - . insertions 0 ; deletions 8 utg349_pilon exonerate:protein2genome:local similarity 515836 517641 2420 - . alignment_id 0 ; Query GL50803_10807-t26_1-p1 ; Align 517642 1 117 ; Align 517525 41 24 ; Align 517501 52 63 ; Align 517438 75 15 ; Align 517423 81 114 ; Align 517309 120 1473 utg349_pilon exonerate:protein2genome:local gene 515017 515700 1223 + . gene_id 0 ; sequence GL50803_10808-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 515017 515700 . + . utg349_pilon exonerate:protein2genome:local exon 515017 515700 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 515017 515700 1223 + . alignment_id 0 ; Query GL50803_10808-t26_1-p1 ; Align 515017 1 684 utg349_pilon exonerate:protein2genome:local gene 514035 514874 1235 - . gene_id 0 ; sequence GL50803_10810-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 514035 514874 . - . utg349_pilon exonerate:protein2genome:local exon 514035 514874 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 514035 514874 1235 - . alignment_id 0 ; Query GL50803_10810-t26_1-p1 ; Align 514875 1 198 ; Align 514674 67 639 utg349_pilon exonerate:protein2genome:local gene 505395 512428 10055 - . gene_id 0 ; sequence GL50803_10813-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 505395 512428 . - . utg349_pilon exonerate:protein2genome:local exon 505395 512428 . - . insertions 3 ; deletions 2 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 505395 512428 10055 - . alignment_id 0 ; Query GL50803_10813-t26_1-p1 ; Align 512429 1 1452 ; Align 510974 485 501 ; Align 510472 652 4512 ; Align 505960 2157 525 ; Align 505434 2333 39 utg64_pilon exonerate:protein2genome:local gene 247861 249390 2039 - . gene_id 0 ; sequence GL50803_10821-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 247861 249390 . - . utg64_pilon exonerate:protein2genome:local exon 247861 249390 . - . insertions 0 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 247861 249390 2039 - . alignment_id 0 ; Query GL50803_10821-t26_1-p1 ; Align 249391 1 1221 ; Align 248170 411 309 utg64_pilon exonerate:protein2genome:local gene 246823 247848 1749 + . gene_id 0 ; sequence GL50803_10822-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 246823 247848 . + . utg64_pilon exonerate:protein2genome:local exon 246823 247848 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 246823 247848 1749 + . alignment_id 0 ; Query GL50803_10822-t26_1-p1 ; Align 246823 1 1026 utg64_pilon exonerate:protein2genome:local gene 240464 243745 4412 - . gene_id 0 ; sequence GL50803_10824-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 240464 243745 . - . utg64_pilon exonerate:protein2genome:local exon 240464 243745 . - . insertions 3 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 240464 243745 4412 - . alignment_id 0 ; Query GL50803_10824-t26_1-p1 ; Align 243746 1 255 ; Align 243491 89 1053 ; Align 242435 440 1971 utg64_pilon exonerate:protein2genome:local gene 238128 240461 2423 - . gene_id 0 ; sequence GL50803_10825-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 240143 240461 . - . utg64_pilon exonerate:protein2genome:local exon 240143 240461 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 240141 240142 . - . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 240071 240142 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 240071 240072 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 238379 240070 . - . utg64_pilon exonerate:protein2genome:local exon 238379 240070 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 238377 238378 . - . intron_id 2 ; splice_site "GA" utg64_pilon exonerate:protein2genome:local intron 238334 238378 . - . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 238334 238335 . - . intron_id 1 ; splice_site "AC" utg64_pilon exonerate:protein2genome:local cds 238128 238333 . - . utg64_pilon exonerate:protein2genome:local exon 238128 238333 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 238128 240461 2423 - . alignment_id 0 ; Query GL50803_10825-t26_1-p1 ; Align 240462 1 318 ; Align 240069 108 153 ; Align 239916 160 1536 ; Align 238332 673 204 utg64_pilon exonerate:protein2genome:local gene 235144 235932 1178 - . gene_id 0 ; sequence GL50803_10829-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 235144 235932 . - . utg64_pilon exonerate:protein2genome:local exon 235144 235932 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 235144 235932 1178 - . alignment_id 0 ; Query GL50803_10829-t26_1-p1 ; Align 235933 1 789 utg64_pilon exonerate:protein2genome:local gene 235213 235842 730 + . gene_id 0 ; sequence GL50803_10830-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 235213 235842 . + . utg64_pilon exonerate:protein2genome:local exon 235213 235842 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 235213 235842 730 + . alignment_id 0 ; Query GL50803_10830-t26_1-p1 ; Align 235213 3 630 utg64_pilon exonerate:protein2genome:local gene 232717 233535 914 + . gene_id 0 ; sequence GL50803_10832-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 232717 233535 . + . utg64_pilon exonerate:protein2genome:local exon 232717 233535 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 232717 233535 914 + . alignment_id 0 ; Query GL50803_10832-t26_1-p1 ; Align 232717 1 819 utg64_pilon exonerate:protein2genome:local gene 219196 219765 789 - . gene_id 0 ; sequence GL50803_10836-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 219196 219765 . - . utg64_pilon exonerate:protein2genome:local exon 219196 219765 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 219196 219765 789 - . alignment_id 0 ; Query GL50803_10836-t26_1-p1 ; Align 219766 1 570 utg64_pilon exonerate:protein2genome:local gene 449687 449971 385 - . gene_id 0 ; sequence GL50803_10840-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 449687 449971 . - . utg64_pilon exonerate:protein2genome:local exon 449687 449971 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 449687 449971 385 - . alignment_id 0 ; Query GL50803_10840-t26_1-p1 ; Align 449972 1 285 utg64_pilon exonerate:protein2genome:local gene 446960 448522 2453 + . gene_id 0 ; sequence GL50803_10843-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 446960 448522 . + . utg64_pilon exonerate:protein2genome:local exon 446960 448522 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 446960 448522 2453 + . alignment_id 0 ; Query GL50803_10843-t26_1-p1 ; Align 446960 1 1563 utg64_pilon exonerate:protein2genome:local gene 443564 444355 1128 - . gene_id 0 ; sequence GL50803_10846-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 443564 444355 . - . utg64_pilon exonerate:protein2genome:local exon 443564 444355 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 443564 444355 1128 - . alignment_id 0 ; Query GL50803_10846-t26_1-p1 ; Align 444356 4 792 utg64_pilon exonerate:protein2genome:local gene 437795 438178 550 - . gene_id 0 ; sequence GL50803_10850-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 437795 438178 . - . utg64_pilon exonerate:protein2genome:local exon 437795 438178 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 437795 438178 550 - . alignment_id 0 ; Query GL50803_10850-t26_1-p1 ; Align 438179 1 384 utg64_pilon exonerate:protein2genome:local gene 436673 437740 223 - . gene_id 0 ; sequence GL50803_10851-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 437598 437740 . - . utg64_pilon exonerate:protein2genome:local exon 437598 437740 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 437596 437597 . - . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 437444 437597 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 437444 437445 . - . intron_id 0 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local cds 437390 437443 . - . utg64_pilon exonerate:protein2genome:local exon 437390 437443 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 437388 437389 . - . intron_id 2 ; splice_site "TT" utg64_pilon exonerate:protein2genome:local intron 436785 437389 . - . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 436785 436786 . - . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 436673 436784 . - . utg64_pilon exonerate:protein2genome:local exon 436673 436784 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 436673 437740 223 - . alignment_id 0 ; Query GL50803_10851-t26_1-p1 ; Align 437741 5 132 ; Align 437609 50 9 ; Align 437443 54 51 ; Align 436784 72 72 ; Align 436709 96 36 utg64_pilon exonerate:protein2genome:local gene 413204 416245 4281 - . gene_id 0 ; sequence GL50803_10853-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 413204 416245 . - . utg64_pilon exonerate:protein2genome:local exon 413204 416245 . - . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 413204 416245 4281 - . alignment_id 0 ; Query GL50803_10853-t26_1-p1 ; Align 416246 1 1296 ; Align 414950 434 738 ; Align 414212 681 1008 utg64_pilon exonerate:protein2genome:local gene 411825 413174 1779 + . gene_id 0 ; sequence GL50803_10855-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 411825 413174 . + . utg64_pilon exonerate:protein2genome:local exon 411825 413174 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 411825 413174 1779 + . alignment_id 0 ; Query GL50803_10855-t26_1-p1 ; Align 411825 1 1350 utg64_pilon exonerate:protein2genome:local gene 410958 411845 1305 - . gene_id 0 ; sequence GL50803_10856-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 410958 411845 . - . utg64_pilon exonerate:protein2genome:local exon 410958 411845 . - . insertions 6 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 410958 411845 1305 - . alignment_id 0 ; Query GL50803_10856-t26_1-p1 ; Align 411846 1 21 ; Align 411819 8 861 utg64_pilon exonerate:protein2genome:local gene 410566 410943 496 + . gene_id 0 ; sequence GL50803_10857-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 410566 410943 . + . utg64_pilon exonerate:protein2genome:local exon 410566 410943 . + . insertions 0 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 410566 410943 496 + . alignment_id 0 ; Query GL50803_10857-t26_1-p1 ; Align 410566 1 309 ; Align 410875 106 9 ; Align 410884 110 60 utg64_pilon exonerate:protein2genome:local gene 409464 410546 1729 + . gene_id 0 ; sequence GL50803_10858-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 409464 410546 . + . utg64_pilon exonerate:protein2genome:local exon 409464 410546 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 409464 410546 1729 + . alignment_id 0 ; Query GL50803_10858-t26_1-p1 ; Align 409464 1 1083 utg64_pilon exonerate:protein2genome:local gene 409295 409408 158 - . gene_id 0 ; sequence GL50803_10859-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 409295 409408 . - . utg64_pilon exonerate:protein2genome:local exon 409295 409408 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 409295 409408 158 - . alignment_id 0 ; Query GL50803_10859-t26_1-p1 ; Align 409409 3 114 utg731_pilon exonerate:protein2genome:local gene 175190 175801 807 + . gene_id 0 ; sequence GL50803_10868-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 175190 175801 . + . utg731_pilon exonerate:protein2genome:local exon 175190 175801 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 175190 175801 807 + . alignment_id 0 ; Query GL50803_10868-t26_1-p1 ; Align 175190 1 612 utg731_pilon exonerate:protein2genome:local gene 178932 180596 2667 + . gene_id 0 ; sequence GL50803_10870-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 178932 180596 . + . utg731_pilon exonerate:protein2genome:local exon 178932 180596 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 178932 180596 2667 + . alignment_id 0 ; Query GL50803_10870-t26_1-p1 ; Align 178932 1 1665 utg731_pilon exonerate:protein2genome:local gene 180660 181595 1320 - . gene_id 0 ; sequence GL50803_10871-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 180660 181595 . - . utg731_pilon exonerate:protein2genome:local exon 180660 181595 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 180660 181595 1320 - . alignment_id 0 ; Query GL50803_10871-t26_1-p1 ; Align 181596 1 936 utg731_pilon exonerate:protein2genome:local gene 183870 186629 4368 + . gene_id 0 ; sequence GL50803_10875-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 183870 186629 . + . utg731_pilon exonerate:protein2genome:local exon 183870 186629 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 183870 186629 4368 + . alignment_id 0 ; Query GL50803_10875-t26_1-p1 ; Align 183870 8 2760 utg731_pilon exonerate:protein2genome:local gene 186698 187582 1377 - . gene_id 0 ; sequence GL50803_10876-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 186698 187582 . - . utg731_pilon exonerate:protein2genome:local exon 186698 187582 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 186698 187582 1377 - . alignment_id 0 ; Query GL50803_10876-t26_1-p1 ; Align 187583 1 183 ; Align 187400 63 702 utg731_pilon exonerate:protein2genome:local gene 188549 191044 3390 - . gene_id 0 ; sequence GL50803_10879-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 188968 191044 . - . utg731_pilon exonerate:protein2genome:local exon 188968 191044 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local splice5 188966 188967 . - . intron_id 1 ; splice_site "GC" utg731_pilon exonerate:protein2genome:local intron 188908 188967 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 188908 188909 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 188549 188907 . - . utg731_pilon exonerate:protein2genome:local exon 188549 188907 . - . insertions 0 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 188549 191044 3390 - . alignment_id 0 ; Query GL50803_10879-t26_1-p1 ; Align 191045 1 1470 ; Align 189575 493 606 ; Align 188906 696 51 ; Align 188855 715 39 ; Align 188816 731 267 utg731_pilon exonerate:protein2genome:local gene 191399 192655 1568 + . gene_id 0 ; sequence GL50803_10880-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 191399 192655 . + . utg731_pilon exonerate:protein2genome:local exon 191399 192655 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 191399 192655 1568 + . alignment_id 0 ; Query GL50803_10880-t26_1-p1 ; Align 191399 114 1257 utg731_pilon exonerate:protein2genome:local gene 192793 194331 2426 - . gene_id 0 ; sequence GL50803_10881-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 192793 194331 . - . utg731_pilon exonerate:protein2genome:local exon 192793 194331 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 192793 194331 2426 - . alignment_id 0 ; Query GL50803_10881-t26_1-p1 ; Align 194332 1 1539 utg731_pilon exonerate:protein2genome:local gene 194423 195325 1392 - . gene_id 0 ; sequence GL50803_10882-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 194423 195325 . - . utg731_pilon exonerate:protein2genome:local exon 194423 195325 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 194423 195325 1392 - . alignment_id 0 ; Query GL50803_10882-t26_1-p1 ; Align 195326 1 903 utg731_pilon exonerate:protein2genome:local gene 195412 196503 1592 - . gene_id 0 ; sequence GL50803_10883-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 195412 196503 . - . utg731_pilon exonerate:protein2genome:local exon 195412 196503 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 195412 196503 1592 - . alignment_id 0 ; Query GL50803_10883-t26_1-p1 ; Align 196504 1 1092 utg731_pilon exonerate:protein2genome:local gene 196590 201782 8461 - . gene_id 0 ; sequence GL50803_10885-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 196590 201782 . - . utg731_pilon exonerate:protein2genome:local exon 196590 201782 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 196590 201782 8461 - . alignment_id 0 ; Query GL50803_10885-t26_1-p1 ; Align 201783 1 5193 utg99_pilon exonerate:protein2genome:local gene 524709 525407 1186 + . gene_id 0 ; sequence GL50803_10889-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 524709 525407 . + . utg99_pilon exonerate:protein2genome:local exon 524709 525407 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 524709 525407 1186 + . alignment_id 0 ; Query GL50803_10889-t26_1-p1 ; Align 524709 1 699 utg99_pilon exonerate:protein2genome:local gene 524338 524676 548 + . gene_id 0 ; sequence GL50803_10890-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 524338 524676 . + . utg99_pilon exonerate:protein2genome:local exon 524338 524676 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 524338 524676 548 + . alignment_id 0 ; Query GL50803_10890-t26_1-p1 ; Align 524338 1 339 utg99_pilon exonerate:protein2genome:local gene 521408 523618 3273 - . gene_id 0 ; sequence GL50803_10892-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 521408 523618 . - . utg99_pilon exonerate:protein2genome:local exon 521408 523618 . - . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 521408 523618 3273 - . alignment_id 0 ; Query GL50803_10892-t26_1-p1 ; Align 523619 1 420 ; Align 523196 141 1788 utg99_pilon exonerate:protein2genome:local gene 520391 521353 1429 + . gene_id 0 ; sequence GL50803_10893-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 520391 521353 . + . utg99_pilon exonerate:protein2genome:local exon 520391 521353 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 520391 521353 1429 + . alignment_id 0 ; Query GL50803_10893-t26_1-p1 ; Align 520391 1 963 utg99_pilon exonerate:protein2genome:local gene 518468 519067 751 - . gene_id 0 ; sequence GL50803_10898-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 518468 519067 . - . utg99_pilon exonerate:protein2genome:local exon 518468 519067 . - . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 518468 519067 751 - . alignment_id 0 ; Query GL50803_10898-t26_1-p1 ; Align 519068 1 558 ; Align 518510 188 42 utg99_pilon exonerate:protein2genome:local gene 517297 517818 753 - . gene_id 0 ; sequence GL50803_10901-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 517297 517818 . - . utg99_pilon exonerate:protein2genome:local exon 517297 517818 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 517297 517818 753 - . alignment_id 0 ; Query GL50803_10901-t26_1-p1 ; Align 517819 1 522 utg99_pilon exonerate:protein2genome:local gene 504816 506933 2994 + . gene_id 0 ; sequence GL50803_10908-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 504816 506933 . + . utg99_pilon exonerate:protein2genome:local exon 504816 506933 . + . insertions 3 ; deletions 6 utg99_pilon exonerate:protein2genome:local similarity 504816 506933 2994 + . alignment_id 0 ; Query GL50803_10908-t26_1-p1 ; Align 504816 1 351 ; Align 505167 119 282 ; Align 505452 213 321 ; Align 505773 325 1161 utg99_pilon exonerate:protein2genome:local gene 501088 504245 4480 - . gene_id 0 ; sequence GL50803_10911-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 501088 504245 . - . utg99_pilon exonerate:protein2genome:local exon 501088 504245 . - . insertions 12 ; deletions 4 ; frameshifts 2 utg99_pilon exonerate:protein2genome:local similarity 501088 504245 4480 - . alignment_id 0 ; Query GL50803_10911-t26_1-p1 ; Align 504246 1 741 ; Align 503499 248 12 ; Align 503481 252 159 ; Align 503322 307 63 ; Align 503259 330 1626 ; Align 501632 872 108 ; Align 501523 908 435 utg99_pilon exonerate:protein2genome:local gene 500493 501080 488 + . gene_id 0 ; sequence GL50803_10912-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 500493 501080 . + . utg99_pilon exonerate:protein2genome:local exon 500493 501080 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 500493 501080 488 + . alignment_id 0 ; Query GL50803_10912-t26_1-p1 ; Align 500493 1 588 utg308_pilon exonerate:protein2genome:local gene 724837 725235 688 + . gene_id 0 ; sequence GL50803_10919-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 724837 725235 . + . utg308_pilon exonerate:protein2genome:local exon 724837 725235 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 724837 725235 688 + . alignment_id 0 ; Query GL50803_10919-t26_1-p1 ; Align 724837 1 399 utg308_pilon exonerate:protein2genome:local gene 728952 729944 1587 - . gene_id 0 ; sequence GL50803_10924-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 728952 729944 . - . utg308_pilon exonerate:protein2genome:local exon 728952 729944 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 728952 729944 1587 - . alignment_id 0 ; Query GL50803_10924-t26_1-p1 ; Align 729945 1 993 utg308_pilon exonerate:protein2genome:local gene 734907 735743 602 + . gene_id 0 ; sequence GL50803_10928-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 734907 735743 . + . utg308_pilon exonerate:protein2genome:local exon 734907 735743 . + . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 734907 735743 602 + . alignment_id 0 ; Query GL50803_10928-t26_1-p1 ; Align 734907 1 63 ; Align 734973 22 771 utg308_pilon exonerate:protein2genome:local gene 737070 739301 2511 + . gene_id 0 ; sequence GL50803_10932-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 737070 739301 . + . utg308_pilon exonerate:protein2genome:local exon 737070 739301 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 737070 739301 2511 + . alignment_id 0 ; Query GL50803_10932-t26_1-p1 ; Align 737070 4 1038 ; Align 738108 351 1194 utg308_pilon exonerate:protein2genome:local gene 741317 742468 1655 - . gene_id 0 ; sequence GL50803_10939-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 741317 742468 . - . utg308_pilon exonerate:protein2genome:local exon 741317 742468 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 741317 742468 1655 - . alignment_id 0 ; Query GL50803_10939-t26_1-p1 ; Align 742469 1 1152 utg308_pilon exonerate:protein2genome:local gene 744091 744258 107 + . gene_id 0 ; sequence GL50803_10941-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 744091 744258 . + . utg308_pilon exonerate:protein2genome:local exon 744091 744258 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 744091 744258 107 + . alignment_id 0 ; Query GL50803_10941-t26_1-p1 ; Align 744091 1 168 utg308_pilon exonerate:protein2genome:local gene 744919 745077 240 - . gene_id 0 ; sequence GL50803_10942-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 744919 745077 . - . utg308_pilon exonerate:protein2genome:local exon 744919 745077 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 744919 745077 240 - . alignment_id 0 ; Query GL50803_10942-t26_1-p1 ; Align 745078 1 159 utg308_pilon exonerate:protein2genome:local gene 742778 745309 3768 + . gene_id 0 ; sequence GL50803_10943-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 742778 745309 . + . utg308_pilon exonerate:protein2genome:local exon 742778 745309 . + . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 742778 745309 3768 + . alignment_id 0 ; Query GL50803_10943-t26_1-p1 ; Align 742778 1 603 ; Align 743384 202 1926 utg308_pilon exonerate:protein2genome:local gene 746282 747553 1642 + . gene_id 0 ; sequence GL50803_10946-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 746282 747553 . + . utg308_pilon exonerate:protein2genome:local exon 746282 747553 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 746282 747553 1642 + . alignment_id 0 ; Query GL50803_10946-t26_1-p1 ; Align 746282 1 1272 utg308_pilon exonerate:protein2genome:local gene 748858 750345 1557 + . gene_id 0 ; sequence GL50803_10950-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 748858 750345 . + . utg308_pilon exonerate:protein2genome:local exon 748858 750345 . + . insertions 9 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 748858 750345 1557 + . alignment_id 0 ; Query GL50803_10950-t26_1-p1 ; Align 748858 2 435 ; Align 749302 147 1044 utg349_pilon exonerate:protein2genome:local gene 363447 364455 1629 + . gene_id 0 ; sequence GL50803_10969-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 363447 364455 . + . utg349_pilon exonerate:protein2genome:local exon 363447 364455 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 363447 364455 1629 + . alignment_id 0 ; Query GL50803_10969-t26_1-p1 ; Align 363447 4 39 ; Align 363487 17 969 utg349_pilon exonerate:protein2genome:local gene 361582 363432 2225 + . gene_id 0 ; sequence GL50803_10971-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 361582 363432 . + . utg349_pilon exonerate:protein2genome:local exon 361582 363432 . + . insertions 0 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 361582 363432 2225 + . alignment_id 0 ; Query GL50803_10971-t26_1-p1 ; Align 361582 1 669 ; Align 362251 227 600 ; Align 362851 430 582 utg349_pilon exonerate:protein2genome:local gene 352273 356502 6643 - . gene_id 0 ; sequence GL50803_10976-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 352273 356502 . - . utg349_pilon exonerate:protein2genome:local exon 352273 356502 . - . insertions 3 ; deletions 11 utg349_pilon exonerate:protein2genome:local similarity 352273 356502 6643 - . alignment_id 0 ; Query GL50803_10976-t26_1-p1 ; Align 356503 1 1482 ; Align 355018 495 744 ; Align 354274 744 465 ; Align 353809 901 567 ; Align 353242 1093 717 ; Align 352525 1337 252 utg349_pilon exonerate:protein2genome:local gene 351650 352132 547 + . gene_id 0 ; sequence GL50803_10978-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 351650 352132 . + . utg349_pilon exonerate:protein2genome:local exon 351650 352132 . + . insertions 0 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 351650 352132 547 + . alignment_id 0 ; Query GL50803_10978-t26_1-p1 ; Align 351650 1 276 ; Align 351926 94 132 ; Align 352058 141 75 utg349_pilon exonerate:protein2genome:local gene 350648 351637 1467 + . gene_id 0 ; sequence GL50803_10979-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 350648 351637 . + . utg349_pilon exonerate:protein2genome:local exon 350648 351637 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 350648 351637 1467 + . alignment_id 0 ; Query GL50803_10979-t26_1-p1 ; Align 350648 1 990 utg731_pilon exonerate:protein2genome:local gene 808582 808881 242 + . gene_id 0 ; sequence GL50803_11029-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 808582 808881 . + . utg731_pilon exonerate:protein2genome:local exon 808582 808881 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 808582 808881 242 + . alignment_id 0 ; Query GL50803_11029-t26_1-p1 ; Align 808582 1 300 utg731_pilon exonerate:protein2genome:local gene 813238 813897 866 + . gene_id 0 ; sequence GL50803_11034-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 813238 813897 . + . utg731_pilon exonerate:protein2genome:local exon 813238 813897 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 813238 813897 866 + . alignment_id 0 ; Query GL50803_11034-t26_1-p1 ; Align 813238 2 660 utg731_pilon exonerate:protein2genome:local gene 826560 829168 3544 + . gene_id 0 ; sequence GL50803_11039-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 826560 829168 . + . utg731_pilon exonerate:protein2genome:local exon 826560 829168 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 826560 829168 3544 + . alignment_id 0 ; Query GL50803_11039-t26_1-p1 ; Align 826560 1 105 ; Align 826666 36 171 ; Align 826838 93 1218 ; Align 828056 500 1113 utg731_pilon exonerate:protein2genome:local gene 829533 830447 968 + . gene_id 0 ; sequence GL50803_11040-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 829533 830447 . + . utg731_pilon exonerate:protein2genome:local exon 829533 830447 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 829533 830447 968 + . alignment_id 0 ; Query GL50803_11040-t26_1-p1 ; Align 829533 1 654 ; Align 830187 220 261 utg731_pilon exonerate:protein2genome:local gene 833897 834865 1620 - . gene_id 0 ; sequence GL50803_11043-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 833897 834865 . - . utg731_pilon exonerate:protein2genome:local exon 833897 834865 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 833897 834865 1620 - . alignment_id 0 ; Query GL50803_11043-t26_1-p1 ; Align 834866 1 969 utg731_pilon exonerate:protein2genome:local gene 834935 835567 1088 - . gene_id 0 ; sequence GL50803_11044-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 834935 835567 . - . utg731_pilon exonerate:protein2genome:local exon 834935 835567 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 834935 835567 1088 - . alignment_id 0 ; Query GL50803_11044-t26_1-p1 ; Align 835568 1 633 utg731_pilon exonerate:protein2genome:local gene 1227320 1227595 345 + . gene_id 0 ; sequence GL50803_11050-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1227320 1227595 . + . utg731_pilon exonerate:protein2genome:local exon 1227320 1227595 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1227320 1227595 345 + . alignment_id 0 ; Query GL50803_11050-t26_1-p1 ; Align 1227320 29 276 utg731_pilon exonerate:protein2genome:local gene 1232889 1233719 1336 - . gene_id 0 ; sequence GL50803_11052-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1232889 1233719 . - . utg731_pilon exonerate:protein2genome:local exon 1232889 1233719 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1232889 1233719 1336 - . alignment_id 0 ; Query GL50803_11052-t26_1-p1 ; Align 1233720 1 567 ; Align 1233153 191 264 utg731_pilon exonerate:protein2genome:local gene 1233851 1235197 2042 + . gene_id 0 ; sequence GL50803_11054-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1233851 1235197 . + . utg731_pilon exonerate:protein2genome:local exon 1233851 1235197 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1233851 1235197 2042 + . alignment_id 0 ; Query GL50803_11054-t26_1-p1 ; Align 1233851 1 1347 utg731_pilon exonerate:protein2genome:local gene 1235224 1235838 869 - . gene_id 0 ; sequence GL50803_11055-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1235224 1235838 . - . utg731_pilon exonerate:protein2genome:local exon 1235224 1235838 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1235224 1235838 869 - . alignment_id 0 ; Query GL50803_11055-t26_1-p1 ; Align 1235839 1 615 utg47_pilon exonerate:protein2genome:local gene 1238026 1238991 1216 - . gene_id 0 ; sequence GL50803_11099-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1238026 1238991 . - . utg47_pilon exonerate:protein2genome:local exon 1238026 1238991 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1238026 1238991 1216 - . alignment_id 0 ; Query GL50803_11099-t26_1-p1 ; Align 1238992 566 222 ; Align 1238767 640 741 utg47_pilon exonerate:protein2genome:local gene 1240675 1244847 5795 + . gene_id 0 ; sequence GL50803_11100-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1240675 1244847 . + . utg47_pilon exonerate:protein2genome:local exon 1240675 1244847 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1240675 1244847 5795 + . alignment_id 0 ; Query GL50803_11100-t26_1-p1 ; Align 1240675 1 2751 ; Align 1243426 920 1422 utg47_pilon exonerate:protein2genome:local gene 1249855 1251658 2304 + . gene_id 0 ; sequence GL50803_11105-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1249855 1250762 . + . utg47_pilon exonerate:protein2genome:local exon 1249855 1250762 . + . insertions 3 ; deletions 1 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local splice5 1250763 1250764 . + . intron_id 1 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 1250763 1250798 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1250797 1250798 . + . intron_id 0 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 1250799 1251658 . + . utg47_pilon exonerate:protein2genome:local exon 1250799 1251658 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1249855 1251658 2304 + . alignment_id 0 ; Query GL50803_11105-t26_1-p1 ; Align 1249855 1 291 ; Align 1250146 99 357 ; Align 1250507 218 36 ; Align 1250546 230 216 ; Align 1250801 303 858 utg47_pilon exonerate:protein2genome:local gene 1254529 1256976 2729 - . gene_id 0 ; sequence GL50803_11107-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1254529 1256976 . - . utg47_pilon exonerate:protein2genome:local exon 1254529 1256976 . - . insertions 6 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 1254529 1256976 2729 - . alignment_id 0 ; Query GL50803_11107-t26_1-p1 ; Align 1256977 1 1569 ; Align 1255408 527 51 ; Align 1255357 546 462 ; Align 1254889 700 360 utg47_pilon exonerate:protein2genome:local gene 1259576 1260031 729 - . gene_id 0 ; sequence GL50803_11110-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1259576 1260031 . - . utg47_pilon exonerate:protein2genome:local exon 1259576 1260031 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1259576 1260031 729 - . alignment_id 0 ; Query GL50803_11110-t26_1-p1 ; Align 1260032 1 456 utg47_pilon exonerate:protein2genome:local gene 1261764 1262177 471 - . gene_id 0 ; sequence GL50803_11113-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1261764 1262177 . - . utg47_pilon exonerate:protein2genome:local exon 1261764 1262177 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1261764 1262177 471 - . alignment_id 0 ; Query GL50803_11113-t26_1-p1 ; Align 1262178 1 414 utg47_pilon exonerate:protein2genome:local gene 1262180 1262737 873 - . gene_id 0 ; sequence GL50803_11114-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1262180 1262737 . - . utg47_pilon exonerate:protein2genome:local exon 1262180 1262737 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1262180 1262737 873 - . alignment_id 0 ; Query GL50803_11114-t26_1-p1 ; Align 1262738 1 558 utg47_pilon exonerate:protein2genome:local gene 1264063 1265265 1248 + . gene_id 0 ; sequence GL50803_11116-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1264063 1265265 . + . utg47_pilon exonerate:protein2genome:local exon 1264063 1265265 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1264063 1265265 1248 + . alignment_id 0 ; Query GL50803_11116-t26_1-p1 ; Align 1264063 1 1203 utg47_pilon exonerate:protein2genome:local gene 1265372 1266706 2214 + . gene_id 0 ; sequence GL50803_11118-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1265372 1266706 . + . utg47_pilon exonerate:protein2genome:local exon 1265372 1266706 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1265372 1266706 2214 + . alignment_id 0 ; Query GL50803_11118-t26_1-p1 ; Align 1265372 1 1335 utg47_pilon exonerate:protein2genome:local gene 1266930 1267064 192 - . gene_id 0 ; sequence GL50803_11119-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1266930 1267064 . - . utg47_pilon exonerate:protein2genome:local exon 1266930 1267064 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1266930 1267064 192 - . alignment_id 0 ; Query GL50803_11119-t26_1-p1 ; Align 1267065 1 135 utg47_pilon exonerate:protein2genome:local gene 1266799 1267758 1542 + . gene_id 0 ; sequence GL50803_11120-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1266799 1267758 . + . utg47_pilon exonerate:protein2genome:local exon 1266799 1267758 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1266799 1267758 1542 + . alignment_id 0 ; Query GL50803_11120-t26_1-p1 ; Align 1266799 1 960 utg308_pilon exonerate:protein2genome:local gene 874165 875517 1857 + . gene_id 0 ; sequence GL50803_11125-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 874165 875517 . + . utg308_pilon exonerate:protein2genome:local exon 874165 875517 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 874165 875517 1857 + . alignment_id 0 ; Query GL50803_11125-t26_1-p1 ; Align 874165 10 1353 utg308_pilon exonerate:protein2genome:local gene 867374 868309 1313 + . gene_id 0 ; sequence GL50803_11129-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 867374 868309 . + . utg308_pilon exonerate:protein2genome:local exon 867374 868309 . + . insertions 0 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 867374 868309 1313 + . alignment_id 0 ; Query GL50803_11129-t26_1-p1 ; Align 867374 1 681 ; Align 868055 231 255 utg308_pilon exonerate:protein2genome:local gene 865473 867095 2093 - . gene_id 0 ; sequence GL50803_11131-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 865473 867095 . - . utg308_pilon exonerate:protein2genome:local exon 865473 867095 . - . insertions 15 ; deletions 10 utg308_pilon exonerate:protein2genome:local similarity 865473 867095 2093 - . alignment_id 0 ; Query GL50803_11131-t26_1-p1 ; Align 867096 1 369 ; Align 866727 129 897 ; Align 865815 428 99 ; Align 865716 463 39 ; Align 865677 479 204 utg308_pilon exonerate:protein2genome:local gene 854160 855047 1284 + . gene_id 0 ; sequence GL50803_11139-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 854160 855047 . + . utg308_pilon exonerate:protein2genome:local exon 854160 855047 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 854160 855047 1284 + . alignment_id 0 ; Query GL50803_11139-t26_1-p1 ; Align 854160 1 888 utg308_pilon exonerate:protein2genome:local gene 851220 925478 120 + . gene_id 0 ; sequence GL50803_11143-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 851220 851366 . + . utg308_pilon exonerate:protein2genome:local exon 851220 851366 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 851367 851368 . + . intron_id 1 ; splice_site "TT" utg308_pilon exonerate:protein2genome:local intron 851367 925427 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 925426 925427 . + . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 925428 925478 . + . utg308_pilon exonerate:protein2genome:local exon 925428 925478 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 851220 925478 120 + . alignment_id 0 ; Query GL50803_11143-t26_1-p1 ; Align 851220 7 147 ; Align 925428 56 51 utg308_pilon exonerate:protein2genome:local gene 848529 849269 845 - . gene_id 0 ; sequence GL50803_11149-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 848529 849269 . - . utg308_pilon exonerate:protein2genome:local exon 848529 849269 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 848529 849269 845 - . alignment_id 0 ; Query GL50803_11149-t26_1-p1 ; Align 849270 1 741 utg308_pilon exonerate:protein2genome:local gene 847495 848181 935 - . gene_id 0 ; sequence GL50803_11151-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 847495 848181 . - . utg308_pilon exonerate:protein2genome:local exon 847495 848181 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 847495 848181 935 - . alignment_id 0 ; Query GL50803_11151-t26_1-p1 ; Align 848182 1 687 utg308_pilon exonerate:protein2genome:local gene 845637 847364 2149 - . gene_id 0 ; sequence GL50803_11152-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 845637 847364 . - . utg308_pilon exonerate:protein2genome:local exon 845637 847364 . - . insertions 12 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 845637 847364 2149 - . alignment_id 0 ; Query GL50803_11152-t26_1-p1 ; Align 847365 1 1470 ; Align 845883 491 246 utg308_pilon exonerate:protein2genome:local gene 845430 845627 292 - . gene_id 0 ; sequence GL50803_11153-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 845430 845627 . - . utg308_pilon exonerate:protein2genome:local exon 845430 845627 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 845430 845627 292 - . alignment_id 0 ; Query GL50803_11153-t26_1-p1 ; Align 845628 1 198 utg308_pilon exonerate:protein2genome:local gene 298211 298327 121 + . gene_id 0 ; sequence GL50803_11156-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 298211 298327 . + . utg308_pilon exonerate:protein2genome:local exon 298211 298327 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 298211 298327 121 + . alignment_id 0 ; Query GL50803_11156-t26_1-p1 ; Align 298211 1 117 utg99_pilon exonerate:protein2genome:local gene 475888 478035 3203 + . gene_id 0 ; sequence GL50803_11164-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 475888 478035 . + . utg99_pilon exonerate:protein2genome:local exon 475888 478035 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 475888 478035 3203 + . alignment_id 0 ; Query GL50803_11164-t26_1-p1 ; Align 475888 1 2148 utg99_pilon exonerate:protein2genome:local gene 473609 475828 3382 + . gene_id 0 ; sequence GL50803_11165-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 473609 475828 . + . utg99_pilon exonerate:protein2genome:local exon 473609 475828 . + . insertions 0 ; deletions 8 utg99_pilon exonerate:protein2genome:local similarity 473609 475828 3382 + . alignment_id 0 ; Query GL50803_11165-t26_1-p1 ; Align 473609 1 1545 ; Align 475154 520 48 ; Align 475202 540 627 utg99_pilon exonerate:protein2genome:local gene 456091 468092 123 + . gene_id 0 ; sequence GL50803_11169-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 456091 456112 . + . utg99_pilon exonerate:protein2genome:local exon 456091 456112 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 456113 456114 . + . intron_id 1 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 456113 468012 . + . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 468011 468012 . + . intron_id 0 ; splice_site "TG" utg99_pilon exonerate:protein2genome:local cds 468013 468092 . + . utg99_pilon exonerate:protein2genome:local exon 468013 468092 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 456091 468092 123 + . alignment_id 0 ; Query GL50803_11169-t26_1-p1 ; Align 456091 16 21 ; Align 468015 24 78 utg99_pilon exonerate:protein2genome:local gene 466838 468091 1809 - . gene_id 0 ; sequence GL50803_11170-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 466838 468091 . - . utg99_pilon exonerate:protein2genome:local exon 466838 468091 . - . insertions 6 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 466838 468091 1809 - . alignment_id 0 ; Query GL50803_11170-t26_1-p1 ; Align 468092 127 114 ; Align 467972 165 999 ; Align 466973 499 135 utg349_pilon exonerate:protein2genome:local gene 1038868 1435690 1917 + . gene_id 0 ; sequence GL50803_111732-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1038868 1039025 . + . utg349_pilon exonerate:protein2genome:local exon 1038868 1039025 . + . insertions 3 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1039026 1039027 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1039026 1100967 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1100966 1100967 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1100968 1101795 . + . utg349_pilon exonerate:protein2genome:local exon 1100968 1101795 . + . insertions 33 ; deletions 4 utg349_pilon exonerate:protein2genome:local splice5 1101796 1101797 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1101796 1101825 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1101824 1101825 . + . intron_id 1 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local cds 1101826 1102146 . + . utg349_pilon exonerate:protein2genome:local exon 1101826 1102146 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1102147 1102148 . + . intron_id 3 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 1102147 1239257 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 1239256 1239257 . + . intron_id 2 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 1239258 1239946 . + . utg349_pilon exonerate:protein2genome:local exon 1239258 1239946 . + . insertions 0 ; deletions 6 utg349_pilon exonerate:protein2genome:local splice5 1239947 1239948 . + . intron_id 4 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1239947 1435565 . + . intron_id 4 utg349_pilon exonerate:protein2genome:local splice3 1435564 1435565 . + . intron_id 3 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 1435566 1435690 . + . utg349_pilon exonerate:protein2genome:local exon 1435566 1435690 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1038868 1435690 1917 + . alignment_id 0 ; Query GL50803_111732-t26_1-p1 ; Align 1038868 1 51 ; Align 1038919 19 99 ; Align 1039021 52 3 ; Align 1100969 54 99 ; Align 1101071 87 42 ; Align 1101119 101 69 ; Align 1101194 124 159 ; Align 1101356 177 66 ; Align 1101422 201 42 ; Align 1101470 215 87 ; Align 1101563 244 75 ; Align 1101641 269 90 ; Align 1101731 300 15 ; Align 1101746 306 48 ; Align 1101827 323 42 ; Align 1101869 338 276 ; Align 1239259 431 264 ; Align 1239523 521 84 ; Align 1239607 553 339 ; Align 1435568 667 6 ; Align 1435574 670 117 utg99_pilon exonerate:protein2genome:local gene 464666 465658 1085 - . gene_id 0 ; sequence GL50803_11174-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 464666 465658 . - . utg99_pilon exonerate:protein2genome:local exon 464666 465658 . - . insertions 0 ; deletions 4 utg99_pilon exonerate:protein2genome:local similarity 464666 465658 1085 - . alignment_id 0 ; Query GL50803_11174-t26_1-p1 ; Align 465659 1 414 ; Align 465245 142 381 ; Align 464864 270 198 utg99_pilon exonerate:protein2genome:local gene 457984 459720 2701 + . gene_id 0 ; sequence GL50803_11177-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 457984 459720 . + . utg99_pilon exonerate:protein2genome:local exon 457984 459720 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 457984 459720 2701 + . alignment_id 0 ; Query GL50803_11177-t26_1-p1 ; Align 457984 6 1737 utg99_pilon exonerate:protein2genome:local gene 456914 457918 1630 + . gene_id 0 ; sequence GL50803_11178-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 456914 457918 . + . utg99_pilon exonerate:protein2genome:local exon 456914 457918 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 456914 457918 1630 + . alignment_id 0 ; Query GL50803_11178-t26_1-p1 ; Align 456914 1 1005 utg349_pilon exonerate:protein2genome:local gene 1465395 1466810 1914 - . gene_id 0 ; sequence GL50803_111806-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1465395 1466810 . - . utg349_pilon exonerate:protein2genome:local exon 1465395 1466810 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1465395 1466810 1914 - . alignment_id 0 ; Query GL50803_111806-t26_1-p1 ; Align 1466811 1 372 ; Align 1466439 126 1044 utg47_pilon exonerate:protein2genome:local gene 2248966 2249477 385 + . gene_id 0 ; sequence GL50803_111809-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2248966 2249477 . + . utg47_pilon exonerate:protein2genome:local exon 2248966 2249477 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 2248966 2249477 385 + . alignment_id 0 ; Query GL50803_111809-t26_1-p1 ; Align 2248966 2 378 ; Align 2249346 128 18 ; Align 2249364 135 9 ; Align 2249373 139 105 utg47_pilon exonerate:protein2genome:local gene 2083488 2083670 181 - . gene_id 0 ; sequence GL50803_111854-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2083488 2083670 . - . utg47_pilon exonerate:protein2genome:local exon 2083488 2083670 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2083488 2083670 181 - . alignment_id 0 ; Query GL50803_111854-t26_1-p1 ; Align 2083671 1 183 utg265_pilon exonerate:protein2genome:local gene 1000445 1001263 1381 - . gene_id 0 ; sequence GL50803_11186-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1000445 1001263 . - . utg265_pilon exonerate:protein2genome:local exon 1000445 1001263 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1000445 1001263 1381 - . alignment_id 0 ; Query GL50803_11186-t26_1-p1 ; Align 1001264 1 819 utg47_pilon exonerate:protein2genome:local gene 2029531 2033052 4177 + . gene_id 0 ; sequence GL50803_111869-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2029531 2033052 . + . utg47_pilon exonerate:protein2genome:local exon 2029531 2033052 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2029531 2033052 4177 + . alignment_id 0 ; Query GL50803_111869-t26_1-p1 ; Align 2029531 1 3522 utg18_pilon exonerate:protein2genome:local gene 456061 457713 1751 + . gene_id 0 ; sequence GL50803_111871-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 456061 457713 . + . utg18_pilon exonerate:protein2genome:local exon 456061 457713 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 456061 457713 1751 + . alignment_id 0 ; Query GL50803_111871-t26_1-p1 ; Align 456061 1 1653 utg11_pilon exonerate:protein2genome:local gene 21511 88574 842 - . gene_id 0 ; sequence GL50803_111873-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 87949 88574 . - . utg11_pilon exonerate:protein2genome:local exon 87949 88574 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local splice5 87947 87948 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 21651 87948 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 21651 21652 . - . intron_id 0 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local cds 21511 21650 . - . utg11_pilon exonerate:protein2genome:local exon 21511 21650 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 21511 88574 842 - . alignment_id 0 ; Query GL50803_111873-t26_1-p1 ; Align 88575 1 36 ; Align 88538 13 246 ; Align 88292 96 342 ; Align 21649 211 138 utg212_pilon exonerate:protein2genome:local gene 13830 115880 842 + . gene_id 0 ; sequence GL50803_111873-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 13830 14426 . + . utg212_pilon exonerate:protein2genome:local exon 13830 14426 . + . insertions 0 ; deletions 3 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local splice5 14427 14428 . + . intron_id 1 ; splice_site "AC" utg212_pilon exonerate:protein2genome:local intron 14427 115722 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115721 115722 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115723 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115723 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 13830 115880 842 + . alignment_id 0 ; Query GL50803_111873-t26_1-p1 ; Align 13830 3 30 ; Align 13861 13 42 ; Align 13904 27 78 ; Align 13982 55 111 ; Align 14093 93 333 ; Align 115725 205 156 utg18_pilon exonerate:protein2genome:local gene 86150 325960 951 - . gene_id 0 ; sequence GL50803_111874-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 325600 325960 . - . utg18_pilon exonerate:protein2genome:local exon 325600 325960 . - . insertions 3 ; deletions 1 utg18_pilon exonerate:protein2genome:local splice5 325598 325599 . - . intron_id 1 ; splice_site "GG" utg18_pilon exonerate:protein2genome:local intron 178181 325599 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 178181 178182 . - . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 177851 178180 . - . utg18_pilon exonerate:protein2genome:local exon 177851 178180 . - . insertions 3 ; deletions 1 utg18_pilon exonerate:protein2genome:local splice5 177849 177850 . - . intron_id 2 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 86542 177850 . - . intron_id 2 utg18_pilon exonerate:protein2genome:local splice3 86542 86543 . - . intron_id 1 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 86150 86541 . - . utg18_pilon exonerate:protein2genome:local exon 86150 86541 . - . insertions 15 ; deletions 6 utg18_pilon exonerate:protein2genome:local similarity 86150 325960 951 - . alignment_id 0 ; Query GL50803_111874-t26_1-p1 ; Align 325961 21 129 ; Align 325829 64 93 ; Align 325736 96 135 ; Align 178179 142 12 ; Align 178167 147 264 ; Align 177900 235 48 ; Align 86540 252 36 ; Align 86504 265 45 ; Align 86456 280 66 ; Align 86390 303 36 ; Align 86354 316 39 ; Align 86312 329 45 ; Align 86267 346 27 ; Align 86231 355 39 ; Align 86192 369 42 utg308_pilon exonerate:protein2genome:local gene 703756 710823 8820 - . gene_id 0 ; sequence GL50803_111886-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 703756 710823 . - . utg308_pilon exonerate:protein2genome:local exon 703756 710823 . - . insertions 9 ; deletions 10 utg308_pilon exonerate:protein2genome:local similarity 703756 710823 8820 - . alignment_id 0 ; Query GL50803_111886-t26_1-p1 ; Align 710824 1 345 ; Align 710479 117 1512 ; Align 708967 622 276 ; Align 708685 714 195 ; Align 708490 781 1191 ; Align 707299 1182 2613 ; Align 704683 2053 63 ; Align 704620 2076 864 utg265_pilon exonerate:protein2genome:local gene 1009256 1010857 1960 - . gene_id 0 ; sequence GL50803_11190-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1009256 1010857 . - . utg265_pilon exonerate:protein2genome:local exon 1009256 1010857 . - . insertions 3 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 1009256 1010857 1960 - . alignment_id 0 ; Query GL50803_11190-t26_1-p1 ; Align 1010858 1 801 ; Align 1010054 268 369 ; Align 1009685 394 66 ; Align 1009619 417 363 utg349_pilon exonerate:protein2genome:local gene 1103724 1224558 452 + . gene_id 0 ; sequence GL50803_111903-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1103724 1103938 . + . utg349_pilon exonerate:protein2genome:local exon 1103724 1103938 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1103939 1103940 . + . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 1103939 1224398 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1224397 1224398 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1224399 1224558 . + . utg349_pilon exonerate:protein2genome:local exon 1224399 1224558 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1103724 1224558 452 + . alignment_id 0 ; Query GL50803_111903-t26_1-p1 ; Align 1103724 2 18 ; Align 1103742 9 195 ; Align 1224400 75 159 utg11_pilon exonerate:protein2genome:local gene 1163603 1166242 3375 - . gene_id 0 ; sequence GL50803_111906-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1163603 1166242 . - . utg11_pilon exonerate:protein2genome:local exon 1163603 1166242 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1163603 1166242 3375 - . alignment_id 0 ; Query GL50803_111906-t26_1-p1 ; Align 1166243 1 2640 utg265_pilon exonerate:protein2genome:local gene 1011471 1012358 933 - . gene_id 0 ; sequence GL50803_11191-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1011471 1012358 . - . utg265_pilon exonerate:protein2genome:local exon 1011471 1012358 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 1011471 1012358 933 - . alignment_id 0 ; Query GL50803_11191-t26_1-p1 ; Align 1012359 1 411 ; Align 1011948 139 477 utg308_pilon exonerate:protein2genome:local gene 299002 300294 1269 + . gene_id 0 ; sequence GL50803_111911-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 299002 300294 . + . utg308_pilon exonerate:protein2genome:local exon 299002 300294 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 299002 300294 1269 + . alignment_id 0 ; Query GL50803_111911-t26_1-p1 ; Align 299002 4 1293 utg308_pilon exonerate:protein2genome:local gene 874216 874395 167 - . gene_id 0 ; sequence GL50803_111923-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 874216 874395 . - . utg308_pilon exonerate:protein2genome:local exon 874216 874395 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 874216 874395 167 - . alignment_id 0 ; Query GL50803_111923-t26_1-p1 ; Align 874396 2 180 utg308_pilon exonerate:protein2genome:local gene 882462 882617 104 + . gene_id 0 ; sequence GL50803_111927-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 882462 882617 . + . utg308_pilon exonerate:protein2genome:local exon 882462 882617 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 882462 882617 104 + . alignment_id 0 ; Query GL50803_111927-t26_1-p1 ; Align 882462 7 156 utg64_pilon exonerate:protein2genome:local gene 766741 1061880 1943 - . gene_id 0 ; sequence GL50803_111933-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 1061803 1061880 . - . utg64_pilon exonerate:protein2genome:local exon 1061803 1061880 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 1061801 1061802 . - . intron_id 1 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 1026674 1061802 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 1026674 1026675 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 1026190 1026673 . - . utg64_pilon exonerate:protein2genome:local exon 1026190 1026673 . - . insertions 21 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 1026188 1026189 . - . intron_id 2 ; splice_site "CT" utg64_pilon exonerate:protein2genome:local intron 846791 1026189 . - . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 846791 846792 . - . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 846414 846790 . - . utg64_pilon exonerate:protein2genome:local exon 846414 846790 . - . insertions 12 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 846412 846413 . - . intron_id 3 ; splice_site "AC" utg64_pilon exonerate:protein2genome:local intron 833459 846413 . - . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 833459 833460 . - . intron_id 2 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 832318 833458 . - . utg64_pilon exonerate:protein2genome:local exon 832318 833458 . - . insertions 3 ; deletions 6 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local splice5 832316 832317 . - . intron_id 4 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 766882 832317 . - . intron_id 4 utg64_pilon exonerate:protein2genome:local splice3 766882 766883 . - . intron_id 3 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 766741 766881 . - . utg64_pilon exonerate:protein2genome:local exon 766741 766881 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 766741 1061880 1943 - . alignment_id 0 ; Query GL50803_111933-t26_1-p1 ; Align 1061881 7 78 ; Align 1026674 33 27 ; Align 1026647 43 213 ; Align 1026431 114 15 ; Align 1026413 119 9 ; Align 1026398 122 93 ; Align 1026296 153 105 ; Align 846789 189 105 ; Align 846681 224 42 ; Align 846636 238 36 ; Align 846597 250 162 ; Align 846432 304 18 ; Align 833459 310 72 ; Align 833384 334 171 ; Align 833212 391 156 ; Align 833056 445 537 ; Align 832519 626 51 ; Align 832468 644 66 ; Align 832402 667 84 ; Align 766882 695 141 utg731_pilon exonerate:protein2genome:local gene 70271 70708 565 + . gene_id 0 ; sequence GL50803_111935-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 70271 70708 . + . utg731_pilon exonerate:protein2genome:local exon 70271 70708 . + . insertions 6 ; deletions 0 ; frameshifts 6 utg731_pilon exonerate:protein2genome:local similarity 70271 70708 565 + . alignment_id 0 ; Query GL50803_111935-t26_1-p1 ; Align 70271 22 258 ; Align 70530 108 39 ; Align 70575 121 3 ; Align 70583 122 126 utg64_pilon exonerate:protein2genome:local gene 766741 1061880 1938 - . gene_id 0 ; sequence GL50803_111936-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 1061803 1061880 . - . utg64_pilon exonerate:protein2genome:local exon 1061803 1061880 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 1061801 1061802 . - . intron_id 1 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 1026674 1061802 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 1026674 1026675 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 1026190 1026673 . - . utg64_pilon exonerate:protein2genome:local exon 1026190 1026673 . - . insertions 21 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 1026188 1026189 . - . intron_id 2 ; splice_site "CT" utg64_pilon exonerate:protein2genome:local intron 846791 1026189 . - . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 846791 846792 . - . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 846414 846790 . - . utg64_pilon exonerate:protein2genome:local exon 846414 846790 . - . insertions 12 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 846412 846413 . - . intron_id 3 ; splice_site "AC" utg64_pilon exonerate:protein2genome:local intron 833459 846413 . - . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 833459 833460 . - . intron_id 2 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 832318 833458 . - . utg64_pilon exonerate:protein2genome:local exon 832318 833458 . - . insertions 3 ; deletions 6 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local splice5 832316 832317 . - . intron_id 4 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 766882 832317 . - . intron_id 4 utg64_pilon exonerate:protein2genome:local splice3 766882 766883 . - . intron_id 3 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 766741 766881 . - . utg64_pilon exonerate:protein2genome:local exon 766741 766881 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 766741 1061880 1938 - . alignment_id 0 ; Query GL50803_111936-t26_1-p1 ; Align 1061881 7 78 ; Align 1026674 33 27 ; Align 1026647 43 213 ; Align 1026431 114 15 ; Align 1026413 119 9 ; Align 1026398 122 93 ; Align 1026296 153 105 ; Align 846789 189 105 ; Align 846681 224 42 ; Align 846636 238 36 ; Align 846597 250 162 ; Align 846432 304 18 ; Align 833459 310 72 ; Align 833384 334 171 ; Align 833212 391 156 ; Align 833056 445 537 ; Align 832519 626 51 ; Align 832468 644 66 ; Align 832402 667 84 ; Align 766882 695 141 utg265_pilon exonerate:protein2genome:local gene 871562 872602 1117 - . gene_id 0 ; sequence GL50803_111938-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 871562 872602 . - . utg265_pilon exonerate:protein2genome:local exon 871562 872602 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 871562 872602 1117 - . alignment_id 0 ; Query GL50803_111938-t26_1-p1 ; Align 872603 11 1041 utg265_pilon exonerate:protein2genome:local gene 936349 951706 24217 + . gene_id 0 ; sequence GL50803_111950-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 936349 951706 . + . utg265_pilon exonerate:protein2genome:local exon 936349 951706 . + . insertions 6 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 936349 951706 24217 + . alignment_id 0 ; Query GL50803_111950-t26_1-p1 ; Align 936349 1 1350 ; Align 937702 451 12990 ; Align 950695 4781 570 ; Align 951266 4971 441 utg265_pilon exonerate:protein2genome:local gene 418169 418777 696 + . gene_id 0 ; sequence GL50803_11196-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 418169 418777 . + . utg265_pilon exonerate:protein2genome:local exon 418169 418777 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 418169 418777 696 + . alignment_id 0 ; Query GL50803_11196-t26_1-p1 ; Align 418169 1 609 utg265_pilon exonerate:protein2genome:local gene 1001302 1004820 4644 - . gene_id 0 ; sequence GL50803_111967-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1001302 1004820 . - . utg265_pilon exonerate:protein2genome:local exon 1001302 1004820 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1001302 1004820 4644 - . alignment_id 0 ; Query GL50803_111967-t26_1-p1 ; Align 1004821 1 3519 utg212_pilon exonerate:protein2genome:local gene 247690 249195 1849 + . gene_id 0 ; sequence GL50803_111973-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 247690 249195 . + . utg212_pilon exonerate:protein2genome:local exon 247690 249195 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 247690 249195 1849 + . alignment_id 0 ; Query GL50803_111973-t26_1-p1 ; Align 247690 1 1506 utg16500_pilon exonerate:protein2genome:local gene 49120 49518 344 - . gene_id 0 ; sequence GL50803_111987-t26_1-p1 ; gene_orientation . utg16500_pilon exonerate:protein2genome:local cds 49120 49518 . - . utg16500_pilon exonerate:protein2genome:local exon 49120 49518 . - . insertions 0 ; deletions 0 utg16500_pilon exonerate:protein2genome:local similarity 49120 49518 344 - . alignment_id 0 ; Query GL50803_111987-t26_1-p1 ; Align 49519 72 399 utg265_pilon exonerate:protein2genome:local gene 424855 425832 1342 + . gene_id 0 ; sequence GL50803_11200-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 424855 425832 . + . utg265_pilon exonerate:protein2genome:local exon 424855 425832 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 424855 425832 1342 + . alignment_id 0 ; Query GL50803_11200-t26_1-p1 ; Align 424855 1 978 utg11_pilon exonerate:protein2genome:local gene 544605 708107 319 - . gene_id 0 ; sequence GL50803_112008-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 707706 708107 . - . utg11_pilon exonerate:protein2genome:local exon 707706 708107 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 707704 707705 . - . intron_id 1 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local intron 544698 707705 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 544698 544699 . - . intron_id 0 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local cds 544605 544697 . - . utg11_pilon exonerate:protein2genome:local exon 544605 544697 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 544605 708107 319 - . alignment_id 0 ; Query GL50803_112008-t26_1-p1 ; Align 708108 122 402 ; Align 544698 256 93 utg731_pilon exonerate:protein2genome:local gene 25311 72180 1095 - . gene_id 0 ; sequence GL50803_112009-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 71282 72180 . - . utg731_pilon exonerate:protein2genome:local exon 71282 72180 . - . insertions 3 ; deletions 13 utg731_pilon exonerate:protein2genome:local splice5 71280 71281 . - . intron_id 1 ; splice_site "GA" utg731_pilon exonerate:protein2genome:local intron 25564 71281 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 25564 25565 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 25311 25563 . - . utg731_pilon exonerate:protein2genome:local exon 25311 25563 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 25311 72180 1095 - . alignment_id 0 ; Query GL50803_112009-t26_1-p1 ; Align 72181 1 54 ; Align 72127 22 99 ; Align 72028 56 12 ; Align 72016 61 39 ; Align 71977 75 63 ; Align 71914 99 429 ; Align 71482 242 102 ; Align 71380 280 96 ; Align 25563 313 144 ; Align 25419 362 108 utg265_pilon exonerate:protein2genome:local gene 425836 426438 781 + . gene_id 0 ; sequence GL50803_11201-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 425836 426438 . + . utg265_pilon exonerate:protein2genome:local exon 425836 426438 . + . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 425836 426438 781 + . alignment_id 0 ; Query GL50803_11201-t26_1-p1 ; Align 425836 1 111 ; Align 425950 38 489 utg11_pilon exonerate:protein2genome:local gene 381575 382426 667 + . gene_id 0 ; sequence GL50803_112017-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 381575 382426 . + . utg11_pilon exonerate:protein2genome:local exon 381575 382426 . + . insertions 12 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 381575 382426 667 + . alignment_id 0 ; Query GL50803_112017-t26_1-p1 ; Align 381575 14 336 ; Align 381917 126 132 ; Align 382055 170 372 utg11_pilon exonerate:protein2genome:local gene 379785 381515 1592 + . gene_id 0 ; sequence GL50803_112018-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 379785 380311 . + . utg11_pilon exonerate:protein2genome:local exon 379785 380311 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 380312 380313 . + . intron_id 1 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 380312 380380 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 380379 380380 . + . intron_id 0 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local cds 380381 380969 . + . utg11_pilon exonerate:protein2genome:local exon 380381 380969 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 380970 380971 . + . intron_id 2 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 380970 381107 . + . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 381106 381107 . + . intron_id 1 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 381108 381515 . + . utg11_pilon exonerate:protein2genome:local exon 381108 381515 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 379785 381515 1592 + . alignment_id 0 ; Query GL50803_112018-t26_1-p1 ; Align 379785 265 525 ; Align 380382 441 588 ; Align 381108 637 408 utg265_pilon exonerate:protein2genome:local gene 428585 430135 2355 + . gene_id 0 ; sequence GL50803_11204-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 428585 430135 . + . utg265_pilon exonerate:protein2genome:local exon 428585 430135 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 428585 430135 2355 + . alignment_id 0 ; Query GL50803_11204-t26_1-p1 ; Align 428585 1 1551 utg64_pilon exonerate:protein2genome:local gene 16876 153637 756 + . gene_id 0 ; sequence GL50803_112048-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 16876 17282 . + . utg64_pilon exonerate:protein2genome:local exon 16876 17282 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 17283 17284 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 17283 71754 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 71753 71754 . + . intron_id 0 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local cds 71755 71906 . + . utg64_pilon exonerate:protein2genome:local exon 71755 71906 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 71907 71908 . + . intron_id 2 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 71907 153512 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 153511 153512 . + . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 153513 153637 . + . utg64_pilon exonerate:protein2genome:local exon 153513 153637 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 16876 153637 756 + . alignment_id 0 ; Query GL50803_112048-t26_1-p1 ; Align 16876 2 405 ; Align 71756 138 150 ; Align 153515 189 123 utg349_pilon exonerate:protein2genome:local gene 1465395 1467104 2293 - . gene_id 0 ; sequence GL50803_112059-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1465395 1467104 . - . utg349_pilon exonerate:protein2genome:local exon 1465395 1467104 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1465395 1467104 2293 - . alignment_id 0 ; Query GL50803_112059-t26_1-p1 ; Align 1467105 1 666 ; Align 1466439 224 1044 utg265_pilon exonerate:protein2genome:local gene 430797 431880 1546 + . gene_id 0 ; sequence GL50803_11206-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 430797 431880 . + . utg265_pilon exonerate:protein2genome:local exon 430797 431880 . + . insertions 6 ; deletions 2 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 430797 431880 1546 + . alignment_id 0 ; Query GL50803_11206-t26_1-p1 ; Align 430797 1 273 ; Align 431076 92 342 ; Align 431418 207 30 ; Align 431448 218 291 ; Align 431740 315 141 utg349_pilon exonerate:protein2genome:local gene 1420989 1422956 2908 - . gene_id 0 ; sequence GL50803_112063-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1420989 1422956 . - . utg349_pilon exonerate:protein2genome:local exon 1420989 1422956 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1420989 1422956 2908 - . alignment_id 0 ; Query GL50803_112063-t26_1-p1 ; Align 1422957 1 1968 utg265_pilon exonerate:protein2genome:local gene 431907 433487 1865 - . gene_id 0 ; sequence GL50803_11207-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 431907 433487 . - . utg265_pilon exonerate:protein2genome:local exon 431907 433487 . - . insertions 9 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 431907 433487 1865 - . alignment_id 0 ; Query GL50803_11207-t26_1-p1 ; Align 433488 1 1224 ; Align 432255 409 348 utg11_pilon exonerate:protein2genome:local gene 648754 649275 763 - . gene_id 0 ; sequence GL50803_112073-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 648754 649275 . - . utg11_pilon exonerate:protein2genome:local exon 648754 649275 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 648754 649275 763 - . alignment_id 0 ; Query GL50803_112073-t26_1-p1 ; Align 649276 1 522 utg212_pilon exonerate:protein2genome:local gene 405614 406135 763 + . gene_id 0 ; sequence GL50803_112073-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 405614 406135 . + . utg212_pilon exonerate:protein2genome:local exon 405614 406135 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 405614 406135 763 + . alignment_id 0 ; Query GL50803_112073-t26_1-p1 ; Align 405614 1 522 utg731_pilon exonerate:protein2genome:local gene 162749 167833 8271 - . gene_id 0 ; sequence GL50803_112076-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 162749 167833 . - . utg731_pilon exonerate:protein2genome:local exon 162749 167833 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 162749 167833 8271 - . alignment_id 0 ; Query GL50803_112076-t26_1-p1 ; Align 167834 1 3657 ; Align 164177 1222 1428 utg265_pilon exonerate:protein2genome:local gene 472049 473410 2415 + . gene_id 0 ; sequence GL50803_112079-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 472049 473410 . + . utg265_pilon exonerate:protein2genome:local exon 472049 473410 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 472049 473410 2415 + . alignment_id 0 ; Query GL50803_112079-t26_1-p1 ; Align 472049 1 1362 utg731_pilon exonerate:protein2genome:local gene 173795 175156 2415 + . gene_id 0 ; sequence GL50803_112079-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 173795 175156 . + . utg731_pilon exonerate:protein2genome:local exon 173795 175156 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 173795 175156 2415 + . alignment_id 0 ; Query GL50803_112079-t26_1-p1 ; Align 173795 1 1362 utg731_pilon exonerate:protein2genome:local gene 173743 175231 2196 - . gene_id 0 ; sequence GL50803_112080-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 173743 175231 . - . utg731_pilon exonerate:protein2genome:local exon 173743 175231 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 173743 175231 2196 - . alignment_id 0 ; Query GL50803_112080-t26_1-p1 ; Align 175232 1 1455 ; Align 173776 486 33 utg265_pilon exonerate:protein2genome:local gene 433876 435467 1868 + . gene_id 0 ; sequence GL50803_11209-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 433876 435467 . + . utg265_pilon exonerate:protein2genome:local exon 433876 435467 . + . insertions 6 ; deletions 2 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 433876 435467 1868 + . alignment_id 0 ; Query GL50803_11209-t26_1-p1 ; Align 433876 3 381 ; Align 434257 131 1029 ; Align 435292 474 99 ; Align 435393 507 6 ; Align 435399 510 69 utg731_pilon exonerate:protein2genome:local gene 231550 233284 2741 + . gene_id 0 ; sequence GL50803_112103-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 231550 233284 . + . utg731_pilon exonerate:protein2genome:local exon 231550 233284 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 231550 233284 2741 + . alignment_id 0 ; Query GL50803_112103-t26_1-p1 ; Align 231550 1 1659 ; Align 233210 554 6 ; Align 233216 557 69 utg731_pilon exonerate:protein2genome:local gene 278223 281882 5774 + . gene_id 0 ; sequence GL50803_112112-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 278223 281882 . + . utg731_pilon exonerate:protein2genome:local exon 278223 281882 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 278223 281882 5774 + . alignment_id 0 ; Query GL50803_112112-t26_1-p1 ; Align 278223 1 3660 utg18_pilon exonerate:protein2genome:local gene 131384 561759 1865 - . gene_id 0 ; sequence GL50803_112113-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 561549 561759 . - . utg18_pilon exonerate:protein2genome:local exon 561549 561759 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 561547 561548 . - . intron_id 1 ; splice_site "GC" utg18_pilon exonerate:protein2genome:local intron 443759 561548 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 443759 443760 . - . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 443693 443758 . - . utg18_pilon exonerate:protein2genome:local exon 443693 443758 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 443691 443692 . - . intron_id 2 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 325921 443692 . - . intron_id 2 utg18_pilon exonerate:protein2genome:local splice3 325921 325922 . - . intron_id 1 ; splice_site "AC" utg18_pilon exonerate:protein2genome:local cds 325601 325920 . - . utg18_pilon exonerate:protein2genome:local exon 325601 325920 . - . insertions 6 ; deletions 1 utg18_pilon exonerate:protein2genome:local splice5 325599 325600 . - . intron_id 3 ; splice_site "GG" utg18_pilon exonerate:protein2genome:local intron 257003 325600 . - . intron_id 3 utg18_pilon exonerate:protein2genome:local splice3 257003 257004 . - . intron_id 2 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 256341 257002 . - . utg18_pilon exonerate:protein2genome:local exon 256341 257002 . - . insertions 6 ; deletions 4 utg18_pilon exonerate:protein2genome:local splice5 256339 256340 . - . intron_id 4 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 177508 256340 . - . intron_id 4 utg18_pilon exonerate:protein2genome:local splice3 177508 177509 . - . intron_id 3 ; splice_site "AC" utg18_pilon exonerate:protein2genome:local cds 176902 177507 . - . utg18_pilon exonerate:protein2genome:local exon 176902 177507 . - . insertions 6 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 176900 176901 . - . intron_id 5 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 131538 176901 . - . intron_id 5 utg18_pilon exonerate:protein2genome:local splice3 131538 131539 . - . intron_id 4 ; splice_site "GG" utg18_pilon exonerate:protein2genome:local cds 131384 131537 . - . utg18_pilon exonerate:protein2genome:local exon 131384 131537 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 131384 561759 1865 - . alignment_id 0 ; Query GL50803_112113-t26_1-p1 ; Align 561760 22 210 ; Align 443757 93 63 ; Align 325919 115 81 ; Align 325835 142 99 ; Align 325736 176 57 ; Align 325676 195 75 ; Align 257003 220 309 ; Align 256688 323 87 ; Align 256601 356 258 ; Align 177507 443 171 ; Align 177333 500 213 ; Align 177117 571 213 ; Align 131537 643 153 utg47_pilon exonerate:protein2genome:local gene 1858583 1865500 8822 + . gene_id 0 ; sequence GL50803_112114-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1858583 1865500 . + . utg47_pilon exonerate:protein2genome:local exon 1858583 1865500 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1858583 1865500 8822 + . alignment_id 0 ; Query GL50803_112114-t26_1-p1 ; Align 1858583 1 3096 ; Align 1861679 1034 3015 ; Align 1864694 2040 807 utg99_pilon exonerate:protein2genome:local gene 418939 419103 107 + . gene_id 0 ; sequence GL50803_112118-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 418939 419103 . + . utg99_pilon exonerate:protein2genome:local exon 418939 419103 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 418939 419103 107 + . alignment_id 0 ; Query GL50803_112118-t26_1-p1 ; Align 418939 4 165 utg99_pilon exonerate:protein2genome:local gene 405948 415382 12131 - . gene_id 0 ; sequence GL50803_112121-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 405948 415382 . - . utg99_pilon exonerate:protein2genome:local exon 405948 415382 . - . insertions 3 ; deletions 10 utg99_pilon exonerate:protein2genome:local similarity 405948 415382 12131 - . alignment_id 0 ; Query GL50803_112121-t26_1-p1 ; Align 415383 449 162 ; Align 415221 504 1014 ; Align 414207 843 720 ; Align 413487 1085 66 ; Align 413421 1111 3129 ; Align 410292 2156 3282 ; Align 407007 3250 1059 utg349_pilon exonerate:protein2genome:local gene 853669 856182 3380 + . gene_id 0 ; sequence GL50803_112126-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 853669 856182 . + . utg349_pilon exonerate:protein2genome:local exon 853669 856182 . + . insertions 30 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 853669 856182 3380 + . alignment_id 0 ; Query GL50803_112126-t26_1-p1 ; Align 853669 4 390 ; Align 854062 134 135 ; Align 854200 179 144 ; Align 854359 227 522 ; Align 854884 401 633 ; Align 855517 613 600 ; Align 856123 813 60 utg349_pilon exonerate:protein2genome:local gene 40445 95487 4380 - . gene_id 0 ; sequence GL50803_112135-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 92169 95487 . - . utg349_pilon exonerate:protein2genome:local exon 92169 95487 . - . insertions 6 ; deletions 1 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local splice5 92167 92168 . - . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 40563 92168 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 40563 40564 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 40445 40562 . - . utg349_pilon exonerate:protein2genome:local exon 40445 40562 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 40445 95487 4380 - . alignment_id 0 ; Query GL50803_112135-t26_1-p1 ; Align 95488 1 270 ; Align 95217 91 207 ; Align 95010 161 144 ; Align 94863 209 1191 ; Align 93669 606 927 ; Align 92741 915 570 ; Align 40562 1106 117 utg265_pilon exonerate:protein2genome:local gene 443564 444640 1783 + . gene_id 0 ; sequence GL50803_11214-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 443564 444640 . + . utg265_pilon exonerate:protein2genome:local exon 443564 444640 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 443564 444640 1783 + . alignment_id 0 ; Query GL50803_11214-t26_1-p1 ; Align 443564 1 1077 utg11_pilon exonerate:protein2genome:local gene 1807823 1808649 712 - . gene_id 0 ; sequence GL50803_112150-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1807969 1808649 . - . utg11_pilon exonerate:protein2genome:local exon 1807969 1808649 . - . insertions 18 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1807967 1807968 . - . intron_id 1 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 1807934 1807968 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1807934 1807935 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1807823 1807933 . - . utg11_pilon exonerate:protein2genome:local exon 1807823 1807933 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1807823 1808649 712 - . alignment_id 0 ; Query GL50803_112150-t26_1-p1 ; Align 1808650 1 453 ; Align 1808194 152 63 ; Align 1808125 173 57 ; Align 1808062 192 24 ; Align 1808035 200 66 ; Align 1807934 222 18 ; Align 1807916 230 93 utg47_pilon exonerate:protein2genome:local gene 178887 179162 342 + . gene_id 0 ; sequence GL50803_112178-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 178887 179162 . + . utg47_pilon exonerate:protein2genome:local exon 178887 179162 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 178887 179162 342 + . alignment_id 0 ; Query GL50803_112178-t26_1-p1 ; Align 178887 1 75 ; Align 178965 26 198 utg265_pilon exonerate:protein2genome:local gene 449325 450230 992 + . gene_id 0 ; sequence GL50803_11218-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 449325 450230 . + . utg265_pilon exonerate:protein2genome:local exon 449325 450230 . + . insertions 0 ; deletions 5 utg265_pilon exonerate:protein2genome:local similarity 449325 450230 992 + . alignment_id 0 ; Query GL50803_11218-t26_1-p1 ; Align 449325 1 732 ; Align 450057 249 18 ; Align 450075 256 156 utg265_pilon exonerate:protein2genome:local gene 454238 455266 1394 - . gene_id 0 ; sequence GL50803_11220-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 454238 455266 . - . utg265_pilon exonerate:protein2genome:local exon 454238 455266 . - . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 454238 455266 1394 - . alignment_id 0 ; Query GL50803_11220-t26_1-p1 ; Align 455267 1 633 ; Align 454634 214 396 utg731_pilon exonerate:protein2genome:local gene 1480612 1481970 616 + . gene_id 0 ; sequence GL50803_112207-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1480612 1481043 . + . utg731_pilon exonerate:protein2genome:local exon 1480612 1481043 . + . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1481044 1481045 . + . intron_id 1 ; splice_site "GA" utg731_pilon exonerate:protein2genome:local intron 1481044 1481862 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1481861 1481862 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1481863 1481970 . + . utg731_pilon exonerate:protein2genome:local exon 1481863 1481970 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1480612 1481970 616 + . alignment_id 0 ; Query GL50803_112207-t26_1-p1 ; Align 1480612 29 198 ; Align 1480813 95 18 ; Align 1480837 101 207 ; Align 1481863 170 108 utg47_pilon exonerate:protein2genome:local gene 395250 922039 1598 - . gene_id 0 ; sequence GL50803_112208-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 921597 922039 . - . utg47_pilon exonerate:protein2genome:local exon 921597 922039 . - . insertions 9 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 921595 921596 . - . intron_id 1 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 831067 921596 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 831067 831068 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 830843 831066 . - . utg47_pilon exonerate:protein2genome:local exon 830843 831066 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 830841 830842 . - . intron_id 2 ; splice_site "TT" utg47_pilon exonerate:protein2genome:local intron 635428 830842 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 635428 635429 . - . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 635243 635427 . - . utg47_pilon exonerate:protein2genome:local exon 635243 635427 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 635241 635242 . - . intron_id 3 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 443643 635242 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 443643 443644 . - . intron_id 2 ; splice_site "TT" utg47_pilon exonerate:protein2genome:local cds 442855 443642 . - . utg47_pilon exonerate:protein2genome:local exon 442855 443642 . - . insertions 3 ; deletions 12 utg47_pilon exonerate:protein2genome:local splice5 442853 442854 . - . intron_id 4 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 395368 442854 . - . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 395368 395369 . - . intron_id 3 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 395250 395367 . - . utg47_pilon exonerate:protein2genome:local exon 395250 395367 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 395250 922039 1598 - . alignment_id 0 ; Query GL50803_112208-t26_1-p1 ; Align 922040 3 54 ; Align 921983 21 63 ; Align 921917 42 270 ; Align 921644 132 45 ; Align 831066 148 222 ; Align 635426 223 183 ; Align 443643 284 84 ; Align 443559 313 417 ; Align 443142 455 33 ; Align 443109 468 51 ; Align 443058 487 87 ; Align 442971 519 45 ; Align 442923 534 24 ; Align 442899 543 42 ; Align 395367 558 117 utg64_pilon exonerate:protein2genome:local gene 1022584 1022913 520 - . gene_id 0 ; sequence GL50803_112210-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1022584 1022913 . - . utg64_pilon exonerate:protein2genome:local exon 1022584 1022913 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1022584 1022913 520 - . alignment_id 0 ; Query GL50803_112210-t26_1-p1 ; Align 1022914 1 330 utg64_pilon exonerate:protein2genome:local gene 962308 964563 2486 - . gene_id 0 ; sequence GL50803_112235-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 962308 964563 . - . utg64_pilon exonerate:protein2genome:local exon 962308 964563 . - . insertions 9 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 962308 964563 2486 - . alignment_id 0 ; Query GL50803_112235-t26_1-p1 ; Align 964564 1 1455 ; Align 963100 486 792 utg64_pilon exonerate:protein2genome:local gene 926986 927141 137 - . gene_id 0 ; sequence GL50803_112250-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 926986 927141 . - . utg64_pilon exonerate:protein2genome:local exon 926986 927141 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 926986 927141 137 - . alignment_id 0 ; Query GL50803_112250-t26_1-p1 ; Align 927142 1 156 utg64_pilon exonerate:protein2genome:local gene 888551 912663 4378 + . gene_id 0 ; sequence GL50803_112258-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 888551 888608 . + . utg64_pilon exonerate:protein2genome:local exon 888551 888608 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 888609 888610 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 888609 909526 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 909525 909526 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 909527 912663 . + . utg64_pilon exonerate:protein2genome:local exon 909527 912663 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 888551 912663 4378 + . alignment_id 0 ; Query GL50803_112258-t26_1-p1 ; Align 888551 558 57 ; Align 909529 578 3135 utg265_pilon exonerate:protein2genome:local gene 820510 826588 8552 - . gene_id 0 ; sequence GL50803_112295-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 820510 826588 . - . utg265_pilon exonerate:protein2genome:local exon 820510 826588 . - . insertions 0 ; deletions 14 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 820510 826588 8552 - . alignment_id 0 ; Query GL50803_112295-t26_1-p1 ; Align 826589 18 417 ; Align 826172 160 333 ; Align 825839 274 114 ; Align 825725 315 471 ; Align 825253 472 453 ; Align 824800 624 576 ; Align 824224 819 702 ; Align 823522 1054 3012 utg308_pilon exonerate:protein2genome:local gene 925889 927499 1923 + . gene_id 0 ; sequence GL50803_11230-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 925889 927499 . + . utg308_pilon exonerate:protein2genome:local exon 925889 927499 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 925889 927499 1923 + . alignment_id 0 ; Query GL50803_11230-t26_1-p1 ; Align 925889 1 1185 ; Align 927074 397 426 utg349_pilon exonerate:protein2genome:local gene 78168 79494 2311 + . gene_id 0 ; sequence GL50803_112304-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 78168 79494 . + . utg349_pilon exonerate:protein2genome:local exon 78168 79494 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 78168 79494 2311 + . alignment_id 0 ; Query GL50803_112304-t26_1-p1 ; Align 78168 1 1182 ; Align 79351 395 144 utg11_pilon exonerate:protein2genome:local gene 534623 537088 2885 + . gene_id 0 ; sequence GL50803_112305-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 534623 537088 . + . utg11_pilon exonerate:protein2genome:local exon 534623 537088 . + . insertions 27 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 534623 537088 2885 + . alignment_id 0 ; Query GL50803_112305-t26_1-p1 ; Align 534623 1 621 ; Align 535247 208 258 ; Align 535511 294 324 ; Align 535844 402 27 ; Align 535877 411 480 ; Align 536360 571 729 utg308_pilon exonerate:protein2genome:local gene 925641 925862 231 + . gene_id 0 ; sequence GL50803_11231-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 925641 925862 . + . utg308_pilon exonerate:protein2genome:local exon 925641 925862 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 925641 925862 231 + . alignment_id 0 ; Query GL50803_11231-t26_1-p1 ; Align 925641 1 222 utg349_pilon exonerate:protein2genome:local gene 78168 79494 2311 + . gene_id 0 ; sequence GL50803_112312-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 78168 79494 . + . utg349_pilon exonerate:protein2genome:local exon 78168 79494 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 78168 79494 2311 + . alignment_id 0 ; Query GL50803_112312-t26_1-p1 ; Align 78168 1 1182 ; Align 79351 395 144 utg212_pilon exonerate:protein2genome:local gene 14093 115880 588 + . gene_id 0 ; sequence GL50803_112314-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14093 14449 . + . utg212_pilon exonerate:protein2genome:local exon 14093 14449 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 14450 14451 . + . intron_id 1 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local intron 14450 115739 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115738 115739 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115740 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115740 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14093 115880 588 + . alignment_id 0 ; Query GL50803_112314-t26_1-p1 ; Align 14093 4 357 ; Align 115740 123 141 utg308_pilon exonerate:protein2genome:local gene 461608 463132 984 - . gene_id 0 ; sequence GL50803_112331-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 462368 463132 . - . utg308_pilon exonerate:protein2genome:local exon 462368 463132 . - . insertions 21 ; deletions 1 utg308_pilon exonerate:protein2genome:local splice5 462366 462367 . - . intron_id 1 ; splice_site "CT" utg308_pilon exonerate:protein2genome:local intron 461854 462367 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 461854 461855 . - . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 461608 461853 . - . utg308_pilon exonerate:protein2genome:local exon 461608 461853 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 461608 463132 984 - . alignment_id 0 ; Query GL50803_112331-t26_1-p1 ; Align 463133 1 96 ; Align 463031 33 15 ; Align 463010 38 189 ; Align 462821 102 189 ; Align 462629 165 204 ; Align 462419 233 51 ; Align 461854 250 48 ; Align 461803 266 195 utg18_pilon exonerate:protein2genome:local gene 94599 187281 1022 - . gene_id 0 ; sequence GL50803_112341-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 187109 187281 . - . utg18_pilon exonerate:protein2genome:local exon 187109 187281 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 187107 187108 . - . intron_id 1 ; splice_site "GG" utg18_pilon exonerate:protein2genome:local intron 95173 187108 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 95173 95174 . - . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 94599 95172 . - . utg18_pilon exonerate:protein2genome:local exon 94599 95172 . - . insertions 3 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 94599 187281 1022 - . alignment_id 0 ; Query GL50803_112341-t26_1-p1 ; Align 187282 1 171 ; Align 95172 59 255 ; Align 94917 145 204 ; Align 94710 213 111 utg99_pilon exonerate:protein2genome:local gene 43380 44120 1022 + . gene_id 0 ; sequence GL50803_112341-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 43380 44120 . + . utg99_pilon exonerate:protein2genome:local exon 43380 44120 . + . insertions 3 ; deletions 3 utg99_pilon exonerate:protein2genome:local similarity 43380 44120 1022 + . alignment_id 0 ; Query GL50803_112341-t26_1-p1 ; Align 43380 1 174 ; Align 43554 61 249 ; Align 43803 145 201 ; Align 44007 212 114 utg731_pilon exonerate:protein2genome:local gene 932837 933787 1355 + . gene_id 0 ; sequence GL50803_112348-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 932837 933787 . + . utg731_pilon exonerate:protein2genome:local exon 932837 933787 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 932837 933787 1355 + . alignment_id 0 ; Query GL50803_112348-t26_1-p1 ; Align 932837 1 951 utg731_pilon exonerate:protein2genome:local gene 970214 970402 164 - . gene_id 0 ; sequence GL50803_112359-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 970214 970402 . - . utg731_pilon exonerate:protein2genome:local exon 970214 970402 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 970214 970402 164 - . alignment_id 0 ; Query GL50803_112359-t26_1-p1 ; Align 970403 2 189 utg731_pilon exonerate:protein2genome:local gene 890567 891037 687 + . gene_id 0 ; sequence GL50803_112368-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 890567 891037 . + . utg731_pilon exonerate:protein2genome:local exon 890567 891037 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 890567 891037 687 + . alignment_id 0 ; Query GL50803_112368-t26_1-p1 ; Align 890567 1 471 utg308_pilon exonerate:protein2genome:local gene 920638 921921 1852 - . gene_id 0 ; sequence GL50803_11237-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 920638 921921 . - . utg308_pilon exonerate:protein2genome:local exon 920638 921921 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 920638 921921 1852 - . alignment_id 0 ; Query GL50803_11237-t26_1-p1 ; Align 921922 1 1284 utg11_pilon exonerate:protein2genome:local gene 1265694 1271252 8251 + . gene_id 0 ; sequence GL50803_112408-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1265694 1271252 . + . utg11_pilon exonerate:protein2genome:local exon 1265694 1271252 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1265694 1271252 8251 + . alignment_id 0 ; Query GL50803_112408-t26_1-p1 ; Align 1265694 1 5559 utg11_pilon exonerate:protein2genome:local gene 1285133 1286092 1265 + . gene_id 0 ; sequence GL50803_112416-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1285133 1286092 . + . utg11_pilon exonerate:protein2genome:local exon 1285133 1286092 . + . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 1285133 1286092 1265 + . alignment_id 0 ; Query GL50803_112416-t26_1-p1 ; Align 1285133 245 141 ; Align 1285274 296 819 utg11_pilon exonerate:protein2genome:local gene 1316949 1321079 4306 - . gene_id 0 ; sequence GL50803_112428-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1316949 1321079 . - . utg11_pilon exonerate:protein2genome:local exon 1316949 1321079 . - . insertions 0 ; deletions 6 utg11_pilon exonerate:protein2genome:local similarity 1316949 1321079 4306 - . alignment_id 0 ; Query GL50803_112428-t26_1-p1 ; Align 1321080 3 1638 ; Align 1319442 551 885 ; Align 1318557 850 1608 utg11_pilon exonerate:protein2genome:local gene 1167717 1169696 2612 + . gene_id 0 ; sequence GL50803_112432-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1167717 1169696 . + . utg11_pilon exonerate:protein2genome:local exon 1167717 1169696 . + . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1167717 1169696 2612 + . alignment_id 0 ; Query GL50803_112432-t26_1-p1 ; Align 1167717 2 537 ; Align 1168257 181 24 ; Align 1168284 189 1413 utg47_pilon exonerate:protein2genome:local gene 753411 753572 126 + . gene_id 0 ; sequence GL50803_112435-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 753411 753572 . + . utg47_pilon exonerate:protein2genome:local exon 753411 753572 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 753411 753572 126 + . alignment_id 0 ; Query GL50803_112435-t26_1-p1 ; Align 753411 6 162 utg308_pilon exonerate:protein2genome:local gene 915486 917078 2024 + . gene_id 0 ; sequence GL50803_11244-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 915486 917078 . + . utg308_pilon exonerate:protein2genome:local exon 915486 917078 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 915486 917078 2024 + . alignment_id 0 ; Query GL50803_11244-t26_1-p1 ; Align 915486 1 1593 utg265_pilon exonerate:protein2genome:local gene 548578 584563 290 + . gene_id 0 ; sequence GL50803_112445-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 548578 548718 . + . utg265_pilon exonerate:protein2genome:local exon 548578 548718 . + . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local splice5 548719 548720 . + . intron_id 1 ; splice_site "CC" utg265_pilon exonerate:protein2genome:local intron 548719 584359 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 584358 584359 . + . intron_id 0 ; splice_site "TG" utg265_pilon exonerate:protein2genome:local cds 584360 584563 . + . utg265_pilon exonerate:protein2genome:local exon 584360 584563 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 548578 584563 290 + . alignment_id 0 ; Query GL50803_112445-t26_1-p1 ; Align 548578 1 21 ; Align 548599 9 120 ; Align 584360 49 204 utg308_pilon exonerate:protein2genome:local gene 914383 915405 987 - . gene_id 0 ; sequence GL50803_11245-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 914383 915405 . - . utg308_pilon exonerate:protein2genome:local exon 914383 915405 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 914383 915405 987 - . alignment_id 0 ; Query GL50803_11245-t26_1-p1 ; Align 915406 1 1023 utg308_pilon exonerate:protein2genome:local gene 913491 914069 950 - . gene_id 0 ; sequence GL50803_11246-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 913491 914069 . - . utg308_pilon exonerate:protein2genome:local exon 913491 914069 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 913491 914069 950 - . alignment_id 0 ; Query GL50803_11246-t26_1-p1 ; Align 914070 1 579 utg308_pilon exonerate:protein2genome:local gene 912842 913432 1039 + . gene_id 0 ; sequence GL50803_11247-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 912842 913432 . + . utg308_pilon exonerate:protein2genome:local exon 912842 913432 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 912842 913432 1039 + . alignment_id 0 ; Query GL50803_11247-t26_1-p1 ; Align 912842 1 591 utg308_pilon exonerate:protein2genome:local gene 90628 91875 1689 + . gene_id 0 ; sequence GL50803_112473-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 90628 91875 . + . utg308_pilon exonerate:protein2genome:local exon 90628 91875 . + . insertions 15 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 90628 91875 1689 + . alignment_id 0 ; Query GL50803_112473-t26_1-p1 ; Align 90628 1 129 ; Align 90769 44 270 ; Align 91042 134 834 utg308_pilon exonerate:protein2genome:local gene 911937 912737 1170 - . gene_id 0 ; sequence GL50803_11248-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 911937 912737 . - . utg308_pilon exonerate:protein2genome:local exon 911937 912737 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 911937 912737 1170 - . alignment_id 0 ; Query GL50803_11248-t26_1-p1 ; Align 912738 1 111 ; Align 912624 38 687 utg47_pilon exonerate:protein2genome:local gene 113142 116837 4842 - . gene_id 0 ; sequence GL50803_112489-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 113142 116837 . - . utg47_pilon exonerate:protein2genome:local exon 113142 116837 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 113142 116837 4842 - . alignment_id 0 ; Query GL50803_112489-t26_1-p1 ; Align 116838 1 171 ; Align 116667 59 2709 ; Align 113958 963 816 utg265_pilon exonerate:protein2genome:local gene 869852 872623 1582 - . gene_id 0 ; sequence GL50803_112518-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 870910 872623 . - . utg265_pilon exonerate:protein2genome:local exon 870910 872623 . - . insertions 30 ; deletions 4 utg265_pilon exonerate:protein2genome:local splice5 870908 870909 . - . intron_id 1 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 870100 870909 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 870100 870101 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 869852 870099 . - . utg265_pilon exonerate:protein2genome:local exon 869852 870099 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 869852 872623 1582 - . alignment_id 0 ; Query GL50803_112518-t26_1-p1 ; Align 872624 1 438 ; Align 872171 147 666 ; Align 871505 373 438 ; Align 871064 519 24 ; Align 871028 527 117 ; Align 870098 567 246 utg265_pilon exonerate:protein2genome:local gene 663988 664509 784 + . gene_id 0 ; sequence GL50803_112519-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 663988 664509 . + . utg265_pilon exonerate:protein2genome:local exon 663988 664509 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 663988 664509 784 + . alignment_id 0 ; Query GL50803_112519-t26_1-p1 ; Align 663988 11 522 utg47_pilon exonerate:protein2genome:local gene 1819915 1820691 823 + . gene_id 0 ; sequence GL50803_112550-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1819915 1820691 . + . utg47_pilon exonerate:protein2genome:local exon 1819915 1820691 . + . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1819915 1820691 823 + . alignment_id 0 ; Query GL50803_112550-t26_1-p1 ; Align 1819915 195 33 ; Align 1819948 208 633 ; Align 1820581 420 111 utg265_pilon exonerate:protein2genome:local gene 871454 872623 1066 - . gene_id 0 ; sequence GL50803_112553-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 871645 872623 . - . utg265_pilon exonerate:protein2genome:local exon 871645 872623 . - . insertions 15 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 871643 871644 . - . intron_id 1 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 871603 871644 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 871603 871604 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 871454 871602 . - . utg265_pilon exonerate:protein2genome:local exon 871454 871602 . - . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 871454 872623 1066 - . alignment_id 0 ; Query GL50803_112553-t26_1-p1 ; Align 872624 1 438 ; Align 872171 147 525 ; Align 871601 323 81 ; Align 871520 354 66 utg99_pilon exonerate:protein2genome:local gene 437520 438695 1606 + . gene_id 0 ; sequence GL50803_112557-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 437520 438695 . + . utg99_pilon exonerate:protein2genome:local exon 437520 438695 . + . insertions 0 ; deletions 5 utg99_pilon exonerate:protein2genome:local similarity 437520 438695 1606 + . alignment_id 0 ; Query GL50803_112557-t26_1-p1 ; Align 437520 1 951 ; Align 438471 321 42 ; Align 438513 336 36 ; Align 438549 349 147 utg99_pilon exonerate:protein2genome:local gene 480048 481469 1743 + . gene_id 0 ; sequence GL50803_112572-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 480048 481469 . + . utg99_pilon exonerate:protein2genome:local exon 480048 481469 . + . insertions 0 ; deletions 3 utg99_pilon exonerate:protein2genome:local similarity 480048 481469 1743 + . alignment_id 0 ; Query GL50803_112572-t26_1-p1 ; Align 480048 1 1293 ; Align 481341 435 129 utg212_pilon exonerate:protein2genome:local gene 135040 135360 403 + . gene_id 0 ; sequence GL50803_112579-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 135040 135360 . + . utg212_pilon exonerate:protein2genome:local exon 135040 135360 . + . insertions 0 ; deletions 2 utg212_pilon exonerate:protein2genome:local similarity 135040 135360 403 + . alignment_id 0 ; Query GL50803_112579-t26_1-p1 ; Align 135040 1 186 ; Align 135226 65 135 utg99_pilon exonerate:protein2genome:local gene 52098 330305 1800 - . gene_id 0 ; sequence GL50803_112584-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 329086 330305 . - . utg99_pilon exonerate:protein2genome:local exon 329086 330305 . - . insertions 12 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 329084 329085 . - . intron_id 1 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 260188 329085 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 260188 260189 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 260127 260187 . - . utg99_pilon exonerate:protein2genome:local exon 260127 260187 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 260125 260126 . - . intron_id 2 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 192511 260126 . - . intron_id 2 utg99_pilon exonerate:protein2genome:local splice3 192511 192512 . - . intron_id 1 ; splice_site "AC" utg99_pilon exonerate:protein2genome:local cds 192036 192510 . - . utg99_pilon exonerate:protein2genome:local exon 192036 192510 . - . insertions 18 ; deletions 4 utg99_pilon exonerate:protein2genome:local splice5 192034 192035 . - . intron_id 3 ; splice_site "GC" utg99_pilon exonerate:protein2genome:local intron 158507 192035 . - . intron_id 3 utg99_pilon exonerate:protein2genome:local splice3 158507 158508 . - . intron_id 2 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 158165 158506 . - . utg99_pilon exonerate:protein2genome:local exon 158165 158506 . - . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 158163 158164 . - . intron_id 4 ; splice_site "GC" utg99_pilon exonerate:protein2genome:local intron 52508 158164 . - . intron_id 4 utg99_pilon exonerate:protein2genome:local splice3 52508 52509 . - . intron_id 3 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 52296 52507 . - . utg99_pilon exonerate:protein2genome:local exon 52296 52507 . - . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 52294 52295 . - . intron_id 5 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 52242 52295 . - . intron_id 5 utg99_pilon exonerate:protein2genome:local splice3 52242 52243 . - . intron_id 4 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 52098 52241 . - . utg99_pilon exonerate:protein2genome:local exon 52098 52241 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 52098 330305 1800 - . alignment_id 0 ; Query GL50803_112584-t26_1-p1 ; Align 330306 2 627 ; Align 329676 211 255 ; Align 329415 296 63 ; Align 329349 317 261 ; Align 260187 405 60 ; Align 192511 425 42 ; Align 192466 439 90 ; Align 192364 469 105 ; Align 192259 507 87 ; Align 192172 537 99 ; Align 192070 570 33 ; Align 158505 582 243 ; Align 158259 663 93 ; Align 52506 695 87 ; Align 52416 724 120 ; Align 52242 764 144 utg212_pilon exonerate:protein2genome:local gene 156693 156866 158 - . gene_id 0 ; sequence GL50803_112585-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 156693 156866 . - . utg212_pilon exonerate:protein2genome:local exon 156693 156866 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 156693 156866 158 - . alignment_id 0 ; Query GL50803_112585-t26_1-p1 ; Align 156867 1 174 utg47_pilon exonerate:protein2genome:local gene 1917462 1918130 745 - . gene_id 0 ; sequence GL50803_112604-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1917462 1918130 . - . utg47_pilon exonerate:protein2genome:local exon 1917462 1918130 . - . insertions 9 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1917462 1918130 745 - . alignment_id 0 ; Query GL50803_112604-t26_1-p1 ; Align 1918131 4 213 ; Align 1917915 75 396 ; Align 1917513 207 51 utg11_pilon exonerate:protein2genome:local gene 481294 481444 113 + . gene_id 0 ; sequence GL50803_112605-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 481294 481444 . + . utg11_pilon exonerate:protein2genome:local exon 481294 481444 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 481294 481444 113 + . alignment_id 0 ; Query GL50803_112605-t26_1-p1 ; Align 481294 2 81 ; Align 481376 29 69 utg308_pilon exonerate:protein2genome:local gene 298980 299447 348 - . gene_id 0 ; sequence GL50803_112608-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 298980 299447 . - . utg308_pilon exonerate:protein2genome:local exon 298980 299447 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 298980 299447 348 - . alignment_id 0 ; Query GL50803_112608-t26_1-p1 ; Align 299448 1 468 utg99_pilon exonerate:protein2genome:local gene 257199 258707 1888 + . gene_id 0 ; sequence GL50803_112630-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 257199 258707 . + . utg99_pilon exonerate:protein2genome:local exon 257199 258707 . + . insertions 3 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 257199 258707 1888 + . alignment_id 0 ; Query GL50803_112630-t26_1-p1 ; Align 257199 1 657 ; Align 257856 221 651 ; Align 258510 438 198 utg47_pilon exonerate:protein2genome:local gene 1036492 1041557 6818 - . gene_id 0 ; sequence GL50803_112633-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1036492 1041557 . - . utg47_pilon exonerate:protein2genome:local exon 1036492 1041557 . - . insertions 18 ; deletions 12 ; frameshifts 5 utg47_pilon exonerate:protein2genome:local similarity 1036492 1041557 6818 - . alignment_id 0 ; Query GL50803_112633-t26_1-p1 ; Align 1041558 1 777 ; Align 1040781 261 183 ; Align 1040595 322 78 ; Align 1040517 349 231 ; Align 1040286 427 177 ; Align 1040109 489 450 ; Align 1039659 640 189 ; Align 1039467 703 45 ; Align 1039421 718 156 ; Align 1039265 771 396 ; Align 1038862 903 570 ; Align 1038289 1093 474 ; Align 1037812 1251 198 ; Align 1037614 1318 138 ; Align 1037473 1364 144 ; Align 1037329 1414 720 ; Align 1036609 1655 117 utg47_pilon exonerate:protein2genome:local gene 1699424 2271318 1035 - . gene_id 0 ; sequence GL50803_112647-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2271111 2271318 . - . utg47_pilon exonerate:protein2genome:local exon 2271111 2271318 . - . insertions 9 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 2271109 2271110 . - . intron_id 1 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 2151881 2271110 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 2151881 2151882 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2151829 2151880 . - . utg47_pilon exonerate:protein2genome:local exon 2151829 2151880 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 2151827 2151828 . - . intron_id 2 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local intron 1957414 2151828 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1957414 1957415 . - . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1957201 1957413 . - . utg47_pilon exonerate:protein2genome:local exon 1957201 1957413 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1957199 1957200 . - . intron_id 3 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 1838473 1957200 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 1838473 1838474 . - . intron_id 2 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1838000 1838472 . - . utg47_pilon exonerate:protein2genome:local exon 1838000 1838472 . - . insertions 3 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1837998 1837999 . - . intron_id 4 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1699726 1837999 . - . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 1699726 1699727 . - . intron_id 3 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1699424 1699725 . - . utg47_pilon exonerate:protein2genome:local exon 1699424 1699725 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1699424 2271318 1035 - . alignment_id 0 ; Query GL50803_112647-t26_1-p1 ; Align 2271319 10 54 ; Align 2271259 28 75 ; Align 2271181 53 33 ; Align 2271148 66 36 ; Align 2151879 79 48 ; Align 1957413 96 210 ; Align 1838472 167 243 ; Align 1838226 248 129 ; Align 1838097 292 51 ; Align 1838046 310 45 ; Align 1699724 326 168 ; Align 1699556 383 12 ; Align 1699544 389 120 utg349_pilon exonerate:protein2genome:local gene 40454 95487 4262 - . gene_id 0 ; sequence GL50803_112673-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 92172 95487 . - . utg349_pilon exonerate:protein2genome:local exon 92172 95487 . - . insertions 6 ; deletions 1 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local splice5 92170 92171 . - . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 40590 92171 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 40590 40591 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 40454 40589 . - . utg349_pilon exonerate:protein2genome:local exon 40454 40589 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 40454 95487 4262 - . alignment_id 0 ; Query GL50803_112673-t26_1-p1 ; Align 95488 1 270 ; Align 95217 91 207 ; Align 95010 161 144 ; Align 94863 209 1191 ; Align 93669 606 927 ; Align 92741 915 567 ; Align 40589 1105 135 utg47_pilon exonerate:protein2genome:local gene 827262 918542 614 - . gene_id 0 ; sequence GL50803_112678-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 918399 918542 . - . utg47_pilon exonerate:protein2genome:local exon 918399 918542 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 918397 918398 . - . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 827832 918398 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 827832 827833 . - . intron_id 0 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 827262 827831 . - . utg47_pilon exonerate:protein2genome:local exon 827262 827831 . - . insertions 3 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 827262 918542 614 - . alignment_id 0 ; Query GL50803_112678-t26_1-p1 ; Align 918543 2 42 ; Align 918498 16 99 ; Align 827832 49 42 ; Align 827787 63 84 ; Align 827703 92 198 ; Align 827505 159 123 ; Align 827382 201 57 ; Align 827325 221 63 utg18_pilon exonerate:protein2genome:local gene 405810 408200 3383 - . gene_id 0 ; sequence GL50803_112681-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 405810 408200 . - . utg18_pilon exonerate:protein2genome:local exon 405810 408200 . - . insertions 3 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 405810 408200 3383 - . alignment_id 0 ; Query GL50803_112681-t26_1-p1 ; Align 408201 34 249 ; Align 407949 117 2139 utg18_pilon exonerate:protein2genome:local gene 404140 404898 1286 - . gene_id 0 ; sequence GL50803_112682-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 404140 404898 . - . utg18_pilon exonerate:protein2genome:local exon 404140 404898 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 404140 404898 1286 - . alignment_id 0 ; Query GL50803_112682-t26_1-p1 ; Align 404899 1 759 utg11_pilon exonerate:protein2genome:local gene 912449 917929 6922 - . gene_id 0 ; sequence GL50803_112692-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 912449 917929 . - . utg11_pilon exonerate:protein2genome:local exon 912449 917929 . - . insertions 12 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 912449 917929 6922 - . alignment_id 0 ; Query GL50803_112692-t26_1-p1 ; Align 917930 1 1203 ; Align 916721 402 510 ; Align 916208 572 3234 ; Align 912971 1650 522 utg11_pilon exonerate:protein2genome:local gene 437375 438406 758 - . gene_id 0 ; sequence GL50803_112693-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 438139 438406 . - . utg11_pilon exonerate:protein2genome:local exon 438139 438406 . - . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 438137 438138 . - . intron_id 1 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local intron 437902 438138 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 437902 437903 . - . intron_id 0 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 437375 437901 . - . utg11_pilon exonerate:protein2genome:local exon 437375 437901 . - . insertions 15 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 437375 438406 758 - . alignment_id 0 ; Query GL50803_112693-t26_1-p1 ; Align 438407 1 45 ; Align 438356 16 216 ; Align 437900 89 201 ; Align 437684 156 309 utg18_pilon exonerate:protein2genome:local gene 544365 544541 128 + . gene_id 0 ; sequence GL50803_112694-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 544365 544541 . + . utg18_pilon exonerate:protein2genome:local exon 544365 544541 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 544365 544541 128 + . alignment_id 0 ; Query GL50803_112694-t26_1-p1 ; Align 544365 1 177 utg18_pilon exonerate:protein2genome:local gene 543372 544667 1188 - . gene_id 0 ; sequence GL50803_112695-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 543372 544667 . - . utg18_pilon exonerate:protein2genome:local exon 543372 544667 . - . insertions 15 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 543372 544667 1188 - . alignment_id 0 ; Query GL50803_112695-t26_1-p1 ; Align 544668 22 27 ; Align 544638 31 894 ; Align 543738 329 114 ; Align 543618 367 246 utg11_pilon exonerate:protein2genome:local gene 707703 708101 316 - . gene_id 0 ; sequence GL50803_112696-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 707703 708101 . - . utg11_pilon exonerate:protein2genome:local exon 707703 708101 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 707703 708101 316 - . alignment_id 0 ; Query GL50803_112696-t26_1-p1 ; Align 708102 46 399 utg265_pilon exonerate:protein2genome:local gene 716650 717120 316 - . gene_id 0 ; sequence GL50803_112696-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 716650 717120 . - . utg265_pilon exonerate:protein2genome:local exon 716650 717120 . - . insertions 9 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 716650 717120 316 - . alignment_id 0 ; Query GL50803_112696-t26_1-p1 ; Align 717121 46 402 ; Align 716710 180 60 utg16500_pilon exonerate:protein2genome:local gene 49039 49518 316 - . gene_id 0 ; sequence GL50803_112696-t26_1-p1 ; gene_orientation . utg16500_pilon exonerate:protein2genome:local cds 49039 49518 . - . utg16500_pilon exonerate:protein2genome:local exon 49039 49518 . - . insertions 9 ; deletions 0 utg16500_pilon exonerate:protein2genome:local similarity 49039 49518 316 - . alignment_id 0 ; Query GL50803_112696-t26_1-p1 ; Align 49519 46 399 ; Align 49111 179 72 utg47_pilon exonerate:protein2genome:local gene 1541921 1545199 4718 - . gene_id 0 ; sequence GL50803_112718-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1541921 1545199 . - . utg47_pilon exonerate:protein2genome:local exon 1541921 1545199 . - . insertions 0 ; deletions 7 ; frameshifts 3 utg47_pilon exonerate:protein2genome:local similarity 1541921 1545199 4718 - . alignment_id 0 ; Query GL50803_112718-t26_1-p1 ; Align 1545200 1 1461 ; Align 1543738 488 1194 ; Align 1542542 887 339 ; Align 1542203 1001 15 ; Align 1542188 1008 168 ; Align 1542020 1067 99 utg47_pilon exonerate:protein2genome:local gene 1518747 1518929 178 + . gene_id 0 ; sequence GL50803_112728-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1518747 1518929 . + . utg47_pilon exonerate:protein2genome:local exon 1518747 1518929 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1518747 1518929 178 + . alignment_id 0 ; Query GL50803_112728-t26_1-p1 ; Align 1518747 1 183 utg47_pilon exonerate:protein2genome:local gene 1517482 1520840 4934 - . gene_id 0 ; sequence GL50803_112729-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1517818 1520840 . - . utg47_pilon exonerate:protein2genome:local exon 1517818 1520840 . - . insertions 3 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 1517816 1517817 . - . intron_id 1 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 1517783 1517817 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1517783 1517784 . - . intron_id 0 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1517482 1517782 . - . utg47_pilon exonerate:protein2genome:local exon 1517482 1517782 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1517482 1520840 4934 - . alignment_id 0 ; Query GL50803_112729-t26_1-p1 ; Align 1520841 1 2109 ; Align 1518729 704 882 ; Align 1517847 999 27 ; Align 1517782 1009 300 utg308_pilon exonerate:protein2genome:local gene 803028 809561 8357 + . gene_id 0 ; sequence GL50803_112784-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 803028 809561 . + . utg308_pilon exonerate:protein2genome:local exon 803028 809561 . + . insertions 3 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 803028 809561 8357 + . alignment_id 0 ; Query GL50803_112784-t26_1-p1 ; Align 803028 25 1326 ; Align 804354 468 1026 ; Align 805383 810 2643 ; Align 808026 1692 1536 utg308_pilon exonerate:protein2genome:local gene 794045 799597 7491 - . gene_id 0 ; sequence GL50803_112787-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 794045 799597 . - . utg308_pilon exonerate:protein2genome:local exon 794045 799597 . - . insertions 24 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 794045 799597 7491 - . alignment_id 0 ; Query GL50803_112787-t26_1-p1 ; Align 799598 1 921 ; Align 798671 308 1617 ; Align 797054 848 1053 ; Align 795992 1199 258 ; Align 795725 1285 1680 utg64_pilon exonerate:protein2genome:local gene 766741 1026697 1816 - . gene_id 0 ; sequence GL50803_112801-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 1026229 1026697 . - . utg64_pilon exonerate:protein2genome:local exon 1026229 1026697 . - . insertions 18 ; deletions 2 utg64_pilon exonerate:protein2genome:local splice5 1026227 1026228 . - . intron_id 1 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local intron 846818 1026228 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 846818 846819 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 846414 846817 . - . utg64_pilon exonerate:protein2genome:local exon 846414 846817 . - . insertions 9 ; deletions 4 utg64_pilon exonerate:protein2genome:local splice5 846412 846413 . - . intron_id 2 ; splice_site "AC" utg64_pilon exonerate:protein2genome:local intron 833459 846413 . - . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 833459 833460 . - . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 832321 833458 . - . utg64_pilon exonerate:protein2genome:local exon 832321 833458 . - . insertions 3 ; deletions 9 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local splice5 832319 832320 . - . intron_id 3 ; splice_site "AA" utg64_pilon exonerate:protein2genome:local intron 766882 832320 . - . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 766882 766883 . - . intron_id 2 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 766741 766881 . - . utg64_pilon exonerate:protein2genome:local exon 766741 766881 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 766741 1026697 1816 - . alignment_id 0 ; Query GL50803_112801-t26_1-p1 ; Align 1026698 26 72 ; Align 1026626 51 21 ; Align 1026599 58 165 ; Align 1026428 113 24 ; Align 1026404 122 108 ; Align 1026290 158 60 ; Align 846816 179 54 ; Align 846762 198 66 ; Align 846693 220 54 ; Align 846636 238 36 ; Align 846597 250 63 ; Align 846534 273 24 ; Align 846510 282 96 ; Align 833459 314 72 ; Align 833384 338 75 ; Align 833309 366 96 ; Align 833212 398 162 ; Align 833050 454 531 ; Align 832519 633 51 ; Align 832468 651 66 ; Align 832402 674 81 ; Align 766882 701 141 utg308_pilon exonerate:protein2genome:local gene 636538 640676 5133 - . gene_id 0 ; sequence GL50803_112810-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 636538 640676 . - . utg308_pilon exonerate:protein2genome:local exon 636538 640676 . - . insertions 12 ; deletions 4 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 636538 640676 5133 - . alignment_id 0 ; Query GL50803_112810-t26_1-p1 ; Align 640677 414 468 ; Align 640209 573 1815 ; Align 638382 1178 1770 ; Align 636610 1769 72 utg308_pilon exonerate:protein2genome:local gene 642209 644314 3247 + . gene_id 0 ; sequence GL50803_112811-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 642209 644314 . + . utg308_pilon exonerate:protein2genome:local exon 642209 644314 . + . insertions 0 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 642209 644314 3247 + . alignment_id 0 ; Query GL50803_112811-t26_1-p1 ; Align 642209 1 561 ; Align 642770 191 1545 utg47_pilon exonerate:protein2genome:local gene 1917478 1917639 111 + . gene_id 0 ; sequence GL50803_112827-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1917478 1917639 . + . utg47_pilon exonerate:protein2genome:local exon 1917478 1917639 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1917478 1917639 111 + . alignment_id 0 ; Query GL50803_112827-t26_1-p1 ; Align 1917478 1 36 ; Align 1917517 13 18 ; Align 1917538 19 102 utg47_pilon exonerate:protein2genome:local gene 1703732 1706184 2779 + . gene_id 0 ; sequence GL50803_112828-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1703732 1706184 . + . utg47_pilon exonerate:protein2genome:local exon 1703732 1706184 . + . insertions 33 ; deletions 5 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1703732 1706184 2779 + . alignment_id 0 ; Query GL50803_112828-t26_1-p1 ; Align 1703732 1 198 ; Align 1703936 67 111 ; Align 1704056 104 384 ; Align 1704442 233 105 ; Align 1704547 272 219 ; Align 1704772 345 24 ; Align 1704799 353 42 ; Align 1704844 367 105 ; Align 1704952 402 315 ; Align 1705270 507 915 utg265_pilon exonerate:protein2genome:local gene 711302 867247 2680 - . gene_id 0 ; sequence GL50803_112831-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 866149 867247 . - . utg265_pilon exonerate:protein2genome:local exon 866149 867247 . - . insertions 6 ; deletions 1 utg265_pilon exonerate:protein2genome:local splice5 866147 866148 . - . intron_id 1 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local intron 712120 866148 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 712120 712121 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 711302 712119 . - . utg265_pilon exonerate:protein2genome:local exon 711302 712119 . - . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 711302 867247 2680 - . alignment_id 0 ; Query GL50803_112831-t26_1-p1 ; Align 867248 1 294 ; Align 866951 99 108 ; Align 866843 136 339 ; Align 866501 249 351 ; Align 712118 367 33 ; Align 712082 378 201 ; Align 711878 445 576 utg11_pilon exonerate:protein2genome:local gene 820500 823776 4884 - . gene_id 0 ; sequence GL50803_112846-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 820500 823776 . - . utg11_pilon exonerate:protein2genome:local exon 820500 823776 . - . insertions 0 ; deletions 3 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 820500 823776 4884 - . alignment_id 0 ; Query GL50803_112846-t26_1-p1 ; Align 823777 1 138 ; Align 823638 47 9 ; Align 823629 51 999 ; Align 822630 386 2130 utg64_pilon exonerate:protein2genome:local gene 370073 429411 735 + . gene_id 0 ; sequence GL50803_112866-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 370073 370636 . + . utg64_pilon exonerate:protein2genome:local exon 370073 370636 . + . insertions 0 ; deletions 3 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local splice5 370637 370638 . + . intron_id 1 ; splice_site "GA" utg64_pilon exonerate:protein2genome:local intron 370637 429219 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 429218 429219 . + . intron_id 0 ; splice_site "CC" utg64_pilon exonerate:protein2genome:local cds 429220 429411 . + . utg64_pilon exonerate:protein2genome:local exon 429220 429411 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 370073 429411 735 + . alignment_id 0 ; Query GL50803_112866-t26_1-p1 ; Align 370073 1 45 ; Align 370118 17 228 ; Align 370347 93 3 ; Align 370350 96 285 ; Align 429221 192 123 ; Align 429346 234 66 utg11_pilon exonerate:protein2genome:local gene 909334 1430242 1406 - . gene_id 0 ; sequence GL50803_112867-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1429933 1430242 . - . utg11_pilon exonerate:protein2genome:local exon 1429933 1430242 . - . insertions 9 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local splice5 1429931 1429932 . - . intron_id 1 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 1348166 1429932 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1348166 1348167 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1348030 1348165 . - . utg11_pilon exonerate:protein2genome:local exon 1348030 1348165 . - . insertions 9 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1348028 1348029 . - . intron_id 2 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 1180230 1348029 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 1180230 1180231 . - . intron_id 1 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1180125 1180229 . - . utg11_pilon exonerate:protein2genome:local exon 1180125 1180229 . - . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1180123 1180124 . - . intron_id 3 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1159334 1180124 . - . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 1159334 1159335 . - . intron_id 2 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1159013 1159333 . - . utg11_pilon exonerate:protein2genome:local exon 1159013 1159333 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local splice5 1159011 1159012 . - . intron_id 4 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1065479 1159012 . - . intron_id 4 utg11_pilon exonerate:protein2genome:local splice3 1065479 1065480 . - . intron_id 3 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1065314 1065478 . - . utg11_pilon exonerate:protein2genome:local exon 1065314 1065478 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1065312 1065313 . - . intron_id 5 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1065281 1065313 . - . intron_id 5 utg11_pilon exonerate:protein2genome:local splice3 1065281 1065282 . - . intron_id 4 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1065192 1065280 . - . utg11_pilon exonerate:protein2genome:local exon 1065192 1065280 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local splice5 1065190 1065191 . - . intron_id 6 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 1063402 1065191 . - . intron_id 6 utg11_pilon exonerate:protein2genome:local splice3 1063402 1063403 . - . intron_id 5 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 1063321 1063401 . - . utg11_pilon exonerate:protein2genome:local exon 1063321 1063401 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1063319 1063320 . - . intron_id 7 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 910234 1063320 . - . intron_id 7 utg11_pilon exonerate:protein2genome:local splice3 910234 910235 . - . intron_id 6 ; splice_site "TG" utg11_pilon exonerate:protein2genome:local cds 909334 910233 . - . utg11_pilon exonerate:protein2genome:local exon 909334 910233 . - . insertions 18 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 909334 1430242 1406 - . alignment_id 0 ; Query GL50803_112867-t26_1-p1 ; Align 1430243 46 87 ; Align 1430153 75 15 ; Align 1430132 80 78 ; Align 1430053 106 120 ; Align 1348166 146 51 ; Align 1348109 163 45 ; Align 1348061 178 30 ; Align 1180228 189 57 ; Align 1180165 208 39 ; Align 1159332 222 276 ; Align 1159056 316 42 ; Align 1065477 331 63 ; Align 1065414 353 99 ; Align 1065279 387 33 ; Align 1065246 400 54 ; Align 1063402 418 81 ; Align 910234 445 252 ; Align 909979 529 63 ; Align 909913 550 30 ; Align 909880 560 126 ; Align 909754 603 57 ; Align 909694 622 54 ; Align 909640 641 42 ; Align 909598 656 123 ; Align 909469 697 135 utg11_pilon exonerate:protein2genome:local gene 313140 313505 579 - . gene_id 0 ; sequence GL50803_11287-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 313140 313505 . - . utg11_pilon exonerate:protein2genome:local exon 313140 313505 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 313140 313505 579 - . alignment_id 0 ; Query GL50803_11287-t26_1-p1 ; Align 313506 1 366 utg11_pilon exonerate:protein2genome:local gene 869607 869969 508 - . gene_id 0 ; sequence GL50803_112870-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 869607 869969 . - . utg11_pilon exonerate:protein2genome:local exon 869607 869969 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 869607 869969 508 - . alignment_id 0 ; Query GL50803_112870-t26_1-p1 ; Align 869970 1 363 utg11_pilon exonerate:protein2genome:local gene 877643 885085 8554 + . gene_id 0 ; sequence GL50803_112875-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 877643 883756 . + . utg11_pilon exonerate:protein2genome:local exon 877643 883756 . + . insertions 18 ; deletions 7 utg11_pilon exonerate:protein2genome:local splice5 883757 883758 . + . intron_id 1 ; splice_site "TT" utg11_pilon exonerate:protein2genome:local intron 883757 883786 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 883785 883786 . + . intron_id 0 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 883787 885085 . + . utg11_pilon exonerate:protein2genome:local exon 883787 885085 . + . insertions 24 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 877643 885085 8554 + . alignment_id 0 ; Query GL50803_112875-t26_1-p1 ; Align 877643 1 2973 ; Align 880619 992 1173 ; Align 881792 1388 45 ; Align 881837 1404 537 ; Align 882374 1584 114 ; Align 882494 1622 9 ; Align 882509 1625 822 ; Align 883334 1899 423 ; Align 883787 2040 165 ; Align 883964 2095 159 ; Align 884123 2150 720 ; Align 884852 2390 159 ; Align 885014 2443 72 utg64_pilon exonerate:protein2genome:local gene 514396 514935 848 - . gene_id 0 ; sequence GL50803_112885-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 514396 514935 . - . utg64_pilon exonerate:protein2genome:local exon 514396 514935 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 514396 514935 848 - . alignment_id 0 ; Query GL50803_112885-t26_1-p1 ; Align 514936 1 540 utg64_pilon exonerate:protein2genome:local gene 531762 532478 1086 + . gene_id 0 ; sequence GL50803_112893-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 531762 532478 . + . utg64_pilon exonerate:protein2genome:local exon 531762 532478 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 531762 532478 1086 + . alignment_id 0 ; Query GL50803_112893-t26_1-p1 ; Align 531762 1 717 utg11_pilon exonerate:protein2genome:local gene 315853 317514 2461 - . gene_id 0 ; sequence GL50803_11290-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 315853 317514 . - . utg11_pilon exonerate:protein2genome:local exon 315853 317514 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 315853 317514 2461 - . alignment_id 0 ; Query GL50803_11290-t26_1-p1 ; Align 317515 1 1662 utg99_pilon exonerate:protein2genome:local gene 257199 258707 1940 + . gene_id 0 ; sequence GL50803_112914-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 257199 258707 . + . utg99_pilon exonerate:protein2genome:local exon 257199 258707 . + . insertions 3 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 257199 258707 1940 + . alignment_id 0 ; Query GL50803_112914-t26_1-p1 ; Align 257199 1 657 ; Align 257856 221 651 ; Align 258510 438 198 utg47_pilon exonerate:protein2genome:local gene 1917541 1917639 104 + . gene_id 0 ; sequence GL50803_112915-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1917541 1917639 . + . utg47_pilon exonerate:protein2genome:local exon 1917541 1917639 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1917541 1917639 104 + . alignment_id 0 ; Query GL50803_112915-t26_1-p1 ; Align 1917541 17 99 utg99_pilon exonerate:protein2genome:local gene 301454 302302 1349 + . gene_id 0 ; sequence GL50803_112932-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 301454 302302 . + . utg99_pilon exonerate:protein2genome:local exon 301454 302302 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 301454 302302 1349 + . alignment_id 0 ; Query GL50803_112932-t26_1-p1 ; Align 301454 1 849 utg11_pilon exonerate:protein2genome:local gene 707685 708098 305 - . gene_id 0 ; sequence GL50803_112937-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 707685 708098 . - . utg11_pilon exonerate:protein2genome:local exon 707685 708098 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 707685 708098 305 - . alignment_id 0 ; Query GL50803_112937-t26_1-p1 ; Align 708099 122 414 utg731_pilon exonerate:protein2genome:local gene 482198 482885 305 + . gene_id 0 ; sequence GL50803_112937-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 482198 482416 . + . utg731_pilon exonerate:protein2genome:local exon 482198 482416 . + . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 482417 482418 . + . intron_id 1 ; splice_site "GC" utg731_pilon exonerate:protein2genome:local intron 482417 482630 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 482629 482630 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 482631 482885 . + . utg731_pilon exonerate:protein2genome:local exon 482631 482885 . + . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 482198 482885 305 + . alignment_id 0 ; Query GL50803_112937-t26_1-p1 ; Align 482198 122 75 ; Align 482276 147 54 ; Align 482333 165 84 ; Align 482631 193 177 ; Align 482817 252 69 utg99_pilon exonerate:protein2genome:local gene 257199 258707 1946 + . gene_id 0 ; sequence GL50803_112938-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 257199 258707 . + . utg99_pilon exonerate:protein2genome:local exon 257199 258707 . + . insertions 3 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 257199 258707 1946 + . alignment_id 0 ; Query GL50803_112938-t26_1-p1 ; Align 257199 1 657 ; Align 257856 221 651 ; Align 258510 438 198 utg99_pilon exonerate:protein2genome:local gene 528356 528502 129 - . gene_id 0 ; sequence GL50803_112948-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 528356 528502 . - . utg99_pilon exonerate:protein2genome:local exon 528356 528502 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 528356 528502 129 - . alignment_id 0 ; Query GL50803_112948-t26_1-p1 ; Align 528503 1 147 utg99_pilon exonerate:protein2genome:local gene 521789 521941 142 + . gene_id 0 ; sequence GL50803_112952-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 521789 521941 . + . utg99_pilon exonerate:protein2genome:local exon 521789 521941 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 521789 521941 142 + . alignment_id 0 ; Query GL50803_112952-t26_1-p1 ; Align 521789 5 153 utg11_pilon exonerate:protein2genome:local gene 1616459 1616854 471 - . gene_id 0 ; sequence GL50803_112962-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1616459 1616854 . - . utg11_pilon exonerate:protein2genome:local exon 1616459 1616854 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1616459 1616854 471 - . alignment_id 0 ; Query GL50803_112962-t26_1-p1 ; Align 1616855 1 396 utg308_pilon exonerate:protein2genome:local gene 525569 525718 127 - . gene_id 0 ; sequence GL50803_112966-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 525569 525718 . - . utg308_pilon exonerate:protein2genome:local exon 525569 525718 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 525569 525718 127 - . alignment_id 0 ; Query GL50803_112966-t26_1-p1 ; Align 525719 20 150 utg11_pilon exonerate:protein2genome:local gene 345862 347622 2365 - . gene_id 0 ; sequence GL50803_11297-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 345862 347622 . - . utg11_pilon exonerate:protein2genome:local exon 345862 347622 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 345862 347622 2365 - . alignment_id 0 ; Query GL50803_11297-t26_1-p1 ; Align 347623 1 1761 utg308_pilon exonerate:protein2genome:local gene 550832 555373 6857 + . gene_id 0 ; sequence GL50803_112978-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 550832 555373 . + . utg308_pilon exonerate:protein2genome:local exon 550832 555373 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 550832 555373 6857 + . alignment_id 0 ; Query GL50803_112978-t26_1-p1 ; Align 550832 1132 4542 utg11_pilon exonerate:protein2genome:local gene 347718 348713 1518 - . gene_id 0 ; sequence GL50803_11299-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 347718 348713 . - . utg11_pilon exonerate:protein2genome:local exon 347718 348713 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 347718 348713 1518 - . alignment_id 0 ; Query GL50803_11299-t26_1-p1 ; Align 348714 238 516 ; Align 348198 411 480 utg11_pilon exonerate:protein2genome:local gene 349971 350423 785 - . gene_id 0 ; sequence GL50803_11301-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 349971 350423 . - . utg11_pilon exonerate:protein2genome:local exon 349971 350423 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 349971 350423 785 - . alignment_id 0 ; Query GL50803_11301-t26_1-p1 ; Align 350424 1 453 utg308_pilon exonerate:protein2genome:local gene 424480 428493 5879 + . gene_id 0 ; sequence GL50803_113021-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 424480 428493 . + . utg308_pilon exonerate:protein2genome:local exon 424480 428493 . + . insertions 3 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 424480 428493 5879 + . alignment_id 0 ; Query GL50803_113021-t26_1-p1 ; Align 424480 1 3315 ; Align 427795 1107 327 ; Align 428125 1216 369 utg308_pilon exonerate:protein2genome:local gene 414618 415559 1431 + . gene_id 0 ; sequence GL50803_113023-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 414618 415559 . + . utg308_pilon exonerate:protein2genome:local exon 414618 415559 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 414618 415559 1431 + . alignment_id 0 ; Query GL50803_113023-t26_1-p1 ; Align 414618 1 942 utg11_pilon exonerate:protein2genome:local gene 862500 1019009 1100 + . gene_id 0 ; sequence GL50803_113024-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 862500 863334 . + . utg11_pilon exonerate:protein2genome:local exon 862500 863334 . + . insertions 0 ; deletions 11 utg11_pilon exonerate:protein2genome:local splice5 863335 863336 . + . intron_id 1 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 863335 1018872 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1018871 1018872 . + . intron_id 0 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 1018873 1019009 . + . utg11_pilon exonerate:protein2genome:local exon 1018873 1019009 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 862500 1019009 1100 + . alignment_id 0 ; Query GL50803_113024-t26_1-p1 ; Align 862500 66 30 ; Align 862530 78 24 ; Align 862554 88 306 ; Align 862860 192 237 ; Align 863097 273 141 ; Align 863238 323 96 ; Align 1018875 356 135 utg11_pilon exonerate:protein2genome:local gene 644263 706841 337 - . gene_id 0 ; sequence GL50803_113029-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 706787 706841 . - . utg11_pilon exonerate:protein2genome:local exon 706787 706841 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 706785 706786 . - . intron_id 1 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 648203 706786 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 648203 648204 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 648078 648202 . - . utg11_pilon exonerate:protein2genome:local exon 648078 648202 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 648076 648077 . - . intron_id 2 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 644512 648077 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 644512 644513 . - . intron_id 1 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 644427 644511 . - . utg11_pilon exonerate:protein2genome:local exon 644427 644511 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local splice5 644425 644426 . - . intron_id 3 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 644389 644426 . - . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 644389 644390 . - . intron_id 2 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 644263 644388 . - . utg11_pilon exonerate:protein2genome:local exon 644263 644388 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 644263 706841 337 - . alignment_id 0 ; Query GL50803_113029-t26_1-p1 ; Align 706842 3 54 ; Align 648201 22 123 ; Align 644512 63 48 ; Align 644463 79 36 ; Align 644389 91 126 utg349_pilon exonerate:protein2genome:local gene 954701 1529328 1381 - . gene_id 0 ; sequence GL50803_113030-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1528997 1529328 . - . utg349_pilon exonerate:protein2genome:local exon 1528997 1529328 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1528995 1528996 . - . intron_id 1 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 1383464 1528996 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1383464 1383465 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1383145 1383463 . - . utg349_pilon exonerate:protein2genome:local exon 1383145 1383463 . - . insertions 15 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1383143 1383144 . - . intron_id 2 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local intron 1317501 1383144 . - . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1317501 1317502 . - . intron_id 1 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1317289 1317500 . - . utg349_pilon exonerate:protein2genome:local exon 1317289 1317500 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1317287 1317288 . - . intron_id 3 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1157187 1317288 . - . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 1157187 1157188 . - . intron_id 2 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1157098 1157186 . - . utg349_pilon exonerate:protein2genome:local exon 1157098 1157186 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1157096 1157097 . - . intron_id 4 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local intron 1064843 1157097 . - . intron_id 4 utg349_pilon exonerate:protein2genome:local splice3 1064843 1064844 . - . intron_id 3 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1064738 1064842 . - . utg349_pilon exonerate:protein2genome:local exon 1064738 1064842 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1064736 1064737 . - . intron_id 5 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 955594 1064737 . - . intron_id 5 utg349_pilon exonerate:protein2genome:local splice3 955594 955595 . - . intron_id 4 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 954701 955593 . - . utg349_pilon exonerate:protein2genome:local exon 954701 955593 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 954701 1529328 1381 - . alignment_id 0 ; Query GL50803_113030-t26_1-p1 ; Align 1529329 36 330 ; Align 1383463 147 57 ; Align 1383403 166 39 ; Align 1383355 179 69 ; Align 1383283 202 138 ; Align 1317501 248 210 ; Align 1157186 319 87 ; Align 1064841 349 102 ; Align 955592 384 891 utg47_pilon exonerate:protein2genome:local gene 429041 430762 2670 + . gene_id 0 ; sequence GL50803_113038-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 429041 430762 . + . utg47_pilon exonerate:protein2genome:local exon 429041 430762 . + . insertions 0 ; deletions 1 ; frameshifts 3 utg47_pilon exonerate:protein2genome:local similarity 429041 430762 2670 + . alignment_id 0 ; Query GL50803_113038-t26_1-p1 ; Align 429041 1 1173 ; Align 430215 392 195 ; Align 430412 458 351 utg11_pilon exonerate:protein2genome:local gene 352159 352548 397 - . gene_id 0 ; sequence GL50803_11304-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 352159 352548 . - . utg11_pilon exonerate:protein2genome:local exon 352159 352548 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 352159 352548 397 - . alignment_id 0 ; Query GL50803_11304-t26_1-p1 ; Align 352549 2 390 utg11_pilon exonerate:protein2genome:local gene 352563 353171 804 - . gene_id 0 ; sequence GL50803_11305-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 352563 353171 . - . utg11_pilon exonerate:protein2genome:local exon 352563 353171 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 352563 353171 804 - . alignment_id 0 ; Query GL50803_11305-t26_1-p1 ; Align 353172 1 609 utg11_pilon exonerate:protein2genome:local gene 356216 360216 5708 + . gene_id 0 ; sequence GL50803_11309-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 356216 360216 . + . utg11_pilon exonerate:protein2genome:local exon 356216 360216 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 356216 360216 5708 + . alignment_id 0 ; Query GL50803_11309-t26_1-p1 ; Align 356216 1 2289 ; Align 358507 765 1710 utg349_pilon exonerate:protein2genome:local gene 1371216 1431924 1732 - . gene_id 0 ; sequence GL50803_113093-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1430317 1431924 . - . utg349_pilon exonerate:protein2genome:local exon 1430317 1431924 . - . insertions 12 ; deletions 11 utg349_pilon exonerate:protein2genome:local splice5 1430315 1430316 . - . intron_id 1 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 1371483 1430316 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1371483 1371484 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1371216 1371482 . - . utg349_pilon exonerate:protein2genome:local exon 1371216 1371482 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1371216 1431924 1732 - . alignment_id 0 ; Query GL50803_113093-t26_1-p1 ; Align 1431925 21 321 ; Align 1431604 130 45 ; Align 1431556 145 153 ; Align 1431397 196 108 ; Align 1431286 232 147 ; Align 1431139 283 99 ; Align 1431040 317 75 ; Align 1430965 343 42 ; Align 1430923 358 300 ; Align 1430623 459 102 ; Align 1430521 495 18 ; Align 1430503 502 186 ; Align 1371483 564 66 ; Align 1371414 586 198 utg99_pilon exonerate:protein2genome:local gene 55961 157205 2407 - . gene_id 0 ; sequence GL50803_113094-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 156212 157205 . - . utg99_pilon exonerate:protein2genome:local exon 156212 157205 . - . insertions 15 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 156210 156211 . - . intron_id 1 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local intron 155771 156211 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 155771 155772 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 155256 155770 . - . utg99_pilon exonerate:protein2genome:local exon 155256 155770 . - . insertions 3 ; deletions 3 utg99_pilon exonerate:protein2genome:local splice5 155254 155255 . - . intron_id 2 ; splice_site "GG" utg99_pilon exonerate:protein2genome:local intron 154627 155255 . - . intron_id 2 utg99_pilon exonerate:protein2genome:local splice3 154627 154628 . - . intron_id 1 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 153857 154626 . - . utg99_pilon exonerate:protein2genome:local exon 153857 154626 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 153855 153856 . - . intron_id 3 ; splice_site "GA" utg99_pilon exonerate:protein2genome:local intron 65581 153856 . - . intron_id 3 utg99_pilon exonerate:protein2genome:local splice3 65581 65582 . - . intron_id 2 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 65076 65580 . - . utg99_pilon exonerate:protein2genome:local exon 65076 65580 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 65074 65075 . - . intron_id 4 ; splice_site "TT" utg99_pilon exonerate:protein2genome:local intron 56141 65075 . - . intron_id 4 utg99_pilon exonerate:protein2genome:local splice3 56141 56142 . - . intron_id 3 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 55961 56140 . - . utg99_pilon exonerate:protein2genome:local exon 55961 56140 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 55961 157205 2407 - . alignment_id 0 ; Query GL50803_113094-t26_1-p1 ; Align 157206 74 450 ; Align 156741 224 528 ; Align 155769 401 165 ; Align 155604 459 168 ; Align 155433 515 177 ; Align 154627 574 768 ; Align 65580 831 504 ; Align 56141 999 180 utg64_pilon exonerate:protein2genome:local gene 60186 60359 157 + . gene_id 0 ; sequence GL50803_113106-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 60186 60359 . + . utg64_pilon exonerate:protein2genome:local exon 60186 60359 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 60186 60359 157 + . alignment_id 0 ; Query GL50803_113106-t26_1-p1 ; Align 60186 1 174 utg11_pilon exonerate:protein2genome:local gene 362547 363647 1856 - . gene_id 0 ; sequence GL50803_11311-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 362547 363647 . - . utg11_pilon exonerate:protein2genome:local exon 362547 363647 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 362547 363647 1856 - . alignment_id 0 ; Query GL50803_11311-t26_1-p1 ; Align 363648 1 1101 utg64_pilon exonerate:protein2genome:local gene 127460 127606 194 + . gene_id 0 ; sequence GL50803_113114-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 127460 127606 . + . utg64_pilon exonerate:protein2genome:local exon 127460 127606 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 127460 127606 194 + . alignment_id 0 ; Query GL50803_113114-t26_1-p1 ; Align 127460 2 147 utg11_pilon exonerate:protein2genome:local gene 363679 364116 696 - . gene_id 0 ; sequence GL50803_11312-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 363679 364116 . - . utg11_pilon exonerate:protein2genome:local exon 363679 364116 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 363679 364116 696 - . alignment_id 0 ; Query GL50803_11312-t26_1-p1 ; Align 364117 1 438 utg99_pilon exonerate:protein2genome:local gene 257199 258707 1952 + . gene_id 0 ; sequence GL50803_113130-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 257199 258707 . + . utg99_pilon exonerate:protein2genome:local exon 257199 258707 . + . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 257199 258707 1952 + . alignment_id 0 ; Query GL50803_113130-t26_1-p1 ; Align 257199 1 1308 ; Align 258510 437 198 utg64_pilon exonerate:protein2genome:local gene 166611 169121 3906 + . gene_id 0 ; sequence GL50803_113133-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 166611 169121 . + . utg64_pilon exonerate:protein2genome:local exon 166611 169121 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 166611 169121 3906 + . alignment_id 0 ; Query GL50803_113133-t26_1-p1 ; Align 166611 1 2511 utg64_pilon exonerate:protein2genome:local gene 177651 180455 3115 + . gene_id 0 ; sequence GL50803_113137-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 177651 180455 . + . utg64_pilon exonerate:protein2genome:local exon 177651 180455 . + . insertions 15 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 177651 180455 3115 + . alignment_id 0 ; Query GL50803_113137-t26_1-p1 ; Align 177651 224 123 ; Align 177774 266 126 ; Align 177903 308 1317 ; Align 179223 747 153 ; Align 179385 798 1071 utg64_pilon exonerate:protein2genome:local gene 219903 232520 15645 + . gene_id 0 ; sequence GL50803_113143-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 219903 232520 . + . utg64_pilon exonerate:protein2genome:local exon 219903 232520 . + . insertions 6 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 219903 232520 15645 + . alignment_id 0 ; Query GL50803_113143-t26_1-p1 ; Align 219903 1 3777 ; Align 223680 1261 3441 ; Align 227127 2408 627 ; Align 227754 2618 1350 ; Align 229104 3069 3417 utg18_pilon exonerate:protein2genome:local gene 173832 569516 1670 + . gene_id 0 ; sequence GL50803_113163-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 173832 174000 . + . utg18_pilon exonerate:protein2genome:local exon 173832 174000 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 174001 174002 . + . intron_id 1 ; splice_site "TT" utg18_pilon exonerate:protein2genome:local intron 174001 179367 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 179366 179367 . + . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 179368 179703 . + . utg18_pilon exonerate:protein2genome:local exon 179368 179703 . + . insertions 3 ; deletions 5 utg18_pilon exonerate:protein2genome:local splice5 179704 179705 . + . intron_id 2 ; splice_site "AT" utg18_pilon exonerate:protein2genome:local intron 179704 183262 . + . intron_id 2 utg18_pilon exonerate:protein2genome:local splice3 183261 183262 . + . intron_id 1 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 183263 183532 . + . utg18_pilon exonerate:protein2genome:local exon 183263 183532 . + . insertions 3 ; deletions 1 utg18_pilon exonerate:protein2genome:local splice5 183533 183534 . + . intron_id 3 ; splice_site "GC" utg18_pilon exonerate:protein2genome:local intron 183533 327369 . + . intron_id 3 utg18_pilon exonerate:protein2genome:local splice3 327368 327369 . + . intron_id 2 ; splice_site "GG" utg18_pilon exonerate:protein2genome:local cds 327370 327441 . + . utg18_pilon exonerate:protein2genome:local exon 327370 327441 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 327442 327443 . + . intron_id 4 ; splice_site "GA" utg18_pilon exonerate:protein2genome:local intron 327442 394421 . + . intron_id 4 utg18_pilon exonerate:protein2genome:local splice3 394420 394421 . + . intron_id 3 ; splice_site "TG" utg18_pilon exonerate:protein2genome:local cds 394422 395226 . + . utg18_pilon exonerate:protein2genome:local exon 394422 395226 . + . insertions 9 ; deletions 6 utg18_pilon exonerate:protein2genome:local splice5 395227 395228 . + . intron_id 5 ; splice_site "AC" utg18_pilon exonerate:protein2genome:local intron 395227 569350 . + . intron_id 5 utg18_pilon exonerate:protein2genome:local splice3 569349 569350 . + . intron_id 4 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 569351 569516 . + . utg18_pilon exonerate:protein2genome:local exon 569351 569516 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 173832 569516 1670 + . alignment_id 0 ; Query GL50803_113163-t26_1-p1 ; Align 173832 20 168 ; Align 179370 77 120 ; Align 179490 122 153 ; Align 179646 173 57 ; Align 183265 193 36 ; Align 183301 206 132 ; Align 183436 250 96 ; Align 327372 283 69 ; Align 394424 307 192 ; Align 394619 371 222 ; Align 394844 445 15 ; Align 394859 452 135 ; Align 394994 498 63 ; Align 395060 519 90 ; Align 395150 551 51 ; Align 395201 569 24 ; Align 569352 578 165 utg18_pilon exonerate:protein2genome:local gene 543364 543996 422 + . gene_id 0 ; sequence GL50803_113164-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 543364 543996 . + . utg18_pilon exonerate:protein2genome:local exon 543364 543996 . + . insertions 12 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 543364 543996 422 + . alignment_id 0 ; Query GL50803_113164-t26_1-p1 ; Align 543364 100 246 ; Align 543613 182 9 ; Align 543625 185 117 ; Align 543748 224 249 utg99_pilon exonerate:protein2genome:local gene 257199 258707 1865 + . gene_id 0 ; sequence GL50803_113165-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 257199 258707 . + . utg99_pilon exonerate:protein2genome:local exon 257199 258707 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 257199 258707 1865 + . alignment_id 0 ; Query GL50803_113165-t26_1-p1 ; Align 257199 1 1509 utg349_pilon exonerate:protein2genome:local gene 1398873 1399424 916 - . gene_id 0 ; sequence GL50803_11319-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1398873 1399424 . - . utg349_pilon exonerate:protein2genome:local exon 1398873 1399424 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1398873 1399424 916 - . alignment_id 0 ; Query GL50803_11319-t26_1-p1 ; Align 1399425 1 552 utg349_pilon exonerate:protein2genome:local gene 1625567 1625978 300 + . gene_id 0 ; sequence GL50803_1132-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1625567 1625978 . + . utg349_pilon exonerate:protein2genome:local exon 1625567 1625978 . + . insertions 3 ; deletions 0 ; frameshifts 4 utg349_pilon exonerate:protein2genome:local similarity 1625567 1625978 300 + . alignment_id 0 ; Query GL50803_1132-t26_1-p1 ; Align 1625567 1 333 ; Align 1625907 112 72 utg349_pilon exonerate:protein2genome:local gene 1392733 1397397 7054 - . gene_id 0 ; sequence GL50803_11321-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1393371 1397397 . - . utg349_pilon exonerate:protein2genome:local exon 1393371 1397397 . - . insertions 6 ; deletions 5 utg349_pilon exonerate:protein2genome:local splice5 1393369 1393370 . - . intron_id 1 ; splice_site "CA" utg349_pilon exonerate:protein2genome:local intron 1393341 1393370 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1393341 1393342 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1392733 1393340 . - . utg349_pilon exonerate:protein2genome:local exon 1392733 1393340 . - . insertions 0 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 1392733 1397397 7054 - . alignment_id 0 ; Query GL50803_11321-t26_1-p1 ; Align 1397398 1 471 ; Align 1396927 160 420 ; Align 1396504 300 15 ; Align 1396486 305 474 ; Align 1396012 466 2640 ; Align 1393339 1347 15 ; Align 1393324 1353 60 ; Align 1393264 1376 531 utg11_pilon exonerate:protein2genome:local gene 108357 398120 756 + . gene_id 0 ; sequence GL50803_113211-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 108357 108721 . + . utg11_pilon exonerate:protein2genome:local exon 108357 108721 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 108722 108723 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 108722 220184 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 220183 220184 . + . intron_id 0 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local cds 220185 220303 . + . utg11_pilon exonerate:protein2genome:local exon 220185 220303 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 220304 220305 . + . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 220304 397965 . + . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 397964 397965 . + . intron_id 1 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 397966 398120 . + . utg11_pilon exonerate:protein2genome:local exon 397966 398120 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 108357 398120 756 + . alignment_id 0 ; Query GL50803_113211-t26_1-p1 ; Align 108357 1 57 ; Align 108414 21 306 ; Align 220186 124 18 ; Align 220204 131 99 ; Align 397968 165 153 utg308_pilon exonerate:protein2genome:local gene 182709 187750 6418 - . gene_id 0 ; sequence GL50803_113213-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 182709 187750 . - . utg308_pilon exonerate:protein2genome:local exon 182709 187750 . - . insertions 33 ; deletions 8 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 182709 187750 6418 - . alignment_id 0 ; Query GL50803_113213-t26_1-p1 ; Align 187751 1 1116 ; Align 186634 373 342 ; Align 186292 489 444 ; Align 185848 638 120 ; Align 185727 678 63 ; Align 185661 699 207 ; Align 185454 769 309 ; Align 185145 873 39 ; Align 185103 886 141 ; Align 184962 934 372 ; Align 184590 1059 333 ; Align 184245 1170 213 ; Align 184029 1241 201 ; Align 183828 1309 90 ; Align 183732 1339 69 ; Align 183660 1362 138 ; Align 183519 1408 810 utg47_pilon exonerate:protein2genome:local gene 501783 511359 11823 - . gene_id 0 ; sequence GL50803_113219-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 501783 511359 . - . utg47_pilon exonerate:protein2genome:local exon 501783 511359 . - . insertions 12 ; deletions 2 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 501783 511359 11823 - . alignment_id 0 ; Query GL50803_113219-t26_1-p1 ; Align 511360 1 3045 ; Align 508315 1018 3 ; Align 508311 1019 249 ; Align 508059 1102 2835 ; Align 505215 2047 3432 utg47_pilon exonerate:protein2genome:local gene 1704886 1930457 1099 + . gene_id 0 ; sequence GL50803_113242-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1704886 1705792 . + . utg47_pilon exonerate:protein2genome:local exon 1704886 1705792 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1705793 1705794 . + . intron_id 1 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 1705793 1902712 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1902711 1902712 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1902713 1902788 . + . utg47_pilon exonerate:protein2genome:local exon 1902713 1902788 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1902789 1902790 . + . intron_id 2 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local intron 1902789 1930420 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1930419 1930420 . + . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1930421 1930457 . + . utg47_pilon exonerate:protein2genome:local exon 1930421 1930457 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1704886 1930457 1099 + . alignment_id 0 ; Query GL50803_113242-t26_1-p1 ; Align 1704886 2 63 ; Align 1704952 23 315 ; Align 1705270 128 522 ; Align 1902715 303 72 ; Align 1930422 328 36 utg212_pilon exonerate:protein2genome:local gene 78209 81092 3978 + . gene_id 0 ; sequence GL50803_113252-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 78209 81092 . + . utg212_pilon exonerate:protein2genome:local exon 78209 81092 . + . insertions 3 ; deletions 2 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 78209 81092 3978 + . alignment_id 0 ; Query GL50803_113252-t26_1-p1 ; Align 78209 1 681 ; Align 78891 228 267 ; Align 79158 319 1113 ; Align 80274 690 819 utg212_pilon exonerate:protein2genome:local gene 108936 110184 1718 + . gene_id 0 ; sequence GL50803_113268-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 108936 110184 . + . utg212_pilon exonerate:protein2genome:local exon 108936 110184 . + . insertions 3 ; deletions 2 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 108936 110184 1718 + . alignment_id 0 ; Query GL50803_113268-t26_1-p1 ; Align 108936 1 177 ; Align 109113 61 597 ; Align 109710 261 192 ; Align 109905 325 132 ; Align 110038 369 147 utg64_pilon exonerate:protein2genome:local gene 844642 845166 391 + . gene_id 0 ; sequence GL50803_113269-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 844642 845166 . + . utg64_pilon exonerate:protein2genome:local exon 844642 845166 . + . insertions 0 ; deletions 1 ; frameshifts 6 utg64_pilon exonerate:protein2genome:local similarity 844642 845166 391 + . alignment_id 0 ; Query GL50803_113269-t26_1-p1 ; Align 844642 1 42 ; Align 844684 16 24 ; Align 844710 24 186 ; Align 844900 86 267 utg349_pilon exonerate:protein2genome:local gene 1385945 1387249 1597 + . gene_id 0 ; sequence GL50803_11327-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1385945 1387249 . + . utg349_pilon exonerate:protein2genome:local exon 1385945 1387249 . + . insertions 0 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 1385945 1387249 1597 + . alignment_id 0 ; Query GL50803_11327-t26_1-p1 ; Align 1385945 1 915 ; Align 1386860 310 390 utg99_pilon exonerate:protein2genome:local gene 211003 211140 141 + . gene_id 0 ; sequence GL50803_113273-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 211003 211140 . + . utg99_pilon exonerate:protein2genome:local exon 211003 211140 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 211003 211140 141 + . alignment_id 0 ; Query GL50803_113273-t26_1-p1 ; Align 211003 1 138 utg349_pilon exonerate:protein2genome:local gene 1384242 1385939 2060 + . gene_id 0 ; sequence GL50803_11328-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1384242 1385939 . + . utg349_pilon exonerate:protein2genome:local exon 1384242 1385939 . + . insertions 3 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 1384242 1385939 2060 + . alignment_id 0 ; Query GL50803_11328-t26_1-p1 ; Align 1384242 1 981 ; Align 1385223 329 204 ; Align 1385430 397 228 ; Align 1385658 474 282 utg265_pilon exonerate:protein2genome:local gene 667126 762160 927 - . gene_id 0 ; sequence GL50803_113281-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 761983 762160 . - . utg265_pilon exonerate:protein2genome:local exon 761983 762160 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 761981 761982 . - . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 667798 761982 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 667798 667799 . - . intron_id 0 ; splice_site "TG" utg265_pilon exonerate:protein2genome:local cds 667126 667797 . - . utg265_pilon exonerate:protein2genome:local exon 667126 667797 . - . insertions 0 ; deletions 0 ; frameshifts 4 utg265_pilon exonerate:protein2genome:local similarity 667126 762160 927 - . alignment_id 0 ; Query GL50803_113281-t26_1-p1 ; Align 762161 19 177 ; Align 667796 79 60 ; Align 667732 99 606 utg265_pilon exonerate:protein2genome:local gene 383682 713605 415 - . gene_id 0 ; sequence GL50803_113282-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 713568 713605 . - . utg265_pilon exonerate:protein2genome:local exon 713568 713605 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 713566 713567 . - . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 695411 713567 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 695411 695412 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 695293 695410 . - . utg265_pilon exonerate:protein2genome:local exon 695293 695410 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 695291 695292 . - . intron_id 2 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 667730 695292 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 667730 667731 . - . intron_id 1 ; splice_site "AA" utg265_pilon exonerate:protein2genome:local cds 667063 667729 . - . utg265_pilon exonerate:protein2genome:local exon 667063 667729 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local splice5 667061 667062 . - . intron_id 3 ; splice_site "GC" utg265_pilon exonerate:protein2genome:local intron 667014 667062 . - . intron_id 3 utg265_pilon exonerate:protein2genome:local splice3 667014 667015 . - . intron_id 2 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 666982 667013 . - . utg265_pilon exonerate:protein2genome:local exon 666982 667013 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 666980 666981 . - . intron_id 4 ; splice_site "TT" utg265_pilon exonerate:protein2genome:local intron 558877 666981 . - . intron_id 4 utg265_pilon exonerate:protein2genome:local splice3 558877 558878 . - . intron_id 3 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 558742 558876 . - . utg265_pilon exonerate:protein2genome:local exon 558742 558876 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 558740 558741 . - . intron_id 5 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local intron 383749 558741 . - . intron_id 5 utg265_pilon exonerate:protein2genome:local splice3 383749 383750 . - . intron_id 4 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 383682 383748 . - . utg265_pilon exonerate:protein2genome:local exon 383682 383748 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 383682 713605 415 - . alignment_id 0 ; Query GL50803_113282-t26_1-p1 ; Align 713606 75 36 ; Align 695410 88 117 ; Align 667730 127 600 ; Align 667129 327 66 ; Align 667014 349 30 ; Align 558876 360 132 ; Align 383748 405 66 utg265_pilon exonerate:protein2genome:local gene 664806 665640 595 - . gene_id 0 ; sequence GL50803_113283-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 665320 665640 . - . utg265_pilon exonerate:protein2genome:local exon 665320 665640 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local splice5 665318 665319 . - . intron_id 1 ; splice_site "AC" utg265_pilon exonerate:protein2genome:local intron 665211 665319 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 665211 665212 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 664806 665210 . - . utg265_pilon exonerate:protein2genome:local exon 664806 665210 . - . insertions 12 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 664806 665640 595 - . alignment_id 0 ; Query GL50803_113283-t26_1-p1 ; Align 665641 1 186 ; Align 665453 63 132 ; Align 665209 108 33 ; Align 665175 119 111 ; Align 665058 156 105 ; Align 664950 191 66 ; Align 664881 213 75 utg265_pilon exonerate:protein2genome:local gene 663997 664752 1201 + . gene_id 0 ; sequence GL50803_113284-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 663997 664752 . + . utg265_pilon exonerate:protein2genome:local exon 663997 664752 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 663997 664752 1201 + . alignment_id 0 ; Query GL50803_113284-t26_1-p1 ; Align 663997 1 756 utg308_pilon exonerate:protein2genome:local gene 827270 827719 542 + . gene_id 0 ; sequence GL50803_113285-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 827270 827719 . + . utg308_pilon exonerate:protein2genome:local exon 827270 827719 . + . insertions 0 ; deletions 0 ; frameshifts 3 utg308_pilon exonerate:protein2genome:local similarity 827270 827719 542 + . alignment_id 0 ; Query GL50803_113285-t26_1-p1 ; Align 827270 42 102 ; Align 827374 76 303 ; Align 827678 177 42 utg308_pilon exonerate:protein2genome:local gene 827087 827257 168 + . gene_id 0 ; sequence GL50803_113286-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 827087 827257 . + . utg308_pilon exonerate:protein2genome:local exon 827087 827257 . + . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 827087 827257 168 + . alignment_id 0 ; Query GL50803_113286-t26_1-p1 ; Align 827087 1 120 ; Align 827210 41 48 utg731_pilon exonerate:protein2genome:local gene 69938 70108 168 + . gene_id 0 ; sequence GL50803_113286-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 69938 70108 . + . utg731_pilon exonerate:protein2genome:local exon 69938 70108 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 69938 70108 168 + . alignment_id 0 ; Query GL50803_113286-t26_1-p1 ; Align 69938 1 120 ; Align 70061 41 48 utg99_pilon exonerate:protein2genome:local gene 171420 171557 118 + . gene_id 0 ; sequence GL50803_113290-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 171420 171557 . + . utg99_pilon exonerate:protein2genome:local exon 171420 171557 . + . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 171420 171557 118 + . alignment_id 0 ; Query GL50803_113290-t26_1-p1 ; Align 171420 6 24 ; Align 171444 15 114 utg11_pilon exonerate:protein2genome:local gene 534623 537091 2713 + . gene_id 0 ; sequence GL50803_113297-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 534623 537091 . + . utg11_pilon exonerate:protein2genome:local exon 534623 537091 . + . insertions 30 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 534623 537091 2713 + . alignment_id 0 ; Query GL50803_113297-t26_1-p1 ; Align 534623 1 630 ; Align 535256 211 249 ; Align 535511 294 51 ; Align 535565 311 270 ; Align 535844 401 27 ; Align 535877 410 480 ; Align 536360 570 732 utg731_pilon exonerate:protein2genome:local gene 343238 345652 3328 - . gene_id 0 ; sequence GL50803_113303-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 343238 345652 . - . utg731_pilon exonerate:protein2genome:local exon 343238 345652 . - . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 343238 345652 3328 - . alignment_id 0 ; Query GL50803_113303-t26_1-p1 ; Align 345653 1 879 ; Align 344771 294 912 ; Align 343853 598 615 utg349_pilon exonerate:protein2genome:local gene 1102857 1435690 1645 + . gene_id 0 ; sequence GL50803_113304-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1102857 1103310 . + . utg349_pilon exonerate:protein2genome:local exon 1102857 1103310 . + . insertions 3 ; deletions 2 utg349_pilon exonerate:protein2genome:local splice5 1103311 1103312 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1103311 1236907 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1236906 1236907 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1236908 1237022 . + . utg349_pilon exonerate:protein2genome:local exon 1236908 1237022 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1237023 1237024 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1237023 1433141 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1433140 1433141 . + . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 1433142 1433407 . + . utg349_pilon exonerate:protein2genome:local exon 1433142 1433407 . + . insertions 6 ; deletions 2 utg349_pilon exonerate:protein2genome:local splice5 1433408 1433409 . + . intron_id 3 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1433408 1434650 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 1434649 1434650 . + . intron_id 2 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1434651 1435690 . + . utg349_pilon exonerate:protein2genome:local exon 1434651 1435690 . + . insertions 3 ; deletions 9 utg349_pilon exonerate:protein2genome:local similarity 1102857 1435690 1645 + . alignment_id 0 ; Query GL50803_113304-t26_1-p1 ; Align 1102857 3 225 ; Align 1103085 78 114 ; Align 1103199 118 111 ; Align 1236910 156 111 ; Align 1433143 194 93 ; Align 1433236 227 72 ; Align 1433311 251 72 ; Align 1433386 275 21 ; Align 1434653 283 51 ; Align 1434704 301 102 ; Align 1434806 336 354 ; Align 1435160 456 201 ; Align 1435364 523 144 ; Align 1435508 572 63 ; Align 1435571 597 120 utg47_pilon exonerate:protein2genome:local gene 1373367 1380950 10278 + . gene_id 0 ; sequence GL50803_113319-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1373367 1380950 . + . utg47_pilon exonerate:protein2genome:local exon 1373367 1380950 . + . insertions 15 ; deletions 10 ; frameshifts 12 utg47_pilon exonerate:protein2genome:local similarity 1373367 1380950 10278 + . alignment_id 0 ; Query GL50803_113319-t26_1-p1 ; Align 1373367 1 372 ; Align 1373741 125 9 ; Align 1373750 129 2022 ; Align 1375774 804 594 ; Align 1376369 1002 366 ; Align 1376741 1124 336 ; Align 1377080 1236 219 ; Align 1377301 1309 330 ; Align 1377637 1419 99 ; Align 1377736 1453 1272 ; Align 1379008 1880 687 ; Align 1379695 2110 3 ; Align 1379700 2111 81 ; Align 1379781 2139 336 ; Align 1380118 2251 3 ; Align 1380121 2253 492 ; Align 1380615 2418 336 utg11_pilon exonerate:protein2genome:local gene 162041 162214 188 + . gene_id 0 ; sequence GL50803_113327-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 162041 162214 . + . utg11_pilon exonerate:protein2genome:local exon 162041 162214 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 162041 162214 188 + . alignment_id 0 ; Query GL50803_113327-t26_1-p1 ; Align 162041 1 174 utg11_pilon exonerate:protein2genome:local gene 21511 653115 1244 - . gene_id 0 ; sequence GL50803_113357-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 652683 653115 . - . utg11_pilon exonerate:protein2genome:local exon 652683 653115 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 652681 652682 . - . intron_id 1 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 477812 652682 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 477812 477813 . - . intron_id 0 ; splice_site "TG" utg11_pilon exonerate:protein2genome:local cds 477730 477811 . - . utg11_pilon exonerate:protein2genome:local exon 477730 477811 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 477728 477729 . - . intron_id 2 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 331285 477729 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 331285 331286 . - . intron_id 1 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local cds 331024 331284 . - . utg11_pilon exonerate:protein2genome:local exon 331024 331284 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 331022 331023 . - . intron_id 3 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local intron 271806 331023 . - . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 271806 271807 . - . intron_id 2 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 271647 271805 . - . utg11_pilon exonerate:protein2genome:local exon 271647 271805 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 271645 271646 . - . intron_id 4 ; splice_site "TT" utg11_pilon exonerate:protein2genome:local intron 105574 271646 . - . intron_id 4 utg11_pilon exonerate:protein2genome:local splice3 105574 105575 . - . intron_id 3 ; splice_site "TG" utg11_pilon exonerate:protein2genome:local cds 105400 105573 . - . utg11_pilon exonerate:protein2genome:local exon 105400 105573 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 105398 105399 . - . intron_id 5 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 89712 105399 . - . intron_id 5 utg11_pilon exonerate:protein2genome:local splice3 89712 89713 . - . intron_id 4 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 89300 89711 . - . utg11_pilon exonerate:protein2genome:local exon 89300 89711 . - . insertions 3 ; deletions 3 utg11_pilon exonerate:protein2genome:local splice5 89298 89299 . - . intron_id 6 ; splice_site "CC" utg11_pilon exonerate:protein2genome:local intron 21652 89299 . - . intron_id 6 utg11_pilon exonerate:protein2genome:local splice3 21652 21653 . - . intron_id 5 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 21511 21651 . - . utg11_pilon exonerate:protein2genome:local exon 21511 21651 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 21511 653115 1244 - . alignment_id 0 ; Query GL50803_113357-t26_1-p1 ; Align 653116 64 432 ; Align 477810 209 78 ; Align 331284 236 183 ; Align 331101 298 75 ; Align 271805 324 156 ; Align 105573 377 171 ; Align 89711 435 12 ; Align 89699 440 93 ; Align 89606 472 111 ; Align 89492 509 117 ; Align 89375 549 75 ; Align 21652 574 141 utg11_pilon exonerate:protein2genome:local gene 61859 67726 7831 - . gene_id 0 ; sequence GL50803_113365-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 61859 67726 . - . utg11_pilon exonerate:protein2genome:local exon 61859 67726 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 61859 67726 7831 - . alignment_id 0 ; Query GL50803_113365-t26_1-p1 ; Align 67727 1 5868 utg349_pilon exonerate:protein2genome:local gene 1356683 1356919 349 - . gene_id 0 ; sequence GL50803_11341-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1356683 1356919 . - . utg349_pilon exonerate:protein2genome:local exon 1356683 1356919 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1356683 1356919 349 - . alignment_id 0 ; Query GL50803_11341-t26_1-p1 ; Align 1356920 1 237 utg349_pilon exonerate:protein2genome:local gene 408727 409575 1090 + . gene_id 0 ; sequence GL50803_113415-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 408727 409575 . + . utg349_pilon exonerate:protein2genome:local exon 408727 409575 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 408727 409575 1090 + . alignment_id 0 ; Query GL50803_113415-t26_1-p1 ; Align 408727 1 414 ; Align 409144 139 432 utg349_pilon exonerate:protein2genome:local gene 409636 417258 10583 - . gene_id 0 ; sequence GL50803_113416-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 410565 417258 . - . utg349_pilon exonerate:protein2genome:local exon 410565 417258 . - . insertions 12 ; deletions 1 ; frameshifts 3 utg349_pilon exonerate:protein2genome:local splice5 410563 410564 . - . intron_id 1 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 410502 410564 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 410502 410503 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 409636 410501 . - . utg349_pilon exonerate:protein2genome:local exon 409636 410501 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 409636 417258 10583 - . alignment_id 0 ; Query GL50803_113416-t26_1-p1 ; Align 417259 1 519 ; Align 416737 174 2961 ; Align 413775 1161 246 ; Align 413526 1243 360 ; Align 413164 1363 189 ; Align 412969 1426 99 ; Align 412870 1460 2304 ; Align 410500 2229 864 utg349_pilon exonerate:protein2genome:local gene 1356260 1356634 602 - . gene_id 0 ; sequence GL50803_11342-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1356260 1356634 . - . utg349_pilon exonerate:protein2genome:local exon 1356260 1356634 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1356260 1356634 602 - . alignment_id 0 ; Query GL50803_11342-t26_1-p1 ; Align 1356635 1 375 utg18_pilon exonerate:protein2genome:local gene 543372 544667 1199 - . gene_id 0 ; sequence GL50803_113433-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 543372 544667 . - . utg18_pilon exonerate:protein2genome:local exon 543372 544667 . - . insertions 15 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 543372 544667 1199 - . alignment_id 0 ; Query GL50803_113433-t26_1-p1 ; Align 544668 22 27 ; Align 544638 31 894 ; Align 543738 329 114 ; Align 543618 367 246 utg349_pilon exonerate:protein2genome:local gene 82102 230492 2068 - . gene_id 0 ; sequence GL50803_113439-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 230049 230492 . - . utg349_pilon exonerate:protein2genome:local exon 230049 230492 . - . insertions 3 ; deletions 4 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local splice5 230047 230048 . - . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 229932 230048 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 229932 229933 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 229517 229931 . - . utg349_pilon exonerate:protein2genome:local exon 229517 229931 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 229515 229516 . - . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 87796 229516 . - . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 87796 87797 . - . intron_id 1 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 86722 87795 . - . utg349_pilon exonerate:protein2genome:local exon 86722 87795 . - . insertions 9 ; deletions 3 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local splice5 86720 86721 . - . intron_id 3 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 82227 86721 . - . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 82227 82228 . - . intron_id 2 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 82102 82226 . - . utg349_pilon exonerate:protein2genome:local exon 82102 82226 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 82102 230492 2068 - . alignment_id 0 ; Query GL50803_113439-t26_1-p1 ; Align 230493 40 138 ; Align 230355 90 72 ; Align 230281 114 144 ; Align 230134 162 84 ; Align 229930 191 348 ; Align 229582 308 63 ; Align 87795 330 159 ; Align 87635 383 54 ; Align 87581 404 504 ; Align 87074 572 123 ; Align 86945 613 222 ; Align 82222 688 120 utg11_pilon exonerate:protein2genome:local gene 1178709 1798109 2015 - . gene_id 0 ; sequence GL50803_113450-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1797544 1798109 . - . utg11_pilon exonerate:protein2genome:local exon 1797544 1798109 . - . insertions 6 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1797542 1797543 . - . intron_id 1 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 1631230 1797543 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1631230 1631231 . - . intron_id 0 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 1631036 1631229 . - . utg11_pilon exonerate:protein2genome:local exon 1631036 1631229 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local splice5 1631034 1631035 . - . intron_id 2 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 1629894 1631035 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 1629894 1629895 . - . intron_id 1 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1629799 1629893 . - . utg11_pilon exonerate:protein2genome:local exon 1629799 1629893 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1629797 1629798 . - . intron_id 3 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 1543738 1629798 . - . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 1543738 1543739 . - . intron_id 2 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1543646 1543737 . - . utg11_pilon exonerate:protein2genome:local exon 1543646 1543737 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1543644 1543645 . - . intron_id 4 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1347366 1543645 . - . intron_id 4 utg11_pilon exonerate:protein2genome:local splice3 1347366 1347367 . - . intron_id 3 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 1346360 1347365 . - . utg11_pilon exonerate:protein2genome:local exon 1346360 1347365 . - . insertions 3 ; deletions 5 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local splice5 1346358 1346359 . - . intron_id 5 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 1178833 1346359 . - . intron_id 5 utg11_pilon exonerate:protein2genome:local splice3 1178833 1178834 . - . intron_id 4 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local cds 1178709 1178832 . - . utg11_pilon exonerate:protein2genome:local exon 1178709 1178832 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1178709 1798109 2015 - . alignment_id 0 ; Query GL50803_113450-t26_1-p1 ; Align 1798110 36 108 ; Align 1797999 72 177 ; Align 1797822 132 249 ; Align 1797570 215 24 ; Align 1631229 224 63 ; Align 1631166 246 72 ; Align 1631094 271 57 ; Align 1629892 291 93 ; Align 1543738 322 90 ; Align 1347365 353 18 ; Align 1347346 359 132 ; Align 1347214 406 636 ; Align 1346578 619 54 ; Align 1346524 638 69 ; Align 1346452 661 90 ; Align 1178832 692 123 utg349_pilon exonerate:protein2genome:local gene 585818 585979 198 + . gene_id 0 ; sequence GL50803_113454-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 585818 585979 . + . utg349_pilon exonerate:protein2genome:local exon 585818 585979 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 585818 585979 198 + . alignment_id 0 ; Query GL50803_113454-t26_1-p1 ; Align 585818 1 162 utg349_pilon exonerate:protein2genome:local gene 587639 593893 8433 + . gene_id 0 ; sequence GL50803_113456-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 587639 593893 . + . utg349_pilon exonerate:protein2genome:local exon 587639 593893 . + . insertions 9 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 587639 593893 8433 + . alignment_id 0 ; Query GL50803_113456-t26_1-p1 ; Align 587639 1 1089 ; Align 588734 364 3282 ; Align 592016 1459 258 ; Align 592274 1550 582 ; Align 592859 1744 1035 utg731_pilon exonerate:protein2genome:local gene 338550 338858 253 + . gene_id 0 ; sequence GL50803_113470-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 338550 338858 . + . utg731_pilon exonerate:protein2genome:local exon 338550 338858 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 338550 338858 253 + . alignment_id 0 ; Query GL50803_113470-t26_1-p1 ; Align 338550 1 309 utg731_pilon exonerate:protein2genome:local gene 332834 333142 253 - . gene_id 0 ; sequence GL50803_113470-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 332834 333142 . - . utg731_pilon exonerate:protein2genome:local exon 332834 333142 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 332834 333142 253 - . alignment_id 0 ; Query GL50803_113470-t26_1-p1 ; Align 333143 1 309 utg731_pilon exonerate:protein2genome:local gene 300297 304082 5031 - . gene_id 0 ; sequence GL50803_113480-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 300297 304082 . - . utg731_pilon exonerate:protein2genome:local exon 300297 304082 . - . insertions 3 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 300297 304082 5031 - . alignment_id 0 ; Query GL50803_113480-t26_1-p1 ; Align 304083 1 2181 ; Align 301902 729 216 ; Align 301683 801 927 ; Align 300756 1114 459 utg212_pilon exonerate:protein2genome:local gene 14039 115880 641 + . gene_id 0 ; sequence GL50803_113491-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14039 14426 . + . utg212_pilon exonerate:protein2genome:local exon 14039 14426 . + . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local splice5 14427 14428 . + . intron_id 1 ; splice_site "AC" utg212_pilon exonerate:protein2genome:local intron 14427 115722 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115721 115722 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115723 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115723 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14039 115880 641 + . alignment_id 0 ; Query GL50803_113491-t26_1-p1 ; Align 14039 1 66 ; Align 14105 24 321 ; Align 115725 132 156 utg349_pilon exonerate:protein2genome:local gene 130163 170487 1769 + . gene_id 0 ; sequence GL50803_113512-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 130163 130715 . + . utg349_pilon exonerate:protein2genome:local exon 130163 130715 . + . insertions 12 ; deletions 2 utg349_pilon exonerate:protein2genome:local splice5 130716 130717 . + . intron_id 1 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local intron 130716 168493 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 168492 168493 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 168494 168709 . + . utg349_pilon exonerate:protein2genome:local exon 168494 168709 . + . insertions 3 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 168710 168711 . + . intron_id 2 ; splice_site "GA" utg349_pilon exonerate:protein2genome:local intron 168710 169174 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 169173 169174 . + . intron_id 1 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 169175 169330 . + . utg349_pilon exonerate:protein2genome:local exon 169175 169330 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 169331 169332 . + . intron_id 3 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 169331 169612 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 169611 169612 . + . intron_id 2 ; splice_site "TG" utg349_pilon exonerate:protein2genome:local cds 169613 170487 . + . utg349_pilon exonerate:protein2genome:local exon 169613 170487 . + . insertions 15 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 130163 170487 1769 + . alignment_id 0 ; Query GL50803_113512-t26_1-p1 ; Align 130163 1 228 ; Align 130397 77 30 ; Align 130433 87 183 ; Align 130616 149 63 ; Align 130679 171 36 ; Align 168496 184 66 ; Align 168565 206 60 ; Align 168625 227 84 ; Align 169177 256 153 ; Align 169615 308 321 ; Align 169939 415 12 ; Align 169954 419 384 ; Align 170347 547 141 utg731_pilon exonerate:protein2genome:local gene 1217957 1220530 3388 + . gene_id 0 ; sequence GL50803_113522-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1217957 1220530 . + . utg731_pilon exonerate:protein2genome:local exon 1217957 1220530 . + . insertions 6 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1217957 1220530 3388 + . alignment_id 0 ; Query GL50803_113522-t26_1-p1 ; Align 1217957 652 147 ; Align 1218104 702 273 ; Align 1218377 794 60 ; Align 1218443 814 1308 ; Align 1219751 1251 780 utg349_pilon exonerate:protein2genome:local gene 1561083 1566148 6176 - . gene_id 0 ; sequence GL50803_113531-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1561083 1566148 . - . utg349_pilon exonerate:protein2genome:local exon 1561083 1566148 . - . insertions 39 ; deletions 12 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 1561083 1566148 6176 - . alignment_id 0 ; Query GL50803_113531-t26_1-p1 ; Align 1566149 1 174 ; Align 1565975 60 177 ; Align 1565798 120 414 ; Align 1565381 258 198 ; Align 1565180 324 318 ; Align 1564862 431 162 ; Align 1564700 490 33 ; Align 1564667 502 315 ; Align 1564343 607 243 ; Align 1564097 688 54 ; Align 1564040 706 423 ; Align 1563611 847 78 ; Align 1563533 874 342 ; Align 1563190 988 135 ; Align 1563054 1033 90 ; Align 1562964 1064 333 ; Align 1562628 1175 210 ; Align 1562415 1245 207 ; Align 1562208 1315 84 ; Align 1562118 1343 1035 utg11_pilon exonerate:protein2genome:local gene 1673587 1674429 1329 + . gene_id 0 ; sequence GL50803_11354-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1673587 1674429 . + . utg11_pilon exonerate:protein2genome:local exon 1673587 1674429 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1673587 1674429 1329 + . alignment_id 0 ; Query GL50803_11354-t26_1-p1 ; Align 1673587 1 843 utg11_pilon exonerate:protein2genome:local gene 1669311 1673495 5191 - . gene_id 0 ; sequence GL50803_11355-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1669311 1673495 . - . utg11_pilon exonerate:protein2genome:local exon 1669311 1673495 . - . insertions 0 ; deletions 7 utg11_pilon exonerate:protein2genome:local similarity 1669311 1673495 5191 - . alignment_id 0 ; Query GL50803_11355-t26_1-p1 ; Align 1673496 7 843 ; Align 1672653 290 24 ; Align 1672629 302 51 ; Align 1672578 320 3267 utg731_pilon exonerate:protein2genome:local gene 1510399 1512348 3176 + . gene_id 0 ; sequence GL50803_113553-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1510399 1512348 . + . utg731_pilon exonerate:protein2genome:local exon 1510399 1512348 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1510399 1512348 3176 + . alignment_id 0 ; Query GL50803_113553-t26_1-p1 ; Align 1510399 1 1950 utg731_pilon exonerate:protein2genome:local gene 1513289 1514628 2159 - . gene_id 0 ; sequence GL50803_113554-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1513289 1514628 . - . utg731_pilon exonerate:protein2genome:local exon 1513289 1514628 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 1513289 1514628 2159 - . alignment_id 0 ; Query GL50803_113554-t26_1-p1 ; Align 1514629 1 87 ; Align 1514540 31 1251 utg11_pilon exonerate:protein2genome:local gene 1668780 1669265 551 + . gene_id 0 ; sequence GL50803_11356-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1668780 1669265 . + . utg11_pilon exonerate:protein2genome:local exon 1668780 1669265 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1668780 1669265 551 + . alignment_id 0 ; Query GL50803_11356-t26_1-p1 ; Align 1668780 13 486 utg731_pilon exonerate:protein2genome:local gene 1538269 1541469 4202 - . gene_id 0 ; sequence GL50803_113565-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1538269 1541469 . - . utg731_pilon exonerate:protein2genome:local exon 1538269 1541469 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1538269 1541469 4202 - . alignment_id 0 ; Query GL50803_113565-t26_1-p1 ; Align 1541470 1 3201 utg731_pilon exonerate:protein2genome:local gene 1547319 1547465 107 + . gene_id 0 ; sequence GL50803_113567-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1547319 1547465 . + . utg731_pilon exonerate:protein2genome:local exon 1547319 1547465 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1547319 1547465 107 + . alignment_id 0 ; Query GL50803_113567-t26_1-p1 ; Align 1547319 1 147 utg11_pilon exonerate:protein2genome:local gene 1667739 1668530 1347 + . gene_id 0 ; sequence GL50803_11359-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1667739 1668530 . + . utg11_pilon exonerate:protein2genome:local exon 1667739 1668530 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1667739 1668530 1347 + . alignment_id 0 ; Query GL50803_11359-t26_1-p1 ; Align 1667739 1 792 utg731_pilon exonerate:protein2genome:local gene 1443380 1448746 6865 + . gene_id 0 ; sequence GL50803_113592-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1443380 1448746 . + . utg731_pilon exonerate:protein2genome:local exon 1443380 1448746 . + . insertions 0 ; deletions 9 utg731_pilon exonerate:protein2genome:local similarity 1443380 1448746 6865 + . alignment_id 0 ; Query GL50803_113592-t26_1-p1 ; Align 1443380 1 312 ; Align 1443692 107 282 ; Align 1443974 204 606 ; Align 1444580 407 171 ; Align 1444751 465 690 ; Align 1445441 696 1827 ; Align 1447268 1306 1479 utg64_pilon exonerate:protein2genome:local gene 663576 666299 3444 - . gene_id 0 ; sequence GL50803_113603-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 663576 666299 . - . utg64_pilon exonerate:protein2genome:local exon 663576 666299 . - . insertions 0 ; deletions 6 utg64_pilon exonerate:protein2genome:local similarity 663576 666299 3444 - . alignment_id 0 ; Query GL50803_113603-t26_1-p1 ; Align 666300 1 912 ; Align 665388 306 1623 ; Align 663765 852 189 utg64_pilon exonerate:protein2genome:local gene 679447 680805 1826 - . gene_id 0 ; sequence GL50803_113610-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 679447 680805 . - . utg64_pilon exonerate:protein2genome:local exon 679447 680805 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 679447 680805 1826 - . alignment_id 0 ; Query GL50803_113610-t26_1-p1 ; Align 680806 1 543 ; Align 680263 183 816 utg64_pilon exonerate:protein2genome:local gene 694033 695328 1406 - . gene_id 0 ; sequence GL50803_113616-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 694033 695328 . - . utg64_pilon exonerate:protein2genome:local exon 694033 695328 . - . insertions 0 ; deletions 9 utg64_pilon exonerate:protein2genome:local similarity 694033 695328 1406 - . alignment_id 0 ; Query GL50803_113616-t26_1-p1 ; Align 695329 1 360 ; Align 694969 125 60 ; Align 694909 148 735 ; Align 694174 395 141 utg64_pilon exonerate:protein2genome:local gene 708369 712880 6306 - . gene_id 0 ; sequence GL50803_113622-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 708369 712880 . - . utg64_pilon exonerate:protein2genome:local exon 708369 712880 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 708369 712880 6306 - . alignment_id 0 ; Query GL50803_113622-t26_1-p1 ; Align 712881 1 4512 utg64_pilon exonerate:protein2genome:local gene 716075 716224 158 + . gene_id 0 ; sequence GL50803_113623-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 716075 716224 . + . utg64_pilon exonerate:protein2genome:local exon 716075 716224 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 716075 716224 158 + . alignment_id 0 ; Query GL50803_113623-t26_1-p1 ; Align 716075 2 150 utg64_pilon exonerate:protein2genome:local gene 722813 728493 7891 + . gene_id 0 ; sequence GL50803_113625-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 722813 728493 . + . utg64_pilon exonerate:protein2genome:local exon 722813 728493 . + . insertions 0 ; deletions 11 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 722813 728493 7891 + . alignment_id 0 ; Query GL50803_113625-t26_1-p1 ; Align 722813 1 645 ; Align 723458 219 1797 ; Align 725255 821 21 ; Align 725276 829 312 ; Align 725588 936 285 ; Align 725874 1031 384 ; Align 726258 1160 1482 ; Align 727741 1654 753 utg11_pilon exonerate:protein2genome:local gene 1662062 1663039 1202 - . gene_id 0 ; sequence GL50803_11363-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1662062 1663039 . - . utg11_pilon exonerate:protein2genome:local exon 1662062 1663039 . - . insertions 12 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1662062 1663039 1202 - . alignment_id 0 ; Query GL50803_11363-t26_1-p1 ; Align 1663040 1 825 ; Align 1662203 276 141 utg11_pilon exonerate:protein2genome:local gene 1660232 1661989 2929 + . gene_id 0 ; sequence GL50803_11364-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1660232 1661989 . + . utg11_pilon exonerate:protein2genome:local exon 1660232 1661989 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1660232 1661989 2929 + . alignment_id 0 ; Query GL50803_11364-t26_1-p1 ; Align 1660232 1 438 ; Align 1660673 147 1317 utg731_pilon exonerate:protein2genome:local gene 1269586 1271265 2207 - . gene_id 0 ; sequence GL50803_113655-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1269586 1271265 . - . utg731_pilon exonerate:protein2genome:local exon 1269586 1271265 . - . insertions 3 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1269586 1271265 2207 - . alignment_id 0 ; Query GL50803_113655-t26_1-p1 ; Align 1271266 1 450 ; Align 1270816 152 507 ; Align 1270306 321 720 utg349_pilon exonerate:protein2genome:local gene 964367 966292 2673 - . gene_id 0 ; sequence GL50803_113656-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 964367 966292 . - . utg349_pilon exonerate:protein2genome:local exon 964367 966292 . - . insertions 15 ; deletions 0 ; frameshifts 3 utg349_pilon exonerate:protein2genome:local similarity 964367 966292 2673 - . alignment_id 0 ; Query GL50803_113656-t26_1-p1 ; Align 966293 1 126 ; Align 966165 43 171 ; Align 965991 100 207 ; Align 965783 169 240 ; Align 965540 249 345 ; Align 965192 364 42 ; Align 965147 378 201 ; Align 964943 445 576 utg731_pilon exonerate:protein2genome:local gene 1245916 1247655 2695 + . gene_id 0 ; sequence GL50803_113662-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1245916 1247655 . + . utg731_pilon exonerate:protein2genome:local exon 1245916 1247655 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1245916 1247655 2695 + . alignment_id 0 ; Query GL50803_113662-t26_1-p1 ; Align 1245916 1 1740 utg99_pilon exonerate:protein2genome:local gene 11904 15302 5042 - . gene_id 0 ; sequence GL50803_113673-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 11904 15302 . - . utg99_pilon exonerate:protein2genome:local exon 11904 15302 . - . insertions 6 ; deletions 2 ; frameshifts 6 utg99_pilon exonerate:protein2genome:local similarity 11904 15302 5042 - . alignment_id 0 ; Query GL50803_113673-t26_1-p1 ; Align 15303 2 429 ; Align 14872 145 669 ; Align 14201 368 3 ; Align 14198 370 603 ; Align 13592 571 891 ; Align 12698 868 636 ; Align 12060 1081 156 utg349_pilon exonerate:protein2genome:local gene 1665919 1671927 7408 + . gene_id 0 ; sequence GL50803_113677-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1665919 1670973 . + . utg349_pilon exonerate:protein2genome:local exon 1665919 1670973 . + . insertions 12 ; deletions 2 utg349_pilon exonerate:protein2genome:local splice5 1670974 1670975 . + . intron_id 1 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 1670974 1671512 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1671511 1671512 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1671513 1671927 . + . utg349_pilon exonerate:protein2genome:local exon 1671513 1671927 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 1665919 1671927 7408 + . alignment_id 0 ; Query GL50803_113677-t26_1-p1 ; Align 1665919 1 1380 ; Align 1667299 463 2715 ; Align 1670026 1368 948 ; Align 1671513 1684 297 ; Align 1671811 1783 117 utg731_pilon exonerate:protein2genome:local gene 553727 565312 14068 - . gene_id 0 ; sequence GL50803_113722-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 553727 565312 . - . utg731_pilon exonerate:protein2genome:local exon 553727 565312 . - . insertions 3 ; deletions 11 ; frameshifts 9 utg731_pilon exonerate:protein2genome:local similarity 553727 565312 14068 - . alignment_id 0 ; Query GL50803_113722-t26_1-p1 ; Align 565313 1 1743 ; Align 563568 583 18 ; Align 563550 590 2877 ; Align 560673 1550 420 ; Align 560251 1691 393 ; Align 559858 1823 24 ; Align 559834 1833 1050 ; Align 558784 2184 1443 ; Align 557341 2666 1308 ; Align 556033 3103 33 ; Align 555998 3114 114 ; Align 555881 3152 912 ; Align 554968 3456 186 ; Align 554780 3519 1053 utg731_pilon exonerate:protein2genome:local gene 586118 587278 1794 - . gene_id 0 ; sequence GL50803_113723-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 586118 587278 . - . utg731_pilon exonerate:protein2genome:local exon 586118 587278 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 586118 587278 1794 - . alignment_id 0 ; Query GL50803_113723-t26_1-p1 ; Align 587279 1 1161 utg11_pilon exonerate:protein2genome:local gene 1655284 1655625 425 - . gene_id 0 ; sequence GL50803_11373-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1655284 1655625 . - . utg11_pilon exonerate:protein2genome:local exon 1655284 1655625 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1655284 1655625 425 - . alignment_id 0 ; Query GL50803_11373-t26_1-p1 ; Align 1655626 1 342 utg731_pilon exonerate:protein2genome:local gene 618356 624250 7865 + . gene_id 0 ; sequence GL50803_113740-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 618356 624250 . + . utg731_pilon exonerate:protein2genome:local exon 618356 624250 . + . insertions 12 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 618356 624250 7865 + . alignment_id 0 ; Query GL50803_113740-t26_1-p1 ; Align 618356 9 666 ; Align 619022 232 531 ; Align 619553 410 1359 ; Align 620915 863 678 ; Align 621593 1091 1401 ; Align 623003 1558 1248 utg364_pilon exonerate:protein2genome:local gene 41964 44959 3937 + . gene_id 0 ; sequence GL50803_113741-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 41964 44959 . + . utg364_pilon exonerate:protein2genome:local exon 41964 44959 . + . insertions 3 ; deletions 2 ; frameshifts 2 utg364_pilon exonerate:protein2genome:local similarity 41964 44959 3937 + . alignment_id 0 ; Query GL50803_113741-t26_1-p1 ; Align 41964 1 288 ; Align 42254 98 510 ; Align 42764 269 474 ; Align 43241 427 1719 utg731_pilon exonerate:protein2genome:local gene 677992 678156 143 + . gene_id 0 ; sequence GL50803_113757-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 677992 678156 . + . utg731_pilon exonerate:protein2genome:local exon 677992 678156 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 677992 678156 143 + . alignment_id 0 ; Query GL50803_113757-t26_1-p1 ; Align 677992 1 165 utg731_pilon exonerate:protein2genome:local gene 709740 709919 249 - . gene_id 0 ; sequence GL50803_113766-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 709740 709919 . - . utg731_pilon exonerate:protein2genome:local exon 709740 709919 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 709740 709919 249 - . alignment_id 0 ; Query GL50803_113766-t26_1-p1 ; Align 709920 1 180 utg731_pilon exonerate:protein2genome:local gene 771968 772132 280 + . gene_id 0 ; sequence GL50803_113788-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 771968 772132 . + . utg731_pilon exonerate:protein2genome:local exon 771968 772132 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 771968 772132 280 + . alignment_id 0 ; Query GL50803_113788-t26_1-p1 ; Align 771968 1 165 utg731_pilon exonerate:protein2genome:local gene 781567 782829 1887 - . gene_id 0 ; sequence GL50803_113793-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 781567 782829 . - . utg731_pilon exonerate:protein2genome:local exon 781567 782829 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 781567 782829 1887 - . alignment_id 0 ; Query GL50803_113793-t26_1-p1 ; Align 782830 1 1263 utg11_pilon exonerate:protein2genome:local gene 1178709 1798109 1990 - . gene_id 0 ; sequence GL50803_113797-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1797713 1798109 . - . utg11_pilon exonerate:protein2genome:local exon 1797713 1798109 . - . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1797711 1797712 . - . intron_id 1 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 1631405 1797712 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1631405 1631406 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1631036 1631404 . - . utg11_pilon exonerate:protein2genome:local exon 1631036 1631404 . - . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local splice5 1631034 1631035 . - . intron_id 2 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 1629894 1631035 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 1629894 1629895 . - . intron_id 1 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1629799 1629893 . - . utg11_pilon exonerate:protein2genome:local exon 1629799 1629893 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1629797 1629798 . - . intron_id 3 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 1543738 1629798 . - . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 1543738 1543739 . - . intron_id 2 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1543646 1543737 . - . utg11_pilon exonerate:protein2genome:local exon 1543646 1543737 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1543644 1543645 . - . intron_id 4 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1347366 1543645 . - . intron_id 4 utg11_pilon exonerate:protein2genome:local splice3 1347366 1347367 . - . intron_id 3 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 1346352 1347365 . - . utg11_pilon exonerate:protein2genome:local exon 1346352 1347365 . - . insertions 9 ; deletions 4 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local splice5 1346350 1346351 . - . intron_id 5 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 1178834 1346351 . - . intron_id 5 utg11_pilon exonerate:protein2genome:local splice3 1178834 1178835 . - . intron_id 4 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local cds 1178709 1178833 . - . utg11_pilon exonerate:protein2genome:local exon 1178709 1178833 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1178709 1798109 1990 - . alignment_id 0 ; Query GL50803_113797-t26_1-p1 ; Align 1798110 13 108 ; Align 1797999 49 177 ; Align 1797822 109 108 ; Align 1631403 146 78 ; Align 1631325 173 159 ; Align 1631166 227 72 ; Align 1631094 252 57 ; Align 1629892 272 93 ; Align 1543738 303 90 ; Align 1347365 334 18 ; Align 1347346 340 132 ; Align 1347214 387 507 ; Align 1346704 556 123 ; Align 1346575 597 105 ; Align 1346470 633 117 ; Align 1178832 673 123 utg349_pilon exonerate:protein2genome:local gene 202957 204405 1822 - . gene_id 0 ; sequence GL50803_11380-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 202957 204405 . - . utg349_pilon exonerate:protein2genome:local exon 202957 204405 . - . insertions 0 ; deletions 10 utg349_pilon exonerate:protein2genome:local similarity 202957 204405 1822 - . alignment_id 0 ; Query GL50803_11380-t26_1-p1 ; Align 204406 1 1215 ; Align 203191 411 42 ; Align 203149 427 39 ; Align 203110 443 153 utg11_pilon exonerate:protein2genome:local gene 534638 537079 2768 + . gene_id 0 ; sequence GL50803_113801-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 534638 537079 . + . utg11_pilon exonerate:protein2genome:local exon 534638 537079 . + . insertions 36 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 534638 537079 2768 + . alignment_id 0 ; Query GL50803_113801-t26_1-p1 ; Align 534638 6 132 ; Align 534773 50 420 ; Align 535196 190 45 ; Align 535244 205 258 ; Align 535508 291 60 ; Align 535571 311 273 ; Align 535859 402 498 ; Align 536360 568 720 utg349_pilon exonerate:protein2genome:local gene 201475 202779 1949 - . gene_id 0 ; sequence GL50803_11381-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 201475 202779 . - . utg349_pilon exonerate:protein2genome:local exon 201475 202779 . - . insertions 0 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 201475 202779 1949 - . alignment_id 0 ; Query GL50803_11381-t26_1-p1 ; Align 202780 1 681 ; Align 202099 233 624 utg731_pilon exonerate:protein2genome:local gene 822748 822936 137 - . gene_id 0 ; sequence GL50803_113810-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 822748 822936 . - . utg731_pilon exonerate:protein2genome:local exon 822748 822936 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 822748 822936 137 - . alignment_id 0 ; Query GL50803_113810-t26_1-p1 ; Align 822937 1 189 utg731_pilon exonerate:protein2genome:local gene 874776 874925 103 - . gene_id 0 ; sequence GL50803_113827-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 874776 874925 . - . utg731_pilon exonerate:protein2genome:local exon 874776 874925 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 874776 874925 103 - . alignment_id 0 ; Query GL50803_113827-t26_1-p1 ; Align 874926 1 150 utg349_pilon exonerate:protein2genome:local gene 200178 200915 1013 + . gene_id 0 ; sequence GL50803_11383-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 200178 200915 . + . utg349_pilon exonerate:protein2genome:local exon 200178 200915 . + . insertions 0 ; deletions 8 utg349_pilon exonerate:protein2genome:local similarity 200178 200915 1013 + . alignment_id 0 ; Query GL50803_11383-t26_1-p1 ; Align 200178 1 270 ; Align 200448 94 105 ; Align 200553 134 363 utg47_pilon exonerate:protein2genome:local gene 778355 1041557 6610 - . gene_id 0 ; sequence GL50803_113836-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1036602 1041557 . - . utg47_pilon exonerate:protein2genome:local exon 1036602 1041557 . - . insertions 24 ; deletions 8 ; frameshifts 5 utg47_pilon exonerate:protein2genome:local splice5 1036600 1036601 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 836786 1036601 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 836786 836787 . - . intron_id 0 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 836765 836785 . - . utg47_pilon exonerate:protein2genome:local exon 836765 836785 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 836763 836764 . - . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 778456 836764 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 778456 778457 . - . intron_id 1 ; splice_site "TA" utg47_pilon exonerate:protein2genome:local cds 778355 778455 . - . utg47_pilon exonerate:protein2genome:local exon 778355 778455 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 778355 1041557 6610 - . alignment_id 0 ; Query GL50803_113836-t26_1-p1 ; Align 1041558 1 771 ; Align 1040787 259 270 ; Align 1040517 350 420 ; Align 1040088 490 219 ; Align 1039866 563 96 ; Align 1039770 597 9 ; Align 1039761 601 105 ; Align 1039650 636 222 ; Align 1039427 710 558 ; Align 1038862 896 135 ; Align 1038727 944 435 ; Align 1038289 1089 1686 ; Align 836784 1652 18 ; Align 778454 1659 99 utg349_pilon exonerate:protein2genome:local gene 197473 200162 3903 + . gene_id 0 ; sequence GL50803_11384-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 197473 200162 . + . utg349_pilon exonerate:protein2genome:local exon 197473 200162 . + . insertions 0 ; deletions 3 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 197473 200162 3903 + . alignment_id 0 ; Query GL50803_11384-t26_1-p1 ; Align 197473 1 48 ; Align 197523 18 927 ; Align 198450 328 1026 ; Align 199476 671 687 utg18_pilon exonerate:protein2genome:local gene 386262 387089 640 + . gene_id 0 ; sequence GL50803_113864-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 386262 386711 . + . utg18_pilon exonerate:protein2genome:local exon 386262 386711 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 386712 386713 . + . intron_id 1 ; splice_site "TT" utg18_pilon exonerate:protein2genome:local intron 386712 386981 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 386980 386981 . + . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 386982 387089 . + . utg18_pilon exonerate:protein2genome:local exon 386982 387089 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 386262 387089 640 + . alignment_id 0 ; Query GL50803_113864-t26_1-p1 ; Align 386262 1 450 ; Align 386982 151 108 utg18_pilon exonerate:protein2genome:local gene 433390 434215 538 - . gene_id 0 ; sequence GL50803_113865-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 434116 434215 . - . utg18_pilon exonerate:protein2genome:local exon 434116 434215 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 434114 434115 . - . intron_id 1 ; splice_site "GC" utg18_pilon exonerate:protein2genome:local intron 433857 434115 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 433857 433858 . - . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 433390 433856 . - . utg18_pilon exonerate:protein2genome:local exon 433390 433856 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 433390 434215 538 - . alignment_id 0 ; Query GL50803_113865-t26_1-p1 ; Align 434216 23 99 ; Align 433855 57 465 utg47_pilon exonerate:protein2genome:local gene 985886 986032 144 - . gene_id 0 ; sequence GL50803_113866-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 985886 986032 . - . utg47_pilon exonerate:protein2genome:local exon 985886 986032 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 985886 986032 144 - . alignment_id 0 ; Query GL50803_113866-t26_1-p1 ; Align 986033 1 147 utg47_pilon exonerate:protein2genome:local gene 998223 1000667 3306 + . gene_id 0 ; sequence GL50803_113871-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 998223 1000667 . + . utg47_pilon exonerate:protein2genome:local exon 998223 1000667 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 998223 1000667 3306 + . alignment_id 0 ; Query GL50803_113871-t26_1-p1 ; Align 998223 1 705 ; Align 998931 236 990 ; Align 999924 566 744 utg47_pilon exonerate:protein2genome:local gene 814575 1013151 6812 - . gene_id 0 ; sequence GL50803_113873-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1007964 1013151 . - . utg47_pilon exonerate:protein2genome:local exon 1007964 1013151 . - . insertions 12 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1007962 1007963 . - . intron_id 1 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 814634 1007963 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 814634 814635 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 814575 814633 . - . utg47_pilon exonerate:protein2genome:local exon 814575 814633 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 814575 1013151 6812 - . alignment_id 0 ; Query GL50803_113873-t26_1-p1 ; Align 1013152 1 1071 ; Align 1012069 358 4104 ; Align 814632 1727 15 ; Align 814617 1733 42 utg47_pilon exonerate:protein2genome:local gene 1021033 1027245 9030 - . gene_id 0 ; sequence GL50803_113876-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1021033 1027245 . - . utg47_pilon exonerate:protein2genome:local exon 1021033 1027245 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1021033 1027245 9030 - . alignment_id 0 ; Query GL50803_113876-t26_1-p1 ; Align 1027246 1 6213 utg349_pilon exonerate:protein2genome:local gene 194060 196747 4007 + . gene_id 0 ; sequence GL50803_11389-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 194060 196747 . + . utg349_pilon exonerate:protein2genome:local exon 194060 196747 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 194060 196747 4007 + . alignment_id 0 ; Query GL50803_11389-t26_1-p1 ; Align 194060 1 2688 utg47_pilon exonerate:protein2genome:local gene 1090409 1092676 3593 - . gene_id 0 ; sequence GL50803_113892-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1090409 1092676 . - . utg47_pilon exonerate:protein2genome:local exon 1090409 1092676 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1090409 1092676 3593 - . alignment_id 0 ; Query GL50803_113892-t26_1-p1 ; Align 1092677 1 696 ; Align 1091981 235 1572 utg349_pilon exonerate:protein2genome:local gene 186930 193998 1603 + . gene_id 0 ; sequence GL50803_11390-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 186930 187867 . + . utg349_pilon exonerate:protein2genome:local exon 186930 187867 . + . insertions 3 ; deletions 4 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local splice5 187868 187869 . + . intron_id 1 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local intron 187868 192591 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 192590 192591 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 192592 193290 . + . utg349_pilon exonerate:protein2genome:local exon 192592 193290 . + . insertions 3 ; deletions 4 utg349_pilon exonerate:protein2genome:local splice5 193291 193292 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 193291 193323 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 193322 193323 . + . intron_id 1 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 193324 193998 . + . utg349_pilon exonerate:protein2genome:local exon 193324 193998 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 186930 193998 1603 + . alignment_id 0 ; Query GL50803_11390-t26_1-p1 ; Align 186930 1 87 ; Align 187017 31 309 ; Align 187326 135 135 ; Align 187461 181 6 ; Align 187469 183 72 ; Align 187541 208 300 ; Align 187844 308 24 ; Align 192592 316 33 ; Align 192628 327 66 ; Align 192694 350 561 ; Align 193255 540 36 ; Align 193324 552 675 utg47_pilon exonerate:protein2genome:local gene 1119883 1120059 196 - . gene_id 0 ; sequence GL50803_113902-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1119883 1120059 . - . utg47_pilon exonerate:protein2genome:local exon 1119883 1120059 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1119883 1120059 196 - . alignment_id 0 ; Query GL50803_113902-t26_1-p1 ; Align 1120060 1 177 utg47_pilon exonerate:protein2genome:local gene 1917538 1917639 108 + . gene_id 0 ; sequence GL50803_113921-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1917538 1917639 . + . utg47_pilon exonerate:protein2genome:local exon 1917538 1917639 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1917538 1917639 108 + . alignment_id 0 ; Query GL50803_113921-t26_1-p1 ; Align 1917538 19 102 utg308_pilon exonerate:protein2genome:local gene 299002 300294 1243 + . gene_id 0 ; sequence GL50803_113952-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 299002 300294 . + . utg308_pilon exonerate:protein2genome:local exon 299002 300294 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 299002 300294 1243 + . alignment_id 0 ; Query GL50803_113952-t26_1-p1 ; Align 299002 4 1293 utg64_pilon exonerate:protein2genome:local gene 17444 479431 1765 + . gene_id 0 ; sequence GL50803_113954-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 17444 17531 . + . utg64_pilon exonerate:protein2genome:local exon 17444 17531 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 17532 17533 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 17532 85281 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 85280 85281 . + . intron_id 0 ; splice_site "TG" utg64_pilon exonerate:protein2genome:local cds 85282 85350 . + . utg64_pilon exonerate:protein2genome:local exon 85282 85350 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 85351 85352 . + . intron_id 2 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 85351 150851 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 150850 150851 . + . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 150852 151685 . + . utg64_pilon exonerate:protein2genome:local exon 150852 151685 . + . insertions 36 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 151686 151687 . + . intron_id 3 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 151686 280485 . + . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 280484 280485 . + . intron_id 2 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 280486 281343 . + . utg64_pilon exonerate:protein2genome:local exon 280486 281343 . + . insertions 3 ; deletions 3 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local splice5 281344 281345 . + . intron_id 4 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 281344 479184 . + . intron_id 4 utg64_pilon exonerate:protein2genome:local splice3 479183 479184 . + . intron_id 3 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 479185 479431 . + . utg64_pilon exonerate:protein2genome:local exon 479185 479431 . + . insertions 3 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 17444 479431 1765 + . alignment_id 0 ; Query GL50803_113954-t26_1-p1 ; Align 17444 18 87 ; Align 85284 48 66 ; Align 150854 71 267 ; Align 151124 160 33 ; Align 151157 172 54 ; Align 151214 190 66 ; Align 151286 212 72 ; Align 151373 236 195 ; Align 151571 301 60 ; Align 151637 321 48 ; Align 280488 338 51 ; Align 280539 356 63 ; Align 280605 377 99 ; Align 280704 412 330 ; Align 281036 522 306 ; Align 479186 625 3 ; Align 479192 626 96 ; Align 479288 660 144 utg349_pilon exonerate:protein2genome:local gene 182406 183980 2553 - . gene_id 0 ; sequence GL50803_11397-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 182406 183980 . - . utg349_pilon exonerate:protein2genome:local exon 182406 183980 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 182406 183980 2553 - . alignment_id 0 ; Query GL50803_11397-t26_1-p1 ; Align 183981 1 1575 utg11_pilon exonerate:protein2genome:local gene 1001726 1002550 1165 + . gene_id 0 ; sequence GL50803_113970-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1001726 1002550 . + . utg11_pilon exonerate:protein2genome:local exon 1001726 1002550 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1001726 1002550 1165 + . alignment_id 0 ; Query GL50803_113970-t26_1-p1 ; Align 1001726 1 825 utg11_pilon exonerate:protein2genome:local gene 1000210 1001646 2157 + . gene_id 0 ; sequence GL50803_113971-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1000210 1001646 . + . utg11_pilon exonerate:protein2genome:local exon 1000210 1001646 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1000210 1001646 2157 + . alignment_id 0 ; Query GL50803_113971-t26_1-p1 ; Align 1000210 1 1437 utg11_pilon exonerate:protein2genome:local gene 1427111 1427809 801 + . gene_id 0 ; sequence GL50803_113986-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1427111 1427809 . + . utg11_pilon exonerate:protein2genome:local exon 1427111 1427809 . + . insertions 6 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1427111 1427809 801 + . alignment_id 0 ; Query GL50803_113986-t26_1-p1 ; Align 1427111 38 219 ; Align 1427336 111 207 ; Align 1427543 181 159 ; Align 1427702 235 108 utg11_pilon exonerate:protein2genome:local gene 639218 641707 3560 + . gene_id 0 ; sequence GL50803_113987-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 639218 641707 . + . utg11_pilon exonerate:protein2genome:local exon 639218 641707 . + . insertions 9 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 639218 641707 3560 + . alignment_id 0 ; Query GL50803_113987-t26_1-p1 ; Align 639218 5 1173 ; Align 640391 398 654 ; Align 641048 616 594 ; Align 641648 814 60 utg11_pilon exonerate:protein2genome:local gene 1098293 1098697 620 - . gene_id 0 ; sequence GL50803_113995-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1098293 1098697 . - . utg11_pilon exonerate:protein2genome:local exon 1098293 1098697 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1098293 1098697 620 - . alignment_id 0 ; Query GL50803_113995-t26_1-p1 ; Align 1098698 1 405 utg11_pilon exonerate:protein2genome:local gene 1163603 1166242 3374 - . gene_id 0 ; sequence GL50803_114014-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1163603 1166242 . - . utg11_pilon exonerate:protein2genome:local exon 1163603 1166242 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1163603 1166242 3374 - . alignment_id 0 ; Query GL50803_114014-t26_1-p1 ; Align 1166243 1 2640 utg11_pilon exonerate:protein2genome:local gene 575865 576017 179 - . gene_id 0 ; sequence GL50803_114038-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 575865 576017 . - . utg11_pilon exonerate:protein2genome:local exon 575865 576017 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 575865 576017 179 - . alignment_id 0 ; Query GL50803_114038-t26_1-p1 ; Align 576018 1 153 utg11_pilon exonerate:protein2genome:local gene 573912 574061 168 - . gene_id 0 ; sequence GL50803_114039-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 573912 574061 . - . utg11_pilon exonerate:protein2genome:local exon 573912 574061 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 573912 574061 168 - . alignment_id 0 ; Query GL50803_114039-t26_1-p1 ; Align 574062 3 150 utg308_pilon exonerate:protein2genome:local gene 463806 837495 2024 + . gene_id 0 ; sequence GL50803_114042-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 463806 463967 . + . utg308_pilon exonerate:protein2genome:local exon 463806 463967 . + . insertions 12 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 463968 463969 . + . intron_id 1 ; splice_site "GC" utg308_pilon exonerate:protein2genome:local intron 463968 569607 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 569606 569607 . + . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 569611 569674 . + . utg308_pilon exonerate:protein2genome:local exon 569611 569674 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 569675 569676 . + . intron_id 2 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 569675 573446 . + . intron_id 2 utg308_pilon exonerate:protein2genome:local splice3 573445 573446 . + . intron_id 1 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 573447 573872 . + . utg308_pilon exonerate:protein2genome:local exon 573447 573872 . + . insertions 3 ; deletions 4 utg308_pilon exonerate:protein2genome:local splice5 573873 573874 . + . intron_id 3 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 573873 723695 . + . intron_id 3 utg308_pilon exonerate:protein2genome:local splice3 723694 723695 . + . intron_id 2 ; splice_site "AT" utg308_pilon exonerate:protein2genome:local cds 723696 723815 . + . utg308_pilon exonerate:protein2genome:local exon 723696 723815 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 723816 723817 . + . intron_id 4 ; splice_site "GA" utg308_pilon exonerate:protein2genome:local intron 723816 835939 . + . intron_id 4 utg308_pilon exonerate:protein2genome:local splice3 835938 835939 . + . intron_id 3 ; splice_site "GG" utg308_pilon exonerate:protein2genome:local cds 835940 837495 . + . utg308_pilon exonerate:protein2genome:local exon 835940 837495 . + . insertions 6 ; deletions 0 ; frameshifts 3 utg308_pilon exonerate:protein2genome:local similarity 463806 837495 2024 + . alignment_id 0 ; Query GL50803_114042-t26_1-p1 ; Align 463806 55 33 ; Align 463845 66 57 ; Align 463905 85 18 ; Align 463926 91 42 ; Align 569611 105 63 ; Align 573449 127 138 ; Align 573587 175 54 ; Align 573641 195 138 ; Align 573782 241 90 ; Align 723698 272 117 ; Align 835942 312 300 ; Align 836245 412 159 ; Align 836405 465 156 ; Align 836564 517 276 ; Align 836841 609 468 ; Align 837310 765 186 utg11_pilon exonerate:protein2genome:local gene 379785 381515 1588 + . gene_id 0 ; sequence GL50803_114043-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 379785 380311 . + . utg11_pilon exonerate:protein2genome:local exon 379785 380311 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 380312 380313 . + . intron_id 1 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 380312 380380 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 380379 380380 . + . intron_id 0 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local cds 380381 380969 . + . utg11_pilon exonerate:protein2genome:local exon 380381 380969 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 380970 380971 . + . intron_id 2 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 380970 381107 . + . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 381106 381107 . + . intron_id 1 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 381108 381515 . + . utg11_pilon exonerate:protein2genome:local exon 381108 381515 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 379785 381515 1588 + . alignment_id 0 ; Query GL50803_114043-t26_1-p1 ; Align 379785 265 525 ; Align 380382 441 588 ; Align 381108 637 408 utg11_pilon exonerate:protein2genome:local gene 381575 382426 669 + . gene_id 0 ; sequence GL50803_114044-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 381575 382426 . + . utg11_pilon exonerate:protein2genome:local exon 381575 382426 . + . insertions 12 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 381575 382426 669 + . alignment_id 0 ; Query GL50803_114044-t26_1-p1 ; Align 381575 14 336 ; Align 381917 126 132 ; Align 382055 170 372 utg11_pilon exonerate:protein2genome:local gene 1159538 1757612 1760 + . gene_id 0 ; sequence GL50803_114065-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1159538 1160303 . + . utg11_pilon exonerate:protein2genome:local exon 1159538 1160303 . + . insertions 15 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1160304 1160305 . + . intron_id 1 ; splice_site "CA" utg11_pilon exonerate:protein2genome:local intron 1160304 1345477 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1345476 1345477 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1345478 1345525 . + . utg11_pilon exonerate:protein2genome:local exon 1345478 1345525 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1345526 1345527 . + . intron_id 2 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local intron 1345526 1545086 . + . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 1545085 1545086 . + . intron_id 1 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local cds 1545087 1545180 . + . utg11_pilon exonerate:protein2genome:local exon 1545087 1545180 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1545181 1545182 . + . intron_id 3 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 1545181 1744768 . + . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 1744767 1744768 . + . intron_id 2 ; splice_site "TG" utg11_pilon exonerate:protein2genome:local cds 1744769 1745491 . + . utg11_pilon exonerate:protein2genome:local exon 1744769 1745491 . + . insertions 3 ; deletions 2 utg11_pilon exonerate:protein2genome:local splice5 1745492 1745493 . + . intron_id 4 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1745492 1757437 . + . intron_id 4 utg11_pilon exonerate:protein2genome:local splice3 1757436 1757437 . + . intron_id 3 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 1757438 1757612 . + . utg11_pilon exonerate:protein2genome:local exon 1757438 1757612 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1159538 1757612 1760 + . alignment_id 0 ; Query GL50803_114065-t26_1-p1 ; Align 1159538 8 48 ; Align 1159586 25 90 ; Align 1159679 55 294 ; Align 1159979 153 138 ; Align 1160120 199 120 ; Align 1160243 239 60 ; Align 1345480 260 45 ; Align 1545089 276 90 ; Align 1744770 307 81 ; Align 1744851 335 54 ; Align 1744908 353 312 ; Align 1745220 458 270 ; Align 1757439 549 174 utg47_pilon exonerate:protein2genome:local gene 1239748 1239975 197 + . gene_id 0 ; sequence GL50803_114068-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1239748 1239975 . + . utg47_pilon exonerate:protein2genome:local exon 1239748 1239975 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1239748 1239975 197 + . alignment_id 0 ; Query GL50803_114068-t26_1-p1 ; Align 1239748 8 228 utg308_pilon exonerate:protein2genome:local gene 835036 837495 2857 + . gene_id 0 ; sequence GL50803_114089-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 835036 837495 . + . utg308_pilon exonerate:protein2genome:local exon 835036 837495 . + . insertions 21 ; deletions 4 ; frameshifts 3 utg308_pilon exonerate:protein2genome:local similarity 835036 837495 2857 + . alignment_id 0 ; Query GL50803_114089-t26_1-p1 ; Align 835036 1 198 ; Align 835240 67 111 ; Align 835360 104 480 ; Align 835840 268 294 ; Align 836137 366 267 ; Align 836405 455 156 ; Align 836564 507 276 ; Align 836841 599 468 ; Align 837310 755 186 utg364_pilon exonerate:protein2genome:local gene 63615 64502 1452 - . gene_id 0 ; sequence GL50803_114119-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 63615 64502 . - . utg364_pilon exonerate:protein2genome:local exon 63615 64502 . - . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 63615 64502 1452 - . alignment_id 0 ; Query GL50803_114119-t26_1-p1 ; Align 64503 93 888 utg731_pilon exonerate:protein2genome:local gene 898815 1347633 1061 - . gene_id 0 ; sequence GL50803_114120-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1347488 1347633 . - . utg731_pilon exonerate:protein2genome:local exon 1347488 1347633 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1347486 1347487 . - . intron_id 1 ; splice_site "GA" utg731_pilon exonerate:protein2genome:local intron 1174305 1347487 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1174305 1174306 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1173773 1174304 . - . utg731_pilon exonerate:protein2genome:local exon 1173773 1174304 . - . insertions 15 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1173771 1173772 . - . intron_id 2 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1173614 1173772 . - . intron_id 2 utg731_pilon exonerate:protein2genome:local splice3 1173614 1173615 . - . intron_id 1 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1173374 1173613 . - . utg731_pilon exonerate:protein2genome:local exon 1173374 1173613 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1173372 1173373 . - . intron_id 3 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1172762 1173373 . - . intron_id 3 utg731_pilon exonerate:protein2genome:local splice3 1172762 1172763 . - . intron_id 2 ; splice_site "TG" utg731_pilon exonerate:protein2genome:local cds 1172436 1172761 . - . utg731_pilon exonerate:protein2genome:local exon 1172436 1172761 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local splice5 1172434 1172435 . - . intron_id 4 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 994443 1172435 . - . intron_id 4 utg731_pilon exonerate:protein2genome:local splice3 994443 994444 . - . intron_id 3 ; splice_site "AA" utg731_pilon exonerate:protein2genome:local cds 994330 994442 . - . utg731_pilon exonerate:protein2genome:local exon 994330 994442 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 994328 994329 . - . intron_id 5 ; splice_site "CT" utg731_pilon exonerate:protein2genome:local intron 899231 994329 . - . intron_id 5 utg731_pilon exonerate:protein2genome:local splice3 899231 899232 . - . intron_id 4 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 898815 899230 . - . utg731_pilon exonerate:protein2genome:local exon 898815 899230 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 898815 1347633 1061 - . alignment_id 0 ; Query GL50803_114120-t26_1-p1 ; Align 1347634 1 144 ; Align 1174304 50 123 ; Align 1174169 91 72 ; Align 1174094 115 321 ; Align 1173614 222 240 ; Align 1172762 302 90 ; Align 1172672 333 234 ; Align 994442 412 111 ; Align 899229 450 321 ; Align 898905 557 90 utg18_pilon exonerate:protein2genome:local gene 131384 561345 1547 - . gene_id 0 ; sequence GL50803_114121-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 561207 561345 . - . utg18_pilon exonerate:protein2genome:local exon 561207 561345 . - . insertions 0 ; deletions 1 utg18_pilon exonerate:protein2genome:local splice5 561205 561206 . - . intron_id 1 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 441869 561206 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 441869 441870 . - . intron_id 0 ; splice_site "TG" utg18_pilon exonerate:protein2genome:local cds 441674 441868 . - . utg18_pilon exonerate:protein2genome:local exon 441674 441868 . - . insertions 0 ; deletions 1 utg18_pilon exonerate:protein2genome:local splice5 441672 441673 . - . intron_id 2 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 325429 441673 . - . intron_id 2 utg18_pilon exonerate:protein2genome:local splice3 325429 325430 . - . intron_id 1 ; splice_site "AT" utg18_pilon exonerate:protein2genome:local cds 325174 325428 . - . utg18_pilon exonerate:protein2genome:local exon 325174 325428 . - . insertions 3 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 325172 325173 . - . intron_id 3 ; splice_site "AT" utg18_pilon exonerate:protein2genome:local intron 256594 325173 . - . intron_id 3 utg18_pilon exonerate:protein2genome:local splice3 256594 256595 . - . intron_id 2 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 256341 256593 . - . utg18_pilon exonerate:protein2genome:local exon 256341 256593 . - . insertions 3 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 256339 256340 . - . intron_id 4 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 177508 256340 . - . intron_id 4 utg18_pilon exonerate:protein2genome:local splice3 177508 177509 . - . intron_id 3 ; splice_site "AC" utg18_pilon exonerate:protein2genome:local cds 176902 177507 . - . utg18_pilon exonerate:protein2genome:local exon 176902 177507 . - . insertions 15 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 176900 176901 . - . intron_id 5 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 131538 176901 . - . intron_id 5 utg18_pilon exonerate:protein2genome:local splice3 131538 131539 . - . intron_id 4 ; splice_site "GG" utg18_pilon exonerate:protein2genome:local cds 131384 131537 . - . utg18_pilon exonerate:protein2genome:local exon 131384 131537 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 131384 561345 1547 - . alignment_id 0 ; Query GL50803_114121-t26_1-p1 ; Align 561346 1 36 ; Align 561310 14 102 ; Align 441867 49 51 ; Align 441816 67 141 ; Align 325427 115 192 ; Align 325232 179 57 ; Align 256592 199 45 ; Align 256544 214 201 ; Align 177507 282 144 ; Align 177357 330 129 ; Align 177225 373 15 ; Align 177204 378 300 ; Align 131537 479 153 utg265_pilon exonerate:protein2genome:local gene 476216 590654 1713 + . gene_id 0 ; sequence GL50803_114122-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 476216 477308 . + . utg265_pilon exonerate:protein2genome:local exon 476216 477308 . + . insertions 24 ; deletions 7 utg265_pilon exonerate:protein2genome:local splice5 477309 477310 . + . intron_id 1 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 477309 556063 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 556062 556063 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 556064 556627 . + . utg265_pilon exonerate:protein2genome:local exon 556064 556627 . + . insertions 3 ; deletions 3 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local splice5 556628 556629 . + . intron_id 2 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 556628 589087 . + . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 589086 589087 . + . intron_id 1 ; splice_site "CA" utg265_pilon exonerate:protein2genome:local cds 589088 589205 . + . utg265_pilon exonerate:protein2genome:local exon 589088 589205 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 589206 589207 . + . intron_id 3 ; splice_site "AT" utg265_pilon exonerate:protein2genome:local intron 589206 590511 . + . intron_id 3 utg265_pilon exonerate:protein2genome:local splice3 590510 590511 . + . intron_id 2 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 590512 590654 . + . utg265_pilon exonerate:protein2genome:local exon 590512 590654 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 476216 590654 1713 + . alignment_id 0 ; Query GL50803_114122-t26_1-p1 ; Align 476216 6 42 ; Align 476258 21 96 ; Align 476357 53 135 ; Align 476495 98 36 ; Align 476531 111 123 ; Align 476657 152 78 ; Align 476744 178 213 ; Align 476960 249 27 ; Align 476990 258 51 ; Align 477041 280 267 ; Align 556066 370 21 ; Align 556088 377 231 ; Align 556319 455 111 ; Align 556433 492 72 ; Align 556505 518 123 ; Align 589088 559 117 ; Align 590514 599 141 utg308_pilon exonerate:protein2genome:local gene 961028 961186 207 + . gene_id 0 ; sequence GL50803_114148-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 961028 961186 . + . utg308_pilon exonerate:protein2genome:local exon 961028 961186 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 961028 961186 207 + . alignment_id 0 ; Query GL50803_114148-t26_1-p1 ; Align 961028 1 159 utg212_pilon exonerate:protein2genome:local gene 119150 120838 2213 - . gene_id 0 ; sequence GL50803_114161-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 119150 120838 . - . utg212_pilon exonerate:protein2genome:local exon 119150 120838 . - . insertions 21 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 119150 120838 2213 - . alignment_id 0 ; Query GL50803_114161-t26_1-p1 ; Align 120839 1 144 ; Align 120692 49 93 ; Align 120593 80 480 ; Align 120110 240 135 ; Align 119969 285 726 ; Align 119240 527 90 utg47_pilon exonerate:protein2genome:local gene 1697314 2022646 1824 - . gene_id 0 ; sequence GL50803_114162-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2022153 2022646 . - . utg47_pilon exonerate:protein2genome:local exon 2022153 2022646 . - . insertions 0 ; deletions 12 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local splice5 2022151 2022152 . - . intron_id 1 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 2022059 2022152 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 2022059 2022060 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2021764 2022058 . - . utg47_pilon exonerate:protein2genome:local exon 2021764 2022058 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 2021762 2021763 . - . intron_id 2 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1957451 2021763 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1957451 1957452 . - . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local cds 1957248 1957450 . - . utg47_pilon exonerate:protein2genome:local exon 1957248 1957450 . - . insertions 12 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1957246 1957247 . - . intron_id 3 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local intron 1914531 1957247 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 1914531 1914532 . - . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1914050 1914530 . - . utg47_pilon exonerate:protein2genome:local exon 1914050 1914530 . - . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1914048 1914049 . - . intron_id 4 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1838150 1914049 . - . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 1838150 1838151 . - . intron_id 3 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 1838000 1838149 . - . utg47_pilon exonerate:protein2genome:local exon 1838000 1838149 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1837998 1837999 . - . intron_id 5 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1699726 1837999 . - . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 1699726 1699727 . - . intron_id 4 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1699541 1699725 . - . utg47_pilon exonerate:protein2genome:local exon 1699541 1699725 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1699539 1699540 . - . intron_id 6 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1697443 1699540 . - . intron_id 6 utg47_pilon exonerate:protein2genome:local splice3 1697443 1697444 . - . intron_id 5 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 1697314 1697442 . - . utg47_pilon exonerate:protein2genome:local exon 1697314 1697442 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1697314 2022646 1824 - . alignment_id 0 ; Query GL50803_114162-t26_1-p1 ; Align 2022647 20 54 ; Align 2022593 41 42 ; Align 2022551 58 15 ; Align 2022535 63 90 ; Align 2022445 96 15 ; Align 2022429 101 153 ; Align 2022276 155 123 ; Align 2022059 196 96 ; Align 2021963 231 198 ; Align 1957449 298 69 ; Align 1957377 321 45 ; Align 1957323 336 75 ; Align 1914531 361 303 ; Align 1914225 462 51 ; Align 1914171 479 120 ; Align 1838148 520 45 ; Align 1838103 536 54 ; Align 1838049 555 48 ; Align 1699724 572 45 ; Align 1699676 587 135 ; Align 1697443 632 129 utg731_pilon exonerate:protein2genome:local gene 343238 345652 3343 - . gene_id 0 ; sequence GL50803_114165-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 343238 345652 . - . utg731_pilon exonerate:protein2genome:local exon 343238 345652 . - . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 343238 345652 3343 - . alignment_id 0 ; Query GL50803_114165-t26_1-p1 ; Align 345653 1 879 ; Align 344771 294 912 ; Align 343853 598 615 utg731_pilon exonerate:protein2genome:local gene 387303 394931 10728 - . gene_id 0 ; sequence GL50803_114180-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 387303 394931 . - . utg731_pilon exonerate:protein2genome:local exon 387303 394931 . - . insertions 18 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 387303 394931 10728 - . alignment_id 0 ; Query GL50803_114180-t26_1-p1 ; Align 394932 1 519 ; Align 394410 174 2871 ; Align 391533 1131 336 ; Align 391194 1243 549 ; Align 390639 1426 99 ; Align 390540 1460 3237 utg99_pilon exonerate:protein2genome:local gene 62364 157172 2380 - . gene_id 0 ; sequence GL50803_114192-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 156170 157172 . - . utg99_pilon exonerate:protein2genome:local exon 156170 157172 . - . insertions 15 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 156168 156169 . - . intron_id 1 ; splice_site "AT" utg99_pilon exonerate:protein2genome:local intron 155918 156169 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 155918 155919 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 155032 155917 . - . utg99_pilon exonerate:protein2genome:local exon 155032 155917 . - . insertions 3 ; deletions 3 ; frameshifts 2 utg99_pilon exonerate:protein2genome:local splice5 155030 155031 . - . intron_id 2 ; splice_site "GA" utg99_pilon exonerate:protein2genome:local intron 154591 155031 . - . intron_id 2 utg99_pilon exonerate:protein2genome:local splice3 154591 154592 . - . intron_id 1 ; splice_site "AC" utg99_pilon exonerate:protein2genome:local cds 153857 154590 . - . utg99_pilon exonerate:protein2genome:local exon 153857 154590 . - . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local splice5 153855 153856 . - . intron_id 3 ; splice_site "GA" utg99_pilon exonerate:protein2genome:local intron 65392 153856 . - . intron_id 3 utg99_pilon exonerate:protein2genome:local splice3 65392 65393 . - . intron_id 2 ; splice_site "AA" utg99_pilon exonerate:protein2genome:local cds 65109 65391 . - . utg99_pilon exonerate:protein2genome:local exon 65109 65391 . - . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 65107 65108 . - . intron_id 4 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 62427 65108 . - . intron_id 4 utg99_pilon exonerate:protein2genome:local splice3 62427 62428 . - . intron_id 3 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 62364 62426 . - . utg99_pilon exonerate:protein2genome:local exon 62364 62426 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 62364 157172 2380 - . alignment_id 0 ; Query GL50803_114192-t26_1-p1 ; Align 157173 48 414 ; Align 156744 186 573 ; Align 155916 378 312 ; Align 155604 485 168 ; Align 155433 541 264 ; Align 155167 629 135 ; Align 154591 674 573 ; Align 154018 866 159 ; Align 65391 920 87 ; Align 65301 949 192 ; Align 62427 1013 63 utg349_pilon exonerate:protein2genome:local gene 268135 269049 1384 - . gene_id 0 ; sequence GL50803_114199-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 268135 269049 . - . utg349_pilon exonerate:protein2genome:local exon 268135 269049 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 268135 269049 1384 - . alignment_id 0 ; Query GL50803_114199-t26_1-p1 ; Align 269050 1 915 utg349_pilon exonerate:protein2genome:local gene 272120 459127 4463 - . gene_id 0 ; sequence GL50803_114201-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 459093 459127 . - . utg349_pilon exonerate:protein2genome:local exon 459093 459127 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 459091 459092 . - . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 275715 459092 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 275715 275716 . - . intron_id 0 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local cds 272120 275714 . - . utg349_pilon exonerate:protein2genome:local exon 272120 275714 . - . insertions 6 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 272120 459127 4463 - . alignment_id 0 ; Query GL50803_114201-t26_1-p1 ; Align 459128 2447 33 ; Align 275714 2459 522 ; Align 275189 2633 702 ; Align 274487 2869 663 ; Align 273824 3091 57 ; Align 273767 3111 690 ; Align 273074 3341 99 ; Align 272975 3375 393 ; Align 272582 3507 462 utg349_pilon exonerate:protein2genome:local gene 299949 306731 9349 + . gene_id 0 ; sequence GL50803_114209-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 299949 303777 . + . utg349_pilon exonerate:protein2genome:local exon 299949 303777 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 303778 303779 . + . intron_id 1 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local intron 303778 303810 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 303809 303810 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 303811 306731 . + . utg349_pilon exonerate:protein2genome:local exon 303811 306731 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 299949 306731 9349 + . alignment_id 0 ; Query GL50803_114209-t26_1-p1 ; Align 299949 1 3828 ; Align 303813 1278 2919 utg349_pilon exonerate:protein2genome:local gene 309508 312768 4701 + . gene_id 0 ; sequence GL50803_114210-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 309508 312768 . + . utg349_pilon exonerate:protein2genome:local exon 309508 312768 . + . insertions 3 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 309508 312768 4701 + . alignment_id 0 ; Query GL50803_114210-t26_1-p1 ; Align 309508 1 2160 ; Align 311668 723 978 ; Align 312649 1049 120 utg349_pilon exonerate:protein2genome:local gene 323227 327060 4930 + . gene_id 0 ; sequence GL50803_114216-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 323227 327060 . + . utg349_pilon exonerate:protein2genome:local exon 323227 327060 . + . insertions 0 ; deletions 8 utg349_pilon exonerate:protein2genome:local similarity 323227 327060 4930 + . alignment_id 0 ; Query GL50803_114216-t26_1-p1 ; Align 323227 329 825 ; Align 324052 605 492 ; Align 324544 770 648 ; Align 325192 989 318 ; Align 325510 1096 1128 ; Align 326638 1474 423 utg349_pilon exonerate:protein2genome:local gene 333622 335037 2350 - . gene_id 0 ; sequence GL50803_114218-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 333622 335037 . - . utg349_pilon exonerate:protein2genome:local exon 333622 335037 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 333622 335037 2350 - . alignment_id 0 ; Query GL50803_114218-t26_1-p1 ; Align 335038 20 1416 utg47_pilon exonerate:protein2genome:local gene 1665351 1667159 2312 + . gene_id 0 ; sequence GL50803_114230-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1665351 1667159 . + . utg47_pilon exonerate:protein2genome:local exon 1665351 1667159 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1665351 1667159 2312 + . alignment_id 0 ; Query GL50803_114230-t26_1-p1 ; Align 1665351 1 915 ; Align 1666266 308 894 utg47_pilon exonerate:protein2genome:local gene 1676357 1676575 162 + . gene_id 0 ; sequence GL50803_114231-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1676357 1676575 . + . utg47_pilon exonerate:protein2genome:local exon 1676357 1676575 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1676357 1676575 162 + . alignment_id 0 ; Query GL50803_114231-t26_1-p1 ; Align 1676357 1 219 utg47_pilon exonerate:protein2genome:local gene 1724022 1730075 8279 + . gene_id 0 ; sequence GL50803_114242-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1724022 1730075 . + . utg47_pilon exonerate:protein2genome:local exon 1724022 1730075 . + . insertions 3 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1724022 1730075 8279 + . alignment_id 0 ; Query GL50803_114242-t26_1-p1 ; Align 1724022 7 3507 ; Align 1727532 1176 33 ; Align 1727565 1188 2310 ; Align 1729875 1959 201 utg47_pilon exonerate:protein2genome:local gene 1741873 1743090 2033 + . gene_id 0 ; sequence GL50803_114246-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1741873 1743090 . + . utg47_pilon exonerate:protein2genome:local exon 1741873 1743090 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1741873 1743090 2033 + . alignment_id 0 ; Query GL50803_114246-t26_1-p1 ; Align 1741873 1 1218 utg47_pilon exonerate:protein2genome:local gene 1743144 1744829 2267 - . gene_id 0 ; sequence GL50803_114247-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1743144 1744829 . - . utg47_pilon exonerate:protein2genome:local exon 1743144 1744829 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1743144 1744829 2267 - . alignment_id 0 ; Query GL50803_114247-t26_1-p1 ; Align 1744830 1 1686 utg64_pilon exonerate:protein2genome:local gene 150890 479431 1776 + . gene_id 0 ; sequence GL50803_114277-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 150890 151262 . + . utg64_pilon exonerate:protein2genome:local exon 150890 151262 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 151263 151264 . + . intron_id 1 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local intron 151263 153995 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 153994 153995 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 153996 154646 . + . utg64_pilon exonerate:protein2genome:local exon 153996 154646 . + . insertions 3 ; deletions 7 ; frameshifts 4 utg64_pilon exonerate:protein2genome:local splice5 154647 154648 . + . intron_id 2 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 154647 280739 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 280738 280739 . + . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 280740 281343 . + . utg64_pilon exonerate:protein2genome:local exon 280740 281343 . + . insertions 3 ; deletions 1 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local splice5 281344 281345 . + . intron_id 3 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 281344 479184 . + . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 479183 479184 . + . intron_id 2 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 479185 479431 . + . utg64_pilon exonerate:protein2genome:local exon 479185 479431 . + . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 150890 479431 1776 + . alignment_id 0 ; Query GL50803_114277-t26_1-p1 ; Align 150890 19 267 ; Align 151157 109 105 ; Align 153998 145 81 ; Align 154079 173 72 ; Align 154151 198 39 ; Align 154194 211 99 ; Align 154296 244 39 ; Align 154335 258 51 ; Align 154386 277 15 ; Align 154401 283 222 ; Align 154623 358 24 ; Align 280740 366 135 ; Align 280875 412 162 ; Align 281039 466 297 ; Align 281339 565 3 ; Align 479186 567 102 ; Align 479288 603 144 utg349_pilon exonerate:protein2genome:local gene 1435529 1435690 225 + . gene_id 0 ; sequence GL50803_114286-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1435529 1435690 . + . utg349_pilon exonerate:protein2genome:local exon 1435529 1435690 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1435529 1435690 225 + . alignment_id 0 ; Query GL50803_114286-t26_1-p1 ; Align 1435529 2 162 utg349_pilon exonerate:protein2genome:local gene 1462751 1462912 225 - . gene_id 0 ; sequence GL50803_114286-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1462751 1462912 . - . utg349_pilon exonerate:protein2genome:local exon 1462751 1462912 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1462751 1462912 225 - . alignment_id 0 ; Query GL50803_114286-t26_1-p1 ; Align 1462913 2 162 utg349_pilon exonerate:protein2genome:local gene 711991 714720 4234 + . gene_id 0 ; sequence GL50803_114307-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 711991 714720 . + . utg349_pilon exonerate:protein2genome:local exon 711991 714720 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 711991 714720 4234 + . alignment_id 0 ; Query GL50803_114307-t26_1-p1 ; Align 711991 4 2730 utg349_pilon exonerate:protein2genome:local gene 782026 782193 204 + . gene_id 0 ; sequence GL50803_114333-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 782026 782193 . + . utg349_pilon exonerate:protein2genome:local exon 782026 782193 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 782026 782193 204 + . alignment_id 0 ; Query GL50803_114333-t26_1-p1 ; Align 782026 1 168 utg11_pilon exonerate:protein2genome:local gene 1427111 1427809 798 + . gene_id 0 ; sequence GL50803_114336-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1427111 1427809 . + . utg11_pilon exonerate:protein2genome:local exon 1427111 1427809 . + . insertions 6 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1427111 1427809 798 + . alignment_id 0 ; Query GL50803_114336-t26_1-p1 ; Align 1427111 38 216 ; Align 1427333 110 210 ; Align 1427543 181 159 ; Align 1427702 235 108 utg47_pilon exonerate:protein2genome:local gene 1522926 1523674 1192 - . gene_id 0 ; sequence GL50803_11434-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1522926 1523674 . - . utg47_pilon exonerate:protein2genome:local exon 1522926 1523674 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1522926 1523674 1192 - . alignment_id 0 ; Query GL50803_11434-t26_1-p1 ; Align 1523675 1 150 ; Align 1523523 52 597 utg349_pilon exonerate:protein2genome:local gene 843310 843462 167 + . gene_id 0 ; sequence GL50803_114353-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 843310 843462 . + . utg349_pilon exonerate:protein2genome:local exon 843310 843462 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 843310 843462 167 + . alignment_id 0 ; Query GL50803_114353-t26_1-p1 ; Align 843310 1 153 utg47_pilon exonerate:protein2genome:local gene 1522106 1522885 1190 - . gene_id 0 ; sequence GL50803_11436-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1522106 1522885 . - . utg47_pilon exonerate:protein2genome:local exon 1522106 1522885 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1522106 1522885 1190 - . alignment_id 0 ; Query GL50803_11436-t26_1-p1 ; Align 1522886 5 780 utg47_pilon exonerate:protein2genome:local gene 1521218 1522042 920 - . gene_id 0 ; sequence GL50803_11438-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1521218 1522042 . - . utg47_pilon exonerate:protein2genome:local exon 1521218 1522042 . - . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 1521218 1522042 920 - . alignment_id 0 ; Query GL50803_11438-t26_1-p1 ; Align 1522043 1 480 ; Align 1521563 166 345 utg18_pilon exonerate:protein2genome:local gene 456061 457713 1749 + . gene_id 0 ; sequence GL50803_114392-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 456061 457713 . + . utg18_pilon exonerate:protein2genome:local exon 456061 457713 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 456061 457713 1749 + . alignment_id 0 ; Query GL50803_114392-t26_1-p1 ; Align 456061 1 1653 utg11_pilon exonerate:protein2genome:local gene 1720296 1720475 184 - . gene_id 0 ; sequence GL50803_114415-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1720296 1720475 . - . utg11_pilon exonerate:protein2genome:local exon 1720296 1720475 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1720296 1720475 184 - . alignment_id 0 ; Query GL50803_114415-t26_1-p1 ; Align 1720476 5 180 utg47_pilon exonerate:protein2genome:local gene 1515157 1517072 2954 + . gene_id 0 ; sequence GL50803_11442-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1515157 1517072 . + . utg47_pilon exonerate:protein2genome:local exon 1515157 1517072 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1515157 1517072 2954 + . alignment_id 0 ; Query GL50803_11442-t26_1-p1 ; Align 1515157 1 1293 ; Align 1516452 433 621 utg11_pilon exonerate:protein2genome:local gene 1664723 1664884 169 + . gene_id 0 ; sequence GL50803_114429-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1664723 1664884 . + . utg11_pilon exonerate:protein2genome:local exon 1664723 1664884 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1664723 1664884 169 + . alignment_id 0 ; Query GL50803_114429-t26_1-p1 ; Align 1664723 3 162 utg47_pilon exonerate:protein2genome:local gene 1514796 1515095 417 - . gene_id 0 ; sequence GL50803_11443-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1514796 1515095 . - . utg47_pilon exonerate:protein2genome:local exon 1514796 1515095 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1514796 1515095 417 - . alignment_id 0 ; Query GL50803_11443-t26_1-p1 ; Align 1515096 1 300 utg16500_pilon exonerate:protein2genome:local gene 49120 49518 335 - . gene_id 0 ; sequence GL50803_114440-t26_1-p1 ; gene_orientation . utg16500_pilon exonerate:protein2genome:local cds 49120 49518 . - . utg16500_pilon exonerate:protein2genome:local exon 49120 49518 . - . insertions 0 ; deletions 0 utg16500_pilon exonerate:protein2genome:local similarity 49120 49518 335 - . alignment_id 0 ; Query GL50803_114440-t26_1-p1 ; Align 49519 124 399 utg265_pilon exonerate:protein2genome:local gene 663997 664725 1134 + . gene_id 0 ; sequence GL50803_114442-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 663997 664725 . + . utg265_pilon exonerate:protein2genome:local exon 663997 664725 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 663997 664725 1134 + . alignment_id 0 ; Query GL50803_114442-t26_1-p1 ; Align 663997 1 729 utg308_pilon exonerate:protein2genome:local gene 299002 300303 1255 + . gene_id 0 ; sequence GL50803_114445-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 299002 300303 . + . utg308_pilon exonerate:protein2genome:local exon 299002 300303 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 299002 300303 1255 + . alignment_id 0 ; Query GL50803_114445-t26_1-p1 ; Align 299002 4 1302 utg11_pilon exonerate:protein2genome:local gene 649201 649389 185 - . gene_id 0 ; sequence GL50803_114454-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 649201 649389 . - . utg11_pilon exonerate:protein2genome:local exon 649201 649389 . - . insertions 12 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 649201 649389 185 - . alignment_id 0 ; Query GL50803_114454-t26_1-p1 ; Align 649390 2 66 ; Align 649321 24 21 ; Align 649297 31 12 ; Align 649279 35 78 utg212_pilon exonerate:protein2genome:local gene 405500 405688 185 + . gene_id 0 ; sequence GL50803_114454-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 405500 405688 . + . utg212_pilon exonerate:protein2genome:local exon 405500 405688 . + . insertions 12 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 405500 405688 185 + . alignment_id 0 ; Query GL50803_114454-t26_1-p1 ; Align 405500 2 66 ; Align 405569 24 21 ; Align 405593 31 12 ; Align 405611 35 78 utg265_pilon exonerate:protein2genome:local gene 336475 336663 185 + . gene_id 0 ; sequence GL50803_114454-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 336475 336663 . + . utg265_pilon exonerate:protein2genome:local exon 336475 336663 . + . insertions 12 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 336475 336663 185 + . alignment_id 0 ; Query GL50803_114454-t26_1-p1 ; Align 336475 2 66 ; Align 336544 24 21 ; Align 336568 31 12 ; Align 336586 35 78 utg308_pilon exonerate:protein2genome:local gene 827087 827640 591 + . gene_id 0 ; sequence GL50803_114455-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 827087 827368 . + . utg308_pilon exonerate:protein2genome:local exon 827087 827368 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 827369 827370 . + . intron_id 1 ; splice_site "GC" utg308_pilon exonerate:protein2genome:local intron 827369 827427 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 827426 827427 . + . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 827428 827640 . + . utg308_pilon exonerate:protein2genome:local exon 827428 827640 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 827087 827640 591 + . alignment_id 0 ; Query GL50803_114455-t26_1-p1 ; Align 827087 1 282 ; Align 827428 95 213 utg47_pilon exonerate:protein2genome:local gene 1511172 1513220 2792 - . gene_id 0 ; sequence GL50803_11446-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1511708 1513220 . - . utg47_pilon exonerate:protein2genome:local exon 1511708 1513220 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1511706 1511707 . - . intron_id 1 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local intron 1511678 1511707 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1511678 1511679 . - . intron_id 0 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1511172 1511677 . - . utg47_pilon exonerate:protein2genome:local exon 1511172 1511677 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1511172 1513220 2792 - . alignment_id 0 ; Query GL50803_11446-t26_1-p1 ; Align 1513221 1 1512 ; Align 1511676 506 84 ; Align 1511589 534 417 utg18_pilon exonerate:protein2genome:local gene 105378 107033 2677 - . gene_id 0 ; sequence GL50803_114462-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 105378 107033 . - . utg18_pilon exonerate:protein2genome:local exon 105378 107033 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 105378 107033 2677 - . alignment_id 0 ; Query GL50803_114462-t26_1-p1 ; Align 107034 1 1656 utg18_pilon exonerate:protein2genome:local gene 69623 71785 1243 + . gene_id 0 ; sequence GL50803_114469-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 69623 69777 . + . utg18_pilon exonerate:protein2genome:local exon 69623 69777 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local splice5 69778 69779 . + . intron_id 1 ; splice_site "AT" utg18_pilon exonerate:protein2genome:local intron 69778 69826 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 69825 69826 . + . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 69827 69958 . + . utg18_pilon exonerate:protein2genome:local exon 69827 69958 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 69959 69960 . + . intron_id 2 ; splice_site "GG" utg18_pilon exonerate:protein2genome:local intron 69959 70000 . + . intron_id 2 utg18_pilon exonerate:protein2genome:local splice3 69999 70000 . + . intron_id 1 ; splice_site "CG" utg18_pilon exonerate:protein2genome:local cds 70001 70357 . + . utg18_pilon exonerate:protein2genome:local exon 70001 70357 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 70358 70359 . + . intron_id 3 ; splice_site "GG" utg18_pilon exonerate:protein2genome:local intron 70358 70924 . + . intron_id 3 utg18_pilon exonerate:protein2genome:local splice3 70923 70924 . + . intron_id 2 ; splice_site "CG" utg18_pilon exonerate:protein2genome:local cds 70925 71077 . + . utg18_pilon exonerate:protein2genome:local exon 70925 71077 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 71078 71079 . + . intron_id 4 ; splice_site "GG" utg18_pilon exonerate:protein2genome:local intron 71078 71608 . + . intron_id 4 utg18_pilon exonerate:protein2genome:local splice3 71607 71608 . + . intron_id 3 ; splice_site "CG" utg18_pilon exonerate:protein2genome:local cds 71609 71785 . + . utg18_pilon exonerate:protein2genome:local exon 71609 71785 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 69623 71785 1243 + . alignment_id 0 ; Query GL50803_114469-t26_1-p1 ; Align 69623 4 90 ; Align 69715 34 3 ; Align 69718 36 60 ; Align 69827 56 132 ; Align 70001 100 357 ; Align 70925 219 153 ; Align 71609 270 177 utg265_pilon exonerate:protein2genome:local gene 556791 869136 1736 + . gene_id 0 ; sequence GL50803_114470-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 556791 557022 . + . utg265_pilon exonerate:protein2genome:local exon 556791 557022 . + . insertions 9 ; deletions 1 utg265_pilon exonerate:protein2genome:local splice5 557023 557024 . + . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 557023 715033 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 715032 715033 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 715034 715183 . + . utg265_pilon exonerate:protein2genome:local exon 715034 715183 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 715184 715185 . + . intron_id 2 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 715184 773155 . + . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 773154 773155 . + . intron_id 1 ; splice_site "TG" utg265_pilon exonerate:protein2genome:local cds 773156 773344 . + . utg265_pilon exonerate:protein2genome:local exon 773156 773344 . + . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 773345 773346 . + . intron_id 3 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 773345 773443 . + . intron_id 3 utg265_pilon exonerate:protein2genome:local splice3 773442 773443 . + . intron_id 2 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 773444 773794 . + . utg265_pilon exonerate:protein2genome:local exon 773444 773794 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 773795 773796 . + . intron_id 4 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 773795 774082 . + . intron_id 4 utg265_pilon exonerate:protein2genome:local splice3 774081 774082 . + . intron_id 3 ; splice_site "TG" utg265_pilon exonerate:protein2genome:local cds 774083 774802 . + . utg265_pilon exonerate:protein2genome:local exon 774083 774802 . + . insertions 6 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local splice5 774803 774804 . + . intron_id 5 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 774803 869016 . + . intron_id 5 utg265_pilon exonerate:protein2genome:local splice3 869015 869016 . + . intron_id 4 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 869017 869136 . + . utg265_pilon exonerate:protein2genome:local exon 869017 869136 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 556791 869136 1736 + . alignment_id 0 ; Query GL50803_114470-t26_1-p1 ; Align 556791 3 102 ; Align 556902 37 24 ; Align 556926 46 96 ; Align 715036 79 147 ; Align 773158 129 129 ; Align 773290 172 54 ; Align 773446 191 348 ; Align 774085 308 105 ; Align 774193 343 156 ; Align 774350 395 336 ; Align 774689 507 114 ; Align 869017 545 120 utg47_pilon exonerate:protein2genome:local gene 1509479 1622423 1646 + . gene_id 0 ; sequence GL50803_11448-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1509479 1510774 . + . utg47_pilon exonerate:protein2genome:local exon 1509479 1510774 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1510775 1510776 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1510775 1547804 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1547803 1547804 . + . intron_id 0 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 1547805 1547853 . + . utg47_pilon exonerate:protein2genome:local exon 1547805 1547853 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1547854 1547855 . + . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1547854 1622376 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1622375 1622376 . + . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1622377 1622423 . + . utg47_pilon exonerate:protein2genome:local exon 1622377 1622423 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1509479 1622423 1646 + . alignment_id 0 ; Query GL50803_11448-t26_1-p1 ; Align 1509479 5 1026 ; Align 1510505 349 270 ; Align 1547805 439 48 ; Align 1622379 456 45 utg47_pilon exonerate:protein2genome:local gene 1508286 1509332 1544 + . gene_id 0 ; sequence GL50803_11449-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1508286 1509332 . + . utg47_pilon exonerate:protein2genome:local exon 1508286 1509332 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1508286 1509332 1544 + . alignment_id 0 ; Query GL50803_11449-t26_1-p1 ; Align 1508286 1 459 ; Align 1508745 156 588 utg265_pilon exonerate:protein2genome:local gene 99245 100931 1063 + . gene_id 0 ; sequence GL50803_114495-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 99245 100237 . + . utg265_pilon exonerate:protein2genome:local exon 99245 100237 . + . insertions 15 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 100238 100239 . + . intron_id 1 ; splice_site "AT" utg265_pilon exonerate:protein2genome:local intron 100238 100594 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 100593 100594 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 100595 100794 . + . utg265_pilon exonerate:protein2genome:local exon 100595 100794 . + . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local splice5 100795 100796 . + . intron_id 2 ; splice_site "GC" utg265_pilon exonerate:protein2genome:local intron 100795 100828 . + . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 100827 100828 . + . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 100829 100931 . + . utg265_pilon exonerate:protein2genome:local exon 100829 100931 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 99245 100931 1063 + . alignment_id 0 ; Query GL50803_114495-t26_1-p1 ; Align 99245 1 438 ; Align 99698 147 540 ; Align 100595 327 69 ; Align 100664 354 129 ; Align 100830 398 102 utg265_pilon exonerate:protein2genome:local gene 665098 668298 4601 - . gene_id 0 ; sequence GL50803_114497-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 665098 668298 . - . utg265_pilon exonerate:protein2genome:local exon 665098 668298 . - . insertions 15 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 665098 668298 4601 - . alignment_id 0 ; Query GL50803_114497-t26_1-p1 ; Align 668299 1 2223 ; Align 666064 742 414 ; Align 665647 880 549 utg99_pilon exonerate:protein2genome:local gene 37117 42069 6542 + . gene_id 0 ; sequence GL50803_114498-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 37117 42069 . + . utg99_pilon exonerate:protein2genome:local exon 37117 42069 . + . insertions 6 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 37117 42069 6542 + . alignment_id 0 ; Query GL50803_114498-t26_1-p1 ; Align 37117 1 2151 ; Align 39271 718 1809 ; Align 41083 1321 987 utg47_pilon exonerate:protein2genome:local gene 1508148 1508285 118 - . gene_id 0 ; sequence GL50803_11450-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1508148 1508285 . - . utg47_pilon exonerate:protein2genome:local exon 1508148 1508285 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1508148 1508285 118 - . alignment_id 0 ; Query GL50803_11450-t26_1-p1 ; Align 1508286 2 33 ; Align 1508253 14 105 utg731_pilon exonerate:protein2genome:local gene 568885 1174582 1373 - . gene_id 0 ; sequence GL50803_114535-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1173765 1174582 . - . utg731_pilon exonerate:protein2genome:local exon 1173765 1174582 . - . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1173763 1173764 . - . intron_id 1 ; splice_site "GA" utg731_pilon exonerate:protein2genome:local intron 1173615 1173764 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1173615 1173616 . - . intron_id 0 ; splice_site "AA" utg731_pilon exonerate:protein2genome:local cds 1173098 1173614 . - . utg731_pilon exonerate:protein2genome:local exon 1173098 1173614 . - . insertions 3 ; deletions 4 utg731_pilon exonerate:protein2genome:local splice5 1173096 1173097 . - . intron_id 2 ; splice_site "CC" utg731_pilon exonerate:protein2genome:local intron 1172840 1173097 . - . intron_id 2 utg731_pilon exonerate:protein2genome:local splice3 1172840 1172841 . - . intron_id 1 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1172710 1172839 . - . utg731_pilon exonerate:protein2genome:local exon 1172710 1172839 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1172708 1172709 . - . intron_id 3 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1105336 1172709 . - . intron_id 3 utg731_pilon exonerate:protein2genome:local splice3 1105336 1105337 . - . intron_id 2 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local cds 1105062 1105335 . - . utg731_pilon exonerate:protein2genome:local exon 1105062 1105335 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1105060 1105061 . - . intron_id 4 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local intron 1089209 1105061 . - . intron_id 4 utg731_pilon exonerate:protein2genome:local splice3 1089209 1089210 . - . intron_id 3 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1088886 1089208 . - . utg731_pilon exonerate:protein2genome:local exon 1088886 1089208 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1088884 1088885 . - . intron_id 5 ; splice_site "GA" utg731_pilon exonerate:protein2genome:local intron 899816 1088885 . - . intron_id 5 utg731_pilon exonerate:protein2genome:local splice3 899816 899817 . - . intron_id 4 ; splice_site "GG" utg731_pilon exonerate:protein2genome:local cds 899548 899815 . - . utg731_pilon exonerate:protein2genome:local exon 899548 899815 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 899546 899547 . - . intron_id 6 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local intron 701390 899547 . - . intron_id 6 utg731_pilon exonerate:protein2genome:local splice3 701390 701391 . - . intron_id 5 ; splice_site "AA" utg731_pilon exonerate:protein2genome:local cds 701293 701389 . - . utg731_pilon exonerate:protein2genome:local exon 701293 701389 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 701291 701292 . - . intron_id 7 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local intron 679448 701292 . - . intron_id 7 utg731_pilon exonerate:protein2genome:local splice3 679448 679449 . - . intron_id 6 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 679300 679447 . - . utg731_pilon exonerate:protein2genome:local exon 679300 679447 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 679298 679299 . - . intron_id 8 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local intron 569196 679299 . - . intron_id 8 utg731_pilon exonerate:protein2genome:local splice3 569196 569197 . - . intron_id 7 ; splice_site "GG" utg731_pilon exonerate:protein2genome:local cds 568885 569195 . - . utg731_pilon exonerate:protein2genome:local exon 568885 569195 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 568885 1174582 1373 - . alignment_id 0 ; Query GL50803_114535-t26_1-p1 ; Align 1174583 16 207 ; Align 1174370 85 603 ; Align 1173614 287 60 ; Align 1173551 307 162 ; Align 1173389 363 126 ; Align 1173263 407 165 ; Align 1172840 462 129 ; Align 1105334 506 270 ; Align 1089208 597 321 ; Align 899814 705 264 ; Align 701389 794 96 ; Align 679448 826 147 ; Align 569194 876 309 utg64_pilon exonerate:protein2genome:local gene 582521 583543 1593 - . gene_id 0 ; sequence GL50803_114546-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 582521 583543 . - . utg64_pilon exonerate:protein2genome:local exon 582521 583543 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 582521 583543 1593 - . alignment_id 0 ; Query GL50803_114546-t26_1-p1 ; Align 583544 1 822 ; Align 582719 275 198 utg731_pilon exonerate:protein2genome:local gene 338904 339485 455 + . gene_id 0 ; sequence GL50803_114590-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 338904 339072 . + . utg731_pilon exonerate:protein2genome:local exon 338904 339072 . + . insertions 12 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 339073 339074 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 339073 339162 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 339161 339162 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 339163 339485 . + . utg731_pilon exonerate:protein2genome:local exon 339163 339485 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 338904 339485 455 + . alignment_id 0 ; Query GL50803_114590-t26_1-p1 ; Align 338904 30 60 ; Align 338976 50 96 ; Align 339165 83 321 utg731_pilon exonerate:protein2genome:local gene 332207 332788 455 - . gene_id 0 ; sequence GL50803_114590-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 332620 332788 . - . utg731_pilon exonerate:protein2genome:local exon 332620 332788 . - . insertions 12 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 332618 332619 . - . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 332530 332619 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 332530 332531 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 332207 332529 . - . utg731_pilon exonerate:protein2genome:local exon 332207 332529 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 332207 332788 455 - . alignment_id 0 ; Query GL50803_114590-t26_1-p1 ; Align 332789 30 60 ; Align 332717 50 96 ; Align 332528 83 321 utg349_pilon exonerate:protein2genome:local gene 1260944 1264702 6389 + . gene_id 0 ; sequence GL50803_114609-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1260944 1264702 . + . utg349_pilon exonerate:protein2genome:local exon 1260944 1264702 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1260944 1264702 6389 + . alignment_id 0 ; Query GL50803_114609-t26_1-p1 ; Align 1260944 1 3759 utg308_pilon exonerate:protein2genome:local gene 569638 837426 1989 + . gene_id 0 ; sequence GL50803_114617-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 569638 569674 . + . utg308_pilon exonerate:protein2genome:local exon 569638 569674 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 569675 569676 . + . intron_id 1 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 569675 573446 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 573445 573446 . + . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 573447 573872 . + . utg308_pilon exonerate:protein2genome:local exon 573447 573872 . + . insertions 3 ; deletions 4 utg308_pilon exonerate:protein2genome:local splice5 573873 573874 . + . intron_id 2 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 573873 723695 . + . intron_id 2 utg308_pilon exonerate:protein2genome:local splice3 723694 723695 . + . intron_id 1 ; splice_site "AT" utg308_pilon exonerate:protein2genome:local cds 723696 723812 . + . utg308_pilon exonerate:protein2genome:local exon 723696 723812 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 723813 723814 . + . intron_id 3 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 723813 835936 . + . intron_id 3 utg308_pilon exonerate:protein2genome:local splice3 835935 835936 . + . intron_id 2 ; splice_site "CG" utg308_pilon exonerate:protein2genome:local cds 835937 837426 . + . utg308_pilon exonerate:protein2genome:local exon 835937 837426 . + . insertions 3 ; deletions 0 ; frameshifts 3 utg308_pilon exonerate:protein2genome:local similarity 569638 837426 1989 + . alignment_id 0 ; Query GL50803_114617-t26_1-p1 ; Align 569638 114 36 ; Align 573449 127 138 ; Align 573587 175 42 ; Align 573629 191 150 ; Align 573782 241 90 ; Align 723698 272 114 ; Align 835939 311 465 ; Align 836405 466 156 ; Align 836564 518 276 ; Align 836841 610 468 ; Align 837310 766 117 utg731_pilon exonerate:protein2genome:local gene 781748 781927 256 + . gene_id 0 ; sequence GL50803_114622-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 781748 781927 . + . utg731_pilon exonerate:protein2genome:local exon 781748 781927 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 781748 781927 256 + . alignment_id 0 ; Query GL50803_114622-t26_1-p1 ; Align 781748 1 180 utg731_pilon exonerate:protein2genome:local gene 781579 782829 1730 - . gene_id 0 ; sequence GL50803_114623-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 781579 782829 . - . utg731_pilon exonerate:protein2genome:local exon 781579 782829 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 781579 782829 1730 - . alignment_id 0 ; Query GL50803_114623-t26_1-p1 ; Align 782830 1 1251 utg47_pilon exonerate:protein2genome:local gene 1917894 1919468 1419 - . gene_id 0 ; sequence GL50803_114625-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1917894 1919468 . - . utg47_pilon exonerate:protein2genome:local exon 1917894 1919468 . - . insertions 33 ; deletions 7 utg47_pilon exonerate:protein2genome:local similarity 1917894 1919468 1419 - . alignment_id 0 ; Query GL50803_114625-t26_1-p1 ; Align 1919469 17 162 ; Align 1919301 71 87 ; Align 1919214 104 192 ; Align 1919007 168 570 ; Align 1918425 358 45 ; Align 1918380 374 150 ; Align 1918230 426 336 utg349_pilon exonerate:protein2genome:local gene 1561083 1566148 6008 - . gene_id 0 ; sequence GL50803_114626-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1561083 1566148 . - . utg349_pilon exonerate:protein2genome:local exon 1561083 1566148 . - . insertions 42 ; deletions 11 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 1561083 1566148 6008 - . alignment_id 0 ; Query GL50803_114626-t26_1-p1 ; Align 1566149 1 174 ; Align 1565975 60 603 ; Align 1565366 261 504 ; Align 1564862 430 162 ; Align 1564700 489 33 ; Align 1564667 501 315 ; Align 1564343 606 39 ; Align 1564301 619 201 ; Align 1564097 686 54 ; Align 1564040 704 423 ; Align 1563611 845 78 ; Align 1563533 872 342 ; Align 1563190 986 135 ; Align 1563054 1031 90 ; Align 1562964 1062 333 ; Align 1562628 1173 210 ; Align 1562415 1243 207 ; Align 1562208 1313 84 ; Align 1562118 1341 1035 utg731_pilon exonerate:protein2genome:local gene 472193 474677 3170 - . gene_id 0 ; sequence GL50803_114636-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 472193 474677 . - . utg731_pilon exonerate:protein2genome:local exon 472193 474677 . - . insertions 3 ; deletions 2 ; frameshifts 4 utg731_pilon exonerate:protein2genome:local similarity 472193 474677 3170 - . alignment_id 0 ; Query GL50803_114636-t26_1-p1 ; Align 474678 1 375 ; Align 474301 127 72 ; Align 474229 152 99 ; Align 474128 185 453 ; Align 473672 336 1479 utg212_pilon exonerate:protein2genome:local gene 533901 535223 1460 + . gene_id 0 ; sequence GL50803_114651-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 533901 535223 . + . utg212_pilon exonerate:protein2genome:local exon 533901 535223 . + . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 533901 535223 1460 + . alignment_id 0 ; Query GL50803_114651-t26_1-p1 ; Align 533901 1 1269 ; Align 535173 424 51 utg212_pilon exonerate:protein2genome:local gene 580049 581371 1460 - . gene_id 0 ; sequence GL50803_114651-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 580049 581371 . - . utg212_pilon exonerate:protein2genome:local exon 580049 581371 . - . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 580049 581371 1460 - . alignment_id 0 ; Query GL50803_114651-t26_1-p1 ; Align 581372 1 1269 ; Align 580100 424 51 utg64_pilon exonerate:protein2genome:local gene 150848 479431 1629 + . gene_id 0 ; sequence GL50803_114653-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 150848 151262 . + . utg64_pilon exonerate:protein2genome:local exon 150848 151262 . + . insertions 3 ; deletions 2 utg64_pilon exonerate:protein2genome:local splice5 151263 151264 . + . intron_id 1 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local intron 151263 153995 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 153994 153995 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 153996 154147 . + . utg64_pilon exonerate:protein2genome:local exon 153996 154147 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 154148 154149 . + . intron_id 2 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 154148 280277 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 280276 280277 . + . intron_id 1 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local cds 280278 281355 . + . utg64_pilon exonerate:protein2genome:local exon 280278 281355 . + . insertions 24 ; deletions 3 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local splice5 281356 281357 . + . intron_id 3 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 281356 479289 . + . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 479288 479289 . + . intron_id 2 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 479290 479431 . + . utg64_pilon exonerate:protein2genome:local exon 479290 479431 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 150848 479431 1629 + . alignment_id 0 ; Query GL50803_114653-t26_1-p1 ; Align 150848 8 48 ; Align 150896 25 225 ; Align 151124 100 36 ; Align 151160 113 102 ; Align 153998 148 150 ; Align 280278 198 48 ; Align 280329 214 45 ; Align 280380 229 96 ; Align 280482 261 66 ; Align 280548 284 45 ; Align 280596 299 72 ; Align 280668 324 57 ; Align 280725 344 165 ; Align 280896 399 141 ; Align 281039 446 315 ; Align 479291 552 141 utg212_pilon exonerate:protein2genome:local gene 164371 165243 807 + . gene_id 0 ; sequence GL50803_114654-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 164371 165243 . + . utg212_pilon exonerate:protein2genome:local exon 164371 165243 . + . insertions 39 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 164371 165243 807 + . alignment_id 0 ; Query GL50803_114654-t26_1-p1 ; Align 164371 1 36 ; Align 164410 13 48 ; Align 164464 29 102 ; Align 164569 63 81 ; Align 164653 90 75 ; Align 164734 115 186 ; Align 164926 177 108 ; Align 165037 213 42 ; Align 165082 227 48 ; Align 165136 243 108 utg47_pilon exonerate:protein2genome:local gene 1888801 1888965 129 - . gene_id 0 ; sequence GL50803_114662-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1888801 1888965 . - . utg47_pilon exonerate:protein2genome:local exon 1888801 1888965 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1888801 1888965 129 - . alignment_id 0 ; Query GL50803_114662-t26_1-p1 ; Align 1888966 3 165 utg47_pilon exonerate:protein2genome:local gene 1873505 1874835 1934 + . gene_id 0 ; sequence GL50803_114670-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1873505 1874835 . + . utg47_pilon exonerate:protein2genome:local exon 1873505 1874835 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1873505 1874835 1934 + . alignment_id 0 ; Query GL50803_114670-t26_1-p1 ; Align 1873505 1 816 ; Align 1874322 274 48 ; Align 1874371 290 465 utg47_pilon exonerate:protein2genome:local gene 179703 589117 1196 - . gene_id 0 ; sequence GL50803_114671-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 588689 589117 . - . utg47_pilon exonerate:protein2genome:local exon 588689 589117 . - . insertions 3 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 588687 588688 . - . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 587703 588688 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 587703 587704 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 587482 587702 . - . utg47_pilon exonerate:protein2genome:local exon 587482 587702 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 587480 587481 . - . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 577120 587481 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 577120 577121 . - . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 577024 577119 . - . utg47_pilon exonerate:protein2genome:local exon 577024 577119 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 577022 577023 . - . intron_id 3 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 441312 577023 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 441312 441313 . - . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 441108 441311 . - . utg47_pilon exonerate:protein2genome:local exon 441108 441311 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 441106 441107 . - . intron_id 4 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 440262 441107 . - . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 440262 440263 . - . intron_id 3 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local cds 440024 440261 . - . utg47_pilon exonerate:protein2genome:local exon 440024 440261 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 440022 440023 . - . intron_id 5 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 438920 440023 . - . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 438920 438921 . - . intron_id 4 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 438764 438919 . - . utg47_pilon exonerate:protein2genome:local exon 438764 438919 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 438762 438763 . - . intron_id 6 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 438299 438763 . - . intron_id 6 utg47_pilon exonerate:protein2genome:local splice3 438299 438300 . - . intron_id 5 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 438085 438298 . - . utg47_pilon exonerate:protein2genome:local exon 438085 438298 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 438083 438084 . - . intron_id 7 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 298747 438084 . - . intron_id 7 utg47_pilon exonerate:protein2genome:local splice3 298747 298748 . - . intron_id 6 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local cds 298571 298746 . - . utg47_pilon exonerate:protein2genome:local exon 298571 298746 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 298569 298570 . - . intron_id 8 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 179808 298570 . - . intron_id 8 utg47_pilon exonerate:protein2genome:local splice3 179808 179809 . - . intron_id 7 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 179703 179807 . - . utg47_pilon exonerate:protein2genome:local exon 179703 179807 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 179703 589117 1196 - . alignment_id 0 ; Query GL50803_114671-t26_1-p1 ; Align 589118 16 66 ; Align 589049 38 90 ; Align 588959 70 270 ; Align 587703 160 219 ; Align 577119 234 93 ; Align 441311 266 201 ; Align 440261 334 237 ; Align 438920 413 156 ; Align 438299 465 213 ; Align 298745 537 174 ; Align 179808 595 105 utg349_pilon exonerate:protein2genome:local gene 1236505 1435690 1821 + . gene_id 0 ; sequence GL50803_114672-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1236505 1238125 . + . utg349_pilon exonerate:protein2genome:local exon 1236505 1238125 . + . insertions 21 ; deletions 10 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local splice5 1238126 1238127 . + . intron_id 1 ; splice_site "CG" utg349_pilon exonerate:protein2genome:local intron 1238126 1435581 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1435580 1435581 . + . intron_id 0 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 1435582 1435690 . + . utg349_pilon exonerate:protein2genome:local exon 1435582 1435690 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1236505 1435690 1821 + . alignment_id 0 ; Query GL50803_114672-t26_1-p1 ; Align 1236505 36 114 ; Align 1236625 74 414 ; Align 1237045 212 159 ; Align 1237206 265 111 ; Align 1237320 302 39 ; Align 1237359 316 54 ; Align 1237413 338 117 ; Align 1237533 377 201 ; Align 1237737 444 216 ; Align 1237953 517 36 ; Align 1237989 533 135 ; Align 1435583 579 108 utg64_pilon exonerate:protein2genome:local gene 83777 479431 2076 + . gene_id 0 ; sequence GL50803_114674-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 83777 83909 . + . utg64_pilon exonerate:protein2genome:local exon 83777 83909 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 83910 83911 . + . intron_id 1 ; splice_site "GA" utg64_pilon exonerate:protein2genome:local intron 83910 150761 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 150760 150761 . + . intron_id 0 ; splice_site "TG" utg64_pilon exonerate:protein2genome:local cds 150762 151262 . + . utg64_pilon exonerate:protein2genome:local exon 150762 151262 . + . insertions 3 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 151263 151264 . + . intron_id 2 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local intron 151263 153995 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 153994 153995 . + . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 153996 154392 . + . utg64_pilon exonerate:protein2genome:local exon 153996 154392 . + . insertions 0 ; deletions 2 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local splice5 154393 154394 . + . intron_id 3 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 154393 280476 . + . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 280475 280476 . + . intron_id 2 ; splice_site "TG" utg64_pilon exonerate:protein2genome:local cds 280477 281343 . + . utg64_pilon exonerate:protein2genome:local exon 280477 281343 . + . insertions 3 ; deletions 1 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local splice5 281344 281345 . + . intron_id 4 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 281344 479184 . + . intron_id 4 utg64_pilon exonerate:protein2genome:local splice3 479183 479184 . + . intron_id 3 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 479185 479431 . + . utg64_pilon exonerate:protein2genome:local exon 479185 479431 . + . insertions 3 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 83777 479431 2076 + . alignment_id 0 ; Query GL50803_114674-t26_1-p1 ; Align 83777 4 132 ; Align 150764 49 357 ; Align 151124 168 36 ; Align 151160 181 102 ; Align 153998 216 81 ; Align 154079 244 126 ; Align 154206 286 24 ; Align 154230 295 162 ; Align 280479 350 108 ; Align 280590 386 438 ; Align 281030 532 3 ; Align 281033 534 309 ; Align 479186 638 3 ; Align 479192 639 96 ; Align 479288 673 144 utg11_pilon exonerate:protein2genome:local gene 232434 232607 271 + . gene_id 0 ; sequence GL50803_114684-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 232434 232607 . + . utg11_pilon exonerate:protein2genome:local exon 232434 232607 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 232434 232607 271 + . alignment_id 0 ; Query GL50803_114684-t26_1-p1 ; Align 232434 1 174 utg731_pilon exonerate:protein2genome:local gene 1117066 1120944 4548 + . gene_id 0 ; sequence GL50803_114698-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1117066 1120944 . + . utg731_pilon exonerate:protein2genome:local exon 1117066 1120944 . + . insertions 0 ; deletions 8 utg731_pilon exonerate:protein2genome:local similarity 1117066 1120944 4548 + . alignment_id 0 ; Query GL50803_114698-t26_1-p1 ; Align 1117066 30 1800 ; Align 1118866 633 483 ; Align 1119349 797 51 ; Align 1119400 816 1545 utg265_pilon exonerate:protein2genome:local gene 553957 1095753 1728 + . gene_id 0 ; sequence GL50803_11470-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 553957 554215 . + . utg265_pilon exonerate:protein2genome:local exon 553957 554215 . + . insertions 3 ; deletions 2 utg265_pilon exonerate:protein2genome:local splice5 554216 554217 . + . intron_id 1 ; splice_site "GC" utg265_pilon exonerate:protein2genome:local intron 554216 588359 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 588358 588359 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 588360 588561 . + . utg265_pilon exonerate:protein2genome:local exon 588360 588561 . + . insertions 3 ; deletions 5 utg265_pilon exonerate:protein2genome:local splice5 588562 588563 . + . intron_id 2 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 588562 714268 . + . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 714267 714268 . + . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 714269 714594 . + . utg265_pilon exonerate:protein2genome:local exon 714269 714594 . + . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 714595 714596 . + . intron_id 3 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 714595 868621 . + . intron_id 3 utg265_pilon exonerate:protein2genome:local splice3 868620 868621 . + . intron_id 2 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 868622 868715 . + . utg265_pilon exonerate:protein2genome:local exon 868622 868715 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 868716 868717 . + . intron_id 4 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local intron 868716 1027663 . + . intron_id 4 utg265_pilon exonerate:protein2genome:local splice3 1027662 1027663 . + . intron_id 3 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 1027664 1028505 . + . utg265_pilon exonerate:protein2genome:local exon 1027664 1028505 . + . insertions 9 ; deletions 4 utg265_pilon exonerate:protein2genome:local splice5 1028506 1028507 . + . intron_id 5 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 1028506 1095610 . + . intron_id 5 utg265_pilon exonerate:protein2genome:local splice3 1095609 1095610 . + . intron_id 4 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 1095611 1095753 . + . utg265_pilon exonerate:protein2genome:local exon 1095611 1095753 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 553957 1095753 1728 + . alignment_id 0 ; Query GL50803_11470-t26_1-p1 ; Align 553957 47 57 ; Align 554017 66 147 ; Align 554164 117 51 ; Align 588362 135 30 ; Align 588392 147 54 ; Align 588446 167 18 ; Align 588464 174 69 ; Align 588536 197 24 ; Align 714270 206 114 ; Align 714387 244 207 ; Align 868624 314 90 ; Align 1027665 345 99 ; Align 1027767 378 57 ; Align 1027824 398 405 ; Align 1028235 533 45 ; Align 1028280 550 177 ; Align 1028457 610 48 ; Align 1095613 627 141 utg265_pilon exonerate:protein2genome:local gene 466485 470015 3889 + . gene_id 0 ; sequence GL50803_114751-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 466485 470015 . + . utg265_pilon exonerate:protein2genome:local exon 466485 470015 . + . insertions 27 ; deletions 8 utg265_pilon exonerate:protein2genome:local similarity 466485 470015 3889 + . alignment_id 0 ; Query GL50803_114751-t26_1-p1 ; Align 466485 1 1164 ; Align 467664 389 51 ; Align 467718 406 363 ; Align 468081 531 303 ; Align 468384 633 762 ; Align 469146 888 42 ; Align 469188 904 348 ; Align 469545 1020 471 utg265_pilon exonerate:protein2genome:local gene 711302 867247 2727 - . gene_id 0 ; sequence GL50803_114773-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 866149 867247 . - . utg265_pilon exonerate:protein2genome:local exon 866149 867247 . - . insertions 3 ; deletions 1 utg265_pilon exonerate:protein2genome:local splice5 866147 866148 . - . intron_id 1 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local intron 712120 866148 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 712120 712121 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 711302 712119 . - . utg265_pilon exonerate:protein2genome:local exon 711302 712119 . - . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 711302 867247 2727 - . alignment_id 0 ; Query GL50803_114773-t26_1-p1 ; Align 867248 1 297 ; Align 866948 100 105 ; Align 866843 136 693 ; Align 712118 368 33 ; Align 712082 379 201 ; Align 711878 446 576 utg18_pilon exonerate:protein2genome:local gene 405810 408236 3652 - . gene_id 0 ; sequence GL50803_114776-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 405810 408236 . - . utg18_pilon exonerate:protein2genome:local exon 405810 408236 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 405810 408236 3652 - . alignment_id 0 ; Query GL50803_114776-t26_1-p1 ; Align 408237 15 2427 utg349_pilon exonerate:protein2genome:local gene 1420989 1422956 2822 - . gene_id 0 ; sequence GL50803_114777-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1420989 1422956 . - . utg349_pilon exonerate:protein2genome:local exon 1420989 1422956 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1420989 1422956 2822 - . alignment_id 0 ; Query GL50803_114777-t26_1-p1 ; Align 1422957 1 1968 utg11_pilon exonerate:protein2genome:local gene 1807823 1808649 704 - . gene_id 0 ; sequence GL50803_114778-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1807966 1808649 . - . utg11_pilon exonerate:protein2genome:local exon 1807966 1808649 . - . insertions 18 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1807964 1807965 . - . intron_id 1 ; splice_site "TT" utg11_pilon exonerate:protein2genome:local intron 1807934 1807965 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1807934 1807935 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1807823 1807933 . - . utg11_pilon exonerate:protein2genome:local exon 1807823 1807933 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1807823 1808649 704 - . alignment_id 0 ; Query GL50803_114778-t26_1-p1 ; Align 1808650 1 453 ; Align 1808194 152 63 ; Align 1808125 173 57 ; Align 1808062 192 24 ; Align 1808035 200 69 ; Align 1807934 223 6 ; Align 1807928 226 105 utg18_pilon exonerate:protein2genome:local gene 281388 451338 601 - . gene_id 0 ; sequence GL50803_114779-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 450769 451338 . - . utg18_pilon exonerate:protein2genome:local exon 450769 451338 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local splice5 450767 450768 . - . intron_id 1 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 281474 450768 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 281474 281475 . - . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 281388 281473 . - . utg18_pilon exonerate:protein2genome:local exon 281388 281473 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 281388 451338 601 - . alignment_id 0 ; Query GL50803_114779-t26_1-p1 ; Align 451339 3 69 ; Align 451268 26 498 ; Align 281472 193 84 utg364_pilon exonerate:protein2genome:local gene 63615 64499 1460 - . gene_id 0 ; sequence GL50803_114787-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 63615 64499 . - . utg364_pilon exonerate:protein2genome:local exon 63615 64499 . - . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 63615 64499 1460 - . alignment_id 0 ; Query GL50803_114787-t26_1-p1 ; Align 64500 1 885 utg364_pilon exonerate:protein2genome:local gene 41943 44968 4103 + . gene_id 0 ; sequence GL50803_114793-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 41943 44968 . + . utg364_pilon exonerate:protein2genome:local exon 41943 44968 . + . insertions 3 ; deletions 2 ; frameshifts 2 utg364_pilon exonerate:protein2genome:local similarity 41943 44968 4103 + . alignment_id 0 ; Query GL50803_114793-t26_1-p1 ; Align 41943 1 309 ; Align 42254 105 510 ; Align 42764 276 474 ; Align 43241 434 1728 utg11_pilon exonerate:protein2genome:local gene 707703 708101 348 - . gene_id 0 ; sequence GL50803_114797-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 707703 708101 . - . utg11_pilon exonerate:protein2genome:local exon 707703 708101 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 707703 708101 348 - . alignment_id 0 ; Query GL50803_114797-t26_1-p1 ; Align 708102 46 399 utg265_pilon exonerate:protein2genome:local gene 479732 869163 1285 + . gene_id 0 ; sequence GL50803_114813-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 479732 480323 . + . utg265_pilon exonerate:protein2genome:local exon 479732 480323 . + . insertions 0 ; deletions 13 utg265_pilon exonerate:protein2genome:local splice5 480324 480325 . + . intron_id 1 ; splice_site "GC" utg265_pilon exonerate:protein2genome:local intron 480324 480817 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 480816 480817 . + . intron_id 0 ; splice_site "CC" utg265_pilon exonerate:protein2genome:local cds 480818 480843 . + . utg265_pilon exonerate:protein2genome:local exon 480818 480843 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 480844 480845 . + . intron_id 2 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 480844 557528 . + . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 557527 557528 . + . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 557529 558183 . + . utg265_pilon exonerate:protein2genome:local exon 557529 558183 . + . insertions 18 ; deletions 2 utg265_pilon exonerate:protein2genome:local splice5 558184 558185 . + . intron_id 3 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 558184 693228 . + . intron_id 3 utg265_pilon exonerate:protein2genome:local splice3 693227 693228 . + . intron_id 2 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 693229 693285 . + . utg265_pilon exonerate:protein2genome:local exon 693229 693285 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 693286 693287 . + . intron_id 4 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 693286 774647 . + . intron_id 4 utg265_pilon exonerate:protein2genome:local splice3 774646 774647 . + . intron_id 3 ; splice_site "TG" utg265_pilon exonerate:protein2genome:local cds 774648 774812 . + . utg265_pilon exonerate:protein2genome:local exon 774648 774812 . + . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 774813 774814 . + . intron_id 5 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 774813 869023 . + . intron_id 5 utg265_pilon exonerate:protein2genome:local splice3 869022 869023 . + . intron_id 4 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local cds 869024 869163 . + . utg265_pilon exonerate:protein2genome:local exon 869024 869163 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 479732 869163 1285 + . alignment_id 0 ; Query GL50803_114813-t26_1-p1 ; Align 479732 29 114 ; Align 479846 71 108 ; Align 479954 111 108 ; Align 480062 151 126 ; Align 480188 194 135 ; Align 480820 240 24 ; Align 557529 248 72 ; Align 557604 272 33 ; Align 557637 284 54 ; Align 557691 303 27 ; Align 557724 312 24 ; Align 557751 320 156 ; Align 557910 372 51 ; Align 557964 389 219 ; Align 693231 463 54 ; Align 774650 482 36 ; Align 774689 494 123 ; Align 869026 536 138 utg47_pilon exonerate:protein2genome:local gene 429020 430756 2749 + . gene_id 0 ; sequence GL50803_114815-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 429020 430756 . + . utg47_pilon exonerate:protein2genome:local exon 429020 430756 . + . insertions 0 ; deletions 1 ; frameshifts 3 utg47_pilon exonerate:protein2genome:local similarity 429020 430756 2749 + . alignment_id 0 ; Query GL50803_114815-t26_1-p1 ; Align 429020 12 1194 ; Align 430215 410 195 ; Align 430412 476 345 utg47_pilon exonerate:protein2genome:local gene 422887 423006 114 - . gene_id 0 ; sequence GL50803_114820-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 422887 423006 . - . utg47_pilon exonerate:protein2genome:local exon 422887 423006 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 422887 423006 114 - . alignment_id 0 ; Query GL50803_114820-t26_1-p1 ; Align 423007 9 120 utg47_pilon exonerate:protein2genome:local gene 293089 297447 6015 + . gene_id 0 ; sequence GL50803_114829-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 293089 297447 . + . utg47_pilon exonerate:protein2genome:local exon 293089 297447 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 293089 297447 6015 + . alignment_id 0 ; Query GL50803_114829-t26_1-p1 ; Align 293089 1 4359 utg11_pilon exonerate:protein2genome:local gene 534623 537079 2816 + . gene_id 0 ; sequence GL50803_114852-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 534623 537079 . + . utg11_pilon exonerate:protein2genome:local exon 534623 537079 . + . insertions 39 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 534623 537079 2816 + . alignment_id 0 ; Query GL50803_114852-t26_1-p1 ; Align 534623 1 147 ; Align 534773 50 420 ; Align 535196 190 45 ; Align 535247 205 255 ; Align 535508 290 63 ; Align 535574 311 261 ; Align 535844 398 27 ; Align 535877 407 480 ; Align 536360 567 720 utg18_pilon exonerate:protein2genome:local gene 306089 306277 199 - . gene_id 0 ; sequence GL50803_114857-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 306089 306277 . - . utg18_pilon exonerate:protein2genome:local exon 306089 306277 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 306089 306277 199 - . alignment_id 0 ; Query GL50803_114857-t26_1-p1 ; Align 306278 1 189 utg18_pilon exonerate:protein2genome:local gene 311073 311237 148 - . gene_id 0 ; sequence GL50803_114858-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 311073 311237 . - . utg18_pilon exonerate:protein2genome:local exon 311073 311237 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 311073 311237 148 - . alignment_id 0 ; Query GL50803_114858-t26_1-p1 ; Align 311238 1 165 utg349_pilon exonerate:protein2genome:local gene 234187 235002 1310 - . gene_id 0 ; sequence GL50803_11486-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 234187 235002 . - . utg349_pilon exonerate:protein2genome:local exon 234187 235002 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 234187 235002 1310 - . alignment_id 0 ; Query GL50803_11486-t26_1-p1 ; Align 235003 20 816 utg349_pilon exonerate:protein2genome:local gene 235090 236802 2592 - . gene_id 0 ; sequence GL50803_11487-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 235090 236802 . - . utg349_pilon exonerate:protein2genome:local exon 235090 236802 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 235090 236802 2592 - . alignment_id 0 ; Query GL50803_11487-t26_1-p1 ; Align 236803 1 1713 utg18_pilon exonerate:protein2genome:local gene 211979 212143 230 - . gene_id 0 ; sequence GL50803_114876-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 211979 212143 . - . utg18_pilon exonerate:protein2genome:local exon 211979 212143 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 211979 212143 230 - . alignment_id 0 ; Query GL50803_114876-t26_1-p1 ; Align 212144 1 165 utg349_pilon exonerate:protein2genome:local gene 236855 238408 2136 + . gene_id 0 ; sequence GL50803_11488-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 236855 238408 . + . utg349_pilon exonerate:protein2genome:local exon 236855 238408 . + . insertions 0 ; deletions 1 ; frameshifts 3 utg349_pilon exonerate:protein2genome:local similarity 236855 238408 2136 + . alignment_id 0 ; Query GL50803_11488-t26_1-p1 ; Align 236855 1 642 ; Align 237499 215 3 ; Align 237502 217 552 ; Align 238055 401 354 utg18_pilon exonerate:protein2genome:local gene 188909 191212 3603 + . gene_id 0 ; sequence GL50803_114885-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 188909 191212 . + . utg18_pilon exonerate:protein2genome:local exon 188909 191212 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 188909 191212 3603 + . alignment_id 0 ; Query GL50803_114885-t26_1-p1 ; Align 188909 1 2304 utg11_pilon exonerate:protein2genome:local gene 215632 215988 463 - . gene_id 0 ; sequence GL50803_114888-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 215632 215988 . - . utg11_pilon exonerate:protein2genome:local exon 215632 215988 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 215632 215988 463 - . alignment_id 0 ; Query GL50803_114888-t26_1-p1 ; Align 215989 2 357 utg349_pilon exonerate:protein2genome:local gene 853669 856182 3367 + . gene_id 0 ; sequence GL50803_114891-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 853669 856182 . + . utg349_pilon exonerate:protein2genome:local exon 853669 856182 . + . insertions 30 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 853669 856182 3367 + . alignment_id 0 ; Query GL50803_114891-t26_1-p1 ; Align 853669 4 390 ; Align 854062 134 135 ; Align 854200 179 141 ; Align 854356 226 525 ; Align 854884 401 633 ; Align 855517 613 600 ; Align 856123 813 60 utg308_pilon exonerate:protein2genome:local gene 826757 827715 868 + . gene_id 0 ; sequence GL50803_114892-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 826757 827358 . + . utg308_pilon exonerate:protein2genome:local exon 826757 827358 . + . insertions 6 ; deletions 0 ; frameshifts 3 utg308_pilon exonerate:protein2genome:local splice5 827359 827360 . + . intron_id 1 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 827359 827418 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 827417 827418 . + . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 827419 827715 . + . utg308_pilon exonerate:protein2genome:local exon 827419 827715 . + . insertions 0 ; deletions 0 ; frameshifts 5 utg308_pilon exonerate:protein2genome:local similarity 826757 827715 868 + . alignment_id 0 ; Query GL50803_114892-t26_1-p1 ; Align 826757 1 231 ; Align 826991 78 18 ; Align 827011 84 45 ; Align 827057 99 150 ; Align 827210 149 147 ; Align 827420 199 60 ; Align 827481 219 33 ; Align 827516 230 153 ; Align 827671 281 45 utg731_pilon exonerate:protein2genome:local gene 69608 70566 868 + . gene_id 0 ; sequence GL50803_114892-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 69608 70209 . + . utg731_pilon exonerate:protein2genome:local exon 69608 70209 . + . insertions 6 ; deletions 0 ; frameshifts 3 utg731_pilon exonerate:protein2genome:local splice5 70210 70211 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 70210 70269 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 70268 70269 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 70270 70566 . + . utg731_pilon exonerate:protein2genome:local exon 70270 70566 . + . insertions 0 ; deletions 0 ; frameshifts 5 utg731_pilon exonerate:protein2genome:local similarity 69608 70566 868 + . alignment_id 0 ; Query GL50803_114892-t26_1-p1 ; Align 69608 1 231 ; Align 69842 78 18 ; Align 69862 84 45 ; Align 69908 99 150 ; Align 70061 149 147 ; Align 70271 199 60 ; Align 70332 219 33 ; Align 70367 230 138 ; Align 70506 276 27 ; Align 70534 285 33 utg11_pilon exonerate:protein2genome:local gene 1390221 1390379 145 + . gene_id 0 ; sequence GL50803_114903-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1390221 1390379 . + . utg11_pilon exonerate:protein2genome:local exon 1390221 1390379 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1390221 1390379 145 + . alignment_id 0 ; Query GL50803_114903-t26_1-p1 ; Align 1390221 1 159 utg11_pilon exonerate:protein2genome:local gene 1365914 1369672 5320 + . gene_id 0 ; sequence GL50803_114912-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1365914 1369672 . + . utg11_pilon exonerate:protein2genome:local exon 1365914 1369672 . + . insertions 9 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1365914 1369672 5320 + . alignment_id 0 ; Query GL50803_114912-t26_1-p1 ; Align 1365914 1 1590 ; Align 1367504 533 1212 ; Align 1368725 937 948 utg265_pilon exonerate:protein2genome:local gene 711302 867247 2722 - . gene_id 0 ; sequence GL50803_114915-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 866149 867247 . - . utg265_pilon exonerate:protein2genome:local exon 866149 867247 . - . insertions 3 ; deletions 1 utg265_pilon exonerate:protein2genome:local splice5 866147 866148 . - . intron_id 1 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local intron 712120 866148 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 712120 712121 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 711302 712119 . - . utg265_pilon exonerate:protein2genome:local exon 711302 712119 . - . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 711302 867247 2722 - . alignment_id 0 ; Query GL50803_114915-t26_1-p1 ; Align 867248 1 294 ; Align 866951 99 108 ; Align 866843 136 693 ; Align 712118 368 33 ; Align 712082 379 201 ; Align 711878 446 576 utg11_pilon exonerate:protein2genome:local gene 960765 966761 8864 + . gene_id 0 ; sequence GL50803_114921-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 960765 966761 . + . utg11_pilon exonerate:protein2genome:local exon 960765 966761 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 960765 966761 8864 + . alignment_id 0 ; Query GL50803_114921-t26_1-p1 ; Align 960765 1 5997 utg349_pilon exonerate:protein2genome:local gene 240475 244379 4375 - . gene_id 0 ; sequence GL50803_11493-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 242325 244379 . - . utg349_pilon exonerate:protein2genome:local exon 242325 244379 . - . insertions 6 ; deletions 14 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local splice5 242323 242324 . - . intron_id 1 ; splice_site "GA" utg349_pilon exonerate:protein2genome:local intron 242295 242324 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 242295 242296 . - . intron_id 0 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 241624 242294 . - . utg349_pilon exonerate:protein2genome:local exon 241624 242294 . - . insertions 6 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 241622 241623 . - . intron_id 2 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local intron 241591 241623 . - . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 241591 241592 . - . intron_id 1 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 240475 241590 . - . utg349_pilon exonerate:protein2genome:local exon 240475 241590 . - . insertions 6 ; deletions 1 ; frameshifts 4 utg349_pilon exonerate:protein2genome:local similarity 240475 244379 4375 - . alignment_id 0 ; Query GL50803_11493-t26_1-p1 ; Align 244380 27 57 ; Align 244322 46 423 ; Align 243899 188 84 ; Align 243812 216 378 ; Align 243434 344 186 ; Align 243248 407 156 ; Align 243092 463 57 ; Align 243032 482 102 ; Align 242930 520 537 ; Align 242393 701 66 ; Align 242294 724 501 ; Align 241793 892 48 ; Align 241739 908 114 ; Align 241589 947 27 ; Align 241562 957 240 ; Align 241316 1037 9 ; Align 241303 1040 828 utg308_pilon exonerate:protein2genome:local gene 835036 837447 2597 + . gene_id 0 ; sequence GL50803_114930-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 835036 837447 . + . utg308_pilon exonerate:protein2genome:local exon 835036 837447 . + . insertions 21 ; deletions 4 ; frameshifts 3 utg308_pilon exonerate:protein2genome:local similarity 835036 837447 2597 + . alignment_id 0 ; Query GL50803_114930-t26_1-p1 ; Align 835036 1 327 ; Align 835372 110 483 ; Align 835855 275 189 ; Align 836050 338 192 ; Align 836245 402 153 ; Align 836399 453 162 ; Align 836564 507 276 ; Align 836841 599 471 ; Align 837313 756 135 utg11_pilon exonerate:protein2genome:local gene 921750 924062 3452 - . gene_id 0 ; sequence GL50803_114937-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 921750 924062 . - . utg11_pilon exonerate:protein2genome:local exon 921750 924062 . - . insertions 3 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 921750 924062 3452 - . alignment_id 0 ; Query GL50803_114937-t26_1-p1 ; Align 924063 1 993 ; Align 923070 333 903 ; Align 922167 635 207 ; Align 921957 704 207 utg349_pilon exonerate:protein2genome:local gene 244501 245913 2354 - . gene_id 0 ; sequence GL50803_11495-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 244501 245913 . - . utg349_pilon exonerate:protein2genome:local exon 244501 245913 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 244501 245913 2354 - . alignment_id 0 ; Query GL50803_11495-t26_1-p1 ; Align 245914 1 1413 utg349_pilon exonerate:protein2genome:local gene 246273 249071 3929 + . gene_id 0 ; sequence GL50803_11497-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 246273 249071 . + . utg349_pilon exonerate:protein2genome:local exon 246273 249071 . + . insertions 12 ; deletions 8 utg349_pilon exonerate:protein2genome:local similarity 246273 249071 3929 + . alignment_id 0 ; Query GL50803_11497-t26_1-p1 ; Align 246273 1 675 ; Align 246948 228 615 ; Align 247563 437 51 ; Align 247614 455 1134 ; Align 248748 834 105 ; Align 248865 869 207 utg11_pilon exonerate:protein2genome:local gene 442468 648225 570 - . gene_id 0 ; sequence GL50803_114973-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 648078 648225 . - . utg11_pilon exonerate:protein2genome:local exon 648078 648225 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local splice5 648076 648077 . - . intron_id 1 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 644512 648077 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 644512 644513 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 644166 644511 . - . utg11_pilon exonerate:protein2genome:local exon 644166 644511 . - . insertions 0 ; deletions 0 ; frameshifts 4 utg11_pilon exonerate:protein2genome:local splice5 644164 644165 . - . intron_id 2 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 491601 644165 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 491601 491602 . - . intron_id 1 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local cds 491458 491600 . - . utg11_pilon exonerate:protein2genome:local exon 491458 491600 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 491456 491457 . - . intron_id 3 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 442598 491457 . - . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 442598 442599 . - . intron_id 2 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 442468 442597 . - . utg11_pilon exonerate:protein2genome:local exon 442468 442597 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 442468 648225 570 - . alignment_id 0 ; Query GL50803_114973-t26_1-p1 ; Align 648226 2 78 ; Align 648147 28 69 ; Align 644512 51 48 ; Align 644463 67 33 ; Align 644428 78 87 ; Align 644340 107 174 ; Align 491601 165 141 ; Align 442597 213 57 ; Align 442537 232 69 utg349_pilon exonerate:protein2genome:local gene 1325702 1325872 173 - . gene_id 0 ; sequence GL50803_114974-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1325702 1325872 . - . utg349_pilon exonerate:protein2genome:local exon 1325702 1325872 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1325702 1325872 173 - . alignment_id 0 ; Query GL50803_114974-t26_1-p1 ; Align 1325873 1 171 utg349_pilon exonerate:protein2genome:local gene 1161214 1161372 118 + . gene_id 0 ; sequence GL50803_114988-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1161214 1161372 . + . utg349_pilon exonerate:protein2genome:local exon 1161214 1161372 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1161214 1161372 118 + . alignment_id 0 ; Query GL50803_114988-t26_1-p1 ; Align 1161214 1 159 utg349_pilon exonerate:protein2genome:local gene 249328 250155 1301 + . gene_id 0 ; sequence GL50803_11499-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 249328 250155 . + . utg349_pilon exonerate:protein2genome:local exon 249328 250155 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 249328 250155 1301 + . alignment_id 0 ; Query GL50803_11499-t26_1-p1 ; Align 249328 9 828 utg308_pilon exonerate:protein2genome:local gene 40051 44948 2534 + . gene_id 0 ; sequence GL50803_114991-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 40051 43753 . + . utg308_pilon exonerate:protein2genome:local exon 40051 43753 . + . insertions 96 ; deletions 20 ; frameshifts 5 utg308_pilon exonerate:protein2genome:local splice5 43754 43755 . + . intron_id 1 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 43754 44419 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 44418 44419 . + . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 44420 44948 . + . utg308_pilon exonerate:protein2genome:local exon 44420 44948 . + . insertions 3 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 40051 44948 2534 + . alignment_id 0 ; Query GL50803_114991-t26_1-p1 ; Align 40051 1 192 ; Align 40243 68 165 ; Align 40414 123 81 ; Align 40495 151 72 ; Align 40573 175 27 ; Align 40603 184 213 ; Align 40825 255 255 ; Align 41083 340 246 ; Align 41332 422 36 ; Align 41368 435 84 ; Align 41452 467 153 ; Align 41608 518 15 ; Align 41626 523 228 ; Align 41859 599 27 ; Align 41889 608 180 ; Align 42069 669 9 ; Align 42078 673 9 ; Align 42087 678 24 ; Align 42111 687 42 ; Align 42156 701 111 ; Align 42267 739 105 ; Align 42378 774 183 ; Align 42564 835 141 ; Align 42705 883 153 ; Align 42858 935 123 ; Align 42987 976 138 ; Align 43128 1022 60 ; Align 43188 1043 42 ; Align 43230 1058 60 ; Align 43293 1078 69 ; Align 43365 1101 24 ; Align 43392 1109 60 ; Align 43461 1129 60 ; Align 43524 1149 93 ; Align 43617 1181 51 ; Align 43677 1198 63 ; Align 43746 1219 6 ; Align 44421 1222 75 ; Align 44496 1250 210 ; Align 44709 1320 240 utg349_pilon exonerate:protein2genome:local gene 1139944 1140111 127 - . gene_id 0 ; sequence GL50803_114998-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1139944 1140111 . - . utg349_pilon exonerate:protein2genome:local exon 1139944 1140111 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1139944 1140111 127 - . alignment_id 0 ; Query GL50803_114998-t26_1-p1 ; Align 1140112 1 168 utg349_pilon exonerate:protein2genome:local gene 993077 993196 113 + . gene_id 0 ; sequence GL50803_115036-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 993077 993196 . + . utg349_pilon exonerate:protein2genome:local exon 993077 993196 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 993077 993196 113 + . alignment_id 0 ; Query GL50803_115036-t26_1-p1 ; Align 993077 3 120 utg349_pilon exonerate:protein2genome:local gene 992070 992270 201 + . gene_id 0 ; sequence GL50803_115038-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 992070 992270 . + . utg349_pilon exonerate:protein2genome:local exon 992070 992270 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 992070 992270 201 + . alignment_id 0 ; Query GL50803_115038-t26_1-p1 ; Align 992070 1 201 utg47_pilon exonerate:protein2genome:local gene 1786650 2029080 1334 + . gene_id 0 ; sequence GL50803_115047-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1786650 1787232 . + . utg47_pilon exonerate:protein2genome:local exon 1786650 1787232 . + . insertions 0 ; deletions 12 utg47_pilon exonerate:protein2genome:local splice5 1787233 1787234 . + . intron_id 1 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 1787233 1850668 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1850667 1850668 . + . intron_id 0 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 1850669 1850822 . + . utg47_pilon exonerate:protein2genome:local exon 1850669 1850822 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1850823 1850824 . + . intron_id 2 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local intron 1850823 1922317 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1922316 1922317 . + . intron_id 1 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 1922318 1922900 . + . utg47_pilon exonerate:protein2genome:local exon 1922318 1922900 . + . insertions 3 ; deletions 5 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local splice5 1922901 1922902 . + . intron_id 3 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 1922901 2028908 . + . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 2028907 2028908 . + . intron_id 2 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 2028909 2029080 . + . utg47_pilon exonerate:protein2genome:local exon 2028909 2029080 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1786650 2029080 1334 + . alignment_id 0 ; Query GL50803_115047-t26_1-p1 ; Align 1786650 76 123 ; Align 1786773 120 108 ; Align 1786881 159 108 ; Align 1786989 198 108 ; Align 1787097 237 135 ; Align 1850671 283 120 ; Align 1850794 323 27 ; Align 1922319 333 138 ; Align 1922457 381 30 ; Align 1922488 391 72 ; Align 1922563 415 231 ; Align 1922794 493 39 ; Align 1922833 508 66 ; Align 2028910 531 171 utg349_pilon exonerate:protein2genome:local gene 939638 944434 7316 + . gene_id 0 ; sequence GL50803_115052-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 939638 944434 . + . utg349_pilon exonerate:protein2genome:local exon 939638 944434 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 939638 944434 7316 + . alignment_id 0 ; Query GL50803_115052-t26_1-p1 ; Align 939638 1 3045 ; Align 942686 1016 1749 utg349_pilon exonerate:protein2genome:local gene 915479 918313 3830 + . gene_id 0 ; sequence GL50803_115054-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 915479 918313 . + . utg349_pilon exonerate:protein2genome:local exon 915479 918313 . + . insertions 6 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 915479 918313 3830 + . alignment_id 0 ; Query GL50803_115054-t26_1-p1 ; Align 915479 1 1857 ; Align 917339 620 687 ; Align 918029 849 120 ; Align 918149 893 165 utg265_pilon exonerate:protein2genome:local gene 1031388 1095744 4711 + . gene_id 0 ; sequence GL50803_115066-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 1031388 1034705 . + . utg265_pilon exonerate:protein2genome:local exon 1031388 1034705 . + . insertions 12 ; deletions 1 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local splice5 1034706 1034707 . + . intron_id 1 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local intron 1034706 1095635 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 1095634 1095635 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 1095636 1095744 . + . utg265_pilon exonerate:protein2genome:local exon 1095636 1095744 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1031388 1095744 4711 + . alignment_id 0 ; Query GL50803_115066-t26_1-p1 ; Align 1031388 1 474 ; Align 1031871 159 1332 ; Align 1033206 603 1383 ; Align 1034590 1064 96 ; Align 1034686 1097 18 ; Align 1095637 1104 108 utg64_pilon exonerate:protein2genome:local gene 150848 479431 1772 + . gene_id 0 ; sequence GL50803_115085-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 150848 151343 . + . utg64_pilon exonerate:protein2genome:local exon 150848 151343 . + . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local splice5 151344 151345 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 151344 154046 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 154045 154046 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 154047 154578 . + . utg64_pilon exonerate:protein2genome:local exon 154047 154578 . + . insertions 3 ; deletions 6 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local splice5 154579 154580 . + . intron_id 2 ; splice_site "TC" utg64_pilon exonerate:protein2genome:local intron 154579 280668 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 280667 280668 . + . intron_id 1 ; splice_site "TG" utg64_pilon exonerate:protein2genome:local cds 280669 281343 . + . utg64_pilon exonerate:protein2genome:local exon 280669 281343 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local splice5 281344 281345 . + . intron_id 3 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 281344 479184 . + . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 479183 479184 . + . intron_id 2 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 479185 479431 . + . utg64_pilon exonerate:protein2genome:local exon 479185 479431 . + . insertions 3 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 150848 479431 1772 + . alignment_id 0 ; Query GL50803_115085-t26_1-p1 ; Align 150848 6 42 ; Align 150890 21 267 ; Align 151157 111 186 ; Align 154049 174 114 ; Align 154163 213 42 ; Align 154206 227 12 ; Align 154218 233 162 ; Align 154380 290 192 ; Align 154575 354 3 ; Align 280671 356 366 ; Align 281039 478 303 ; Align 479186 580 3 ; Align 479192 581 96 ; Align 479288 615 144 utg308_pilon exonerate:protein2genome:local gene 197085 200858 5310 - . gene_id 0 ; sequence GL50803_115129-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 197085 200858 . - . utg308_pilon exonerate:protein2genome:local exon 197085 200858 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 197085 200858 5310 - . alignment_id 0 ; Query GL50803_115129-t26_1-p1 ; Align 200859 1 1461 ; Align 199398 489 2313 utg308_pilon exonerate:protein2genome:local gene 218453 225559 8198 + . gene_id 0 ; sequence GL50803_115138-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 218453 225559 . + . utg308_pilon exonerate:protein2genome:local exon 218453 225559 . + . insertions 15 ; deletions 4 utg308_pilon exonerate:protein2genome:local similarity 218453 225559 8198 + . alignment_id 0 ; Query GL50803_115138-t26_1-p1 ; Align 218453 1 2133 ; Align 220589 712 1041 ; Align 221630 1060 78 ; Align 221711 1086 810 ; Align 222524 1356 303 ; Align 222827 1458 528 ; Align 223355 1636 1644 ; Align 225005 2184 555 utg47_pilon exonerate:protein2genome:local gene 1989628 1990704 1188 - . gene_id 0 ; sequence GL50803_115158-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1989628 1990704 . - . utg47_pilon exonerate:protein2genome:local exon 1989628 1990704 . - . insertions 30 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 1989628 1990704 1188 - . alignment_id 0 ; Query GL50803_115158-t26_1-p1 ; Align 1990705 101 57 ; Align 1990645 120 183 ; Align 1990447 181 270 ; Align 1990171 271 294 ; Align 1989877 370 18 ; Align 1989859 379 42 ; Align 1989817 394 72 ; Align 1989739 418 111 utg265_pilon exonerate:protein2genome:local gene 90492 92423 2795 + . gene_id 0 ; sequence GL50803_115159-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 90492 92423 . + . utg265_pilon exonerate:protein2genome:local exon 90492 92423 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 90492 92423 2795 + . alignment_id 0 ; Query GL50803_115159-t26_1-p1 ; Align 90492 1 1932 utg47_pilon exonerate:protein2genome:local gene 1743144 1744385 1626 - . gene_id 0 ; sequence GL50803_115200-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1743144 1744385 . - . utg47_pilon exonerate:protein2genome:local exon 1743144 1744385 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1743144 1744385 1626 - . alignment_id 0 ; Query GL50803_115200-t26_1-p1 ; Align 1744386 1 1242 utg308_pilon exonerate:protein2genome:local gene 573482 837394 1925 + . gene_id 0 ; sequence GL50803_115202-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 573482 573872 . + . utg308_pilon exonerate:protein2genome:local exon 573482 573872 . + . insertions 3 ; deletions 4 utg308_pilon exonerate:protein2genome:local splice5 573873 573874 . + . intron_id 1 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 573873 723695 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 723694 723695 . + . intron_id 0 ; splice_site "AT" utg308_pilon exonerate:protein2genome:local cds 723696 723812 . + . utg308_pilon exonerate:protein2genome:local exon 723696 723812 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 723813 723814 . + . intron_id 2 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 723813 835936 . + . intron_id 2 utg308_pilon exonerate:protein2genome:local splice3 835935 835936 . + . intron_id 1 ; splice_site "CG" utg308_pilon exonerate:protein2genome:local cds 835937 837394 . + . utg308_pilon exonerate:protein2genome:local exon 835937 837394 . + . insertions 6 ; deletions 0 ; frameshifts 4 utg308_pilon exonerate:protein2genome:local similarity 573482 837394 1925 + . alignment_id 0 ; Query GL50803_115202-t26_1-p1 ; Align 573482 138 105 ; Align 573587 175 42 ; Align 573629 191 150 ; Align 573782 241 90 ; Align 723698 272 114 ; Align 835939 311 303 ; Align 836245 412 159 ; Align 836405 465 156 ; Align 836564 517 279 ; Align 836844 610 468 ; Align 837314 766 81 utg265_pilon exonerate:protein2genome:local gene 556791 774964 1708 + . gene_id 0 ; sequence GL50803_11521-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 556791 557058 . + . utg265_pilon exonerate:protein2genome:local exon 556791 557058 . + . insertions 9 ; deletions 3 utg265_pilon exonerate:protein2genome:local splice5 557059 557060 . + . intron_id 1 ; splice_site "GC" utg265_pilon exonerate:protein2genome:local intron 557059 588359 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 588358 588359 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 588360 588561 . + . utg265_pilon exonerate:protein2genome:local exon 588360 588561 . + . insertions 3 ; deletions 5 utg265_pilon exonerate:protein2genome:local splice5 588562 588563 . + . intron_id 2 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 588562 714268 . + . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 714267 714268 . + . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 714269 714676 . + . utg265_pilon exonerate:protein2genome:local exon 714269 714676 . + . insertions 3 ; deletions 2 utg265_pilon exonerate:protein2genome:local splice5 714677 714678 . + . intron_id 3 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 714677 773981 . + . intron_id 3 utg265_pilon exonerate:protein2genome:local splice3 773980 773981 . + . intron_id 2 ; splice_site "AA" utg265_pilon exonerate:protein2genome:local cds 773982 774964 . + . utg265_pilon exonerate:protein2genome:local exon 773982 774964 . + . insertions 9 ; deletions 4 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 556791 774964 1708 + . alignment_id 0 ; Query GL50803_11521-t26_1-p1 ; Align 556791 3 99 ; Align 556899 36 30 ; Align 556929 47 75 ; Align 557004 74 54 ; Align 588362 93 30 ; Align 588392 105 54 ; Align 588446 125 18 ; Align 588464 132 69 ; Align 588536 155 24 ; Align 714270 164 114 ; Align 714387 202 216 ; Align 714603 276 72 ; Align 773983 301 51 ; Align 774034 319 108 ; Align 774142 356 207 ; Align 774350 425 243 ; Align 774596 506 51 ; Align 774650 523 36 ; Align 774689 535 123 ; Align 774812 578 153 utg11_pilon exonerate:protein2genome:local gene 1464962 1465108 112 + . gene_id 0 ; sequence GL50803_115221-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1464962 1465108 . + . utg11_pilon exonerate:protein2genome:local exon 1464962 1465108 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1464962 1465108 112 + . alignment_id 0 ; Query GL50803_115221-t26_1-p1 ; Align 1464962 3 147 utg11_pilon exonerate:protein2genome:local gene 1439818 1439985 170 + . gene_id 0 ; sequence GL50803_115229-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1439818 1439985 . + . utg11_pilon exonerate:protein2genome:local exon 1439818 1439985 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1439818 1439985 170 + . alignment_id 0 ; Query GL50803_115229-t26_1-p1 ; Align 1439818 3 168 utg11_pilon exonerate:protein2genome:local gene 1426160 1427809 1813 + . gene_id 0 ; sequence GL50803_115232-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1426160 1427809 . + . utg11_pilon exonerate:protein2genome:local exon 1426160 1427809 . + . insertions 6 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1426160 1427809 1813 + . alignment_id 0 ; Query GL50803_115232-t26_1-p1 ; Align 1426160 1 1170 ; Align 1427336 391 207 ; Align 1427543 461 159 ; Align 1427702 515 108 utg731_pilon exonerate:protein2genome:local gene 104424 107198 4138 + . gene_id 0 ; sequence GL50803_115239-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 104424 107198 . + . utg731_pilon exonerate:protein2genome:local exon 104424 107198 . + . insertions 3 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 104424 107198 4138 + . alignment_id 0 ; Query GL50803_115239-t26_1-p1 ; Align 104424 1 294 ; Align 104718 101 210 ; Align 104931 171 2268 utg731_pilon exonerate:protein2genome:local gene 124247 127480 4563 + . gene_id 0 ; sequence GL50803_115245-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 124247 127480 . + . utg731_pilon exonerate:protein2genome:local exon 124247 127480 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 124247 127480 4563 + . alignment_id 0 ; Query GL50803_115245-t26_1-p1 ; Align 124247 1 48 ; Align 124295 18 591 ; Align 124886 216 2595 utg11_pilon exonerate:protein2genome:local gene 1627820 1628806 1337 + . gene_id 0 ; sequence GL50803_115337-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1627820 1628806 . + . utg11_pilon exonerate:protein2genome:local exon 1627820 1628806 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1627820 1628806 1337 + . alignment_id 0 ; Query GL50803_115337-t26_1-p1 ; Align 1627820 1 987 utg11_pilon exonerate:protein2genome:local gene 1615444 1616430 1337 - . gene_id 0 ; sequence GL50803_115337-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1615444 1616430 . - . utg11_pilon exonerate:protein2genome:local exon 1615444 1616430 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1615444 1616430 1337 - . alignment_id 0 ; Query GL50803_115337-t26_1-p1 ; Align 1616431 1 987 utg11_pilon exonerate:protein2genome:local gene 1627820 1628806 1337 + . gene_id 0 ; sequence GL50803_115338-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1627820 1628806 . + . utg11_pilon exonerate:protein2genome:local exon 1627820 1628806 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1627820 1628806 1337 + . alignment_id 0 ; Query GL50803_115338-t26_1-p1 ; Align 1627820 1 987 utg11_pilon exonerate:protein2genome:local gene 1615444 1616430 1337 - . gene_id 0 ; sequence GL50803_115338-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1615444 1616430 . - . utg11_pilon exonerate:protein2genome:local exon 1615444 1616430 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1615444 1616430 1337 - . alignment_id 0 ; Query GL50803_115338-t26_1-p1 ; Align 1616431 1 987 utg731_pilon exonerate:protein2genome:local gene 1042981 1044000 1274 - . gene_id 0 ; sequence GL50803_11535-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1042981 1044000 . - . utg731_pilon exonerate:protein2genome:local exon 1042981 1044000 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1042981 1044000 1274 - . alignment_id 0 ; Query GL50803_11535-t26_1-p1 ; Align 1044001 1 501 ; Align 1043497 168 516 utg731_pilon exonerate:protein2genome:local gene 1038501 1039724 1631 + . gene_id 0 ; sequence GL50803_11540-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1038501 1039724 . + . utg731_pilon exonerate:protein2genome:local exon 1038501 1039724 . + . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1038501 1039724 1631 + . alignment_id 0 ; Query GL50803_11540-t26_1-p1 ; Align 1038501 1 549 ; Align 1039053 184 27 ; Align 1039083 193 642 utg47_pilon exonerate:protein2genome:local gene 438595 587972 464 - . gene_id 0 ; sequence GL50803_115444-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 587703 587972 . - . utg47_pilon exonerate:protein2genome:local exon 587703 587972 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 587701 587702 . - . intron_id 1 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 438827 587702 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 438827 438828 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 438595 438826 . - . utg47_pilon exonerate:protein2genome:local exon 438595 438826 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 438595 587972 464 - . alignment_id 0 ; Query GL50803_115444-t26_1-p1 ; Align 587973 1 270 ; Align 438827 91 192 ; Align 438634 155 39 utg47_pilon exonerate:protein2genome:local gene 438595 587972 464 - . gene_id 0 ; sequence GL50803_115445-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 587703 587972 . - . utg47_pilon exonerate:protein2genome:local exon 587703 587972 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 587701 587702 . - . intron_id 1 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 438827 587702 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 438827 438828 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 438595 438826 . - . utg47_pilon exonerate:protein2genome:local exon 438595 438826 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 438595 587972 464 - . alignment_id 0 ; Query GL50803_115445-t26_1-p1 ; Align 587973 1 270 ; Align 438827 91 192 ; Align 438634 155 39 utg64_pilon exonerate:protein2genome:local gene 656001 657413 1912 + . gene_id 0 ; sequence GL50803_115464-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 656001 657413 . + . utg64_pilon exonerate:protein2genome:local exon 656001 657413 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 656001 657413 1912 + . alignment_id 0 ; Query GL50803_115464-t26_1-p1 ; Align 656001 1 1107 ; Align 657108 371 306 utg64_pilon exonerate:protein2genome:local gene 656001 657413 1912 + . gene_id 0 ; sequence GL50803_115465-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 656001 657413 . + . utg64_pilon exonerate:protein2genome:local exon 656001 657413 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 656001 657413 1912 + . alignment_id 0 ; Query GL50803_115465-t26_1-p1 ; Align 656001 1 1107 ; Align 657108 371 306 utg349_pilon exonerate:protein2genome:local gene 786879 787766 936 - . gene_id 0 ; sequence GL50803_115468-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 786879 787766 . - . utg349_pilon exonerate:protein2genome:local exon 786879 787766 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 786879 787766 936 - . alignment_id 0 ; Query GL50803_115468-t26_1-p1 ; Align 787767 2 531 ; Align 787236 181 111 ; Align 787125 219 246 utg349_pilon exonerate:protein2genome:local gene 786879 787766 936 - . gene_id 0 ; sequence GL50803_115469-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 786879 787766 . - . utg349_pilon exonerate:protein2genome:local exon 786879 787766 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 786879 787766 936 - . alignment_id 0 ; Query GL50803_115469-t26_1-p1 ; Align 787767 2 531 ; Align 787236 181 111 ; Align 787125 219 246 utg64_pilon exonerate:protein2genome:local gene 554828 765287 365 + . gene_id 0 ; sequence GL50803_115474-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 554828 554955 . + . utg64_pilon exonerate:protein2genome:local exon 554828 554955 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 554956 554957 . + . intron_id 1 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 554956 638934 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 638933 638934 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 638935 638989 . + . utg64_pilon exonerate:protein2genome:local exon 638935 638989 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 638990 638991 . + . intron_id 2 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local intron 638990 765065 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 765064 765065 . + . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 765066 765287 . + . utg64_pilon exonerate:protein2genome:local exon 765066 765287 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 554828 765287 365 + . alignment_id 0 ; Query GL50803_115474-t26_1-p1 ; Align 554828 7 126 ; Align 638936 50 54 ; Align 765066 68 39 ; Align 765108 81 180 utg64_pilon exonerate:protein2genome:local gene 554828 765287 365 + . gene_id 0 ; sequence GL50803_115475-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 554828 554955 . + . utg64_pilon exonerate:protein2genome:local exon 554828 554955 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 554956 554957 . + . intron_id 1 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 554956 638934 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 638933 638934 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 638935 638989 . + . utg64_pilon exonerate:protein2genome:local exon 638935 638989 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 638990 638991 . + . intron_id 2 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local intron 638990 765065 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 765064 765065 . + . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 765066 765287 . + . utg64_pilon exonerate:protein2genome:local exon 765066 765287 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 554828 765287 365 + . alignment_id 0 ; Query GL50803_115475-t26_1-p1 ; Align 554828 7 126 ; Align 638936 50 54 ; Align 765066 68 39 ; Align 765108 81 180 utg308_pilon exonerate:protein2genome:local gene 334155 336362 3330 - . gene_id 0 ; sequence GL50803_115478-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 334155 336362 . - . utg308_pilon exonerate:protein2genome:local exon 334155 336362 . - . insertions 0 ; deletions 6 ; frameshifts 9 utg308_pilon exonerate:protein2genome:local similarity 334155 336362 3330 - . alignment_id 0 ; Query GL50803_115478-t26_1-p1 ; Align 336363 1 537 ; Align 335825 181 777 ; Align 335046 441 699 ; Align 334345 675 45 ; Align 334298 691 51 ; Align 334247 710 3 ; Align 334242 711 87 utg308_pilon exonerate:protein2genome:local gene 334155 336362 3330 - . gene_id 0 ; sequence GL50803_115479-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 334155 336362 . - . utg308_pilon exonerate:protein2genome:local exon 334155 336362 . - . insertions 0 ; deletions 6 ; frameshifts 9 utg308_pilon exonerate:protein2genome:local similarity 334155 336362 3330 - . alignment_id 0 ; Query GL50803_115479-t26_1-p1 ; Align 336363 1 537 ; Align 335825 181 777 ; Align 335046 441 699 ; Align 334345 675 45 ; Align 334298 691 51 ; Align 334247 710 3 ; Align 334242 711 87 utg731_pilon exonerate:protein2genome:local gene 1034811 1035548 811 - . gene_id 0 ; sequence GL50803_11548-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1034811 1035548 . - . utg731_pilon exonerate:protein2genome:local exon 1034811 1035548 . - . insertions 0 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 1034811 1035548 811 - . alignment_id 0 ; Query GL50803_11548-t26_1-p1 ; Align 1035549 1 438 ; Align 1035111 148 180 ; Align 1034931 211 120 utg64_pilon exonerate:protein2genome:local gene 655451 655726 213 + . gene_id 0 ; sequence GL50803_115500-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 655451 655726 . + . utg64_pilon exonerate:protein2genome:local exon 655451 655726 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 655451 655726 213 + . alignment_id 0 ; Query GL50803_115500-t26_1-p1 ; Align 655451 11 276 utg64_pilon exonerate:protein2genome:local gene 655451 655726 213 + . gene_id 0 ; sequence GL50803_115501-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 655451 655726 . + . utg64_pilon exonerate:protein2genome:local exon 655451 655726 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 655451 655726 213 + . alignment_id 0 ; Query GL50803_115501-t26_1-p1 ; Align 655451 11 276 utg731_pilon exonerate:protein2genome:local gene 1031915 1032850 780 + . gene_id 0 ; sequence GL50803_11551-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1031915 1032850 . + . utg731_pilon exonerate:protein2genome:local exon 1031915 1032850 . + . insertions 0 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 1031915 1032850 780 + . alignment_id 0 ; Query GL50803_11551-t26_1-p1 ; Align 1031915 1 708 ; Align 1032623 238 129 ; Align 1032752 284 99 utg731_pilon exonerate:protein2genome:local gene 1029465 1030283 1383 - . gene_id 0 ; sequence GL50803_11554-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1029465 1030283 . - . utg731_pilon exonerate:protein2genome:local exon 1029465 1030283 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1029465 1030283 1383 - . alignment_id 0 ; Query GL50803_11554-t26_1-p1 ; Align 1030284 1 819 utg731_pilon exonerate:protein2genome:local gene 1019440 1022436 3323 - . gene_id 0 ; sequence GL50803_11556-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1019440 1022436 . - . utg731_pilon exonerate:protein2genome:local exon 1019440 1022436 . - . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1019440 1022436 3323 - . alignment_id 0 ; Query GL50803_11556-t26_1-p1 ; Align 1022437 1 1059 ; Align 1021375 354 942 ; Align 1020427 668 987 utg731_pilon exonerate:protein2genome:local gene 1017618 1019425 2605 + . gene_id 0 ; sequence GL50803_11557-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1017618 1019425 . + . utg731_pilon exonerate:protein2genome:local exon 1017618 1019425 . + . insertions 0 ; deletions 3 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 1017618 1019425 2605 + . alignment_id 0 ; Query GL50803_11557-t26_1-p1 ; Align 1017618 6 351 ; Align 1017970 123 141 ; Align 1018112 170 804 ; Align 1018916 441 510 utg99_pilon exonerate:protein2genome:local gene 542236 544632 2480 - . gene_id 0 ; sequence GL50803_115571-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 542236 544632 . - . utg99_pilon exonerate:protein2genome:local exon 542236 544632 . - . insertions 27 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 542236 544632 2480 - . alignment_id 0 ; Query GL50803_115571-t26_1-p1 ; Align 544633 11 282 ; Align 544348 105 312 ; Align 544027 209 210 ; Align 543811 279 672 ; Align 543139 504 123 ; Align 543007 545 771 utg99_pilon exonerate:protein2genome:local gene 493509 497567 4312 + . gene_id 0 ; sequence GL50803_115572-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 493509 497567 . + . utg99_pilon exonerate:protein2genome:local exon 493509 497567 . + . insertions 36 ; deletions 10 utg99_pilon exonerate:protein2genome:local similarity 493509 497567 4312 + . alignment_id 0 ; Query GL50803_115572-t26_1-p1 ; Align 493509 1176 51 ; Align 493560 1196 84 ; Align 493644 1225 312 ; Align 493956 1330 309 ; Align 494274 1433 225 ; Align 494499 1509 672 ; Align 495171 1734 288 ; Align 495462 1830 210 ; Align 495672 1902 96 ; Align 495777 1934 210 ; Align 495993 2004 672 ; Align 496665 2229 123 ; Align 496797 2270 771 utg731_pilon exonerate:protein2genome:local gene 1015089 1016486 1336 + . gene_id 0 ; sequence GL50803_11560-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1015089 1016486 . + . utg731_pilon exonerate:protein2genome:local exon 1015089 1016486 . + . insertions 3 ; deletions 6 utg731_pilon exonerate:protein2genome:local similarity 1015089 1016486 1336 + . alignment_id 0 ; Query GL50803_11560-t26_1-p1 ; Align 1015089 163 90 ; Align 1015179 194 471 ; Align 1015650 352 141 ; Align 1015791 400 111 ; Align 1015905 437 441 ; Align 1016346 585 27 ; Align 1016373 595 48 ; Align 1016421 612 66 utg731_pilon exonerate:protein2genome:local gene 1011835 1013469 2273 - . gene_id 0 ; sequence GL50803_11563-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1011835 1013469 . - . utg731_pilon exonerate:protein2genome:local exon 1011835 1013469 . - . insertions 0 ; deletions 6 utg731_pilon exonerate:protein2genome:local similarity 1011835 1013469 2273 - . alignment_id 0 ; Query GL50803_11563-t26_1-p1 ; Align 1013470 1 1206 ; Align 1012264 404 15 ; Align 1012249 413 39 ; Align 1012210 427 375 utg731_pilon exonerate:protein2genome:local gene 1011050 1011568 509 - . gene_id 0 ; sequence GL50803_11566-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1011050 1011568 . - . utg731_pilon exonerate:protein2genome:local exon 1011050 1011568 . - . insertions 0 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 1011050 1011568 509 - . alignment_id 0 ; Query GL50803_11566-t26_1-p1 ; Align 1011569 1 396 ; Align 1011173 134 39 ; Align 1011134 151 84 utg64_pilon exonerate:protein2genome:local gene 655475 656155 1040 - . gene_id 0 ; sequence GL50803_115694-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 655475 656155 . - . utg64_pilon exonerate:protein2genome:local exon 655475 656155 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 655475 656155 1040 - . alignment_id 0 ; Query GL50803_115694-t26_1-p1 ; Align 656156 1 681 utg64_pilon exonerate:protein2genome:local gene 655475 656155 1040 - . gene_id 0 ; sequence GL50803_115695-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 655475 656155 . - . utg64_pilon exonerate:protein2genome:local exon 655475 656155 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 655475 656155 1040 - . alignment_id 0 ; Query GL50803_115695-t26_1-p1 ; Align 656156 1 681 utg47_pilon exonerate:protein2genome:local gene 1382189 1382296 175 + . gene_id 0 ; sequence GL50803_115704-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1382189 1382296 . + . utg47_pilon exonerate:protein2genome:local exon 1382189 1382296 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1382189 1382296 175 + . alignment_id 0 ; Query GL50803_115704-t26_1-p1 ; Align 1382189 46 108 utg47_pilon exonerate:protein2genome:local gene 1371258 1371365 175 - . gene_id 0 ; sequence GL50803_115704-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1371258 1371365 . - . utg47_pilon exonerate:protein2genome:local exon 1371258 1371365 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1371258 1371365 175 - . alignment_id 0 ; Query GL50803_115704-t26_1-p1 ; Align 1371366 46 108 utg47_pilon exonerate:protein2genome:local gene 1382189 1382296 175 + . gene_id 0 ; sequence GL50803_115705-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1382189 1382296 . + . utg47_pilon exonerate:protein2genome:local exon 1382189 1382296 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1382189 1382296 175 + . alignment_id 0 ; Query GL50803_115705-t26_1-p1 ; Align 1382189 46 108 utg47_pilon exonerate:protein2genome:local gene 1371258 1371365 175 - . gene_id 0 ; sequence GL50803_115705-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1371258 1371365 . - . utg47_pilon exonerate:protein2genome:local exon 1371258 1371365 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1371258 1371365 175 - . alignment_id 0 ; Query GL50803_115705-t26_1-p1 ; Align 1371366 46 108 utg64_pilon exonerate:protein2genome:local gene 88939 351502 205 + . gene_id 0 ; sequence GL50803_115722-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 88939 89022 . + . utg64_pilon exonerate:protein2genome:local exon 88939 89022 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 89023 89024 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 89023 214930 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 214929 214930 . + . intron_id 0 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local cds 214931 214979 . + . utg64_pilon exonerate:protein2genome:local exon 214931 214979 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 214980 214981 . + . intron_id 2 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local intron 214980 351389 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 351388 351389 . + . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 351390 351502 . + . utg64_pilon exonerate:protein2genome:local exon 351390 351502 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 88939 351502 205 + . alignment_id 0 ; Query GL50803_115722-t26_1-p1 ; Align 88939 25 66 ; Align 89008 47 15 ; Align 214931 52 48 ; Align 351392 69 111 utg64_pilon exonerate:protein2genome:local gene 88939 351502 205 + . gene_id 0 ; sequence GL50803_115723-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 88939 89022 . + . utg64_pilon exonerate:protein2genome:local exon 88939 89022 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 89023 89024 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 89023 214930 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 214929 214930 . + . intron_id 0 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local cds 214931 214979 . + . utg64_pilon exonerate:protein2genome:local exon 214931 214979 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 214980 214981 . + . intron_id 2 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local intron 214980 351389 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 351388 351389 . + . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 351390 351502 . + . utg64_pilon exonerate:protein2genome:local exon 351390 351502 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 88939 351502 205 + . alignment_id 0 ; Query GL50803_115723-t26_1-p1 ; Align 88939 25 66 ; Align 89008 47 15 ; Align 214931 52 48 ; Align 351392 69 111 utg349_pilon exonerate:protein2genome:local gene 1236532 1435690 1842 + . gene_id 0 ; sequence GL50803_115742-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1236532 1238125 . + . utg349_pilon exonerate:protein2genome:local exon 1236532 1238125 . + . insertions 15 ; deletions 11 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local splice5 1238126 1238127 . + . intron_id 1 ; splice_site "CG" utg349_pilon exonerate:protein2genome:local intron 1238126 1435581 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1435580 1435581 . + . intron_id 0 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 1435582 1435690 . + . utg349_pilon exonerate:protein2genome:local exon 1435582 1435690 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1236532 1435690 1842 + . alignment_id 0 ; Query GL50803_115742-t26_1-p1 ; Align 1236532 46 87 ; Align 1236619 76 420 ; Align 1237045 216 159 ; Align 1237206 269 111 ; Align 1237320 306 39 ; Align 1237359 320 54 ; Align 1237413 342 117 ; Align 1237533 381 201 ; Align 1237737 448 216 ; Align 1237953 521 36 ; Align 1237989 537 135 ; Align 1435583 583 108 utg731_pilon exonerate:protein2genome:local gene 57498 57704 196 + . gene_id 0 ; sequence GL50803_115746-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 57498 57704 . + . utg731_pilon exonerate:protein2genome:local exon 57498 57704 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 57498 57704 196 + . alignment_id 0 ; Query GL50803_115746-t26_1-p1 ; Align 57498 1 207 utg731_pilon exonerate:protein2genome:local gene 81713 81919 196 - . gene_id 0 ; sequence GL50803_115746-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 81713 81919 . - . utg731_pilon exonerate:protein2genome:local exon 81713 81919 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 81713 81919 196 - . alignment_id 0 ; Query GL50803_115746-t26_1-p1 ; Align 81920 1 207 utg731_pilon exonerate:protein2genome:local gene 57498 57704 196 + . gene_id 0 ; sequence GL50803_115747-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 57498 57704 . + . utg731_pilon exonerate:protein2genome:local exon 57498 57704 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 57498 57704 196 + . alignment_id 0 ; Query GL50803_115747-t26_1-p1 ; Align 57498 1 207 utg731_pilon exonerate:protein2genome:local gene 81713 81919 196 - . gene_id 0 ; sequence GL50803_115747-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 81713 81919 . - . utg731_pilon exonerate:protein2genome:local exon 81713 81919 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 81713 81919 196 - . alignment_id 0 ; Query GL50803_115747-t26_1-p1 ; Align 81920 1 207 utg11_pilon exonerate:protein2genome:local gene 1618110 1618238 147 + . gene_id 0 ; sequence GL50803_115752-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1618110 1618238 . + . utg11_pilon exonerate:protein2genome:local exon 1618110 1618238 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1618110 1618238 147 + . alignment_id 0 ; Query GL50803_115752-t26_1-p1 ; Align 1618110 1 129 utg11_pilon exonerate:protein2genome:local gene 1626013 1626141 147 - . gene_id 0 ; sequence GL50803_115752-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1626013 1626141 . - . utg11_pilon exonerate:protein2genome:local exon 1626013 1626141 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1626013 1626141 147 - . alignment_id 0 ; Query GL50803_115752-t26_1-p1 ; Align 1626142 1 129 utg11_pilon exonerate:protein2genome:local gene 1618110 1618238 147 + . gene_id 0 ; sequence GL50803_115753-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1618110 1618238 . + . utg11_pilon exonerate:protein2genome:local exon 1618110 1618238 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1618110 1618238 147 + . alignment_id 0 ; Query GL50803_115753-t26_1-p1 ; Align 1618110 1 129 utg11_pilon exonerate:protein2genome:local gene 1626013 1626141 147 - . gene_id 0 ; sequence GL50803_115753-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1626013 1626141 . - . utg11_pilon exonerate:protein2genome:local exon 1626013 1626141 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1626013 1626141 147 - . alignment_id 0 ; Query GL50803_115753-t26_1-p1 ; Align 1626142 1 129 utg18_pilon exonerate:protein2genome:local gene 176486 176644 108 + . gene_id 0 ; sequence GL50803_115754-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 176486 176644 . + . utg18_pilon exonerate:protein2genome:local exon 176486 176644 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 176486 176644 108 + . alignment_id 0 ; Query GL50803_115754-t26_1-p1 ; Align 176486 2 159 utg18_pilon exonerate:protein2genome:local gene 182824 182982 108 - . gene_id 0 ; sequence GL50803_115754-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 182824 182982 . - . utg18_pilon exonerate:protein2genome:local exon 182824 182982 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 182824 182982 108 - . alignment_id 0 ; Query GL50803_115754-t26_1-p1 ; Align 182983 2 159 utg18_pilon exonerate:protein2genome:local gene 176486 176644 108 + . gene_id 0 ; sequence GL50803_115755-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 176486 176644 . + . utg18_pilon exonerate:protein2genome:local exon 176486 176644 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 176486 176644 108 + . alignment_id 0 ; Query GL50803_115755-t26_1-p1 ; Align 176486 2 159 utg18_pilon exonerate:protein2genome:local gene 182824 182982 108 - . gene_id 0 ; sequence GL50803_115755-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 182824 182982 . - . utg18_pilon exonerate:protein2genome:local exon 182824 182982 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 182824 182982 108 - . alignment_id 0 ; Query GL50803_115755-t26_1-p1 ; Align 182983 2 159 utg212_pilon exonerate:protein2genome:local gene 464705 464980 132 - . gene_id 0 ; sequence GL50803_115768-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 464705 464980 . - . utg212_pilon exonerate:protein2genome:local exon 464705 464980 . - . insertions 0 ; deletions 0 ; frameshifts 3 utg212_pilon exonerate:protein2genome:local similarity 464705 464980 132 - . alignment_id 0 ; Query GL50803_115768-t26_1-p1 ; Align 464981 1 69 ; Align 464911 24 24 ; Align 464886 32 78 ; Align 464807 58 102 utg212_pilon exonerate:protein2genome:local gene 464705 464980 132 - . gene_id 0 ; sequence GL50803_115769-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 464705 464980 . - . utg212_pilon exonerate:protein2genome:local exon 464705 464980 . - . insertions 0 ; deletions 0 ; frameshifts 3 utg212_pilon exonerate:protein2genome:local similarity 464705 464980 132 - . alignment_id 0 ; Query GL50803_115769-t26_1-p1 ; Align 464981 1 69 ; Align 464911 24 24 ; Align 464886 32 78 ; Align 464807 58 102 utg265_pilon exonerate:protein2genome:local gene 870677 871510 547 + . gene_id 0 ; sequence GL50803_115770-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 870677 871510 . + . utg265_pilon exonerate:protein2genome:local exon 870677 871510 . + . insertions 9 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 870677 871510 547 + . alignment_id 0 ; Query GL50803_115770-t26_1-p1 ; Align 870677 1 438 ; Align 871124 147 387 utg18_pilon exonerate:protein2genome:local gene 92425 92568 180 + . gene_id 0 ; sequence GL50803_115776-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 92425 92568 . + . utg18_pilon exonerate:protein2genome:local exon 92425 92568 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 92425 92568 180 + . alignment_id 0 ; Query GL50803_115776-t26_1-p1 ; Align 92425 1 144 utg18_pilon exonerate:protein2genome:local gene 84877 85020 180 - . gene_id 0 ; sequence GL50803_115776-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 84877 85020 . - . utg18_pilon exonerate:protein2genome:local exon 84877 85020 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 84877 85020 180 - . alignment_id 0 ; Query GL50803_115776-t26_1-p1 ; Align 85021 1 144 utg18_pilon exonerate:protein2genome:local gene 92425 92568 180 + . gene_id 0 ; sequence GL50803_115777-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 92425 92568 . + . utg18_pilon exonerate:protein2genome:local exon 92425 92568 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 92425 92568 180 + . alignment_id 0 ; Query GL50803_115777-t26_1-p1 ; Align 92425 1 144 utg18_pilon exonerate:protein2genome:local gene 84877 85020 180 - . gene_id 0 ; sequence GL50803_115777-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 84877 85020 . - . utg18_pilon exonerate:protein2genome:local exon 84877 85020 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 84877 85020 180 - . alignment_id 0 ; Query GL50803_115777-t26_1-p1 ; Align 85021 1 144 utg731_pilon exonerate:protein2genome:local gene 81356 82093 950 + . gene_id 0 ; sequence GL50803_115786-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 81356 82093 . + . utg731_pilon exonerate:protein2genome:local exon 81356 82093 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 81356 82093 950 + . alignment_id 0 ; Query GL50803_115786-t26_1-p1 ; Align 81356 1 738 utg731_pilon exonerate:protein2genome:local gene 81356 82093 950 + . gene_id 0 ; sequence GL50803_115787-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 81356 82093 . + . utg731_pilon exonerate:protein2genome:local exon 81356 82093 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 81356 82093 950 + . alignment_id 0 ; Query GL50803_115787-t26_1-p1 ; Align 81356 1 738 utg47_pilon exonerate:protein2genome:local gene 826142 869279 681 + . gene_id 0 ; sequence GL50803_115796-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 826142 826564 . + . utg47_pilon exonerate:protein2genome:local exon 826142 826564 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 826565 826566 . + . intron_id 1 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 826565 869138 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 869137 869138 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 869139 869279 . + . utg47_pilon exonerate:protein2genome:local exon 869139 869279 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 826142 869279 681 + . alignment_id 0 ; Query GL50803_115796-t26_1-p1 ; Align 826142 1 423 ; Align 869139 142 141 utg349_pilon exonerate:protein2genome:local gene 1240058 1435690 2041 + . gene_id 0 ; sequence GL50803_115797-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1240058 1240421 . + . utg349_pilon exonerate:protein2genome:local exon 1240058 1240421 . + . insertions 9 ; deletions 2 utg349_pilon exonerate:protein2genome:local splice5 1240422 1240423 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1240422 1240893 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1240892 1240893 . + . intron_id 0 ; splice_site "TG" utg349_pilon exonerate:protein2genome:local cds 1240894 1241584 . + . utg349_pilon exonerate:protein2genome:local exon 1240894 1241584 . + . insertions 3 ; deletions 2 utg349_pilon exonerate:protein2genome:local splice5 1241585 1241586 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1241585 1376939 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1376938 1376939 . + . intron_id 1 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1376940 1377802 . + . utg349_pilon exonerate:protein2genome:local exon 1376940 1377802 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1377803 1377804 . + . intron_id 3 ; splice_site "CT" utg349_pilon exonerate:protein2genome:local intron 1377803 1435565 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 1435564 1435565 . + . intron_id 2 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 1435566 1435690 . + . utg349_pilon exonerate:protein2genome:local exon 1435566 1435690 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1240058 1435690 2041 + . alignment_id 0 ; Query GL50803_115797-t26_1-p1 ; Align 1240058 1 162 ; Align 1240223 55 42 ; Align 1240271 69 39 ; Align 1240310 83 69 ; Align 1240379 107 42 ; Align 1240896 122 123 ; Align 1241022 163 135 ; Align 1241157 209 195 ; Align 1241352 275 231 ; Align 1376941 353 852 ; Align 1377793 638 9 ; Align 1435568 642 123 utg349_pilon exonerate:protein2genome:local gene 1102857 1450175 1540 + . gene_id 0 ; sequence GL50803_115830-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1102857 1103496 . + . utg349_pilon exonerate:protein2genome:local exon 1102857 1103496 . + . insertions 15 ; deletions 5 utg349_pilon exonerate:protein2genome:local splice5 1103497 1103498 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1103497 1245226 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1245225 1245226 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1245227 1245473 . + . utg349_pilon exonerate:protein2genome:local exon 1245227 1245473 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1245474 1245475 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1245474 1434714 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1434713 1434714 . + . intron_id 1 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 1434715 1435595 . + . utg349_pilon exonerate:protein2genome:local exon 1434715 1435595 . + . insertions 15 ; deletions 8 utg349_pilon exonerate:protein2genome:local splice5 1435596 1435597 . + . intron_id 3 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 1435596 1450062 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 1450061 1450062 . + . intron_id 2 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 1450063 1450175 . + . utg349_pilon exonerate:protein2genome:local exon 1450063 1450175 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1102857 1450175 1540 + . alignment_id 0 ; Query GL50803_115830-t26_1-p1 ; Align 1102857 3 174 ; Align 1103040 61 144 ; Align 1103184 111 48 ; Align 1103232 129 117 ; Align 1103352 168 57 ; Align 1103412 187 69 ; Align 1103481 211 15 ; Align 1245229 217 18 ; Align 1245247 224 225 ; Align 1434716 300 87 ; Align 1434803 330 114 ; Align 1434917 370 243 ; Align 1435160 453 105 ; Align 1435265 489 27 ; Align 1435295 498 75 ; Align 1435379 523 33 ; Align 1435412 535 99 ; Align 1435511 569 42 ; Align 1435556 583 39 ; Align 1450065 597 111 utg349_pilon exonerate:protein2genome:local gene 1102857 1450175 1540 + . gene_id 0 ; sequence GL50803_115831-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1102857 1103496 . + . utg349_pilon exonerate:protein2genome:local exon 1102857 1103496 . + . insertions 15 ; deletions 5 utg349_pilon exonerate:protein2genome:local splice5 1103497 1103498 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1103497 1245226 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1245225 1245226 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1245227 1245473 . + . utg349_pilon exonerate:protein2genome:local exon 1245227 1245473 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1245474 1245475 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1245474 1434714 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1434713 1434714 . + . intron_id 1 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 1434715 1435595 . + . utg349_pilon exonerate:protein2genome:local exon 1434715 1435595 . + . insertions 15 ; deletions 8 utg349_pilon exonerate:protein2genome:local splice5 1435596 1435597 . + . intron_id 3 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 1435596 1450062 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 1450061 1450062 . + . intron_id 2 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 1450063 1450175 . + . utg349_pilon exonerate:protein2genome:local exon 1450063 1450175 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1102857 1450175 1540 + . alignment_id 0 ; Query GL50803_115831-t26_1-p1 ; Align 1102857 3 174 ; Align 1103040 61 144 ; Align 1103184 111 48 ; Align 1103232 129 117 ; Align 1103352 168 57 ; Align 1103412 187 69 ; Align 1103481 211 15 ; Align 1245229 217 18 ; Align 1245247 224 225 ; Align 1434716 300 87 ; Align 1434803 330 114 ; Align 1434917 370 243 ; Align 1435160 453 105 ; Align 1435265 489 27 ; Align 1435295 498 75 ; Align 1435379 523 33 ; Align 1435412 535 99 ; Align 1435511 569 42 ; Align 1435556 583 39 ; Align 1450065 597 111 utg1966_pilon exonerate:protein2genome:local gene 52598 52867 102 - . gene_id 0 ; sequence GL50803_115874-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 52598 52867 . - . utg1966_pilon exonerate:protein2genome:local exon 52598 52867 . - . insertions 0 ; deletions 3 ; frameshifts 3 utg1966_pilon exonerate:protein2genome:local similarity 52598 52867 102 - . alignment_id 0 ; Query GL50803_115874-t26_1-p1 ; Align 52868 5 39 ; Align 52828 18 75 ; Align 52753 44 12 ; Align 52739 48 105 ; Align 52634 85 36 utg1966_pilon exonerate:protein2genome:local gene 52598 52867 102 - . gene_id 0 ; sequence GL50803_115875-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 52598 52867 . - . utg1966_pilon exonerate:protein2genome:local exon 52598 52867 . - . insertions 0 ; deletions 3 ; frameshifts 3 utg1966_pilon exonerate:protein2genome:local similarity 52598 52867 102 - . alignment_id 0 ; Query GL50803_115875-t26_1-p1 ; Align 52868 5 39 ; Align 52828 18 75 ; Align 52753 44 12 ; Align 52739 48 105 ; Align 52634 85 36 utg308_pilon exonerate:protein2genome:local gene 289146 290534 2153 - . gene_id 0 ; sequence GL50803_11595-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 289146 290534 . - . utg308_pilon exonerate:protein2genome:local exon 289146 290534 . - . insertions 12 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 289146 290534 2153 - . alignment_id 0 ; Query GL50803_11595-t26_1-p1 ; Align 290535 1 1302 ; Align 289221 435 75 utg11_pilon exonerate:protein2genome:local gene 1815064 1815240 237 - . gene_id 0 ; sequence GL50803_115973-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1815064 1815240 . - . utg11_pilon exonerate:protein2genome:local exon 1815064 1815240 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1815064 1815240 237 - . alignment_id 0 ; Query GL50803_115973-t26_1-p1 ; Align 1815241 26 177 utg11_pilon exonerate:protein2genome:local gene 1815064 1815240 237 - . gene_id 0 ; sequence GL50803_115974-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1815064 1815240 . - . utg11_pilon exonerate:protein2genome:local exon 1815064 1815240 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1815064 1815240 237 - . alignment_id 0 ; Query GL50803_115974-t26_1-p1 ; Align 1815241 26 177 utg308_pilon exonerate:protein2genome:local gene 285142 286326 1801 + . gene_id 0 ; sequence GL50803_11599-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 285142 286326 . + . utg308_pilon exonerate:protein2genome:local exon 285142 286326 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 285142 286326 1801 + . alignment_id 0 ; Query GL50803_11599-t26_1-p1 ; Align 285142 1 1185 utg308_pilon exonerate:protein2genome:local gene 278630 279550 1353 - . gene_id 0 ; sequence GL50803_11604-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 278630 279550 . - . utg308_pilon exonerate:protein2genome:local exon 278630 279550 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 278630 279550 1353 - . alignment_id 0 ; Query GL50803_11604-t26_1-p1 ; Align 279551 1 690 ; Align 278861 232 231 utg308_pilon exonerate:protein2genome:local gene 278100 278192 120 - . gene_id 0 ; sequence GL50803_11605-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 278100 278192 . - . utg308_pilon exonerate:protein2genome:local exon 278100 278192 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 278100 278192 120 - . alignment_id 0 ; Query GL50803_11605-t26_1-p1 ; Align 278193 27 93 utg731_pilon exonerate:protein2genome:local gene 578216 578413 190 + . gene_id 0 ; sequence GL50803_116089-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 578216 578413 . + . utg731_pilon exonerate:protein2genome:local exon 578216 578413 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 578216 578413 190 + . alignment_id 0 ; Query GL50803_116089-t26_1-p1 ; Align 578216 1 198 utg731_pilon exonerate:protein2genome:local gene 570114 570311 190 - . gene_id 0 ; sequence GL50803_116089-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 570114 570311 . - . utg731_pilon exonerate:protein2genome:local exon 570114 570311 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 570114 570311 190 - . alignment_id 0 ; Query GL50803_116089-t26_1-p1 ; Align 570312 1 198 utg308_pilon exonerate:protein2genome:local gene 275609 275698 124 + . gene_id 0 ; sequence GL50803_11609-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 275609 275698 . + . utg308_pilon exonerate:protein2genome:local exon 275609 275698 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 275609 275698 124 + . alignment_id 0 ; Query GL50803_11609-t26_1-p1 ; Align 275609 20 90 utg731_pilon exonerate:protein2genome:local gene 578216 578413 190 + . gene_id 0 ; sequence GL50803_116090-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 578216 578413 . + . utg731_pilon exonerate:protein2genome:local exon 578216 578413 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 578216 578413 190 + . alignment_id 0 ; Query GL50803_116090-t26_1-p1 ; Align 578216 1 198 utg731_pilon exonerate:protein2genome:local gene 570114 570311 190 - . gene_id 0 ; sequence GL50803_116090-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 570114 570311 . - . utg731_pilon exonerate:protein2genome:local exon 570114 570311 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 570114 570311 190 - . alignment_id 0 ; Query GL50803_116090-t26_1-p1 ; Align 570312 1 198 utg308_pilon exonerate:protein2genome:local gene 269355 269888 834 + . gene_id 0 ; sequence GL50803_11613-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 269355 269888 . + . utg308_pilon exonerate:protein2genome:local exon 269355 269888 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 269355 269888 834 + . alignment_id 0 ; Query GL50803_11613-t26_1-p1 ; Align 269355 1 534 utg8808_pilon exonerate:protein2genome:local gene 36718 36831 199 - . gene_id 0 ; sequence GL50803_116201-t26_1-p1 ; gene_orientation . utg8808_pilon exonerate:protein2genome:local cds 36718 36831 . - . utg8808_pilon exonerate:protein2genome:local exon 36718 36831 . - . insertions 0 ; deletions 0 utg8808_pilon exonerate:protein2genome:local similarity 36718 36831 199 - . alignment_id 0 ; Query GL50803_116201-t26_1-p1 ; Align 36832 2 114 utg308_pilon exonerate:protein2genome:local gene 252106 253557 1663 + . gene_id 0 ; sequence GL50803_11621-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 252106 253557 . + . utg308_pilon exonerate:protein2genome:local exon 252106 253557 . + . insertions 0 ; deletions 10 utg308_pilon exonerate:protein2genome:local similarity 252106 253557 1663 + . alignment_id 0 ; Query GL50803_11621-t26_1-p1 ; Align 252106 1 348 ; Align 252454 118 105 ; Align 252559 156 279 ; Align 252838 250 153 ; Align 252991 304 27 ; Align 253018 315 540 utg308_pilon exonerate:protein2genome:local gene 249482 250489 1052 - . gene_id 0 ; sequence GL50803_11624-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 249482 250489 . - . utg308_pilon exonerate:protein2genome:local exon 249482 250489 . - . insertions 12 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 249482 250489 1052 - . alignment_id 0 ; Query GL50803_11624-t26_1-p1 ; Align 250490 7 441 ; Align 250046 154 12 ; Align 250025 158 543 utg212_pilon exonerate:protein2genome:local gene 59177 59395 230 - . gene_id 0 ; sequence GL50803_116271-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 59177 59395 . - . utg212_pilon exonerate:protein2genome:local exon 59177 59395 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 59177 59395 230 - . alignment_id 0 ; Query GL50803_116271-t26_1-p1 ; Align 59396 70 219 utg18_pilon exonerate:protein2genome:local gene 405249 405497 370 - . gene_id 0 ; sequence GL50803_11632-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 405249 405497 . - . utg18_pilon exonerate:protein2genome:local exon 405249 405497 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 405249 405497 370 - . alignment_id 0 ; Query GL50803_11632-t26_1-p1 ; Align 405498 1 249 utg18_pilon exonerate:protein2genome:local gene 414561 416093 2127 - . gene_id 0 ; sequence GL50803_11638-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 414561 416093 . - . utg18_pilon exonerate:protein2genome:local exon 414561 416093 . - . insertions 0 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 414561 416093 2127 - . alignment_id 0 ; Query GL50803_11638-t26_1-p1 ; Align 416094 1 978 ; Align 415116 328 555 utg18_pilon exonerate:protein2genome:local gene 416241 418943 3332 + . gene_id 0 ; sequence GL50803_11640-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 416241 418943 . + . utg18_pilon exonerate:protein2genome:local exon 416241 418943 . + . insertions 3 ; deletions 7 utg18_pilon exonerate:protein2genome:local similarity 416241 418943 3332 + . alignment_id 0 ; Query GL50803_11640-t26_1-p1 ; Align 416241 1 1443 ; Align 417684 485 27 ; Align 417714 494 165 ; Align 417879 551 912 ; Align 418791 856 81 ; Align 418872 884 72 utg18_pilon exonerate:protein2genome:local gene 419076 420686 2212 + . gene_id 0 ; sequence GL50803_11642-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 419076 420686 . + . utg18_pilon exonerate:protein2genome:local exon 419076 420686 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 419076 420686 2212 + . alignment_id 0 ; Query GL50803_11642-t26_1-p1 ; Align 419076 1 1611 utg18_pilon exonerate:protein2genome:local gene 420883 420990 135 - . gene_id 0 ; sequence GL50803_11643-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 420883 420990 . - . utg18_pilon exonerate:protein2genome:local exon 420883 420990 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 420883 420990 135 - . alignment_id 0 ; Query GL50803_11643-t26_1-p1 ; Align 420991 1 108 utg18_pilon exonerate:protein2genome:local gene 422915 423865 1515 + . gene_id 0 ; sequence GL50803_11647-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 422915 423865 . + . utg18_pilon exonerate:protein2genome:local exon 422915 423865 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 422915 423865 1515 + . alignment_id 0 ; Query GL50803_11647-t26_1-p1 ; Align 422915 1 951 utg349_pilon exonerate:protein2genome:local gene 7302 167309 1962 - . gene_id 0 ; sequence GL50803_116477-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 166420 167309 . - . utg349_pilon exonerate:protein2genome:local exon 166420 167309 . - . insertions 6 ; deletions 5 utg349_pilon exonerate:protein2genome:local splice5 166418 166419 . - . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 89783 166419 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 89783 89784 . - . intron_id 0 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 88935 89782 . - . utg349_pilon exonerate:protein2genome:local exon 88935 89782 . - . insertions 12 ; deletions 3 utg349_pilon exonerate:protein2genome:local splice5 88933 88934 . - . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 81082 88934 . - . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 81082 81083 . - . intron_id 1 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 80969 81081 . - . utg349_pilon exonerate:protein2genome:local exon 80969 81081 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 80967 80968 . - . intron_id 3 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 7542 80968 . - . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 7542 7543 . - . intron_id 2 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 7302 7541 . - . utg349_pilon exonerate:protein2genome:local exon 7302 7541 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 7302 167309 1962 - . alignment_id 0 ; Query GL50803_116477-t26_1-p1 ; Align 167310 47 228 ; Align 167079 123 120 ; Align 166959 164 108 ; Align 166848 200 249 ; Align 166599 285 81 ; Align 166518 313 15 ; Align 166503 319 81 ; Align 89782 347 120 ; Align 89659 387 108 ; Align 89551 426 168 ; Align 89374 482 438 ; Align 81080 629 111 ; Align 7542 666 138 ; Align 7404 715 102 utg18_pilon exonerate:protein2genome:local gene 423892 424386 595 + . gene_id 0 ; sequence GL50803_11648-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 423892 424386 . + . utg18_pilon exonerate:protein2genome:local exon 423892 424386 . + . insertions 0 ; deletions 3 utg18_pilon exonerate:protein2genome:local similarity 423892 424386 595 + . alignment_id 0 ; Query GL50803_11648-t26_1-p1 ; Align 423892 1 213 ; Align 424105 75 282 utg1966_pilon exonerate:protein2genome:local gene 189827 191334 474 + . gene_id 0 ; sequence GL50803_116482-t26_1-p1 ; gene_orientation + utg1966_pilon exonerate:protein2genome:local cds 189827 190151 . + . utg1966_pilon exonerate:protein2genome:local exon 189827 190151 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg1966_pilon exonerate:protein2genome:local splice5 190152 190153 . + . intron_id 1 ; splice_site "AA" utg1966_pilon exonerate:protein2genome:local intron 190152 190987 . + . intron_id 1 utg1966_pilon exonerate:protein2genome:local splice3 190986 190987 . + . intron_id 0 ; splice_site "AG" utg1966_pilon exonerate:protein2genome:local cds 190988 191334 . + . utg1966_pilon exonerate:protein2genome:local exon 190988 191334 . + . insertions 3 ; deletions 5 ; frameshifts 5 utg1966_pilon exonerate:protein2genome:local similarity 189827 191334 474 + . alignment_id 0 ; Query GL50803_116482-t26_1-p1 ; Align 189827 1 69 ; Align 189897 24 255 ; Align 190988 109 48 ; Align 191039 125 51 ; Align 191095 142 81 ; Align 191176 174 159 utg1966_pilon exonerate:protein2genome:local gene 189827 191334 474 + . gene_id 0 ; sequence GL50803_116483-t26_1-p1 ; gene_orientation + utg1966_pilon exonerate:protein2genome:local cds 189827 190151 . + . utg1966_pilon exonerate:protein2genome:local exon 189827 190151 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg1966_pilon exonerate:protein2genome:local splice5 190152 190153 . + . intron_id 1 ; splice_site "AA" utg1966_pilon exonerate:protein2genome:local intron 190152 190987 . + . intron_id 1 utg1966_pilon exonerate:protein2genome:local splice3 190986 190987 . + . intron_id 0 ; splice_site "AG" utg1966_pilon exonerate:protein2genome:local cds 190988 191334 . + . utg1966_pilon exonerate:protein2genome:local exon 190988 191334 . + . insertions 3 ; deletions 5 ; frameshifts 5 utg1966_pilon exonerate:protein2genome:local similarity 189827 191334 474 + . alignment_id 0 ; Query GL50803_116483-t26_1-p1 ; Align 189827 1 69 ; Align 189897 24 255 ; Align 190988 109 48 ; Align 191039 125 51 ; Align 191095 142 81 ; Align 191176 174 159 utg18_pilon exonerate:protein2genome:local gene 424431 425357 1472 - . gene_id 0 ; sequence GL50803_11649-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 424431 425357 . - . utg18_pilon exonerate:protein2genome:local exon 424431 425357 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 424431 425357 1472 - . alignment_id 0 ; Query GL50803_11649-t26_1-p1 ; Align 425358 1 927 utg18_pilon exonerate:protein2genome:local gene 429704 430588 1544 + . gene_id 0 ; sequence GL50803_11654-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 429704 430588 . + . utg18_pilon exonerate:protein2genome:local exon 429704 430588 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 429704 430588 1544 + . alignment_id 0 ; Query GL50803_11654-t26_1-p1 ; Align 429704 1 885 utg47_pilon exonerate:protein2genome:local gene 1555177 1704762 145 + . gene_id 0 ; sequence GL50803_116574-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1555177 1555253 . + . utg47_pilon exonerate:protein2genome:local exon 1555177 1555253 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1555254 1555255 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1555254 1704551 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1704550 1704551 . + . intron_id 0 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local cds 1704552 1704762 . + . utg47_pilon exonerate:protein2genome:local exon 1704552 1704762 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1555177 1704762 145 + . alignment_id 0 ; Query GL50803_116574-t26_1-p1 ; Align 1555177 1 75 ; Align 1704553 27 210 utg47_pilon exonerate:protein2genome:local gene 1555177 1704762 145 + . gene_id 0 ; sequence GL50803_116575-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1555177 1555253 . + . utg47_pilon exonerate:protein2genome:local exon 1555177 1555253 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1555254 1555255 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1555254 1704551 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1704550 1704551 . + . intron_id 0 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local cds 1704552 1704762 . + . utg47_pilon exonerate:protein2genome:local exon 1704552 1704762 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1555177 1704762 145 + . alignment_id 0 ; Query GL50803_116575-t26_1-p1 ; Align 1555177 1 75 ; Align 1704553 27 210 utg308_pilon exonerate:protein2genome:local gene 308093 308329 278 - . gene_id 0 ; sequence GL50803_116708-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 308093 308329 . - . utg308_pilon exonerate:protein2genome:local exon 308093 308329 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 308093 308329 278 - . alignment_id 0 ; Query GL50803_116708-t26_1-p1 ; Align 308330 1 237 utg308_pilon exonerate:protein2genome:local gene 308093 308329 278 - . gene_id 0 ; sequence GL50803_116709-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 308093 308329 . - . utg308_pilon exonerate:protein2genome:local exon 308093 308329 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 308093 308329 278 - . alignment_id 0 ; Query GL50803_116709-t26_1-p1 ; Align 308330 1 237 utg47_pilon exonerate:protein2genome:local gene 388548 388991 485 - . gene_id 0 ; sequence GL50803_116712-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 388548 388991 . - . utg47_pilon exonerate:protein2genome:local exon 388548 388991 . - . insertions 9 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 388548 388991 485 - . alignment_id 0 ; Query GL50803_116712-t26_1-p1 ; Align 388992 1 249 ; Align 388734 84 186 utg47_pilon exonerate:protein2genome:local gene 388548 388991 485 - . gene_id 0 ; sequence GL50803_116713-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 388548 388991 . - . utg47_pilon exonerate:protein2genome:local exon 388548 388991 . - . insertions 9 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 388548 388991 485 - . alignment_id 0 ; Query GL50803_116713-t26_1-p1 ; Align 388992 1 249 ; Align 388734 84 186 utg265_pilon exonerate:protein2genome:local gene 990603 992366 2401 + . gene_id 0 ; sequence GL50803_11676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 990603 992366 . + . utg265_pilon exonerate:protein2genome:local exon 990603 992366 . + . insertions 9 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 990603 992366 2401 + . alignment_id 0 ; Query GL50803_11676-t26_1-p1 ; Align 990603 1 1194 ; Align 991806 399 192 ; Align 991998 464 369 utg265_pilon exonerate:protein2genome:local gene 989874 990545 850 - . gene_id 0 ; sequence GL50803_11677-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 989874 990545 . - . utg265_pilon exonerate:protein2genome:local exon 989874 990545 . - . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 989874 990545 850 - . alignment_id 0 ; Query GL50803_11677-t26_1-p1 ; Align 990546 1 237 ; Align 990309 83 435 utg265_pilon exonerate:protein2genome:local gene 983207 984094 1469 + . gene_id 0 ; sequence GL50803_11683-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 983207 984094 . + . utg265_pilon exonerate:protein2genome:local exon 983207 984094 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 983207 984094 1469 + . alignment_id 0 ; Query GL50803_11683-t26_1-p1 ; Align 983207 1 888 utg265_pilon exonerate:protein2genome:local gene 980588 983023 3437 - . gene_id 0 ; sequence GL50803_11684-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 980588 983023 . - . utg265_pilon exonerate:protein2genome:local exon 980588 983023 . - . insertions 0 ; deletions 6 utg265_pilon exonerate:protein2genome:local similarity 980588 983023 3437 - . alignment_id 0 ; Query GL50803_11684-t26_1-p1 ; Align 983024 1 1503 ; Align 981521 503 714 ; Align 980807 746 219 utg265_pilon exonerate:protein2genome:local gene 975516 976085 880 + . gene_id 0 ; sequence GL50803_11690-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 975516 976085 . + . utg265_pilon exonerate:protein2genome:local exon 975516 976085 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 975516 976085 880 + . alignment_id 0 ; Query GL50803_11690-t26_1-p1 ; Align 975516 1 570 utg265_pilon exonerate:protein2genome:local gene 972218 975412 4321 - . gene_id 0 ; sequence GL50803_11692-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 972218 975412 . - . utg265_pilon exonerate:protein2genome:local exon 972218 975412 . - . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 972218 975412 4321 - . alignment_id 0 ; Query GL50803_11692-t26_1-p1 ; Align 975413 1 2079 ; Align 973334 697 15 ; Align 973319 703 1101 utg265_pilon exonerate:protein2genome:local gene 965992 966501 885 + . gene_id 0 ; sequence GL50803_11696-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 965992 966501 . + . utg265_pilon exonerate:protein2genome:local exon 965992 966501 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 965992 966501 885 + . alignment_id 0 ; Query GL50803_11696-t26_1-p1 ; Align 965992 1 510 utg731_pilon exonerate:protein2genome:local gene 1432871 1433738 1021 - . gene_id 0 ; sequence GL50803_116967-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1432871 1433738 . - . utg731_pilon exonerate:protein2genome:local exon 1432871 1433738 . - . insertions 3 ; deletions 1 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 1432871 1433738 1021 - . alignment_id 0 ; Query GL50803_116967-t26_1-p1 ; Align 1433739 1 147 ; Align 1433591 50 486 ; Align 1433102 212 135 ; Align 1432967 258 96 utg731_pilon exonerate:protein2genome:local gene 1432871 1433738 1021 - . gene_id 0 ; sequence GL50803_116968-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1432871 1433738 . - . utg731_pilon exonerate:protein2genome:local exon 1432871 1433738 . - . insertions 3 ; deletions 1 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 1432871 1433738 1021 - . alignment_id 0 ; Query GL50803_116968-t26_1-p1 ; Align 1433739 1 147 ; Align 1433591 50 486 ; Align 1433102 212 135 ; Align 1432967 258 96 utg265_pilon exonerate:protein2genome:local gene 956247 957938 2335 + . gene_id 0 ; sequence GL50803_11700-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 956247 957938 . + . utg265_pilon exonerate:protein2genome:local exon 956247 957938 . + . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 956247 957938 2335 + . alignment_id 0 ; Query GL50803_11700-t26_1-p1 ; Align 956247 1 1158 ; Align 957405 389 39 ; Align 957444 403 495 utg265_pilon exonerate:protein2genome:local gene 955708 956202 528 - . gene_id 0 ; sequence GL50803_11701-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 955708 956202 . - . utg265_pilon exonerate:protein2genome:local exon 955708 956202 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 955708 956202 528 - . alignment_id 0 ; Query GL50803_11701-t26_1-p1 ; Align 956203 1 495 utg349_pilon exonerate:protein2genome:local gene 903645 907277 4017 - . gene_id 0 ; sequence GL50803_11712-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 903645 907277 . - . utg349_pilon exonerate:protein2genome:local exon 903645 907277 . - . insertions 0 ; deletions 7 utg349_pilon exonerate:protein2genome:local similarity 903645 907277 4017 - . alignment_id 0 ; Query GL50803_11712-t26_1-p1 ; Align 907278 1 429 ; Align 906849 147 1977 ; Align 904872 809 201 ; Align 904671 877 1026 utg349_pilon exonerate:protein2genome:local gene 907689 908012 508 + . gene_id 0 ; sequence GL50803_11713-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 907689 908012 . + . utg349_pilon exonerate:protein2genome:local exon 907689 908012 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 907689 908012 508 + . alignment_id 0 ; Query GL50803_11713-t26_1-p1 ; Align 907689 1 324 utg349_pilon exonerate:protein2genome:local gene 908106 909491 2042 + . gene_id 0 ; sequence GL50803_11714-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 908106 909491 . + . utg349_pilon exonerate:protein2genome:local exon 908106 909491 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 908106 909491 2042 + . alignment_id 0 ; Query GL50803_11714-t26_1-p1 ; Align 908106 1 1134 ; Align 909240 381 252 utg349_pilon exonerate:protein2genome:local gene 909581 910108 605 + . gene_id 0 ; sequence GL50803_11715-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 909581 910108 . + . utg349_pilon exonerate:protein2genome:local exon 909581 910108 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 909581 910108 605 + . alignment_id 0 ; Query GL50803_11715-t26_1-p1 ; Align 909581 1 528 utg349_pilon exonerate:protein2genome:local gene 910890 912707 2404 + . gene_id 0 ; sequence GL50803_11716-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 910890 912707 . + . utg349_pilon exonerate:protein2genome:local exon 910890 912707 . + . insertions 6 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 910890 912707 2404 + . alignment_id 0 ; Query GL50803_11716-t26_1-p1 ; Align 910890 137 756 ; Align 911646 390 393 ; Align 912045 521 663 utg11_pilon exonerate:protein2genome:local gene 1600990 1601145 255 + . gene_id 0 ; sequence GL50803_117163-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1600990 1601145 . + . utg11_pilon exonerate:protein2genome:local exon 1600990 1601145 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1600990 1601145 255 + . alignment_id 0 ; Query GL50803_117163-t26_1-p1 ; Align 1600990 1 156 utg11_pilon exonerate:protein2genome:local gene 1600990 1601145 255 + . gene_id 0 ; sequence GL50803_117164-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1600990 1601145 . + . utg11_pilon exonerate:protein2genome:local exon 1600990 1601145 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1600990 1601145 255 + . alignment_id 0 ; Query GL50803_117164-t26_1-p1 ; Align 1600990 1 156 utg349_pilon exonerate:protein2genome:local gene 348726 349673 1121 - . gene_id 0 ; sequence GL50803_117191-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 348726 349673 . - . utg349_pilon exonerate:protein2genome:local exon 348726 349673 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 348726 349673 1121 - . alignment_id 0 ; Query GL50803_117191-t26_1-p1 ; Align 349674 1 594 ; Align 349080 200 354 utg349_pilon exonerate:protein2genome:local gene 348726 349673 1121 - . gene_id 0 ; sequence GL50803_117192-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 348726 349673 . - . utg349_pilon exonerate:protein2genome:local exon 348726 349673 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 348726 349673 1121 - . alignment_id 0 ; Query GL50803_117192-t26_1-p1 ; Align 349674 1 594 ; Align 349080 200 354 utg349_pilon exonerate:protein2genome:local gene 914053 915387 2043 + . gene_id 0 ; sequence GL50803_11720-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 914053 915387 . + . utg349_pilon exonerate:protein2genome:local exon 914053 915387 . + . insertions 9 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 914053 915387 2043 + . alignment_id 0 ; Query GL50803_11720-t26_1-p1 ; Align 914053 1 1068 ; Align 915130 357 258 utg47_pilon exonerate:protein2genome:local gene 1623262 1915500 545 - . gene_id 0 ; sequence GL50803_117203-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1915303 1915500 . - . utg47_pilon exonerate:protein2genome:local exon 1915303 1915500 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 1915301 1915302 . - . intron_id 1 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 1780504 1915302 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1780504 1780505 . - . intron_id 0 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 1780143 1780503 . - . utg47_pilon exonerate:protein2genome:local exon 1780143 1780503 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1780141 1780142 . - . intron_id 2 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 1623453 1780142 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1623453 1623454 . - . intron_id 1 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 1623262 1623452 . - . utg47_pilon exonerate:protein2genome:local exon 1623262 1623452 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1623262 1915500 545 - . alignment_id 0 ; Query GL50803_117203-t26_1-p1 ; Align 1915501 1 126 ; Align 1915375 44 72 ; Align 1780504 68 66 ; Align 1780438 91 60 ; Align 1780378 112 234 ; Align 1623451 191 189 utg47_pilon exonerate:protein2genome:local gene 1623262 1915500 545 - . gene_id 0 ; sequence GL50803_117204-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1915303 1915500 . - . utg47_pilon exonerate:protein2genome:local exon 1915303 1915500 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 1915301 1915302 . - . intron_id 1 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 1780504 1915302 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1780504 1780505 . - . intron_id 0 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 1780143 1780503 . - . utg47_pilon exonerate:protein2genome:local exon 1780143 1780503 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1780141 1780142 . - . intron_id 2 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 1623453 1780142 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1623453 1623454 . - . intron_id 1 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 1623262 1623452 . - . utg47_pilon exonerate:protein2genome:local exon 1623262 1623452 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1623262 1915500 545 - . alignment_id 0 ; Query GL50803_117204-t26_1-p1 ; Align 1915501 1 126 ; Align 1915375 44 72 ; Align 1780504 68 66 ; Align 1780438 91 60 ; Align 1780378 112 234 ; Align 1623451 191 189 utg349_pilon exonerate:protein2genome:local gene 915457 915528 123 - . gene_id 0 ; sequence GL50803_11721-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 915457 915528 . - . utg349_pilon exonerate:protein2genome:local exon 915457 915528 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 915457 915528 123 - . alignment_id 0 ; Query GL50803_11721-t26_1-p1 ; Align 915529 2 72 utg47_pilon exonerate:protein2genome:local gene 1625790 1863364 595 - . gene_id 0 ; sequence GL50803_117391-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1863345 1863364 . - . utg47_pilon exonerate:protein2genome:local exon 1863345 1863364 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1863343 1863344 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1789993 1863344 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1789993 1789994 . - . intron_id 0 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local cds 1789913 1789992 . - . utg47_pilon exonerate:protein2genome:local exon 1789913 1789992 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1789911 1789912 . - . intron_id 2 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1626288 1789912 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1626288 1626289 . - . intron_id 1 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1625790 1626287 . - . utg47_pilon exonerate:protein2genome:local exon 1625790 1626287 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1625790 1863364 595 - . alignment_id 0 ; Query GL50803_117391-t26_1-p1 ; Align 1863365 1 18 ; Align 1789992 8 78 ; Align 1626286 35 108 ; Align 1626177 71 387 utg47_pilon exonerate:protein2genome:local gene 1625790 1863364 595 - . gene_id 0 ; sequence GL50803_117392-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1863345 1863364 . - . utg47_pilon exonerate:protein2genome:local exon 1863345 1863364 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1863343 1863344 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1789993 1863344 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1789993 1789994 . - . intron_id 0 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local cds 1789913 1789992 . - . utg47_pilon exonerate:protein2genome:local exon 1789913 1789992 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1789911 1789912 . - . intron_id 2 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1626288 1789912 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1626288 1626289 . - . intron_id 1 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1625790 1626287 . - . utg47_pilon exonerate:protein2genome:local exon 1625790 1626287 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1625790 1863364 595 - . alignment_id 0 ; Query GL50803_117392-t26_1-p1 ; Align 1863365 1 18 ; Align 1789992 8 78 ; Align 1626286 35 108 ; Align 1626177 71 387 utg47_pilon exonerate:protein2genome:local gene 1625790 1863364 595 - . gene_id 0 ; sequence GL50803_117393-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1863345 1863364 . - . utg47_pilon exonerate:protein2genome:local exon 1863345 1863364 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1863343 1863344 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1789993 1863344 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1789993 1789994 . - . intron_id 0 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local cds 1789913 1789992 . - . utg47_pilon exonerate:protein2genome:local exon 1789913 1789992 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1789911 1789912 . - . intron_id 2 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1626288 1789912 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1626288 1626289 . - . intron_id 1 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1625790 1626287 . - . utg47_pilon exonerate:protein2genome:local exon 1625790 1626287 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1625790 1863364 595 - . alignment_id 0 ; Query GL50803_117393-t26_1-p1 ; Align 1863365 1 18 ; Align 1789992 8 78 ; Align 1626286 35 108 ; Align 1626177 71 387 utg349_pilon exonerate:protein2genome:local gene 1266410 1267486 1721 - . gene_id 0 ; sequence GL50803_11740-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1266410 1267486 . - . utg349_pilon exonerate:protein2genome:local exon 1266410 1267486 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1266410 1267486 1721 - . alignment_id 0 ; Query GL50803_11740-t26_1-p1 ; Align 1267487 1 369 ; Align 1267118 125 708 utg349_pilon exonerate:protein2genome:local gene 1268704 1270366 2016 + . gene_id 0 ; sequence GL50803_11742-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1268704 1270366 . + . utg349_pilon exonerate:protein2genome:local exon 1268704 1270366 . + . insertions 9 ; deletions 3 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 1268704 1270366 2016 + . alignment_id 0 ; Query GL50803_11742-t26_1-p1 ; Align 1268704 1 585 ; Align 1269289 199 378 ; Align 1269668 325 195 ; Align 1269872 390 495 utg349_pilon exonerate:protein2genome:local gene 1270483 1271907 1449 + . gene_id 0 ; sequence GL50803_11743-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1270483 1271907 . + . utg349_pilon exonerate:protein2genome:local exon 1270483 1271907 . + . insertions 21 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 1270483 1271907 1449 + . alignment_id 0 ; Query GL50803_11743-t26_1-p1 ; Align 1270483 1 636 ; Align 1271119 214 48 ; Align 1271173 230 96 ; Align 1271269 263 105 ; Align 1271386 298 228 ; Align 1271617 374 291 utg47_pilon exonerate:protein2genome:local gene 179703 180233 413 - . gene_id 0 ; sequence GL50803_117436-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 180046 180233 . - . utg47_pilon exonerate:protein2genome:local exon 180046 180233 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 180044 180045 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 179953 180045 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 179953 179954 . - . intron_id 0 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local cds 179703 179952 . - . utg47_pilon exonerate:protein2genome:local exon 179703 179952 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 179703 180233 413 - . alignment_id 0 ; Query GL50803_117436-t26_1-p1 ; Align 180234 1 186 ; Align 179952 64 249 utg47_pilon exonerate:protein2genome:local gene 179703 180233 413 - . gene_id 0 ; sequence GL50803_117437-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 180046 180233 . - . utg47_pilon exonerate:protein2genome:local exon 180046 180233 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 180044 180045 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 179953 180045 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 179953 179954 . - . intron_id 0 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local cds 179703 179952 . - . utg47_pilon exonerate:protein2genome:local exon 179703 179952 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 179703 180233 413 - . alignment_id 0 ; Query GL50803_117437-t26_1-p1 ; Align 180234 1 186 ; Align 179952 64 249 utg18_pilon exonerate:protein2genome:local gene 441363 561525 727 - . gene_id 0 ; sequence GL50803_117440-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 560763 561525 . - . utg18_pilon exonerate:protein2genome:local exon 560763 561525 . - . insertions 9 ; deletions 2 utg18_pilon exonerate:protein2genome:local splice5 560761 560762 . - . intron_id 1 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 441428 560762 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 441428 441429 . - . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 441363 441427 . - . utg18_pilon exonerate:protein2genome:local exon 441363 441427 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 441363 561525 727 - . alignment_id 0 ; Query GL50803_117440-t26_1-p1 ; Align 561526 1 87 ; Align 561436 30 348 ; Align 561088 147 81 ; Align 561001 174 90 ; Align 560911 205 147 ; Align 441426 255 63 utg18_pilon exonerate:protein2genome:local gene 441363 561525 727 - . gene_id 0 ; sequence GL50803_117441-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 560763 561525 . - . utg18_pilon exonerate:protein2genome:local exon 560763 561525 . - . insertions 9 ; deletions 2 utg18_pilon exonerate:protein2genome:local splice5 560761 560762 . - . intron_id 1 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 441428 560762 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 441428 441429 . - . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 441363 441427 . - . utg18_pilon exonerate:protein2genome:local exon 441363 441427 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 441363 561525 727 - . alignment_id 0 ; Query GL50803_117441-t26_1-p1 ; Align 561526 1 87 ; Align 561436 30 348 ; Align 561088 147 81 ; Align 561001 174 90 ; Align 560911 205 147 ; Align 441426 255 63 utg11_pilon exonerate:protein2genome:local gene 1024799 1159319 621 - . gene_id 0 ; sequence GL50803_117472-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1159013 1159319 . - . utg11_pilon exonerate:protein2genome:local exon 1159013 1159319 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1159011 1159012 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1025014 1159012 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1025014 1025015 . - . intron_id 0 ; splice_site "TG" utg11_pilon exonerate:protein2genome:local cds 1024799 1025013 . - . utg11_pilon exonerate:protein2genome:local exon 1024799 1025013 . - . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1024799 1159319 621 - . alignment_id 0 ; Query GL50803_117472-t26_1-p1 ; Align 1159320 27 306 ; Align 1025012 130 42 ; Align 1024970 145 33 ; Align 1024934 156 135 utg11_pilon exonerate:protein2genome:local gene 1024799 1159319 621 - . gene_id 0 ; sequence GL50803_117473-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1159013 1159319 . - . utg11_pilon exonerate:protein2genome:local exon 1159013 1159319 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1159011 1159012 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1025014 1159012 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1025014 1025015 . - . intron_id 0 ; splice_site "TG" utg11_pilon exonerate:protein2genome:local cds 1024799 1025013 . - . utg11_pilon exonerate:protein2genome:local exon 1024799 1025013 . - . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1024799 1159319 621 - . alignment_id 0 ; Query GL50803_117473-t26_1-p1 ; Align 1159320 27 306 ; Align 1025012 130 42 ; Align 1024970 145 33 ; Align 1024934 156 135 utg47_pilon exonerate:protein2genome:local gene 530633 530749 163 - . gene_id 0 ; sequence GL50803_117476-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 530633 530749 . - . utg47_pilon exonerate:protein2genome:local exon 530633 530749 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 530633 530749 163 - . alignment_id 0 ; Query GL50803_117476-t26_1-p1 ; Align 530750 1 117 utg349_pilon exonerate:protein2genome:local gene 1276438 1277112 890 + . gene_id 0 ; sequence GL50803_11749-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1276438 1277112 . + . utg349_pilon exonerate:protein2genome:local exon 1276438 1277112 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1276438 1277112 890 + . alignment_id 0 ; Query GL50803_11749-t26_1-p1 ; Align 1276438 1 675 utg349_pilon exonerate:protein2genome:local gene 1279332 1280345 1153 - . gene_id 0 ; sequence GL50803_11752-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1279332 1280345 . - . utg349_pilon exonerate:protein2genome:local exon 1279332 1280345 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1279332 1280345 1153 - . alignment_id 0 ; Query GL50803_11752-t26_1-p1 ; Align 1280346 75 1014 utg349_pilon exonerate:protein2genome:local gene 1282716 1283495 1324 + . gene_id 0 ; sequence GL50803_11755-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1282716 1283495 . + . utg349_pilon exonerate:protein2genome:local exon 1282716 1283495 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1282716 1283495 1324 + . alignment_id 0 ; Query GL50803_11755-t26_1-p1 ; Align 1282716 1 780 utg349_pilon exonerate:protein2genome:local gene 1288374 1289741 1899 - . gene_id 0 ; sequence GL50803_11761-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1288374 1289741 . - . utg349_pilon exonerate:protein2genome:local exon 1288374 1289741 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1288374 1289741 1899 - . alignment_id 0 ; Query GL50803_11761-t26_1-p1 ; Align 1289742 1 1368 utg11_pilon exonerate:protein2genome:local gene 1752715 1752960 123 - . gene_id 0 ; sequence GL50803_117617-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1752715 1752960 . - . utg11_pilon exonerate:protein2genome:local exon 1752715 1752960 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1752715 1752960 123 - . alignment_id 0 ; Query GL50803_117617-t26_1-p1 ; Align 1752961 17 246 utg11_pilon exonerate:protein2genome:local gene 1752715 1752960 123 - . gene_id 0 ; sequence GL50803_117618-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1752715 1752960 . - . utg11_pilon exonerate:protein2genome:local exon 1752715 1752960 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1752715 1752960 123 - . alignment_id 0 ; Query GL50803_117618-t26_1-p1 ; Align 1752961 17 246 utg349_pilon exonerate:protein2genome:local gene 1291409 1291900 596 + . gene_id 0 ; sequence GL50803_11763-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1291409 1291900 . + . utg349_pilon exonerate:protein2genome:local exon 1291409 1291900 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1291409 1291900 596 + . alignment_id 0 ; Query GL50803_11763-t26_1-p1 ; Align 1291409 3 492 utg47_pilon exonerate:protein2genome:local gene 1625538 1625992 374 - . gene_id 0 ; sequence GL50803_117654-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1625538 1625992 . - . utg47_pilon exonerate:protein2genome:local exon 1625538 1625992 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1625538 1625992 374 - . alignment_id 0 ; Query GL50803_117654-t26_1-p1 ; Align 1625993 1 204 ; Align 1625787 70 249 utg47_pilon exonerate:protein2genome:local gene 1625538 1625992 374 - . gene_id 0 ; sequence GL50803_117655-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1625538 1625992 . - . utg47_pilon exonerate:protein2genome:local exon 1625538 1625992 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1625538 1625992 374 - . alignment_id 0 ; Query GL50803_117655-t26_1-p1 ; Align 1625993 1 204 ; Align 1625787 70 249 utg47_pilon exonerate:protein2genome:local gene 1625538 1625992 374 - . gene_id 0 ; sequence GL50803_117656-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1625538 1625992 . - . utg47_pilon exonerate:protein2genome:local exon 1625538 1625992 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1625538 1625992 374 - . alignment_id 0 ; Query GL50803_117656-t26_1-p1 ; Align 1625993 1 204 ; Align 1625787 70 249 utg349_pilon exonerate:protein2genome:local gene 1297773 1298303 861 + . gene_id 0 ; sequence GL50803_11771-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1297773 1298303 . + . utg349_pilon exonerate:protein2genome:local exon 1297773 1298303 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1297773 1298303 861 + . alignment_id 0 ; Query GL50803_11771-t26_1-p1 ; Align 1297773 1 531 utg349_pilon exonerate:protein2genome:local gene 1298484 1299587 1783 + . gene_id 0 ; sequence GL50803_11772-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1298484 1299587 . + . utg349_pilon exonerate:protein2genome:local exon 1298484 1299587 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1298484 1299587 1783 + . alignment_id 0 ; Query GL50803_11772-t26_1-p1 ; Align 1298484 43 1104 utg349_pilon exonerate:protein2genome:local gene 1301529 1306382 7274 + . gene_id 0 ; sequence GL50803_11775-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1301529 1306382 . + . utg349_pilon exonerate:protein2genome:local exon 1301529 1306382 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1301529 1306382 7274 + . alignment_id 0 ; Query GL50803_11775-t26_1-p1 ; Align 1301529 1 4854 utg265_pilon exonerate:protein2genome:local gene 1023729 1023884 153 - . gene_id 0 ; sequence GL50803_11783-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1023729 1023884 . - . utg265_pilon exonerate:protein2genome:local exon 1023729 1023884 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1023729 1023884 153 - . alignment_id 0 ; Query GL50803_11783-t26_1-p1 ; Align 1023885 1 156 utg349_pilon exonerate:protein2genome:local gene 1521798 1521968 171 + . gene_id 0 ; sequence GL50803_11785-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1521798 1521968 . + . utg349_pilon exonerate:protein2genome:local exon 1521798 1521968 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1521798 1521968 171 + . alignment_id 0 ; Query GL50803_11785-t26_1-p1 ; Align 1521798 3 171 utg349_pilon exonerate:protein2genome:local gene 1527409 1527579 171 - . gene_id 0 ; sequence GL50803_11785-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1527409 1527579 . - . utg349_pilon exonerate:protein2genome:local exon 1527409 1527579 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1527409 1527579 171 - . alignment_id 0 ; Query GL50803_11785-t26_1-p1 ; Align 1527580 3 171 utg349_pilon exonerate:protein2genome:local gene 1435529 1435690 225 + . gene_id 0 ; sequence GL50803_118132-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1435529 1435690 . + . utg349_pilon exonerate:protein2genome:local exon 1435529 1435690 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1435529 1435690 225 + . alignment_id 0 ; Query GL50803_118132-t26_1-p1 ; Align 1435529 2 162 utg349_pilon exonerate:protein2genome:local gene 1462751 1462912 225 - . gene_id 0 ; sequence GL50803_118132-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1462751 1462912 . - . utg349_pilon exonerate:protein2genome:local exon 1462751 1462912 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1462751 1462912 225 - . alignment_id 0 ; Query GL50803_118132-t26_1-p1 ; Align 1462913 2 162 utg349_pilon exonerate:protein2genome:local gene 1435529 1435690 225 + . gene_id 0 ; sequence GL50803_118133-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1435529 1435690 . + . utg349_pilon exonerate:protein2genome:local exon 1435529 1435690 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1435529 1435690 225 + . alignment_id 0 ; Query GL50803_118133-t26_1-p1 ; Align 1435529 2 162 utg349_pilon exonerate:protein2genome:local gene 1462751 1462912 225 - . gene_id 0 ; sequence GL50803_118133-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1462751 1462912 . - . utg349_pilon exonerate:protein2genome:local exon 1462751 1462912 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1462751 1462912 225 - . alignment_id 0 ; Query GL50803_118133-t26_1-p1 ; Align 1462913 2 162 utg731_pilon exonerate:protein2genome:local gene 1426059 1426352 148 + . gene_id 0 ; sequence GL50803_118156-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1426059 1426352 . + . utg731_pilon exonerate:protein2genome:local exon 1426059 1426352 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1426059 1426352 148 + . alignment_id 0 ; Query GL50803_118156-t26_1-p1 ; Align 1426059 4 153 ; Align 1426212 56 141 utg731_pilon exonerate:protein2genome:local gene 1426059 1426352 148 + . gene_id 0 ; sequence GL50803_118157-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1426059 1426352 . + . utg731_pilon exonerate:protein2genome:local exon 1426059 1426352 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1426059 1426352 148 + . alignment_id 0 ; Query GL50803_118157-t26_1-p1 ; Align 1426059 4 153 ; Align 1426212 56 141 utg349_pilon exonerate:protein2genome:local gene 1435529 1435690 225 + . gene_id 0 ; sequence GL50803_118180-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1435529 1435690 . + . utg349_pilon exonerate:protein2genome:local exon 1435529 1435690 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1435529 1435690 225 + . alignment_id 0 ; Query GL50803_118180-t26_1-p1 ; Align 1435529 2 162 utg349_pilon exonerate:protein2genome:local gene 1462751 1462912 225 - . gene_id 0 ; sequence GL50803_118180-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1462751 1462912 . - . utg349_pilon exonerate:protein2genome:local exon 1462751 1462912 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1462751 1462912 225 - . alignment_id 0 ; Query GL50803_118180-t26_1-p1 ; Align 1462913 2 162 utg349_pilon exonerate:protein2genome:local gene 1435529 1435690 225 + . gene_id 0 ; sequence GL50803_118181-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1435529 1435690 . + . utg349_pilon exonerate:protein2genome:local exon 1435529 1435690 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1435529 1435690 225 + . alignment_id 0 ; Query GL50803_118181-t26_1-p1 ; Align 1435529 2 162 utg349_pilon exonerate:protein2genome:local gene 1462751 1462912 225 - . gene_id 0 ; sequence GL50803_118181-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1462751 1462912 . - . utg349_pilon exonerate:protein2genome:local exon 1462751 1462912 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1462751 1462912 225 - . alignment_id 0 ; Query GL50803_118181-t26_1-p1 ; Align 1462913 2 162 utg731_pilon exonerate:protein2genome:local gene 387388 387705 289 - . gene_id 0 ; sequence GL50803_118299-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 387388 387705 . - . utg731_pilon exonerate:protein2genome:local exon 387388 387705 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 387388 387705 289 - . alignment_id 0 ; Query GL50803_118299-t26_1-p1 ; Align 387706 1 318 utg731_pilon exonerate:protein2genome:local gene 387388 387705 289 - . gene_id 0 ; sequence GL50803_118300-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 387388 387705 . - . utg731_pilon exonerate:protein2genome:local exon 387388 387705 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 387388 387705 289 - . alignment_id 0 ; Query GL50803_118300-t26_1-p1 ; Align 387706 1 318 utg11_pilon exonerate:protein2genome:local gene 1753229 1753444 168 + . gene_id 0 ; sequence GL50803_118456-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1753229 1753444 . + . utg11_pilon exonerate:protein2genome:local exon 1753229 1753444 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1753229 1753444 168 + . alignment_id 0 ; Query GL50803_118456-t26_1-p1 ; Align 1753229 3 216 utg11_pilon exonerate:protein2genome:local gene 1753229 1753444 168 + . gene_id 0 ; sequence GL50803_118457-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1753229 1753444 . + . utg11_pilon exonerate:protein2genome:local exon 1753229 1753444 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1753229 1753444 168 + . alignment_id 0 ; Query GL50803_118457-t26_1-p1 ; Align 1753229 3 216 utg308_pilon exonerate:protein2genome:local gene 314338 315464 1366 - . gene_id 0 ; sequence GL50803_118516-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 314338 315464 . - . utg308_pilon exonerate:protein2genome:local exon 314338 315464 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 314338 315464 1366 - . alignment_id 0 ; Query GL50803_118516-t26_1-p1 ; Align 315465 1 408 ; Align 315055 137 6 ; Align 315049 140 711 utg308_pilon exonerate:protein2genome:local gene 314338 315464 1366 - . gene_id 0 ; sequence GL50803_118517-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 314338 315464 . - . utg308_pilon exonerate:protein2genome:local exon 314338 315464 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 314338 315464 1366 - . alignment_id 0 ; Query GL50803_118517-t26_1-p1 ; Align 315465 1 408 ; Align 315055 137 6 ; Align 315049 140 711 utg11_pilon exonerate:protein2genome:local gene 909353 939204 210 + . gene_id 0 ; sequence GL50803_118556-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 909353 909472 . + . utg11_pilon exonerate:protein2genome:local exon 909353 909472 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 909473 909474 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 909473 939111 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 939110 939111 . + . intron_id 0 ; splice_site "CA" utg11_pilon exonerate:protein2genome:local cds 939112 939204 . + . utg11_pilon exonerate:protein2genome:local exon 939112 939204 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 909353 939204 210 + . alignment_id 0 ; Query GL50803_118556-t26_1-p1 ; Align 909353 2 120 ; Align 939112 42 93 utg11_pilon exonerate:protein2genome:local gene 909353 939204 210 + . gene_id 0 ; sequence GL50803_118557-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 909353 909472 . + . utg11_pilon exonerate:protein2genome:local exon 909353 909472 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 909473 909474 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 909473 939111 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 939110 939111 . + . intron_id 0 ; splice_site "CA" utg11_pilon exonerate:protein2genome:local cds 939112 939204 . + . utg11_pilon exonerate:protein2genome:local exon 939112 939204 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 909353 939204 210 + . alignment_id 0 ; Query GL50803_118557-t26_1-p1 ; Align 909353 2 120 ; Align 939112 42 93 utg349_pilon exonerate:protein2genome:local gene 167016 229476 220 + . gene_id 0 ; sequence GL50803_118580-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 167016 167146 . + . utg349_pilon exonerate:protein2genome:local exon 167016 167146 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 167147 167148 . + . intron_id 1 ; splice_site "CT" utg349_pilon exonerate:protein2genome:local intron 167147 229298 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 229297 229298 . + . intron_id 0 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local cds 229299 229476 . + . utg349_pilon exonerate:protein2genome:local exon 229299 229476 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 167016 229476 220 + . alignment_id 0 ; Query GL50803_118580-t26_1-p1 ; Align 167016 2 129 ; Align 229300 46 177 utg349_pilon exonerate:protein2genome:local gene 167016 229476 220 + . gene_id 0 ; sequence GL50803_118581-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 167016 167146 . + . utg349_pilon exonerate:protein2genome:local exon 167016 167146 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 167147 167148 . + . intron_id 1 ; splice_site "CT" utg349_pilon exonerate:protein2genome:local intron 167147 229298 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 229297 229298 . + . intron_id 0 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local cds 229299 229476 . + . utg349_pilon exonerate:protein2genome:local exon 229299 229476 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 167016 229476 220 + . alignment_id 0 ; Query GL50803_118581-t26_1-p1 ; Align 167016 2 129 ; Align 229300 46 177 utg11_pilon exonerate:protein2genome:local gene 1159177 1159311 153 + . gene_id 0 ; sequence GL50803_118590-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1159177 1159311 . + . utg11_pilon exonerate:protein2genome:local exon 1159177 1159311 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1159177 1159311 153 + . alignment_id 0 ; Query GL50803_118590-t26_1-p1 ; Align 1159177 8 135 utg731_pilon exonerate:protein2genome:local gene 1239246 1239380 153 - . gene_id 0 ; sequence GL50803_118590-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1239246 1239380 . - . utg731_pilon exonerate:protein2genome:local exon 1239246 1239380 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1239246 1239380 153 - . alignment_id 0 ; Query GL50803_118590-t26_1-p1 ; Align 1239381 8 135 utg11_pilon exonerate:protein2genome:local gene 1159177 1159311 153 + . gene_id 0 ; sequence GL50803_118591-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1159177 1159311 . + . utg11_pilon exonerate:protein2genome:local exon 1159177 1159311 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1159177 1159311 153 + . alignment_id 0 ; Query GL50803_118591-t26_1-p1 ; Align 1159177 8 135 utg731_pilon exonerate:protein2genome:local gene 1239246 1239380 153 - . gene_id 0 ; sequence GL50803_118591-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1239246 1239380 . - . utg731_pilon exonerate:protein2genome:local exon 1239246 1239380 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1239246 1239380 153 - . alignment_id 0 ; Query GL50803_118591-t26_1-p1 ; Align 1239381 8 135 utg99_pilon exonerate:protein2genome:local gene 89170 163147 196 - . gene_id 0 ; sequence GL50803_118606-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 163021 163147 . - . utg99_pilon exonerate:protein2genome:local exon 163021 163147 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 163019 163020 . - . intron_id 1 ; splice_site "TT" utg99_pilon exonerate:protein2genome:local intron 89298 163020 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 89298 89299 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 89170 89297 . - . utg99_pilon exonerate:protein2genome:local exon 89170 89297 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 89170 163147 196 - . alignment_id 0 ; Query GL50803_118606-t26_1-p1 ; Align 163148 2 126 ; Align 89296 45 126 utg99_pilon exonerate:protein2genome:local gene 89170 163147 196 - . gene_id 0 ; sequence GL50803_118607-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 163021 163147 . - . utg99_pilon exonerate:protein2genome:local exon 163021 163147 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 163019 163020 . - . intron_id 1 ; splice_site "TT" utg99_pilon exonerate:protein2genome:local intron 89298 163020 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 89298 89299 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 89170 89297 . - . utg99_pilon exonerate:protein2genome:local exon 89170 89297 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 89170 163147 196 - . alignment_id 0 ; Query GL50803_118607-t26_1-p1 ; Align 163148 2 126 ; Align 89296 45 126 utg47_pilon exonerate:protein2genome:local gene 1625850 1626113 207 + . gene_id 0 ; sequence GL50803_118610-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1625850 1626113 . + . utg47_pilon exonerate:protein2genome:local exon 1625850 1626113 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1625850 1626113 207 + . alignment_id 0 ; Query GL50803_118610-t26_1-p1 ; Align 1625850 1 264 utg47_pilon exonerate:protein2genome:local gene 1625850 1626113 207 + . gene_id 0 ; sequence GL50803_118611-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1625850 1626113 . + . utg47_pilon exonerate:protein2genome:local exon 1625850 1626113 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1625850 1626113 207 + . alignment_id 0 ; Query GL50803_118611-t26_1-p1 ; Align 1625850 1 264 utg47_pilon exonerate:protein2genome:local gene 1625850 1626113 207 + . gene_id 0 ; sequence GL50803_118612-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1625850 1626113 . + . utg47_pilon exonerate:protein2genome:local exon 1625850 1626113 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1625850 1626113 207 + . alignment_id 0 ; Query GL50803_118612-t26_1-p1 ; Align 1625850 1 264 utg11_pilon exonerate:protein2genome:local gene 1600399 1600728 311 - . gene_id 0 ; sequence GL50803_118641-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1600399 1600728 . - . utg11_pilon exonerate:protein2genome:local exon 1600399 1600728 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1600399 1600728 311 - . alignment_id 0 ; Query GL50803_118641-t26_1-p1 ; Align 1600729 1 330 utg11_pilon exonerate:protein2genome:local gene 1600399 1600728 311 - . gene_id 0 ; sequence GL50803_118642-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1600399 1600728 . - . utg11_pilon exonerate:protein2genome:local exon 1600399 1600728 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1600399 1600728 311 - . alignment_id 0 ; Query GL50803_118642-t26_1-p1 ; Align 1600729 1 330 utg47_pilon exonerate:protein2genome:local gene 2248506 2248799 251 - . gene_id 0 ; sequence GL50803_11865-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2248506 2248799 . - . utg47_pilon exonerate:protein2genome:local exon 2248506 2248799 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2248506 2248799 251 - . alignment_id 0 ; Query GL50803_11865-t26_1-p1 ; Align 2248800 1 294 utg349_pilon exonerate:protein2genome:local gene 495267 647106 151 + . gene_id 0 ; sequence GL50803_118653-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 495267 495316 . + . utg349_pilon exonerate:protein2genome:local exon 495267 495316 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 495317 495318 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 495317 646811 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 646810 646811 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 646812 647106 . + . utg349_pilon exonerate:protein2genome:local exon 646812 647106 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 495267 647106 151 + . alignment_id 0 ; Query GL50803_118653-t26_1-p1 ; Align 495267 2 48 ; Align 646813 19 135 ; Align 646951 64 156 utg349_pilon exonerate:protein2genome:local gene 495267 647106 151 + . gene_id 0 ; sequence GL50803_118654-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 495267 495316 . + . utg349_pilon exonerate:protein2genome:local exon 495267 495316 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 495317 495318 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 495317 646811 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 646810 646811 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 646812 647106 . + . utg349_pilon exonerate:protein2genome:local exon 646812 647106 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 495267 647106 151 + . alignment_id 0 ; Query GL50803_118654-t26_1-p1 ; Align 495267 2 48 ; Align 646813 19 135 ; Align 646951 64 156 utg212_pilon exonerate:protein2genome:local gene 14224 111183 184 - . gene_id 0 ; sequence GL50803_118657-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 111131 111183 . - . utg212_pilon exonerate:protein2genome:local exon 111131 111183 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 111129 111130 . - . intron_id 1 ; splice_site "AT" utg212_pilon exonerate:protein2genome:local intron 14438 111130 . - . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 14438 14439 . - . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 14224 14437 . - . utg212_pilon exonerate:protein2genome:local exon 14224 14437 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14224 111183 184 - . alignment_id 0 ; Query GL50803_118657-t26_1-p1 ; Align 111184 6 51 ; Align 14437 24 213 utg212_pilon exonerate:protein2genome:local gene 14224 111183 184 - . gene_id 0 ; sequence GL50803_118658-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 111131 111183 . - . utg212_pilon exonerate:protein2genome:local exon 111131 111183 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 111129 111130 . - . intron_id 1 ; splice_site "AT" utg212_pilon exonerate:protein2genome:local intron 14438 111130 . - . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 14438 14439 . - . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 14224 14437 . - . utg212_pilon exonerate:protein2genome:local exon 14224 14437 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14224 111183 184 - . alignment_id 0 ; Query GL50803_118658-t26_1-p1 ; Align 111184 6 51 ; Align 14437 24 213 utg212_pilon exonerate:protein2genome:local gene 14224 111183 184 - . gene_id 0 ; sequence GL50803_118659-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 111131 111183 . - . utg212_pilon exonerate:protein2genome:local exon 111131 111183 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 111129 111130 . - . intron_id 1 ; splice_site "AT" utg212_pilon exonerate:protein2genome:local intron 14438 111130 . - . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 14438 14439 . - . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 14224 14437 . - . utg212_pilon exonerate:protein2genome:local exon 14224 14437 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14224 111183 184 - . alignment_id 0 ; Query GL50803_118659-t26_1-p1 ; Align 111184 6 51 ; Align 14437 24 213 utg47_pilon exonerate:protein2genome:local gene 2248461 2248928 712 + . gene_id 0 ; sequence GL50803_11866-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2248461 2248928 . + . utg47_pilon exonerate:protein2genome:local exon 2248461 2248928 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2248461 2248928 712 + . alignment_id 0 ; Query GL50803_11866-t26_1-p1 ; Align 2248461 1 468 utg11_pilon exonerate:protein2genome:local gene 328087 328266 110 - . gene_id 0 ; sequence GL50803_118669-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 328087 328266 . - . utg11_pilon exonerate:protein2genome:local exon 328087 328266 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 328087 328266 110 - . alignment_id 0 ; Query GL50803_118669-t26_1-p1 ; Align 328267 1 180 utg47_pilon exonerate:protein2genome:local gene 2247243 2248436 2001 + . gene_id 0 ; sequence GL50803_11867-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2247243 2248436 . + . utg47_pilon exonerate:protein2genome:local exon 2247243 2248436 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2247243 2248436 2001 + . alignment_id 0 ; Query GL50803_11867-t26_1-p1 ; Align 2247243 1 1194 utg11_pilon exonerate:protein2genome:local gene 328087 328266 110 - . gene_id 0 ; sequence GL50803_118670-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 328087 328266 . - . utg11_pilon exonerate:protein2genome:local exon 328087 328266 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 328087 328266 110 - . alignment_id 0 ; Query GL50803_118670-t26_1-p1 ; Align 328267 1 180 utg349_pilon exonerate:protein2genome:local gene 94304 94534 116 - . gene_id 0 ; sequence GL50803_118709-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 94304 94534 . - . utg349_pilon exonerate:protein2genome:local exon 94304 94534 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 94304 94534 116 - . alignment_id 0 ; Query GL50803_118709-t26_1-p1 ; Align 94535 1 231 utg349_pilon exonerate:protein2genome:local gene 94304 94534 116 - . gene_id 0 ; sequence GL50803_118710-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 94304 94534 . - . utg349_pilon exonerate:protein2genome:local exon 94304 94534 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 94304 94534 116 - . alignment_id 0 ; Query GL50803_118710-t26_1-p1 ; Align 94535 1 231 utg731_pilon exonerate:protein2genome:local gene 867185 871582 4192 + . gene_id 0 ; sequence GL50803_11877-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 867185 868262 . + . utg731_pilon exonerate:protein2genome:local exon 867185 868262 . + . insertions 0 ; deletions 5 utg731_pilon exonerate:protein2genome:local splice5 868263 868264 . + . intron_id 1 ; splice_site "CT" utg731_pilon exonerate:protein2genome:local intron 868263 868349 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 868348 868349 . + . intron_id 0 ; splice_site "AC" utg731_pilon exonerate:protein2genome:local cds 868350 870200 . + . utg731_pilon exonerate:protein2genome:local exon 868350 870200 . + . insertions 15 ; deletions 6 utg731_pilon exonerate:protein2genome:local splice5 870201 870202 . + . intron_id 2 ; splice_site "TT" utg731_pilon exonerate:protein2genome:local intron 870201 870230 . + . intron_id 2 utg731_pilon exonerate:protein2genome:local splice3 870229 870230 . + . intron_id 1 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 870231 871582 . + . utg731_pilon exonerate:protein2genome:local exon 870231 871582 . + . insertions 0 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 867185 871582 4192 + . alignment_id 0 ; Query GL50803_11877-t26_1-p1 ; Align 867185 1 612 ; Align 867797 206 390 ; Align 868187 340 75 ; Align 868352 366 405 ; Align 868760 501 102 ; Align 868862 536 333 ; Align 869207 647 108 ; Align 869315 684 423 ; Align 869738 826 126 ; Align 869864 871 336 ; Align 870233 984 18 ; Align 870251 992 1080 ; Align 871331 1354 252 utg99_pilon exonerate:protein2genome:local gene 91380 91535 211 - . gene_id 0 ; sequence GL50803_118786-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 91380 91535 . - . utg99_pilon exonerate:protein2genome:local exon 91380 91535 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 91380 91535 211 - . alignment_id 0 ; Query GL50803_118786-t26_1-p1 ; Align 91536 5 156 utg308_pilon exonerate:protein2genome:local gene 827087 827285 229 + . gene_id 0 ; sequence GL50803_118830-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 827087 827285 . + . utg308_pilon exonerate:protein2genome:local exon 827087 827285 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 827087 827285 229 + . alignment_id 0 ; Query GL50803_118830-t26_1-p1 ; Align 827087 1 120 ; Align 827208 41 78 utg731_pilon exonerate:protein2genome:local gene 69938 70136 229 + . gene_id 0 ; sequence GL50803_118830-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 69938 70136 . + . utg731_pilon exonerate:protein2genome:local exon 69938 70136 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 69938 70136 229 + . alignment_id 0 ; Query GL50803_118830-t26_1-p1 ; Align 69938 1 120 ; Align 70059 41 78 utg308_pilon exonerate:protein2genome:local gene 827087 827285 229 + . gene_id 0 ; sequence GL50803_118831-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 827087 827285 . + . utg308_pilon exonerate:protein2genome:local exon 827087 827285 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 827087 827285 229 + . alignment_id 0 ; Query GL50803_118831-t26_1-p1 ; Align 827087 1 120 ; Align 827208 41 78 utg731_pilon exonerate:protein2genome:local gene 69938 70136 229 + . gene_id 0 ; sequence GL50803_118831-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 69938 70136 . + . utg731_pilon exonerate:protein2genome:local exon 69938 70136 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 69938 70136 229 + . alignment_id 0 ; Query GL50803_118831-t26_1-p1 ; Align 69938 1 120 ; Align 70059 41 78 utg731_pilon exonerate:protein2genome:local gene 880001 880285 443 + . gene_id 0 ; sequence GL50803_11884-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 880001 880285 . + . utg731_pilon exonerate:protein2genome:local exon 880001 880285 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 880001 880285 443 + . alignment_id 0 ; Query GL50803_11884-t26_1-p1 ; Align 880001 1 285 utg731_pilon exonerate:protein2genome:local gene 880300 881730 1995 - . gene_id 0 ; sequence GL50803_11885-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 880300 881730 . - . utg731_pilon exonerate:protein2genome:local exon 880300 881730 . - . insertions 9 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 880300 881730 1995 - . alignment_id 0 ; Query GL50803_11885-t26_1-p1 ; Align 881731 1 1050 ; Align 880681 352 225 ; Align 880447 427 57 ; Align 880390 448 90 utg265_pilon exonerate:protein2genome:local gene 556508 590597 234 + . gene_id 0 ; sequence GL50803_118900-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 556508 556627 . + . utg265_pilon exonerate:protein2genome:local exon 556508 556627 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 556628 556629 . + . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 556628 590486 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 590485 590486 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 590487 590597 . + . utg265_pilon exonerate:protein2genome:local exon 590487 590597 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 556508 590597 234 + . alignment_id 0 ; Query GL50803_118900-t26_1-p1 ; Align 556508 1 120 ; Align 590487 41 111 utg731_pilon exonerate:protein2genome:local gene 885289 885411 141 - . gene_id 0 ; sequence GL50803_11892-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 885289 885411 . - . utg731_pilon exonerate:protein2genome:local exon 885289 885411 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 885289 885411 141 - . alignment_id 0 ; Query GL50803_11892-t26_1-p1 ; Align 885412 17 123 utg731_pilon exonerate:protein2genome:local gene 886067 888985 3555 + . gene_id 0 ; sequence GL50803_11895-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 886067 888985 . + . utg731_pilon exonerate:protein2genome:local exon 886067 888985 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 886067 888985 3555 + . alignment_id 0 ; Query GL50803_11895-t26_1-p1 ; Align 886067 1 708 ; Align 886775 238 2211 utg731_pilon exonerate:protein2genome:local gene 888999 889355 431 - . gene_id 0 ; sequence GL50803_11896-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 888999 889355 . - . utg731_pilon exonerate:protein2genome:local exon 888999 889355 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 888999 889355 431 - . alignment_id 0 ; Query GL50803_11896-t26_1-p1 ; Align 889356 1 357 utg731_pilon exonerate:protein2genome:local gene 889481 891037 2128 + . gene_id 0 ; sequence GL50803_11897-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 889481 890372 . + . utg731_pilon exonerate:protein2genome:local exon 889481 890372 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 890373 890374 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 890373 890408 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 890407 890408 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 890409 891037 . + . utg731_pilon exonerate:protein2genome:local exon 890409 891037 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 889481 891037 2128 + . alignment_id 0 ; Query GL50803_11897-t26_1-p1 ; Align 889481 1 891 ; Align 890411 299 57 ; Align 890471 318 567 utg11_pilon exonerate:protein2genome:local gene 1100002 1100142 147 - . gene_id 0 ; sequence GL50803_119036-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1100002 1100142 . - . utg11_pilon exonerate:protein2genome:local exon 1100002 1100142 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1100002 1100142 147 - . alignment_id 0 ; Query GL50803_119036-t26_1-p1 ; Align 1100143 2 141 utg11_pilon exonerate:protein2genome:local gene 1100002 1100142 147 - . gene_id 0 ; sequence GL50803_119037-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1100002 1100142 . - . utg11_pilon exonerate:protein2genome:local exon 1100002 1100142 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1100002 1100142 147 - . alignment_id 0 ; Query GL50803_119037-t26_1-p1 ; Align 1100143 2 141 utg731_pilon exonerate:protein2genome:local gene 912459 917984 7018 - . gene_id 0 ; sequence GL50803_11912-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 912459 917984 . - . utg731_pilon exonerate:protein2genome:local exon 912459 917984 . - . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 912459 917984 7018 - . alignment_id 0 ; Query GL50803_11912-t26_1-p1 ; Align 917985 1 3366 ; Align 914619 1125 1926 ; Align 912693 1768 234 utg18_pilon exonerate:protein2genome:local gene 138108 138368 226 + . gene_id 0 ; sequence GL50803_119121-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 138108 138368 . + . utg18_pilon exonerate:protein2genome:local exon 138108 138368 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 138108 138368 226 + . alignment_id 0 ; Query GL50803_119121-t26_1-p1 ; Align 138108 1 261 utg18_pilon exonerate:protein2genome:local gene 138108 138368 226 + . gene_id 0 ; sequence GL50803_119122-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 138108 138368 . + . utg18_pilon exonerate:protein2genome:local exon 138108 138368 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 138108 138368 226 + . alignment_id 0 ; Query GL50803_119122-t26_1-p1 ; Align 138108 1 261 utg349_pilon exonerate:protein2genome:local gene 1382000 1382356 389 - . gene_id 0 ; sequence GL50803_119191-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1382000 1382356 . - . utg349_pilon exonerate:protein2genome:local exon 1382000 1382356 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1382000 1382356 389 - . alignment_id 0 ; Query GL50803_119191-t26_1-p1 ; Align 1382357 1 357 utg99_pilon exonerate:protein2genome:local gene 132890 133387 645 - . gene_id 0 ; sequence GL50803_119224-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 132890 133387 . - . utg99_pilon exonerate:protein2genome:local exon 132890 133387 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 132890 133387 645 - . alignment_id 0 ; Query GL50803_119224-t26_1-p1 ; Align 133388 1 498 utg11_pilon exonerate:protein2genome:local gene 925830 926525 1041 - . gene_id 0 ; sequence GL50803_11925-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 925830 926525 . - . utg11_pilon exonerate:protein2genome:local exon 925830 926525 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 925830 926525 1041 - . alignment_id 0 ; Query GL50803_11925-t26_1-p1 ; Align 926526 1 696 utg11_pilon exonerate:protein2genome:local gene 932147 934081 2336 - . gene_id 0 ; sequence GL50803_11930-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 932147 934081 . - . utg11_pilon exonerate:protein2genome:local exon 932147 934081 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 932147 934081 2336 - . alignment_id 0 ; Query GL50803_11930-t26_1-p1 ; Align 934082 1 1887 ; Align 932195 632 48 utg11_pilon exonerate:protein2genome:local gene 934922 938815 5474 + . gene_id 0 ; sequence GL50803_11932-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 934922 938815 . + . utg11_pilon exonerate:protein2genome:local exon 934922 938815 . + . insertions 12 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 934922 938815 5474 + . alignment_id 0 ; Query GL50803_11932-t26_1-p1 ; Align 934922 1 1815 ; Align 936740 606 1200 ; Align 937949 1006 285 ; Align 938234 1102 582 utg212_pilon exonerate:protein2genome:local gene 211025 211366 528 - . gene_id 0 ; sequence GL50803_11940-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 211025 211366 . - . utg212_pilon exonerate:protein2genome:local exon 211025 211366 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 211025 211366 528 - . alignment_id 0 ; Query GL50803_11940-t26_1-p1 ; Align 211367 1 342 utg212_pilon exonerate:protein2genome:local gene 128207 128548 528 - . gene_id 0 ; sequence GL50803_11940-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 128207 128548 . - . utg212_pilon exonerate:protein2genome:local exon 128207 128548 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 128207 128548 528 - . alignment_id 0 ; Query GL50803_11940-t26_1-p1 ; Align 128549 1 342 utg349_pilon exonerate:protein2genome:local gene 872766 872873 174 + . gene_id 0 ; sequence GL50803_119492-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 872766 872873 . + . utg349_pilon exonerate:protein2genome:local exon 872766 872873 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 872766 872873 174 + . alignment_id 0 ; Query GL50803_119492-t26_1-p1 ; Align 872766 4 108 utg349_pilon exonerate:protein2genome:local gene 888782 888889 174 - . gene_id 0 ; sequence GL50803_119492-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 888782 888889 . - . utg349_pilon exonerate:protein2genome:local exon 888782 888889 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 888782 888889 174 - . alignment_id 0 ; Query GL50803_119492-t26_1-p1 ; Align 888890 4 108 utg349_pilon exonerate:protein2genome:local gene 872766 872873 174 + . gene_id 0 ; sequence GL50803_119493-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 872766 872873 . + . utg349_pilon exonerate:protein2genome:local exon 872766 872873 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 872766 872873 174 + . alignment_id 0 ; Query GL50803_119493-t26_1-p1 ; Align 872766 4 108 utg349_pilon exonerate:protein2genome:local gene 888782 888889 174 - . gene_id 0 ; sequence GL50803_119493-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 888782 888889 . - . utg349_pilon exonerate:protein2genome:local exon 888782 888889 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 888782 888889 174 - . alignment_id 0 ; Query GL50803_119493-t26_1-p1 ; Align 888890 4 108 utg11_pilon exonerate:protein2genome:local gene 953509 954045 929 + . gene_id 0 ; sequence GL50803_11950-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 953509 954045 . + . utg11_pilon exonerate:protein2genome:local exon 953509 954045 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 953509 954045 929 + . alignment_id 0 ; Query GL50803_11950-t26_1-p1 ; Align 953509 1 537 utg11_pilon exonerate:protein2genome:local gene 954186 954575 509 - . gene_id 0 ; sequence GL50803_11951-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 954186 954575 . - . utg11_pilon exonerate:protein2genome:local exon 954186 954575 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 954186 954575 509 - . alignment_id 0 ; Query GL50803_11951-t26_1-p1 ; Align 954576 1 390 utg11_pilon exonerate:protein2genome:local gene 954578 955288 928 - . gene_id 0 ; sequence GL50803_11952-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 954578 955288 . - . utg11_pilon exonerate:protein2genome:local exon 954578 955288 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 954578 955288 928 - . alignment_id 0 ; Query GL50803_11952-t26_1-p1 ; Align 955289 234 711 utg11_pilon exonerate:protein2genome:local gene 956040 959852 5548 + . gene_id 0 ; sequence GL50803_11953-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 956040 959852 . + . utg11_pilon exonerate:protein2genome:local exon 956040 959852 . + . insertions 0 ; deletions 6 utg11_pilon exonerate:protein2genome:local similarity 956040 959852 5548 + . alignment_id 0 ; Query GL50803_11953-t26_1-p1 ; Align 956040 1 2859 ; Align 958899 957 36 ; Align 958935 972 918 utg11_pilon exonerate:protein2genome:local gene 960016 960285 378 - . gene_id 0 ; sequence GL50803_11955-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 960016 960285 . - . utg11_pilon exonerate:protein2genome:local exon 960016 960285 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 960016 960285 378 - . alignment_id 0 ; Query GL50803_11955-t26_1-p1 ; Align 960286 1 270 utg11_pilon exonerate:protein2genome:local gene 960289 960597 452 - . gene_id 0 ; sequence GL50803_11956-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 960289 960597 . - . utg11_pilon exonerate:protein2genome:local exon 960289 960597 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 960289 960597 452 - . alignment_id 0 ; Query GL50803_11956-t26_1-p1 ; Align 960598 1 309 utg731_pilon exonerate:protein2genome:local gene 320647 320916 237 - . gene_id 0 ; sequence GL50803_119574-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 320647 320916 . - . utg731_pilon exonerate:protein2genome:local exon 320647 320916 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 320647 320916 237 - . alignment_id 0 ; Query GL50803_119574-t26_1-p1 ; Align 320917 1 87 ; Align 320830 31 183 utg731_pilon exonerate:protein2genome:local gene 320647 320916 237 - . gene_id 0 ; sequence GL50803_119575-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 320647 320916 . - . utg731_pilon exonerate:protein2genome:local exon 320647 320916 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 320647 320916 237 - . alignment_id 0 ; Query GL50803_119575-t26_1-p1 ; Align 320917 1 87 ; Align 320830 31 183 utg11_pilon exonerate:protein2genome:local gene 967462 967578 107 + . gene_id 0 ; sequence GL50803_11959-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 967462 967578 . + . utg11_pilon exonerate:protein2genome:local exon 967462 967578 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 967462 967578 107 + . alignment_id 0 ; Query GL50803_11959-t26_1-p1 ; Align 967462 1 117 utg11_pilon exonerate:protein2genome:local gene 966830 968350 2055 - . gene_id 0 ; sequence GL50803_11960-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 966830 968350 . - . utg11_pilon exonerate:protein2genome:local exon 966830 968350 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 966830 968350 2055 - . alignment_id 0 ; Query GL50803_11960-t26_1-p1 ; Align 968351 1 1521 utg11_pilon exonerate:protein2genome:local gene 968426 968890 764 - . gene_id 0 ; sequence GL50803_11961-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 968426 968890 . - . utg11_pilon exonerate:protein2genome:local exon 968426 968890 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 968426 968890 764 - . alignment_id 0 ; Query GL50803_11961-t26_1-p1 ; Align 968891 1 465 utg11_pilon exonerate:protein2genome:local gene 971870 972505 758 + . gene_id 0 ; sequence GL50803_11965-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 971870 972505 . + . utg11_pilon exonerate:protein2genome:local exon 971870 972505 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 971870 972505 758 + . alignment_id 0 ; Query GL50803_11965-t26_1-p1 ; Align 971870 1 636 utg11_pilon exonerate:protein2genome:local gene 1429436 1430215 158 - . gene_id 0 ; sequence GL50803_11966-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1430175 1430215 . - . utg11_pilon exonerate:protein2genome:local exon 1430175 1430215 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1430173 1430174 . - . intron_id 1 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 1430097 1430174 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1430097 1430098 . - . intron_id 0 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 1430061 1430096 . - . utg11_pilon exonerate:protein2genome:local exon 1430061 1430096 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1430059 1430060 . - . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1429488 1430060 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 1429488 1429489 . - . intron_id 1 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1429436 1429487 . - . utg11_pilon exonerate:protein2genome:local exon 1429436 1429487 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1429436 1430215 158 - . alignment_id 0 ; Query GL50803_11966-t26_1-p1 ; Align 1430216 9 39 ; Align 1430096 23 33 ; Align 1429487 35 51 utg47_pilon exonerate:protein2genome:local gene 1370858 1371215 428 + . gene_id 0 ; sequence GL50803_119672-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1370858 1371215 . + . utg47_pilon exonerate:protein2genome:local exon 1370858 1371215 . + . insertions 0 ; deletions 2 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1370858 1371215 428 + . alignment_id 0 ; Query GL50803_119672-t26_1-p1 ; Align 1370858 1 207 ; Align 1371066 71 72 ; Align 1371138 96 78 utg11_pilon exonerate:protein2genome:local gene 909334 1799448 1724 - . gene_id 0 ; sequence GL50803_119706-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1799335 1799448 . - . utg11_pilon exonerate:protein2genome:local exon 1799335 1799448 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1799333 1799334 . - . intron_id 1 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local intron 1742736 1799334 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1742736 1742737 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1742651 1742735 . - . utg11_pilon exonerate:protein2genome:local exon 1742651 1742735 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1742649 1742650 . - . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1639405 1742650 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 1639405 1639406 . - . intron_id 1 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local cds 1639326 1639404 . - . utg11_pilon exonerate:protein2genome:local exon 1639326 1639404 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1639324 1639325 . - . intron_id 3 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 1452519 1639325 . - . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 1452519 1452520 . - . intron_id 2 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local cds 1452406 1452518 . - . utg11_pilon exonerate:protein2genome:local exon 1452406 1452518 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1452404 1452405 . - . intron_id 4 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1343778 1452405 . - . intron_id 4 utg11_pilon exonerate:protein2genome:local splice3 1343778 1343779 . - . intron_id 3 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1343085 1343777 . - . utg11_pilon exonerate:protein2genome:local exon 1343085 1343777 . - . insertions 12 ; deletions 8 utg11_pilon exonerate:protein2genome:local splice5 1343083 1343084 . - . intron_id 5 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1179630 1343084 . - . intron_id 5 utg11_pilon exonerate:protein2genome:local splice3 1179630 1179631 . - . intron_id 4 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1179565 1179629 . - . utg11_pilon exonerate:protein2genome:local exon 1179565 1179629 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1179563 1179564 . - . intron_id 6 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 1063278 1179564 . - . intron_id 6 utg11_pilon exonerate:protein2genome:local splice3 1063278 1063279 . - . intron_id 5 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 1063224 1063277 . - . utg11_pilon exonerate:protein2genome:local exon 1063224 1063277 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1063222 1063223 . - . intron_id 7 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 939759 1063223 . - . intron_id 7 utg11_pilon exonerate:protein2genome:local splice3 939759 939760 . - . intron_id 6 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 939117 939758 . - . utg11_pilon exonerate:protein2genome:local exon 939117 939758 . - . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local splice5 939115 939116 . - . intron_id 8 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 909478 939116 . - . intron_id 8 utg11_pilon exonerate:protein2genome:local splice3 909478 909479 . - . intron_id 7 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 909334 909477 . - . utg11_pilon exonerate:protein2genome:local exon 909334 909477 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 909334 1799448 1724 - . alignment_id 0 ; Query GL50803_119706-t26_1-p1 ; Align 1799449 1 114 ; Align 1742736 39 21 ; Align 1742715 47 63 ; Align 1639403 69 63 ; Align 1639340 91 12 ; Align 1452518 96 111 ; Align 1343776 134 57 ; Align 1343719 154 66 ; Align 1343650 176 177 ; Align 1343470 235 27 ; Align 1343440 244 33 ; Align 1343404 255 162 ; Align 1343242 311 48 ; Align 1343194 330 18 ; Align 1343176 337 57 ; Align 1343119 357 33 ; Align 1179628 369 63 ; Align 1063278 390 54 ; Align 939759 408 162 ; Align 939597 464 291 ; Align 939306 563 189 ; Align 909478 626 144 utg11_pilon exonerate:protein2genome:local gene 909334 1799448 1724 - . gene_id 0 ; sequence GL50803_119707-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1799335 1799448 . - . utg11_pilon exonerate:protein2genome:local exon 1799335 1799448 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1799333 1799334 . - . intron_id 1 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local intron 1742736 1799334 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1742736 1742737 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1742651 1742735 . - . utg11_pilon exonerate:protein2genome:local exon 1742651 1742735 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1742649 1742650 . - . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1639405 1742650 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 1639405 1639406 . - . intron_id 1 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local cds 1639326 1639404 . - . utg11_pilon exonerate:protein2genome:local exon 1639326 1639404 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1639324 1639325 . - . intron_id 3 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 1452519 1639325 . - . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 1452519 1452520 . - . intron_id 2 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local cds 1452406 1452518 . - . utg11_pilon exonerate:protein2genome:local exon 1452406 1452518 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1452404 1452405 . - . intron_id 4 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1343778 1452405 . - . intron_id 4 utg11_pilon exonerate:protein2genome:local splice3 1343778 1343779 . - . intron_id 3 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1343085 1343777 . - . utg11_pilon exonerate:protein2genome:local exon 1343085 1343777 . - . insertions 12 ; deletions 8 utg11_pilon exonerate:protein2genome:local splice5 1343083 1343084 . - . intron_id 5 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1179630 1343084 . - . intron_id 5 utg11_pilon exonerate:protein2genome:local splice3 1179630 1179631 . - . intron_id 4 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1179565 1179629 . - . utg11_pilon exonerate:protein2genome:local exon 1179565 1179629 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1179563 1179564 . - . intron_id 6 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 1063278 1179564 . - . intron_id 6 utg11_pilon exonerate:protein2genome:local splice3 1063278 1063279 . - . intron_id 5 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 1063224 1063277 . - . utg11_pilon exonerate:protein2genome:local exon 1063224 1063277 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1063222 1063223 . - . intron_id 7 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 939759 1063223 . - . intron_id 7 utg11_pilon exonerate:protein2genome:local splice3 939759 939760 . - . intron_id 6 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 939117 939758 . - . utg11_pilon exonerate:protein2genome:local exon 939117 939758 . - . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local splice5 939115 939116 . - . intron_id 8 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 909478 939116 . - . intron_id 8 utg11_pilon exonerate:protein2genome:local splice3 909478 909479 . - . intron_id 7 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 909334 909477 . - . utg11_pilon exonerate:protein2genome:local exon 909334 909477 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 909334 1799448 1724 - . alignment_id 0 ; Query GL50803_119707-t26_1-p1 ; Align 1799449 1 114 ; Align 1742736 39 21 ; Align 1742715 47 63 ; Align 1639403 69 63 ; Align 1639340 91 12 ; Align 1452518 96 111 ; Align 1343776 134 57 ; Align 1343719 154 66 ; Align 1343650 176 177 ; Align 1343470 235 27 ; Align 1343440 244 33 ; Align 1343404 255 162 ; Align 1343242 311 48 ; Align 1343194 330 18 ; Align 1343176 337 57 ; Align 1343119 357 33 ; Align 1179628 369 63 ; Align 1063278 390 54 ; Align 939759 408 162 ; Align 939597 464 291 ; Align 939306 563 189 ; Align 909478 626 144 utg11_pilon exonerate:protein2genome:local gene 905773 906090 529 - . gene_id 0 ; sequence GL50803_11976-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 905773 906090 . - . utg11_pilon exonerate:protein2genome:local exon 905773 906090 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 905773 906090 529 - . alignment_id 0 ; Query GL50803_11976-t26_1-p1 ; Align 906091 1 318 utg64_pilon exonerate:protein2genome:local gene 567949 568677 1115 - . gene_id 0 ; sequence GL50803_11982-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 567949 568677 . - . utg64_pilon exonerate:protein2genome:local exon 567949 568677 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 567949 568677 1115 - . alignment_id 0 ; Query GL50803_11982-t26_1-p1 ; Align 568678 1 729 utg64_pilon exonerate:protein2genome:local gene 569773 570300 903 - . gene_id 0 ; sequence GL50803_11984-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 569773 570300 . - . utg64_pilon exonerate:protein2genome:local exon 569773 570300 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 569773 570300 903 - . alignment_id 0 ; Query GL50803_11984-t26_1-p1 ; Align 570301 1 528 utg265_pilon exonerate:protein2genome:local gene 668760 668945 135 + . gene_id 0 ; sequence GL50803_119853-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 668760 668945 . + . utg265_pilon exonerate:protein2genome:local exon 668760 668945 . + . insertions 12 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 668760 668945 135 + . alignment_id 0 ; Query GL50803_119853-t26_1-p1 ; Align 668760 1 96 ; Align 668868 33 78 utg265_pilon exonerate:protein2genome:local gene 668760 668945 135 + . gene_id 0 ; sequence GL50803_119854-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 668760 668945 . + . utg265_pilon exonerate:protein2genome:local exon 668760 668945 . + . insertions 12 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 668760 668945 135 + . alignment_id 0 ; Query GL50803_119854-t26_1-p1 ; Align 668760 1 96 ; Align 668868 33 78 utg64_pilon exonerate:protein2genome:local gene 578367 578822 716 + . gene_id 0 ; sequence GL50803_11990-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 578367 578822 . + . utg64_pilon exonerate:protein2genome:local exon 578367 578822 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 578367 578822 716 + . alignment_id 0 ; Query GL50803_11990-t26_1-p1 ; Align 578367 1 456 utg64_pilon exonerate:protein2genome:local gene 580255 581913 2715 + . gene_id 0 ; sequence GL50803_11992-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 580255 581913 . + . utg64_pilon exonerate:protein2genome:local exon 580255 581913 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 580255 581913 2715 + . alignment_id 0 ; Query GL50803_11992-t26_1-p1 ; Align 580255 1 1659 utg265_pilon exonerate:protein2genome:local gene 871382 884736 875 - . gene_id 0 ; sequence GL50803_119989-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 884509 884736 . - . utg265_pilon exonerate:protein2genome:local exon 884509 884736 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 884507 884508 . - . intron_id 1 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local intron 872153 884508 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 872153 872154 . - . intron_id 0 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local cds 871645 872152 . - . utg265_pilon exonerate:protein2genome:local exon 871645 872152 . - . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 871643 871644 . - . intron_id 2 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 871603 871644 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 871603 871604 . - . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 871382 871602 . - . utg265_pilon exonerate:protein2genome:local exon 871382 871602 . - . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 871382 884736 875 - . alignment_id 0 ; Query GL50803_119989-t26_1-p1 ; Align 884737 13 228 ; Align 872153 89 111 ; Align 872039 126 393 ; Align 871601 258 81 ; Align 871520 289 138 utg11_pilon exonerate:protein2genome:local gene 386042 386257 194 + . gene_id 0 ; sequence GL50803_119991-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 386042 386155 . + . utg11_pilon exonerate:protein2genome:local exon 386042 386155 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 386156 386157 . + . intron_id 1 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 386156 386188 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 386187 386188 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 386189 386257 . + . utg11_pilon exonerate:protein2genome:local exon 386189 386257 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 386042 386257 194 + . alignment_id 0 ; Query GL50803_119991-t26_1-p1 ; Align 386042 22 114 ; Align 386189 60 69 utg99_pilon exonerate:protein2genome:local gene 155430 155603 130 + . gene_id 0 ; sequence GL50803_120001-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 155430 155603 . + . utg99_pilon exonerate:protein2genome:local exon 155430 155603 . + . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 155430 155603 130 + . alignment_id 0 ; Query GL50803_120001-t26_1-p1 ; Align 155430 26 42 ; Align 155472 41 132 utg99_pilon exonerate:protein2genome:local gene 155430 155603 130 + . gene_id 0 ; sequence GL50803_120002-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 155430 155603 . + . utg99_pilon exonerate:protein2genome:local exon 155430 155603 . + . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 155430 155603 130 + . alignment_id 0 ; Query GL50803_120002-t26_1-p1 ; Align 155430 26 42 ; Align 155472 41 132 utg731_pilon exonerate:protein2genome:local gene 325806 327995 2766 - . gene_id 0 ; sequence GL50803_12028-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 325806 327995 . - . utg731_pilon exonerate:protein2genome:local exon 325806 327995 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 325806 327995 2766 - . alignment_id 0 ; Query GL50803_12028-t26_1-p1 ; Align 327996 1 2190 utg11_pilon exonerate:protein2genome:local gene 1600009 1600335 495 + . gene_id 0 ; sequence GL50803_120293-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1600009 1600335 . + . utg11_pilon exonerate:protein2genome:local exon 1600009 1600335 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1600009 1600335 495 + . alignment_id 0 ; Query GL50803_120293-t26_1-p1 ; Align 1600009 1 327 utg11_pilon exonerate:protein2genome:local gene 1600009 1600335 495 + . gene_id 0 ; sequence GL50803_120294-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1600009 1600335 . + . utg11_pilon exonerate:protein2genome:local exon 1600009 1600335 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1600009 1600335 495 + . alignment_id 0 ; Query GL50803_120294-t26_1-p1 ; Align 1600009 1 327 utg731_pilon exonerate:protein2genome:local gene 300123 300263 204 - . gene_id 0 ; sequence GL50803_12031-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 300123 300263 . - . utg731_pilon exonerate:protein2genome:local exon 300123 300263 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 300123 300263 204 - . alignment_id 0 ; Query GL50803_12031-t26_1-p1 ; Align 300264 1 141 utg731_pilon exonerate:protein2genome:local gene 318331 319014 777 - . gene_id 0 ; sequence GL50803_12035-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 318331 319014 . - . utg731_pilon exonerate:protein2genome:local exon 318331 319014 . - . insertions 6 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 318331 319014 777 - . alignment_id 0 ; Query GL50803_12035-t26_1-p1 ; Align 319015 1 180 ; Align 318829 61 261 ; Align 318568 153 237 utg731_pilon exonerate:protein2genome:local gene 308825 309550 937 - . gene_id 0 ; sequence GL50803_12046-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 308825 309550 . - . utg731_pilon exonerate:protein2genome:local exon 308825 309550 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 308825 309550 937 - . alignment_id 0 ; Query GL50803_12046-t26_1-p1 ; Align 309551 1 495 ; Align 309056 168 231 utg11_pilon exonerate:protein2genome:local gene 649534 649752 258 - . gene_id 0 ; sequence GL50803_120517-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 649534 649752 . - . utg11_pilon exonerate:protein2genome:local exon 649534 649752 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 649534 649752 258 - . alignment_id 0 ; Query GL50803_120517-t26_1-p1 ; Align 649753 1 219 utg11_pilon exonerate:protein2genome:local gene 649534 649752 258 - . gene_id 0 ; sequence GL50803_120518-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 649534 649752 . - . utg11_pilon exonerate:protein2genome:local exon 649534 649752 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 649534 649752 258 - . alignment_id 0 ; Query GL50803_120518-t26_1-p1 ; Align 649753 1 219 utg11_pilon exonerate:protein2genome:local gene 1763844 1767437 4820 + . gene_id 0 ; sequence GL50803_12055-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1763844 1767437 . + . utg11_pilon exonerate:protein2genome:local exon 1763844 1767437 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1763844 1767437 4820 + . alignment_id 0 ; Query GL50803_12055-t26_1-p1 ; Align 1763844 1 3594 utg11_pilon exonerate:protein2genome:local gene 1767461 1768447 1079 - . gene_id 0 ; sequence GL50803_12056-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1767461 1768447 . - . utg11_pilon exonerate:protein2genome:local exon 1767461 1768447 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1767461 1768447 1079 - . alignment_id 0 ; Query GL50803_12056-t26_1-p1 ; Align 1768448 5 240 ; Align 1768208 86 747 utg11_pilon exonerate:protein2genome:local gene 1768473 1770725 3338 + . gene_id 0 ; sequence GL50803_12057-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1768473 1770725 . + . utg11_pilon exonerate:protein2genome:local exon 1768473 1770725 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1768473 1770725 3338 + . alignment_id 0 ; Query GL50803_12057-t26_1-p1 ; Align 1768473 1 330 ; Align 1768806 111 1920 utg11_pilon exonerate:protein2genome:local gene 1771651 1773093 1638 - . gene_id 0 ; sequence GL50803_12058-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1771651 1773093 . - . utg11_pilon exonerate:protein2genome:local exon 1771651 1773093 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1771651 1773093 1638 - . alignment_id 0 ; Query GL50803_12058-t26_1-p1 ; Align 1773094 6 1443 utg11_pilon exonerate:protein2genome:local gene 1773050 1776271 3808 + . gene_id 0 ; sequence GL50803_12059-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1773050 1776271 . + . utg11_pilon exonerate:protein2genome:local exon 1773050 1776271 . + . insertions 0 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 1773050 1776271 3808 + . alignment_id 0 ; Query GL50803_12059-t26_1-p1 ; Align 1773050 26 333 ; Align 1773383 138 174 ; Align 1773557 200 2715 utg99_pilon exonerate:protein2genome:local gene 401064 401168 152 + . gene_id 0 ; sequence GL50803_1206-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 401064 401168 . + . utg99_pilon exonerate:protein2genome:local exon 401064 401168 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 401064 401168 152 + . alignment_id 0 ; Query GL50803_1206-t26_1-p1 ; Align 401064 10 105 utg11_pilon exonerate:protein2genome:local gene 1777268 1777363 141 + . gene_id 0 ; sequence GL50803_12061-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1777268 1777363 . + . utg11_pilon exonerate:protein2genome:local exon 1777268 1777363 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1777268 1777363 141 + . alignment_id 0 ; Query GL50803_12061-t26_1-p1 ; Align 1777268 1 96 utg11_pilon exonerate:protein2genome:local gene 1777406 1778206 1273 - . gene_id 0 ; sequence GL50803_12062-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1777406 1778206 . - . utg11_pilon exonerate:protein2genome:local exon 1777406 1778206 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1777406 1778206 1273 - . alignment_id 0 ; Query GL50803_12062-t26_1-p1 ; Align 1778207 1 801 utg11_pilon exonerate:protein2genome:local gene 1778261 1779502 1999 - . gene_id 0 ; sequence GL50803_12063-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1778261 1779502 . - . utg11_pilon exonerate:protein2genome:local exon 1778261 1779502 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1778261 1779502 1999 - . alignment_id 0 ; Query GL50803_12063-t26_1-p1 ; Align 1779503 1 735 ; Align 1778765 246 504 utg11_pilon exonerate:protein2genome:local gene 1780406 1782046 2204 + . gene_id 0 ; sequence GL50803_12066-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1780406 1782046 . + . utg11_pilon exonerate:protein2genome:local exon 1780406 1782046 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1780406 1782046 2204 + . alignment_id 0 ; Query GL50803_12066-t26_1-p1 ; Align 1780406 1 1317 ; Align 1781726 440 321 utg11_pilon exonerate:protein2genome:local gene 1787226 1788803 2371 - . gene_id 0 ; sequence GL50803_12071-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1787226 1788803 . - . utg11_pilon exonerate:protein2genome:local exon 1787226 1788803 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1787226 1788803 2371 - . alignment_id 0 ; Query GL50803_12071-t26_1-p1 ; Align 1788804 1 1578 utg11_pilon exonerate:protein2genome:local gene 1790138 1791730 2251 + . gene_id 0 ; sequence GL50803_12074-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1790138 1791730 . + . utg11_pilon exonerate:protein2genome:local exon 1790138 1791730 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1790138 1791730 2251 + . alignment_id 0 ; Query GL50803_12074-t26_1-p1 ; Align 1790138 1 1593 utg18_pilon exonerate:protein2genome:local gene 457753 462192 6024 - . gene_id 0 ; sequence GL50803_12081-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 457753 462192 . - . utg18_pilon exonerate:protein2genome:local exon 457753 462192 . - . insertions 3 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 457753 462192 6024 - . alignment_id 0 ; Query GL50803_12081-t26_1-p1 ; Align 462193 1 657 ; Align 461533 220 780 ; Align 460753 481 3000 utg18_pilon exonerate:protein2genome:local gene 462399 463111 938 - . gene_id 0 ; sequence GL50803_12082-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 462399 463111 . - . utg18_pilon exonerate:protein2genome:local exon 462399 463111 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local similarity 462399 463111 938 - . alignment_id 0 ; Query GL50803_12082-t26_1-p1 ; Align 463112 1 420 ; Align 462690 142 291 utg18_pilon exonerate:protein2genome:local gene 464445 464591 216 + . gene_id 0 ; sequence GL50803_12084-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 464445 464591 . + . utg18_pilon exonerate:protein2genome:local exon 464445 464591 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 464445 464591 216 + . alignment_id 0 ; Query GL50803_12084-t26_1-p1 ; Align 464445 1 147 utg18_pilon exonerate:protein2genome:local gene 471192 471311 141 + . gene_id 0 ; sequence GL50803_12088-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 471192 471311 . + . utg18_pilon exonerate:protein2genome:local exon 471192 471311 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 471192 471311 141 + . alignment_id 0 ; Query GL50803_12088-t26_1-p1 ; Align 471192 1 120 utg18_pilon exonerate:protein2genome:local gene 467535 472331 5511 - . gene_id 0 ; sequence GL50803_12089-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 467535 472331 . - . utg18_pilon exonerate:protein2genome:local exon 467535 472331 . - . insertions 12 ; deletions 5 utg18_pilon exonerate:protein2genome:local similarity 467535 472331 5511 - . alignment_id 0 ; Query GL50803_12089-t26_1-p1 ; Align 472332 1 2865 ; Align 469464 956 384 ; Align 469080 1086 60 ; Align 469017 1106 75 ; Align 468942 1132 141 ; Align 468798 1179 12 ; Align 468783 1183 693 ; Align 468090 1415 102 ; Align 467988 1450 453 utg18_pilon exonerate:protein2genome:local gene 474666 475007 558 + . gene_id 0 ; sequence GL50803_12091-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 474666 475007 . + . utg18_pilon exonerate:protein2genome:local exon 474666 475007 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 474666 475007 558 + . alignment_id 0 ; Query GL50803_12091-t26_1-p1 ; Align 474666 1 342 utg18_pilon exonerate:protein2genome:local gene 476346 477839 2057 + . gene_id 0 ; sequence GL50803_12093-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 476346 477839 . + . utg18_pilon exonerate:protein2genome:local exon 476346 477839 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 476346 477839 2057 + . alignment_id 0 ; Query GL50803_12093-t26_1-p1 ; Align 476346 1 1494 utg18_pilon exonerate:protein2genome:local gene 477889 482894 7454 + . gene_id 0 ; sequence GL50803_12094-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 477889 482894 . + . utg18_pilon exonerate:protein2genome:local exon 477889 482894 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local similarity 477889 482894 7454 + . alignment_id 0 ; Query GL50803_12094-t26_1-p1 ; Align 477889 1 1536 ; Align 479427 514 3468 utg18_pilon exonerate:protein2genome:local gene 482938 483779 1006 + . gene_id 0 ; sequence GL50803_12095-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 482938 483779 . + . utg18_pilon exonerate:protein2genome:local exon 482938 483779 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local similarity 482938 483779 1006 + . alignment_id 0 ; Query GL50803_12095-t26_1-p1 ; Align 482938 1 318 ; Align 483258 107 3 ; Align 483261 109 519 utg18_pilon exonerate:protein2genome:local gene 490639 491841 1979 + . gene_id 0 ; sequence GL50803_12102-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 490639 491841 . + . utg18_pilon exonerate:protein2genome:local exon 490639 491841 . + . insertions 0 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 490639 491841 1979 + . alignment_id 0 ; Query GL50803_12102-t26_1-p1 ; Align 490639 1 633 ; Align 491272 213 570 utg265_pilon exonerate:protein2genome:local gene 357568 357957 620 - . gene_id 0 ; sequence GL50803_121045-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 357568 357957 . - . utg265_pilon exonerate:protein2genome:local exon 357568 357957 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 357568 357957 620 - . alignment_id 0 ; Query GL50803_121045-t26_1-p1 ; Align 357958 1 390 utg265_pilon exonerate:protein2genome:local gene 350046 350435 620 - . gene_id 0 ; sequence GL50803_121045-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 350046 350435 . - . utg265_pilon exonerate:protein2genome:local exon 350046 350435 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 350046 350435 620 - . alignment_id 0 ; Query GL50803_121045-t26_1-p1 ; Align 350436 1 390 utg1966_pilon exonerate:protein2genome:local gene 15005 15394 620 + . gene_id 0 ; sequence GL50803_121045-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 15005 15394 . + . utg1966_pilon exonerate:protein2genome:local exon 15005 15394 . + . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 15005 15394 620 + . alignment_id 0 ; Query GL50803_121045-t26_1-p1 ; Align 15005 1 390 utg265_pilon exonerate:protein2genome:local gene 357568 357957 620 - . gene_id 0 ; sequence GL50803_121046-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 357568 357957 . - . utg265_pilon exonerate:protein2genome:local exon 357568 357957 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 357568 357957 620 - . alignment_id 0 ; Query GL50803_121046-t26_1-p1 ; Align 357958 1 390 utg265_pilon exonerate:protein2genome:local gene 350046 350435 620 - . gene_id 0 ; sequence GL50803_121046-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 350046 350435 . - . utg265_pilon exonerate:protein2genome:local exon 350046 350435 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 350046 350435 620 - . alignment_id 0 ; Query GL50803_121046-t26_1-p1 ; Align 350436 1 390 utg1966_pilon exonerate:protein2genome:local gene 15005 15394 620 + . gene_id 0 ; sequence GL50803_121046-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 15005 15394 . + . utg1966_pilon exonerate:protein2genome:local exon 15005 15394 . + . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 15005 15394 620 + . alignment_id 0 ; Query GL50803_121046-t26_1-p1 ; Align 15005 1 390 utg18_pilon exonerate:protein2genome:local gene 494238 496096 2824 - . gene_id 0 ; sequence GL50803_12105-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 494238 496096 . - . utg18_pilon exonerate:protein2genome:local exon 494238 496096 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local similarity 494238 496096 2824 - . alignment_id 0 ; Query GL50803_12105-t26_1-p1 ; Align 496097 1 1038 ; Align 495057 348 819 utg212_pilon exonerate:protein2genome:local gene 206734 207432 1130 - . gene_id 0 ; sequence GL50803_121061-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 206734 207432 . - . utg212_pilon exonerate:protein2genome:local exon 206734 207432 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 206734 207432 1130 - . alignment_id 0 ; Query GL50803_121061-t26_1-p1 ; Align 207433 1 699 utg212_pilon exonerate:protein2genome:local gene 206734 207432 1130 - . gene_id 0 ; sequence GL50803_121062-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 206734 207432 . - . utg212_pilon exonerate:protein2genome:local exon 206734 207432 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 206734 207432 1130 - . alignment_id 0 ; Query GL50803_121062-t26_1-p1 ; Align 207433 1 699 utg349_pilon exonerate:protein2genome:local gene 44776 146804 515 + . gene_id 0 ; sequence GL50803_121069-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 44776 44999 . + . utg349_pilon exonerate:protein2genome:local exon 44776 44999 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 45000 45001 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 45000 146638 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 146637 146638 . + . intron_id 0 ; splice_site "GA" utg349_pilon exonerate:protein2genome:local cds 146639 146804 . + . utg349_pilon exonerate:protein2genome:local exon 146639 146804 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 44776 146804 515 + . alignment_id 0 ; Query GL50803_121069-t26_1-p1 ; Align 44776 1 222 ; Align 146640 76 165 utg349_pilon exonerate:protein2genome:local gene 44776 146804 515 + . gene_id 0 ; sequence GL50803_121070-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 44776 44999 . + . utg349_pilon exonerate:protein2genome:local exon 44776 44999 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 45000 45001 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 45000 146638 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 146637 146638 . + . intron_id 0 ; splice_site "GA" utg349_pilon exonerate:protein2genome:local cds 146639 146804 . + . utg349_pilon exonerate:protein2genome:local exon 146639 146804 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 44776 146804 515 + . alignment_id 0 ; Query GL50803_121070-t26_1-p1 ; Align 44776 1 222 ; Align 146640 76 165 utg18_pilon exonerate:protein2genome:local gene 496354 499164 4599 + . gene_id 0 ; sequence GL50803_12108-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 496354 499164 . + . utg18_pilon exonerate:protein2genome:local exon 496354 499164 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 496354 499164 4599 + . alignment_id 0 ; Query GL50803_12108-t26_1-p1 ; Align 496354 1 2811 utg18_pilon exonerate:protein2genome:local gene 499193 500397 1854 - . gene_id 0 ; sequence GL50803_12109-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 499193 500397 . - . utg18_pilon exonerate:protein2genome:local exon 499193 500397 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local similarity 499193 500397 1854 - . alignment_id 0 ; Query GL50803_12109-t26_1-p1 ; Align 500398 1 1038 ; Align 499358 348 165 utg47_pilon exonerate:protein2genome:local gene 21445 24069 3650 - . gene_id 0 ; sequence GL50803_12116-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 21445 24069 . - . utg47_pilon exonerate:protein2genome:local exon 21445 24069 . - . insertions 9 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 21445 24069 3650 - . alignment_id 0 ; Query GL50803_12116-t26_1-p1 ; Align 24070 1 1323 ; Align 22738 442 258 ; Align 22480 529 393 ; Align 22087 662 642 utg47_pilon exonerate:protein2genome:local gene 25435 25914 451 + . gene_id 0 ; sequence GL50803_12118-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 25435 25914 . + . utg47_pilon exonerate:protein2genome:local exon 25435 25914 . + . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 25435 25914 451 + . alignment_id 0 ; Query GL50803_12118-t26_1-p1 ; Align 25435 9 30 ; Align 25465 21 348 ; Align 25813 138 102 utg364_pilon exonerate:protein2genome:local gene 51053 51532 451 - . gene_id 0 ; sequence GL50803_12118-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 51053 51532 . - . utg364_pilon exonerate:protein2genome:local exon 51053 51532 . - . insertions 0 ; deletions 3 utg364_pilon exonerate:protein2genome:local similarity 51053 51532 451 - . alignment_id 0 ; Query GL50803_12118-t26_1-p1 ; Align 51533 9 30 ; Align 51503 21 348 ; Align 51155 138 102 utg47_pilon exonerate:protein2genome:local gene 25800 26081 365 - . gene_id 0 ; sequence GL50803_12119-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 25800 26081 . - . utg47_pilon exonerate:protein2genome:local exon 25800 26081 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 25800 26081 365 - . alignment_id 0 ; Query GL50803_12119-t26_1-p1 ; Align 26082 1 270 ; Align 25812 92 12 utg364_pilon exonerate:protein2genome:local gene 50886 51167 365 + . gene_id 0 ; sequence GL50803_12119-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 50886 51167 . + . utg364_pilon exonerate:protein2genome:local exon 50886 51167 . + . insertions 0 ; deletions 1 utg364_pilon exonerate:protein2genome:local similarity 50886 51167 365 + . alignment_id 0 ; Query GL50803_12119-t26_1-p1 ; Align 50886 1 270 ; Align 51156 92 12 utg47_pilon exonerate:protein2genome:local gene 53426 55465 3410 + . gene_id 0 ; sequence GL50803_12139-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 53426 55465 . + . utg47_pilon exonerate:protein2genome:local exon 53426 55465 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 53426 55465 3410 + . alignment_id 0 ; Query GL50803_12139-t26_1-p1 ; Align 53426 1 2040 utg47_pilon exonerate:protein2genome:local gene 56814 57164 423 - . gene_id 0 ; sequence GL50803_12140-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 56814 57164 . - . utg47_pilon exonerate:protein2genome:local exon 56814 57164 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 56814 57164 423 - . alignment_id 0 ; Query GL50803_12140-t26_1-p1 ; Align 57165 1 351 utg364_pilon exonerate:protein2genome:local gene 8679 9029 423 + . gene_id 0 ; sequence GL50803_12140-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 8679 9029 . + . utg364_pilon exonerate:protein2genome:local exon 8679 9029 . + . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 8679 9029 423 + . alignment_id 0 ; Query GL50803_12140-t26_1-p1 ; Align 8679 1 351 utg731_pilon exonerate:protein2genome:local gene 1370696 1370800 126 - . gene_id 0 ; sequence GL50803_12145-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1370696 1370800 . - . utg731_pilon exonerate:protein2genome:local exon 1370696 1370800 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1370696 1370800 126 - . alignment_id 0 ; Query GL50803_12145-t26_1-p1 ; Align 1370801 1 105 utg731_pilon exonerate:protein2genome:local gene 1369542 1370930 1683 + . gene_id 0 ; sequence GL50803_12146-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1369542 1370249 . + . utg731_pilon exonerate:protein2genome:local exon 1369542 1370249 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1370250 1370251 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1370250 1370300 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1370299 1370300 . + . intron_id 0 ; splice_site "AA" utg731_pilon exonerate:protein2genome:local cds 1370301 1370930 . + . utg731_pilon exonerate:protein2genome:local exon 1370301 1370930 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1369542 1370930 1683 + . alignment_id 0 ; Query GL50803_12146-t26_1-p1 ; Align 1369542 1 708 ; Align 1370301 237 630 utg731_pilon exonerate:protein2genome:local gene 1368380 1369312 1267 - . gene_id 0 ; sequence GL50803_12147-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1368380 1369312 . - . utg731_pilon exonerate:protein2genome:local exon 1368380 1369312 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1368380 1369312 1267 - . alignment_id 0 ; Query GL50803_12147-t26_1-p1 ; Align 1369313 1 933 utg731_pilon exonerate:protein2genome:local gene 1365925 1368354 3252 + . gene_id 0 ; sequence GL50803_12148-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1365925 1368174 . + . utg731_pilon exonerate:protein2genome:local exon 1365925 1368174 . + . insertions 33 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1368175 1368176 . + . intron_id 1 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local intron 1368175 1368216 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1368215 1368216 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1368217 1368354 . + . utg731_pilon exonerate:protein2genome:local exon 1368217 1368354 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1365925 1368354 3252 + . alignment_id 0 ; Query GL50803_12148-t26_1-p1 ; Align 1365925 1 1134 ; Align 1367065 379 30 ; Align 1367107 389 972 ; Align 1368094 713 81 ; Align 1368217 740 138 utg731_pilon exonerate:protein2genome:local gene 1361776 1363338 2508 - . gene_id 0 ; sequence GL50803_12150-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1361776 1363338 . - . utg731_pilon exonerate:protein2genome:local exon 1361776 1363338 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1361776 1363338 2508 - . alignment_id 0 ; Query GL50803_12150-t26_1-p1 ; Align 1363339 1 1563 utg731_pilon exonerate:protein2genome:local gene 81908 82093 211 + . gene_id 0 ; sequence GL50803_121517-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 81908 82093 . + . utg731_pilon exonerate:protein2genome:local exon 81908 82093 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 81908 82093 211 + . alignment_id 0 ; Query GL50803_121517-t26_1-p1 ; Align 81908 2 186 utg731_pilon exonerate:protein2genome:local gene 1359485 1360486 1073 + . gene_id 0 ; sequence GL50803_12152-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1359485 1360486 . + . utg731_pilon exonerate:protein2genome:local exon 1359485 1360486 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1359485 1360486 1073 + . alignment_id 0 ; Query GL50803_12152-t26_1-p1 ; Align 1359485 1 1002 utg731_pilon exonerate:protein2genome:local gene 51323 51871 825 - . gene_id 0 ; sequence GL50803_12157-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 51323 51871 . - . utg731_pilon exonerate:protein2genome:local exon 51323 51871 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 51323 51871 825 - . alignment_id 0 ; Query GL50803_12157-t26_1-p1 ; Align 51872 1 351 ; Align 51521 120 198 utg731_pilon exonerate:protein2genome:local gene 52123 52425 314 - . gene_id 0 ; sequence GL50803_12158-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 52123 52425 . - . utg731_pilon exonerate:protein2genome:local exon 52123 52425 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 52123 52425 314 - . alignment_id 0 ; Query GL50803_12158-t26_1-p1 ; Align 52426 3 303 utg731_pilon exonerate:protein2genome:local gene 52450 52932 726 + . gene_id 0 ; sequence GL50803_12160-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 52450 52932 . + . utg731_pilon exonerate:protein2genome:local exon 52450 52932 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 52450 52932 726 + . alignment_id 0 ; Query GL50803_12160-t26_1-p1 ; Align 52450 1 483 utg731_pilon exonerate:protein2genome:local gene 52991 53617 676 + . gene_id 0 ; sequence GL50803_12161-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 52991 53617 . + . utg731_pilon exonerate:protein2genome:local exon 52991 53617 . + . insertions 0 ; deletions 6 utg731_pilon exonerate:protein2genome:local similarity 52991 53617 676 + . alignment_id 0 ; Query GL50803_12161-t26_1-p1 ; Align 52991 1 405 ; Align 53396 138 90 ; Align 53486 172 132 utg731_pilon exonerate:protein2genome:local gene 53644 55266 2414 + . gene_id 0 ; sequence GL50803_12162-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 53644 55266 . + . utg731_pilon exonerate:protein2genome:local exon 53644 55266 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 53644 55266 2414 + . alignment_id 0 ; Query GL50803_12162-t26_1-p1 ; Align 53644 1 1623 utg731_pilon exonerate:protein2genome:local gene 55336 56553 1999 - . gene_id 0 ; sequence GL50803_12163-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 55336 56553 . - . utg731_pilon exonerate:protein2genome:local exon 55336 56553 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 55336 56553 1999 - . alignment_id 0 ; Query GL50803_12163-t26_1-p1 ; Align 56554 1 1218 utg731_pilon exonerate:protein2genome:local gene 56575 56844 387 - . gene_id 0 ; sequence GL50803_12164-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 56575 56844 . - . utg731_pilon exonerate:protein2genome:local exon 56575 56844 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 56575 56844 387 - . alignment_id 0 ; Query GL50803_12164-t26_1-p1 ; Align 56845 1 270 utg731_pilon exonerate:protein2genome:local gene 56569 57017 441 + . gene_id 0 ; sequence GL50803_12165-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 56569 57017 . + . utg731_pilon exonerate:protein2genome:local exon 56569 57017 . + . insertions 0 ; deletions 0 ; frameshifts 5 utg731_pilon exonerate:protein2genome:local similarity 56569 57017 441 + . alignment_id 0 ; Query GL50803_12165-t26_1-p1 ; Align 56569 14 351 ; Align 56925 131 93 utg731_pilon exonerate:protein2genome:local gene 82448 83569 1492 - . gene_id 0 ; sequence GL50803_12174-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 82448 83569 . - . utg731_pilon exonerate:protein2genome:local exon 82448 83569 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 82448 83569 1492 - . alignment_id 0 ; Query GL50803_12174-t26_1-p1 ; Align 83570 8 1122 utg308_pilon exonerate:protein2genome:local gene 475914 478545 2756 + . gene_id 0 ; sequence GL50803_12207-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 475914 476841 . + . utg308_pilon exonerate:protein2genome:local exon 475914 476841 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 476842 476843 . + . intron_id 1 ; splice_site "GC" utg308_pilon exonerate:protein2genome:local intron 476842 476875 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 476874 476875 . + . intron_id 0 ; splice_site "AC" utg308_pilon exonerate:protein2genome:local cds 476876 478545 . + . utg308_pilon exonerate:protein2genome:local exon 476876 478545 . + . insertions 0 ; deletions 6 utg308_pilon exonerate:protein2genome:local similarity 475914 478545 2756 + . alignment_id 0 ; Query GL50803_12207-t26_1-p1 ; Align 475914 1 927 ; Align 476878 311 480 ; Align 477358 475 135 ; Align 477493 522 1053 utg308_pilon exonerate:protein2genome:local gene 485582 487990 2319 + . gene_id 0 ; sequence GL50803_12213-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 485582 486410 . + . utg308_pilon exonerate:protein2genome:local exon 485582 486410 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 486411 486412 . + . intron_id 1 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 486411 486449 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 486448 486449 . + . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 486450 487990 . + . utg308_pilon exonerate:protein2genome:local exon 486450 487990 . + . insertions 0 ; deletions 5 utg308_pilon exonerate:protein2genome:local similarity 485582 487990 2319 + . alignment_id 0 ; Query GL50803_12213-t26_1-p1 ; Align 485582 1 828 ; Align 486452 278 15 ; Align 486467 284 333 ; Align 486800 399 1191 utg308_pilon exonerate:protein2genome:local gene 488539 489330 1148 + . gene_id 0 ; sequence GL50803_12215-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 488539 489330 . + . utg308_pilon exonerate:protein2genome:local exon 488539 489330 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 488539 489330 1148 + . alignment_id 0 ; Query GL50803_12215-t26_1-p1 ; Align 488539 1 792 utg308_pilon exonerate:protein2genome:local gene 489329 490819 2445 - . gene_id 0 ; sequence GL50803_12216-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 489329 490819 . - . utg308_pilon exonerate:protein2genome:local exon 489329 490819 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 489329 490819 2445 - . alignment_id 0 ; Query GL50803_12216-t26_1-p1 ; Align 490820 1 1491 utg308_pilon exonerate:protein2genome:local gene 490934 497413 8527 - . gene_id 0 ; sequence GL50803_12217-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 490934 497413 . - . utg308_pilon exonerate:protein2genome:local exon 490934 497413 . - . insertions 9 ; deletions 8 utg308_pilon exonerate:protein2genome:local similarity 490934 497413 8527 - . alignment_id 0 ; Query GL50803_12217-t26_1-p1 ; Align 497414 1 600 ; Align 496811 201 801 ; Align 496010 470 321 ; Align 495689 579 45 ; Align 495644 597 81 ; Align 495557 624 2763 ; Align 492794 1546 1860 utg308_pilon exonerate:protein2genome:local gene 497571 499235 2644 - . gene_id 0 ; sequence GL50803_12218-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 497571 499235 . - . utg308_pilon exonerate:protein2genome:local exon 497571 499235 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 497571 499235 2644 - . alignment_id 0 ; Query GL50803_12218-t26_1-p1 ; Align 499236 1 1665 utg308_pilon exonerate:protein2genome:local gene 499959 500624 973 + . gene_id 0 ; sequence GL50803_12220-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 499959 500624 . + . utg308_pilon exonerate:protein2genome:local exon 499959 500624 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 499959 500624 973 + . alignment_id 0 ; Query GL50803_12220-t26_1-p1 ; Align 499959 7 666 utg308_pilon exonerate:protein2genome:local gene 500642 502596 2650 - . gene_id 0 ; sequence GL50803_12223-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 500642 502596 . - . utg308_pilon exonerate:protein2genome:local exon 500642 502596 . - . insertions 33 ; deletions 2 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 500642 502596 2650 - . alignment_id 0 ; Query GL50803_12223-t26_1-p1 ; Align 502597 1 1059 ; Align 501536 354 369 ; Align 501167 479 114 ; Align 501047 517 21 ; Align 501020 524 48 ; Align 500960 540 81 ; Align 500870 567 228 utg308_pilon exonerate:protein2genome:local gene 371553 503525 1407 + . gene_id 0 ; sequence GL50803_12224-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 371553 371579 . + . utg308_pilon exonerate:protein2genome:local exon 371553 371579 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 371580 371581 . + . intron_id 1 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 371580 502652 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 502651 502652 . + . intron_id 0 ; splice_site "AA" utg308_pilon exonerate:protein2genome:local cds 502653 503525 . + . utg308_pilon exonerate:protein2genome:local exon 502653 503525 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 371553 503525 1407 + . alignment_id 0 ; Query GL50803_12224-t26_1-p1 ; Align 371553 1 27 ; Align 502653 10 873 utg308_pilon exonerate:protein2genome:local gene 503605 504816 1711 + . gene_id 0 ; sequence GL50803_12225-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 503605 504816 . + . utg308_pilon exonerate:protein2genome:local exon 503605 504816 . + . insertions 0 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 503605 504816 1711 + . alignment_id 0 ; Query GL50803_12225-t26_1-p1 ; Align 503605 45 660 ; Align 504265 268 552 utg308_pilon exonerate:protein2genome:local gene 506288 507133 715 + . gene_id 0 ; sequence GL50803_12229-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 506288 506585 . + . utg308_pilon exonerate:protein2genome:local exon 506288 506585 . + . insertions 0 ; deletions 4 utg308_pilon exonerate:protein2genome:local splice5 506586 506587 . + . intron_id 1 ; splice_site "AT" utg308_pilon exonerate:protein2genome:local intron 506586 506615 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 506614 506615 . + . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 506616 507133 . + . utg308_pilon exonerate:protein2genome:local exon 506616 507133 . + . insertions 3 ; deletions 4 utg308_pilon exonerate:protein2genome:local similarity 506288 507133 715 + . alignment_id 0 ; Query GL50803_12229-t26_1-p1 ; Align 506288 1 243 ; Align 506531 86 54 ; Align 506618 107 60 ; Align 506678 129 96 ; Align 506777 161 357 utg308_pilon exonerate:protein2genome:local gene 507270 507794 729 + . gene_id 0 ; sequence GL50803_12230-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 507270 507794 . + . utg308_pilon exonerate:protein2genome:local exon 507270 507794 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 507270 507794 729 + . alignment_id 0 ; Query GL50803_12230-t26_1-p1 ; Align 507270 1 525 utg308_pilon exonerate:protein2genome:local gene 508019 510826 3081 - . gene_id 0 ; sequence GL50803_12231-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 508019 510826 . - . utg308_pilon exonerate:protein2genome:local exon 508019 510826 . - . insertions 12 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 508019 510826 3081 - . alignment_id 0 ; Query GL50803_12231-t26_1-p1 ; Align 510827 8 927 ; Align 509897 317 27 ; Align 509870 327 1737 ; Align 508127 906 15 ; Align 508109 911 90 utg308_pilon exonerate:protein2genome:local gene 512106 513690 2321 + . gene_id 0 ; sequence GL50803_12235-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 512106 513690 . + . utg308_pilon exonerate:protein2genome:local exon 512106 513690 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 512106 513690 2321 + . alignment_id 0 ; Query GL50803_12235-t26_1-p1 ; Align 512106 5 1206 ; Align 513313 407 378 utg308_pilon exonerate:protein2genome:local gene 515998 516165 200 - . gene_id 0 ; sequence GL50803_12238-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 515998 516165 . - . utg308_pilon exonerate:protein2genome:local exon 515998 516165 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 515998 516165 200 - . alignment_id 0 ; Query GL50803_12238-t26_1-p1 ; Align 516166 4 168 utg308_pilon exonerate:protein2genome:local gene 516169 517659 1717 - . gene_id 0 ; sequence GL50803_12240-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 516169 517659 . - . utg308_pilon exonerate:protein2genome:local exon 516169 517659 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 516169 517659 1717 - . alignment_id 0 ; Query GL50803_12240-t26_1-p1 ; Align 517660 1 1491 utg308_pilon exonerate:protein2genome:local gene 524490 524843 311 + . gene_id 0 ; sequence GL50803_12244-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 524490 524843 . + . utg308_pilon exonerate:protein2genome:local exon 524490 524843 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 524490 524843 311 + . alignment_id 0 ; Query GL50803_12244-t26_1-p1 ; Align 524490 4 354 utg64_pilon exonerate:protein2genome:local gene 586958 646971 344 - . gene_id 0 ; sequence GL50803_122564-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 646826 646971 . - . utg64_pilon exonerate:protein2genome:local exon 646826 646971 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 646824 646825 . - . intron_id 1 ; splice_site "TG" utg64_pilon exonerate:protein2genome:local intron 587076 646825 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 587076 587077 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 586958 587075 . - . utg64_pilon exonerate:protein2genome:local exon 586958 587075 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 586958 646971 344 - . alignment_id 0 ; Query GL50803_122564-t26_1-p1 ; Align 646972 2 99 ; Align 646873 36 45 ; Align 587075 52 117 utg64_pilon exonerate:protein2genome:local gene 586958 646971 344 - . gene_id 0 ; sequence GL50803_122565-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 646826 646971 . - . utg64_pilon exonerate:protein2genome:local exon 646826 646971 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 646824 646825 . - . intron_id 1 ; splice_site "TG" utg64_pilon exonerate:protein2genome:local intron 587076 646825 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 587076 587077 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 586958 587075 . - . utg64_pilon exonerate:protein2genome:local exon 586958 587075 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 586958 646971 344 - . alignment_id 0 ; Query GL50803_122565-t26_1-p1 ; Align 646972 2 99 ; Align 646873 36 45 ; Align 587075 52 117 utg64_pilon exonerate:protein2genome:local gene 586958 646971 344 - . gene_id 0 ; sequence GL50803_122566-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 646826 646971 . - . utg64_pilon exonerate:protein2genome:local exon 646826 646971 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 646824 646825 . - . intron_id 1 ; splice_site "TG" utg64_pilon exonerate:protein2genome:local intron 587076 646825 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 587076 587077 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 586958 587075 . - . utg64_pilon exonerate:protein2genome:local exon 586958 587075 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 586958 646971 344 - . alignment_id 0 ; Query GL50803_122566-t26_1-p1 ; Align 646972 2 99 ; Align 646873 36 45 ; Align 587075 52 117 utg265_pilon exonerate:protein2genome:local gene 669510 669826 158 + . gene_id 0 ; sequence GL50803_123305-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 669510 669826 . + . utg265_pilon exonerate:protein2genome:local exon 669510 669826 . + . insertions 0 ; deletions 4 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 669510 669826 158 + . alignment_id 0 ; Query GL50803_123305-t26_1-p1 ; Align 669510 1 51 ; Align 669563 18 168 ; Align 669731 78 96 utg212_pilon exonerate:protein2genome:local gene 341224 341322 119 + . gene_id 0 ; sequence GL50803_123336-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 341224 341322 . + . utg212_pilon exonerate:protein2genome:local exon 341224 341322 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 341224 341322 119 + . alignment_id 0 ; Query GL50803_123336-t26_1-p1 ; Align 341224 2 99 utg11_pilon exonerate:protein2genome:local gene 649657 649803 120 + . gene_id 0 ; sequence GL50803_123810-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 649657 649803 . + . utg11_pilon exonerate:protein2genome:local exon 649657 649803 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 649657 649803 120 + . alignment_id 0 ; Query GL50803_123810-t26_1-p1 ; Align 649657 10 147 utg212_pilon exonerate:protein2genome:local gene 405095 405241 120 - . gene_id 0 ; sequence GL50803_123810-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 405095 405241 . - . utg212_pilon exonerate:protein2genome:local exon 405095 405241 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 405095 405241 120 - . alignment_id 0 ; Query GL50803_123810-t26_1-p1 ; Align 405242 10 147 utg11_pilon exonerate:protein2genome:local gene 649657 649803 120 + . gene_id 0 ; sequence GL50803_123811-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 649657 649803 . + . utg11_pilon exonerate:protein2genome:local exon 649657 649803 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 649657 649803 120 + . alignment_id 0 ; Query GL50803_123811-t26_1-p1 ; Align 649657 10 147 utg212_pilon exonerate:protein2genome:local gene 405095 405241 120 - . gene_id 0 ; sequence GL50803_123811-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 405095 405241 . - . utg212_pilon exonerate:protein2genome:local exon 405095 405241 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 405095 405241 120 - . alignment_id 0 ; Query GL50803_123811-t26_1-p1 ; Align 405242 10 147 utg11_pilon exonerate:protein2genome:local gene 110065 110166 115 - . gene_id 0 ; sequence GL50803_124110-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 110065 110166 . - . utg11_pilon exonerate:protein2genome:local exon 110065 110166 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 110065 110166 115 - . alignment_id 0 ; Query GL50803_124110-t26_1-p1 ; Align 110167 1 102 utg8808_pilon exonerate:protein2genome:local gene 34931 35032 115 - . gene_id 0 ; sequence GL50803_124110-t26_1-p1 ; gene_orientation . utg8808_pilon exonerate:protein2genome:local cds 34931 35032 . - . utg8808_pilon exonerate:protein2genome:local exon 34931 35032 . - . insertions 0 ; deletions 0 utg8808_pilon exonerate:protein2genome:local similarity 34931 35032 115 - . alignment_id 0 ; Query GL50803_124110-t26_1-p1 ; Align 35033 1 102 utg8808_pilon exonerate:protein2genome:local gene 30500 30601 115 - . gene_id 0 ; sequence GL50803_124110-t26_1-p1 ; gene_orientation . utg8808_pilon exonerate:protein2genome:local cds 30500 30601 . - . utg8808_pilon exonerate:protein2genome:local exon 30500 30601 . - . insertions 0 ; deletions 0 utg8808_pilon exonerate:protein2genome:local similarity 30500 30601 115 - . alignment_id 0 ; Query GL50803_124110-t26_1-p1 ; Align 30602 1 102 utg11_pilon exonerate:protein2genome:local gene 110065 110166 115 - . gene_id 0 ; sequence GL50803_124111-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 110065 110166 . - . utg11_pilon exonerate:protein2genome:local exon 110065 110166 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 110065 110166 115 - . alignment_id 0 ; Query GL50803_124111-t26_1-p1 ; Align 110167 1 102 utg8808_pilon exonerate:protein2genome:local gene 34931 35032 115 - . gene_id 0 ; sequence GL50803_124111-t26_1-p1 ; gene_orientation . utg8808_pilon exonerate:protein2genome:local cds 34931 35032 . - . utg8808_pilon exonerate:protein2genome:local exon 34931 35032 . - . insertions 0 ; deletions 0 utg8808_pilon exonerate:protein2genome:local similarity 34931 35032 115 - . alignment_id 0 ; Query GL50803_124111-t26_1-p1 ; Align 35033 1 102 utg8808_pilon exonerate:protein2genome:local gene 30500 30601 115 - . gene_id 0 ; sequence GL50803_124111-t26_1-p1 ; gene_orientation . utg8808_pilon exonerate:protein2genome:local cds 30500 30601 . - . utg8808_pilon exonerate:protein2genome:local exon 30500 30601 . - . insertions 0 ; deletions 0 utg8808_pilon exonerate:protein2genome:local similarity 30500 30601 115 - . alignment_id 0 ; Query GL50803_124111-t26_1-p1 ; Align 30602 1 102 utg212_pilon exonerate:protein2genome:local gene 404965 405183 242 - . gene_id 0 ; sequence GL50803_124727-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 404965 405183 . - . utg212_pilon exonerate:protein2genome:local exon 404965 405183 . - . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 404965 405183 242 - . alignment_id 0 ; Query GL50803_124727-t26_1-p1 ; Align 405184 1 186 ; Align 404995 63 30 utg308_pilon exonerate:protein2genome:local gene 825414 825632 242 - . gene_id 0 ; sequence GL50803_124727-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 825414 825632 . - . utg308_pilon exonerate:protein2genome:local exon 825414 825632 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 825414 825632 242 - . alignment_id 0 ; Query GL50803_124727-t26_1-p1 ; Align 825633 1 186 ; Align 825444 63 30 utg349_pilon exonerate:protein2genome:local gene 1439900 1440118 242 + . gene_id 0 ; sequence GL50803_124727-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1439900 1440118 . + . utg349_pilon exonerate:protein2genome:local exon 1439900 1440118 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1439900 1440118 242 + . alignment_id 0 ; Query GL50803_124727-t26_1-p1 ; Align 1439900 1 186 ; Align 1440089 63 30 utg731_pilon exonerate:protein2genome:local gene 68263 68481 242 - . gene_id 0 ; sequence GL50803_124727-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 68263 68481 . - . utg731_pilon exonerate:protein2genome:local exon 68263 68481 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 68263 68481 242 - . alignment_id 0 ; Query GL50803_124727-t26_1-p1 ; Align 68482 1 186 ; Align 68293 63 30 utg212_pilon exonerate:protein2genome:local gene 404965 405183 242 - . gene_id 0 ; sequence GL50803_124728-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 404965 405183 . - . utg212_pilon exonerate:protein2genome:local exon 404965 405183 . - . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 404965 405183 242 - . alignment_id 0 ; Query GL50803_124728-t26_1-p1 ; Align 405184 1 186 ; Align 404995 63 30 utg308_pilon exonerate:protein2genome:local gene 825414 825632 242 - . gene_id 0 ; sequence GL50803_124728-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 825414 825632 . - . utg308_pilon exonerate:protein2genome:local exon 825414 825632 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 825414 825632 242 - . alignment_id 0 ; Query GL50803_124728-t26_1-p1 ; Align 825633 1 186 ; Align 825444 63 30 utg349_pilon exonerate:protein2genome:local gene 1439900 1440118 242 + . gene_id 0 ; sequence GL50803_124728-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1439900 1440118 . + . utg349_pilon exonerate:protein2genome:local exon 1439900 1440118 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1439900 1440118 242 + . alignment_id 0 ; Query GL50803_124728-t26_1-p1 ; Align 1439900 1 186 ; Align 1440089 63 30 utg731_pilon exonerate:protein2genome:local gene 68263 68481 242 - . gene_id 0 ; sequence GL50803_124728-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 68263 68481 . - . utg731_pilon exonerate:protein2genome:local exon 68263 68481 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 68263 68481 242 - . alignment_id 0 ; Query GL50803_124728-t26_1-p1 ; Align 68482 1 186 ; Align 68293 63 30 utg265_pilon exonerate:protein2genome:local gene 556508 694481 366 + . gene_id 0 ; sequence GL50803_124980-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 556508 556627 . + . utg265_pilon exonerate:protein2genome:local exon 556508 556627 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 556628 556629 . + . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 556628 694307 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 694306 694307 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 694308 694481 . + . utg265_pilon exonerate:protein2genome:local exon 694308 694481 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 556508 694481 366 + . alignment_id 0 ; Query GL50803_124980-t26_1-p1 ; Align 556508 1 120 ; Align 694308 41 174 utg731_pilon exonerate:protein2genome:local gene 1634300 1634623 141 + . gene_id 0 ; sequence GL50803_125103-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1634300 1634623 . + . utg731_pilon exonerate:protein2genome:local exon 1634300 1634623 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1634300 1634623 141 + . alignment_id 0 ; Query GL50803_125103-t26_1-p1 ; Align 1634300 38 324 utg731_pilon exonerate:protein2genome:local gene 1634300 1634623 141 + . gene_id 0 ; sequence GL50803_125104-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1634300 1634623 . + . utg731_pilon exonerate:protein2genome:local exon 1634300 1634623 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1634300 1634623 141 + . alignment_id 0 ; Query GL50803_125104-t26_1-p1 ; Align 1634300 38 324 utg731_pilon exonerate:protein2genome:local gene 1634300 1634623 141 + . gene_id 0 ; sequence GL50803_125105-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1634300 1634623 . + . utg731_pilon exonerate:protein2genome:local exon 1634300 1634623 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1634300 1634623 141 + . alignment_id 0 ; Query GL50803_125105-t26_1-p1 ; Align 1634300 38 324 utg731_pilon exonerate:protein2genome:local gene 1634300 1634623 141 + . gene_id 0 ; sequence GL50803_125106-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1634300 1634623 . + . utg731_pilon exonerate:protein2genome:local exon 1634300 1634623 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1634300 1634623 141 + . alignment_id 0 ; Query GL50803_125106-t26_1-p1 ; Align 1634300 38 324 utg212_pilon exonerate:protein2genome:local gene 117283 117387 166 + . gene_id 0 ; sequence GL50803_125410-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 117283 117387 . + . utg212_pilon exonerate:protein2genome:local exon 117283 117387 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 117283 117387 166 + . alignment_id 0 ; Query GL50803_125410-t26_1-p1 ; Align 117283 1 105 utg212_pilon exonerate:protein2genome:local gene 115760 115864 166 - . gene_id 0 ; sequence GL50803_125410-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 115760 115864 . - . utg212_pilon exonerate:protein2genome:local exon 115760 115864 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 115760 115864 166 - . alignment_id 0 ; Query GL50803_125410-t26_1-p1 ; Align 115865 1 105 utg212_pilon exonerate:protein2genome:local gene 117283 117387 166 + . gene_id 0 ; sequence GL50803_125411-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 117283 117387 . + . utg212_pilon exonerate:protein2genome:local exon 117283 117387 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 117283 117387 166 + . alignment_id 0 ; Query GL50803_125411-t26_1-p1 ; Align 117283 1 105 utg212_pilon exonerate:protein2genome:local gene 115760 115864 166 - . gene_id 0 ; sequence GL50803_125411-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 115760 115864 . - . utg212_pilon exonerate:protein2genome:local exon 115760 115864 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 115760 115864 166 - . alignment_id 0 ; Query GL50803_125411-t26_1-p1 ; Align 115865 1 105 utg349_pilon exonerate:protein2genome:local gene 966883 967047 189 + . gene_id 0 ; sequence GL50803_12551-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 966883 967047 . + . utg349_pilon exonerate:protein2genome:local exon 966883 967047 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 966883 967047 189 + . alignment_id 0 ; Query GL50803_12551-t26_1-p1 ; Align 966883 17 165 utg349_pilon exonerate:protein2genome:local gene 962279 962443 189 - . gene_id 0 ; sequence GL50803_12551-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 962279 962443 . - . utg349_pilon exonerate:protein2genome:local exon 962279 962443 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 962279 962443 189 - . alignment_id 0 ; Query GL50803_12551-t26_1-p1 ; Align 962444 17 165 utg349_pilon exonerate:protein2genome:local gene 896836 897819 1618 - . gene_id 0 ; sequence GL50803_12598-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 896836 897819 . - . utg349_pilon exonerate:protein2genome:local exon 896836 897819 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 896836 897819 1618 - . alignment_id 0 ; Query GL50803_12598-t26_1-p1 ; Align 897820 1 984 utg212_pilon exonerate:protein2genome:local gene 319514 320000 696 - . gene_id 0 ; sequence GL50803_12657-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 319514 320000 . - . utg212_pilon exonerate:protein2genome:local exon 319514 320000 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 319514 320000 696 - . alignment_id 0 ; Query GL50803_12657-t26_1-p1 ; Align 320001 1 222 ; Align 319778 75 264 utg349_pilon exonerate:protein2genome:local gene 843482 843826 498 + . gene_id 0 ; sequence GL50803_1268-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 843482 843826 . + . utg349_pilon exonerate:protein2genome:local exon 843482 843826 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 843482 843826 498 + . alignment_id 0 ; Query GL50803_1268-t26_1-p1 ; Align 843482 1 345 utg99_pilon exonerate:protein2genome:local gene 260045 260236 144 + . gene_id 0 ; sequence GL50803_127012-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 260045 260236 . + . utg99_pilon exonerate:protein2genome:local exon 260045 260236 . + . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 260045 260236 144 + . alignment_id 0 ; Query GL50803_127012-t26_1-p1 ; Align 260045 3 42 ; Align 260090 17 147 utg99_pilon exonerate:protein2genome:local gene 260045 260236 144 + . gene_id 0 ; sequence GL50803_127013-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 260045 260236 . + . utg99_pilon exonerate:protein2genome:local exon 260045 260236 . + . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 260045 260236 144 + . alignment_id 0 ; Query GL50803_127013-t26_1-p1 ; Align 260045 3 42 ; Align 260090 17 147 utg99_pilon exonerate:protein2genome:local gene 260045 260236 144 + . gene_id 0 ; sequence GL50803_127014-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 260045 260236 . + . utg99_pilon exonerate:protein2genome:local exon 260045 260236 . + . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 260045 260236 144 + . alignment_id 0 ; Query GL50803_127014-t26_1-p1 ; Align 260045 3 42 ; Align 260090 17 147 utg265_pilon exonerate:protein2genome:local gene 832242 832646 575 + . gene_id 0 ; sequence GL50803_12741-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 832242 832646 . + . utg265_pilon exonerate:protein2genome:local exon 832242 832646 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 832242 832646 575 + . alignment_id 0 ; Query GL50803_12741-t26_1-p1 ; Align 832242 1 405 utg212_pilon exonerate:protein2genome:local gene 438964 439668 1107 + . gene_id 0 ; sequence GL50803_12770-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 438964 439668 . + . utg212_pilon exonerate:protein2genome:local exon 438964 439668 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 438964 439668 1107 + . alignment_id 0 ; Query GL50803_12770-t26_1-p1 ; Align 438964 1 705 utg731_pilon exonerate:protein2genome:local gene 343475 343747 192 + . gene_id 0 ; sequence GL50803_127805-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 343475 343747 . + . utg731_pilon exonerate:protein2genome:local exon 343475 343747 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 343475 343747 192 + . alignment_id 0 ; Query GL50803_127805-t26_1-p1 ; Align 343475 2 273 utg731_pilon exonerate:protein2genome:local gene 343475 343747 192 + . gene_id 0 ; sequence GL50803_127806-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 343475 343747 . + . utg731_pilon exonerate:protein2genome:local exon 343475 343747 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 343475 343747 192 + . alignment_id 0 ; Query GL50803_127806-t26_1-p1 ; Align 343475 2 273 utg47_pilon exonerate:protein2genome:local gene 610767 611477 960 - . gene_id 0 ; sequence GL50803_12795-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 610767 611477 . - . utg47_pilon exonerate:protein2genome:local exon 610767 611477 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 610767 611477 960 - . alignment_id 0 ; Query GL50803_12795-t26_1-p1 ; Align 611478 1 711 utg212_pilon exonerate:protein2genome:local gene 44759 45907 1725 + . gene_id 0 ; sequence GL50803_12800-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 44759 45907 . + . utg212_pilon exonerate:protein2genome:local exon 44759 45907 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 44759 45907 1725 + . alignment_id 0 ; Query GL50803_12800-t26_1-p1 ; Align 44759 1 1149 utg99_pilon exonerate:protein2genome:local gene 386795 387346 870 - . gene_id 0 ; sequence GL50803_12807-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 386795 387346 . - . utg99_pilon exonerate:protein2genome:local exon 386795 387346 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 386795 387346 870 - . alignment_id 0 ; Query GL50803_12807-t26_1-p1 ; Align 387347 1 552 utg349_pilon exonerate:protein2genome:local gene 780960 781490 854 + . gene_id 0 ; sequence GL50803_12820-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 780960 781490 . + . utg349_pilon exonerate:protein2genome:local exon 780960 781490 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 780960 781490 854 + . alignment_id 0 ; Query GL50803_12820-t26_1-p1 ; Align 780960 9 531 utg47_pilon exonerate:protein2genome:local gene 2290368 2291587 1461 - . gene_id 0 ; sequence GL50803_12828-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2290368 2291587 . - . utg47_pilon exonerate:protein2genome:local exon 2290368 2291587 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 2290368 2291587 1461 - . alignment_id 0 ; Query GL50803_12828-t26_1-p1 ; Align 2291588 1 45 ; Align 2291541 17 1173 utg11_pilon exonerate:protein2genome:local gene 1413019 1413819 1178 + . gene_id 0 ; sequence GL50803_12830-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1413019 1413819 . + . utg11_pilon exonerate:protein2genome:local exon 1413019 1413819 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1413019 1413819 1178 + . alignment_id 0 ; Query GL50803_12830-t26_1-p1 ; Align 1413019 1 186 ; Align 1413205 65 615 utg308_pilon exonerate:protein2genome:local gene 960440 961261 1378 - . gene_id 0 ; sequence GL50803_12853-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 960440 961261 . - . utg308_pilon exonerate:protein2genome:local exon 960440 961261 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 960440 961261 1378 - . alignment_id 0 ; Query GL50803_12853-t26_1-p1 ; Align 961262 1 822 utg212_pilon exonerate:protein2genome:local gene 37439 38248 958 - . gene_id 0 ; sequence GL50803_12866-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 37439 38248 . - . utg212_pilon exonerate:protein2genome:local exon 37439 38248 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 37439 38248 958 - . alignment_id 0 ; Query GL50803_12866-t26_1-p1 ; Align 38249 1 810 utg212_pilon exonerate:protein2genome:local gene 38424 40013 2270 + . gene_id 0 ; sequence GL50803_12867-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 38424 40013 . + . utg212_pilon exonerate:protein2genome:local exon 38424 40013 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 38424 40013 2270 + . alignment_id 0 ; Query GL50803_12867-t26_1-p1 ; Align 38424 1 1590 utg64_pilon exonerate:protein2genome:local gene 468130 468528 320 + . gene_id 0 ; sequence GL50803_12875-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 468130 468528 . + . utg64_pilon exonerate:protein2genome:local exon 468130 468528 . + . insertions 3 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 468130 468528 320 + . alignment_id 0 ; Query GL50803_12875-t26_1-p1 ; Align 468130 2 9 ; Align 468139 6 78 ; Align 468220 32 309 utg308_pilon exonerate:protein2genome:local gene 957645 958847 1625 - . gene_id 0 ; sequence GL50803_12885-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 957645 958847 . - . utg308_pilon exonerate:protein2genome:local exon 957645 958847 . - . insertions 9 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 957645 958847 1625 - . alignment_id 0 ; Query GL50803_12885-t26_1-p1 ; Align 958848 1 903 ; Align 957942 302 30 ; Align 957906 312 261 utg212_pilon exonerate:protein2genome:local gene 153958 155124 1532 + . gene_id 0 ; sequence GL50803_12889-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 153958 155124 . + . utg212_pilon exonerate:protein2genome:local exon 153958 155124 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 153958 155124 1532 + . alignment_id 0 ; Query GL50803_12889-t26_1-p1 ; Align 153958 1 1167 utg47_pilon exonerate:protein2genome:local gene 136305 136610 315 + . gene_id 0 ; sequence GL50803_12899-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 136305 136610 . + . utg47_pilon exonerate:protein2genome:local exon 136305 136610 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 136305 136610 315 + . alignment_id 0 ; Query GL50803_12899-t26_1-p1 ; Align 136305 1 306 utg47_pilon exonerate:protein2genome:local gene 291495 292571 1170 + . gene_id 0 ; sequence GL50803_12905-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 291495 292571 . + . utg47_pilon exonerate:protein2genome:local exon 291495 292571 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 291495 292571 1170 + . alignment_id 0 ; Query GL50803_12905-t26_1-p1 ; Align 291495 1 1077 utg11_pilon exonerate:protein2genome:local gene 1070842 1071483 910 + . gene_id 0 ; sequence GL50803_12920-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1070842 1071483 . + . utg11_pilon exonerate:protein2genome:local exon 1070842 1071483 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1070842 1071483 910 + . alignment_id 0 ; Query GL50803_12920-t26_1-p1 ; Align 1070842 1 642 utg349_pilon exonerate:protein2genome:local gene 430338 430772 578 - . gene_id 0 ; sequence GL50803_12921-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 430338 430772 . - . utg349_pilon exonerate:protein2genome:local exon 430338 430772 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 430338 430772 578 - . alignment_id 0 ; Query GL50803_12921-t26_1-p1 ; Align 430773 3 435 utg47_pilon exonerate:protein2genome:local gene 1758732 1759535 1142 - . gene_id 0 ; sequence GL50803_12941-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1758732 1759535 . - . utg47_pilon exonerate:protein2genome:local exon 1758732 1759535 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1758732 1759535 1142 - . alignment_id 0 ; Query GL50803_12941-t26_1-p1 ; Align 1759536 1 804 utg47_pilon exonerate:protein2genome:local gene 1757748 1758182 688 - . gene_id 0 ; sequence GL50803_12942-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1757748 1758182 . - . utg47_pilon exonerate:protein2genome:local exon 1757748 1758182 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1757748 1758182 688 - . alignment_id 0 ; Query GL50803_12942-t26_1-p1 ; Align 1758183 1 435 utg99_pilon exonerate:protein2genome:local gene 36043 36939 1354 - . gene_id 0 ; sequence GL50803_12945-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 36043 36939 . - . utg99_pilon exonerate:protein2genome:local exon 36043 36939 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 36043 36939 1354 - . alignment_id 0 ; Query GL50803_12945-t26_1-p1 ; Align 36940 1 897 utg47_pilon exonerate:protein2genome:local gene 455036 455918 1418 + . gene_id 0 ; sequence GL50803_12949-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 455036 455918 . + . utg47_pilon exonerate:protein2genome:local exon 455036 455918 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 455036 455918 1418 + . alignment_id 0 ; Query GL50803_12949-t26_1-p1 ; Align 455036 1 348 ; Align 455385 117 534 utg47_pilon exonerate:protein2genome:local gene 457900 458453 851 - . gene_id 0 ; sequence GL50803_12950-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 457900 458453 . - . utg47_pilon exonerate:protein2genome:local exon 457900 458453 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 457900 458453 851 - . alignment_id 0 ; Query GL50803_12950-t26_1-p1 ; Align 458454 1 165 ; Align 458287 57 387 utg731_pilon exonerate:protein2genome:local gene 1572262 1572873 933 - . gene_id 0 ; sequence GL50803_12953-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1572262 1572873 . - . utg731_pilon exonerate:protein2genome:local exon 1572262 1572873 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1572262 1572873 933 - . alignment_id 0 ; Query GL50803_12953-t26_1-p1 ; Align 1572874 9 612 utg47_pilon exonerate:protein2genome:local gene 2296836 2297405 962 - . gene_id 0 ; sequence GL50803_12981-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2296836 2297405 . - . utg47_pilon exonerate:protein2genome:local exon 2296836 2297405 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2296836 2297405 962 - . alignment_id 0 ; Query GL50803_12981-t26_1-p1 ; Align 2297406 1 570 utg731_pilon exonerate:protein2genome:local gene 203983 205623 1952 + . gene_id 0 ; sequence GL50803_12989-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 203983 205623 . + . utg731_pilon exonerate:protein2genome:local exon 203983 205623 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 203983 205623 1952 + . alignment_id 0 ; Query GL50803_12989-t26_1-p1 ; Align 203983 7 1248 ; Align 205234 423 390 utg47_pilon exonerate:protein2genome:local gene 868998 869279 357 + . gene_id 0 ; sequence GL50803_12993-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 868998 869279 . + . utg47_pilon exonerate:protein2genome:local exon 868998 869279 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 868998 869279 357 + . alignment_id 0 ; Query GL50803_12993-t26_1-p1 ; Align 868998 3 282 utg349_pilon exonerate:protein2genome:local gene 709466 710056 685 + . gene_id 0 ; sequence GL50803_12999-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 709466 710056 . + . utg349_pilon exonerate:protein2genome:local exon 709466 710056 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 709466 710056 685 + . alignment_id 0 ; Query GL50803_12999-t26_1-p1 ; Align 709466 28 591 utg47_pilon exonerate:protein2genome:local gene 1064533 1065330 1060 - . gene_id 0 ; sequence GL50803_1300-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1064533 1065330 . - . utg47_pilon exonerate:protein2genome:local exon 1064533 1065330 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1064533 1065330 1060 - . alignment_id 0 ; Query GL50803_1300-t26_1-p1 ; Align 1065331 1 408 ; Align 1064923 138 390 utg349_pilon exonerate:protein2genome:local gene 710724 711776 1653 - . gene_id 0 ; sequence GL50803_13000-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 710724 711776 . - . utg349_pilon exonerate:protein2genome:local exon 710724 711776 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 710724 711776 1653 - . alignment_id 0 ; Query GL50803_13000-t26_1-p1 ; Align 711777 1 1053 utg308_pilon exonerate:protein2genome:local gene 527551 528951 2263 + . gene_id 0 ; sequence GL50803_13007-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 527551 528951 . + . utg308_pilon exonerate:protein2genome:local exon 527551 528951 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 527551 528951 2263 + . alignment_id 0 ; Query GL50803_13007-t26_1-p1 ; Align 527551 1 1401 utg11_pilon exonerate:protein2genome:local gene 985930 987039 1733 - . gene_id 0 ; sequence GL50803_13055-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 985930 987039 . - . utg11_pilon exonerate:protein2genome:local exon 985930 987039 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 985930 987039 1733 - . alignment_id 0 ; Query GL50803_13055-t26_1-p1 ; Align 987040 1 1110 utg11_pilon exonerate:protein2genome:local gene 1031901 1032560 583 + . gene_id 0 ; sequence GL50803_13056-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1031901 1032560 . + . utg11_pilon exonerate:protein2genome:local exon 1031901 1032560 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1031901 1032560 583 + . alignment_id 0 ; Query GL50803_13056-t26_1-p1 ; Align 1031901 1 399 ; Align 1032300 135 261 utg265_pilon exonerate:protein2genome:local gene 65411 66859 2069 + . gene_id 0 ; sequence GL50803_13075-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 65411 66859 . + . utg265_pilon exonerate:protein2genome:local exon 65411 66859 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 65411 66859 2069 + . alignment_id 0 ; Query GL50803_13075-t26_1-p1 ; Align 65411 1 1449 utg1966_pilon exonerate:protein2genome:local gene 82407 83372 677 - . gene_id 0 ; sequence GL50803_13091-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 82407 83372 . - . utg1966_pilon exonerate:protein2genome:local exon 82407 83372 . - . insertions 15 ; deletions 4 utg1966_pilon exonerate:protein2genome:local similarity 82407 83372 677 - . alignment_id 0 ; Query GL50803_13091-t26_1-p1 ; Align 83373 1 153 ; Align 83217 52 171 ; Align 83046 110 441 ; Align 82593 257 99 ; Align 82494 291 9 ; Align 82485 296 78 utg47_pilon exonerate:protein2genome:local gene 1076504 1077310 1121 + . gene_id 0 ; sequence GL50803_13101-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1076504 1077310 . + . utg47_pilon exonerate:protein2genome:local exon 1076504 1077310 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1076504 1077310 1121 + . alignment_id 0 ; Query GL50803_13101-t26_1-p1 ; Align 1076504 1 807 utg47_pilon exonerate:protein2genome:local gene 1075770 1076447 1054 - . gene_id 0 ; sequence GL50803_13103-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1075770 1076447 . - . utg47_pilon exonerate:protein2genome:local exon 1075770 1076447 . - . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 1075770 1076447 1054 - . alignment_id 0 ; Query GL50803_13103-t26_1-p1 ; Align 1076448 59 531 ; Align 1075917 240 147 utg47_pilon exonerate:protein2genome:local gene 1074194 1075312 1761 - . gene_id 0 ; sequence GL50803_13104-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1074194 1075312 . - . utg47_pilon exonerate:protein2genome:local exon 1074194 1075312 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1074194 1075312 1761 - . alignment_id 0 ; Query GL50803_13104-t26_1-p1 ; Align 1075313 17 1119 utg47_pilon exonerate:protein2genome:local gene 513058 513633 880 + . gene_id 0 ; sequence GL50803_13109-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 513058 513633 . + . utg47_pilon exonerate:protein2genome:local exon 513058 513633 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 513058 513633 880 + . alignment_id 0 ; Query GL50803_13109-t26_1-p1 ; Align 513058 1 576 utg47_pilon exonerate:protein2genome:local gene 1359486 1360251 1102 - . gene_id 0 ; sequence GL50803_13127-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1359486 1360251 . - . utg47_pilon exonerate:protein2genome:local exon 1359486 1360251 . - . insertions 0 ; deletions 0 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 1359486 1360251 1102 - . alignment_id 0 ; Query GL50803_13127-t26_1-p1 ; Align 1360252 1 102 ; Align 1360146 35 660 utg64_pilon exonerate:protein2genome:local gene 997002 998582 2242 - . gene_id 0 ; sequence GL50803_13133-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 997002 998582 . - . utg64_pilon exonerate:protein2genome:local exon 997002 998582 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 997002 998582 2242 - . alignment_id 0 ; Query GL50803_13133-t26_1-p1 ; Align 998583 1 1482 ; Align 997098 495 96 utg11_pilon exonerate:protein2genome:local gene 610096 610860 1118 + . gene_id 0 ; sequence GL50803_13143-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 610096 610860 . + . utg11_pilon exonerate:protein2genome:local exon 610096 610860 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 610096 610860 1118 + . alignment_id 0 ; Query GL50803_13143-t26_1-p1 ; Align 610096 1 765 utg99_pilon exonerate:protein2genome:local gene 367649 369376 2006 - . gene_id 0 ; sequence GL50803_13152-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 367649 369376 . - . utg99_pilon exonerate:protein2genome:local exon 367649 369376 . - . insertions 0 ; deletions 3 utg99_pilon exonerate:protein2genome:local similarity 367649 369376 2006 - . alignment_id 0 ; Query GL50803_13152-t26_1-p1 ; Align 369377 1 267 ; Align 369110 91 198 ; Align 368912 159 1263 utg47_pilon exonerate:protein2genome:local gene 75204 76484 1884 - . gene_id 0 ; sequence GL50803_13156-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 75204 76484 . - . utg47_pilon exonerate:protein2genome:local exon 75204 76484 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 75204 76484 1884 - . alignment_id 0 ; Query GL50803_13156-t26_1-p1 ; Align 76485 1 633 ; Align 75852 213 648 utg11_pilon exonerate:protein2genome:local gene 749328 749750 601 - . gene_id 0 ; sequence GL50803_13164-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 749328 749750 . - . utg11_pilon exonerate:protein2genome:local exon 749328 749750 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 749328 749750 601 - . alignment_id 0 ; Query GL50803_13164-t26_1-p1 ; Align 749751 1 423 utg349_pilon exonerate:protein2genome:local gene 167752 836633 1679 + . gene_id 0 ; sequence GL50803_13194-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 167752 167986 . + . utg349_pilon exonerate:protein2genome:local exon 167752 167986 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 167987 167988 . + . intron_id 1 ; splice_site "GA" utg349_pilon exonerate:protein2genome:local intron 167987 345178 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 345177 345178 . + . intron_id 0 ; splice_site "GA" utg349_pilon exonerate:protein2genome:local cds 345179 345197 . + . utg349_pilon exonerate:protein2genome:local exon 345179 345197 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 345198 345199 . + . intron_id 2 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 345198 497711 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 497710 497711 . + . intron_id 1 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 497712 498031 . + . utg349_pilon exonerate:protein2genome:local exon 497712 498031 . + . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local splice5 498032 498033 . + . intron_id 3 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 498032 551054 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 551053 551054 . + . intron_id 2 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local cds 551055 551431 . + . utg349_pilon exonerate:protein2genome:local exon 551055 551431 . + . insertions 21 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 551432 551433 . + . intron_id 4 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 551432 552738 . + . intron_id 4 utg349_pilon exonerate:protein2genome:local splice3 552737 552738 . + . intron_id 3 ; splice_site "CG" utg349_pilon exonerate:protein2genome:local cds 552739 553475 . + . utg349_pilon exonerate:protein2genome:local exon 552739 553475 . + . insertions 6 ; deletions 3 utg349_pilon exonerate:protein2genome:local splice5 553476 553477 . + . intron_id 5 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 553476 651358 . + . intron_id 5 utg349_pilon exonerate:protein2genome:local splice3 651357 651358 . + . intron_id 4 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 651359 651458 . + . utg349_pilon exonerate:protein2genome:local exon 651359 651458 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 651459 651460 . + . intron_id 6 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 651459 836570 . + . intron_id 6 utg349_pilon exonerate:protein2genome:local splice3 836569 836570 . + . intron_id 5 ; splice_site "CG" utg349_pilon exonerate:protein2genome:local cds 836571 836633 . + . utg349_pilon exonerate:protein2genome:local exon 836571 836633 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 167752 836633 1679 + . alignment_id 0 ; Query GL50803_13194-t26_1-p1 ; Align 167752 3 195 ; Align 167950 68 36 ; Align 345181 81 15 ; Align 497713 87 84 ; Align 497797 118 234 ; Align 551057 197 69 ; Align 551129 220 66 ; Align 551201 242 18 ; Align 551231 248 201 ; Align 552739 315 192 ; Align 552934 379 201 ; Align 553138 446 78 ; Align 553216 473 135 ; Align 553351 519 96 ; Align 553447 552 27 ; Align 651360 562 99 ; Align 836571 595 63 utg47_pilon exonerate:protein2genome:local gene 1334267 1336369 2955 - . gene_id 0 ; sequence GL50803_13196-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1334267 1336369 . - . utg47_pilon exonerate:protein2genome:local exon 1334267 1336369 . - . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1334267 1336369 2955 - . alignment_id 0 ; Query GL50803_13196-t26_1-p1 ; Align 1336370 1 1416 ; Align 1334951 473 120 ; Align 1334828 513 561 utg47_pilon exonerate:protein2genome:local gene 237189 239081 2204 - . gene_id 0 ; sequence GL50803_13200-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 237189 239081 . - . utg47_pilon exonerate:protein2genome:local exon 237189 239081 . - . insertions 3 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 237189 239081 2204 - . alignment_id 0 ; Query GL50803_13200-t26_1-p1 ; Align 239082 1 573 ; Align 238506 192 957 ; Align 237549 514 18 ; Align 237531 522 342 utg47_pilon exonerate:protein2genome:local gene 236173 237180 1631 + . gene_id 0 ; sequence GL50803_13201-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 236173 237180 . + . utg47_pilon exonerate:protein2genome:local exon 236173 237180 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 236173 237180 1631 + . alignment_id 0 ; Query GL50803_13201-t26_1-p1 ; Align 236173 1 1008 utg308_pilon exonerate:protein2genome:local gene 72218 73486 1644 - . gene_id 0 ; sequence GL50803_13204-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 72218 73486 . - . utg308_pilon exonerate:protein2genome:local exon 72218 73486 . - . insertions 15 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 72218 73486 1644 - . alignment_id 0 ; Query GL50803_13204-t26_1-p1 ; Align 73487 1 471 ; Align 73004 158 30 ; Align 72971 168 753 utg212_pilon exonerate:protein2genome:local gene 291407 292563 1663 + . gene_id 0 ; sequence GL50803_13210-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 291407 292563 . + . utg212_pilon exonerate:protein2genome:local exon 291407 292563 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 291407 292563 1663 + . alignment_id 0 ; Query GL50803_13210-t26_1-p1 ; Align 291407 1 1074 ; Align 292483 360 81 utg731_pilon exonerate:protein2genome:local gene 800533 802472 2705 + . gene_id 0 ; sequence GL50803_13215-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 800533 801618 . + . utg731_pilon exonerate:protein2genome:local exon 800533 801618 . + . insertions 0 ; deletions 3 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local splice5 801619 801620 . + . intron_id 1 ; splice_site "CT" utg731_pilon exonerate:protein2genome:local intron 801619 801663 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 801662 801663 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 801664 802472 . + . utg731_pilon exonerate:protein2genome:local exon 801664 802472 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 800533 802472 2705 + . alignment_id 0 ; Query GL50803_13215-t26_1-p1 ; Align 800533 2 96 ; Align 800631 34 939 ; Align 801570 350 48 ; Align 801669 367 804 utg11_pilon exonerate:protein2genome:local gene 1718365 1720476 3223 + . gene_id 0 ; sequence GL50803_13220-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1718365 1720476 . + . utg11_pilon exonerate:protein2genome:local exon 1718365 1720476 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1718365 1720476 3223 + . alignment_id 0 ; Query GL50803_13220-t26_1-p1 ; Align 1718365 1 2112 utg99_pilon exonerate:protein2genome:local gene 481535 482158 963 + . gene_id 0 ; sequence GL50803_13223-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 481535 482158 . + . utg99_pilon exonerate:protein2genome:local exon 481535 482158 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 481535 482158 963 + . alignment_id 0 ; Query GL50803_13223-t26_1-p1 ; Align 481535 1 624 utg11_pilon exonerate:protein2genome:local gene 1641599 1642390 1428 + . gene_id 0 ; sequence GL50803_13225-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1641599 1642390 . + . utg11_pilon exonerate:protein2genome:local exon 1641599 1642390 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1641599 1642390 1428 + . alignment_id 0 ; Query GL50803_13225-t26_1-p1 ; Align 1641599 1 792 utg349_pilon exonerate:protein2genome:local gene 1337935 1338636 929 + . gene_id 0 ; sequence GL50803_13227-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1337935 1338636 . + . utg349_pilon exonerate:protein2genome:local exon 1337935 1338636 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1337935 1338636 929 + . alignment_id 0 ; Query GL50803_13227-t26_1-p1 ; Align 1337935 1 702 utg731_pilon exonerate:protein2genome:local gene 1457147 1457566 659 + . gene_id 0 ; sequence GL50803_13231-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1457147 1457566 . + . utg731_pilon exonerate:protein2genome:local exon 1457147 1457566 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1457147 1457566 659 + . alignment_id 0 ; Query GL50803_13231-t26_1-p1 ; Align 1457147 1 420 utg64_pilon exonerate:protein2genome:local gene 493634 533697 441 - . gene_id 0 ; sequence GL50803_13239-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 533635 533697 . - . utg64_pilon exonerate:protein2genome:local exon 533635 533697 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 533633 533634 . - . intron_id 1 ; splice_site "GA" utg64_pilon exonerate:protein2genome:local intron 493898 533634 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 493898 493899 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 493634 493897 . - . utg64_pilon exonerate:protein2genome:local exon 493634 493897 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 493634 533697 441 - . alignment_id 0 ; Query GL50803_13239-t26_1-p1 ; Align 533698 25 63 ; Align 493898 46 264 utg308_pilon exonerate:protein2genome:local gene 390044 391036 1409 - . gene_id 0 ; sequence GL50803_13262-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 390044 391036 . - . utg308_pilon exonerate:protein2genome:local exon 390044 391036 . - . insertions 0 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 390044 391036 1409 - . alignment_id 0 ; Query GL50803_13262-t26_1-p1 ; Align 391037 1 540 ; Align 390497 183 429 ; Align 390068 327 24 utg349_pilon exonerate:protein2genome:local gene 1408889 1409152 418 - . gene_id 0 ; sequence GL50803_13268-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1408889 1409152 . - . utg349_pilon exonerate:protein2genome:local exon 1408889 1409152 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1408889 1409152 418 - . alignment_id 0 ; Query GL50803_13268-t26_1-p1 ; Align 1409153 1 264 utg349_pilon exonerate:protein2genome:local gene 1411077 1412126 1067 + . gene_id 0 ; sequence GL50803_13269-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1411077 1412126 . + . utg349_pilon exonerate:protein2genome:local exon 1411077 1412126 . + . insertions 15 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 1411077 1412126 1067 + . alignment_id 0 ; Query GL50803_13269-t26_1-p1 ; Align 1411077 1 639 ; Align 1411716 215 6 ; Align 1411722 221 78 ; Align 1411812 247 12 ; Align 1411827 251 300 utg212_pilon exonerate:protein2genome:local gene 33524 34624 1792 - . gene_id 0 ; sequence GL50803_13272-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 33524 34624 . - . utg212_pilon exonerate:protein2genome:local exon 33524 34624 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 33524 34624 1792 - . alignment_id 0 ; Query GL50803_13272-t26_1-p1 ; Align 34625 1 1101 utg212_pilon exonerate:protein2genome:local gene 32704 33408 1154 - . gene_id 0 ; sequence GL50803_13273-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 32704 33408 . - . utg212_pilon exonerate:protein2genome:local exon 32704 33408 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 32704 33408 1154 - . alignment_id 0 ; Query GL50803_13273-t26_1-p1 ; Align 33409 1 705 utg212_pilon exonerate:protein2genome:local gene 31392 32652 1584 + . gene_id 0 ; sequence GL50803_13274-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 31392 32652 . + . utg212_pilon exonerate:protein2genome:local exon 31392 32652 . + . insertions 0 ; deletions 1 ; frameshifts 4 utg212_pilon exonerate:protein2genome:local similarity 31392 32652 1584 + . alignment_id 0 ; Query GL50803_13274-t26_1-p1 ; Align 31392 1 234 ; Align 31628 79 780 ; Align 32410 340 243 utg64_pilon exonerate:protein2genome:local gene 382190 383524 1740 - . gene_id 0 ; sequence GL50803_13279-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 382190 383524 . - . utg64_pilon exonerate:protein2genome:local exon 382190 383524 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 382190 383524 1740 - . alignment_id 0 ; Query GL50803_13279-t26_1-p1 ; Align 383525 1 1335 utg99_pilon exonerate:protein2genome:local gene 379143 380813 1890 - . gene_id 0 ; sequence GL50803_13282-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 379143 380813 . - . utg99_pilon exonerate:protein2genome:local exon 379143 380813 . - . insertions 3 ; deletions 9 utg99_pilon exonerate:protein2genome:local similarity 379143 380813 1890 - . alignment_id 0 ; Query GL50803_13282-t26_1-p1 ; Align 380814 181 45 ; Align 380766 196 18 ; Align 380748 203 687 ; Align 380061 433 219 ; Align 379842 507 54 ; Align 379788 527 246 ; Align 379542 613 399 utg99_pilon exonerate:protein2genome:local gene 381819 382913 1408 + . gene_id 0 ; sequence GL50803_13283-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 381819 382913 . + . utg99_pilon exonerate:protein2genome:local exon 381819 382913 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 381819 382913 1408 + . alignment_id 0 ; Query GL50803_13283-t26_1-p1 ; Align 381819 1 1095 utg11_pilon exonerate:protein2genome:local gene 619202 620908 2478 - . gene_id 0 ; sequence GL50803_13288-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 619202 620908 . - . utg11_pilon exonerate:protein2genome:local exon 619202 620908 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 619202 620908 2478 - . alignment_id 0 ; Query GL50803_13288-t26_1-p1 ; Align 620909 1 1677 ; Align 619229 560 27 utg64_pilon exonerate:protein2genome:local gene 29135 30109 1429 + . gene_id 0 ; sequence GL50803_13310-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 29135 30109 . + . utg64_pilon exonerate:protein2genome:local exon 29135 30109 . + . insertions 3 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 29135 30109 1429 + . alignment_id 0 ; Query GL50803_13310-t26_1-p1 ; Align 29135 1 813 ; Align 29948 273 114 ; Align 30065 311 45 utg64_pilon exonerate:protein2genome:local gene 266127 268040 2811 - . gene_id 0 ; sequence GL50803_13315-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 266127 268040 . - . utg64_pilon exonerate:protein2genome:local exon 266127 268040 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 266127 268040 2811 - . alignment_id 0 ; Query GL50803_13315-t26_1-p1 ; Align 268041 1 1914 utg64_pilon exonerate:protein2genome:local gene 264972 265949 1200 + . gene_id 0 ; sequence GL50803_13316-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 264972 265949 . + . utg64_pilon exonerate:protein2genome:local exon 264972 265949 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 264972 265949 1200 + . alignment_id 0 ; Query GL50803_13316-t26_1-p1 ; Align 264972 1 978 utg47_pilon exonerate:protein2genome:local gene 1107475 1109988 3545 + . gene_id 0 ; sequence GL50803_13323-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1107475 1109988 . + . utg47_pilon exonerate:protein2genome:local exon 1107475 1109988 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1107475 1109988 3545 + . alignment_id 0 ; Query GL50803_13323-t26_1-p1 ; Align 1107475 1 867 ; Align 1108342 291 1647 utg18_pilon exonerate:protein2genome:local gene 55506 56099 928 - . gene_id 0 ; sequence GL50803_13329-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 55506 56099 . - . utg18_pilon exonerate:protein2genome:local exon 55506 56099 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 55506 56099 928 - . alignment_id 0 ; Query GL50803_13329-t26_1-p1 ; Align 56100 15 594 utg18_pilon exonerate:protein2genome:local gene 54707 55429 984 + . gene_id 0 ; sequence GL50803_13330-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 54707 55429 . + . utg18_pilon exonerate:protein2genome:local exon 54707 55429 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 54707 55429 984 + . alignment_id 0 ; Query GL50803_13330-t26_1-p1 ; Align 54707 1 723 utg47_pilon exonerate:protein2genome:local gene 1985559 1986164 972 - . gene_id 0 ; sequence GL50803_13342-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1985559 1986164 . - . utg47_pilon exonerate:protein2genome:local exon 1985559 1986164 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1985559 1986164 972 - . alignment_id 0 ; Query GL50803_13342-t26_1-p1 ; Align 1986165 22 606 utg731_pilon exonerate:protein2genome:local gene 930202 931305 1759 + . gene_id 0 ; sequence GL50803_13346-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 930202 931305 . + . utg731_pilon exonerate:protein2genome:local exon 930202 931305 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 930202 931305 1759 + . alignment_id 0 ; Query GL50803_13346-t26_1-p1 ; Align 930202 1 1104 utg308_pilon exonerate:protein2genome:local gene 659926 661176 1881 - . gene_id 0 ; sequence GL50803_13350-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 659926 661176 . - . utg308_pilon exonerate:protein2genome:local exon 659926 661176 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 659926 661176 1881 - . alignment_id 0 ; Query GL50803_13350-t26_1-p1 ; Align 661177 22 1251 utg308_pilon exonerate:protein2genome:local gene 656610 659065 3331 + . gene_id 0 ; sequence GL50803_13352-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 656610 659065 . + . utg308_pilon exonerate:protein2genome:local exon 656610 659065 . + . insertions 0 ; deletions 2 ; frameshifts 5 utg308_pilon exonerate:protein2genome:local similarity 656610 659065 3331 + . alignment_id 0 ; Query GL50803_13352-t26_1-p1 ; Align 656610 1 477 ; Align 657087 161 264 ; Align 657355 249 231 ; Align 657586 327 60 ; Align 657647 347 1419 utg18_pilon exonerate:protein2genome:local gene 217290 217799 823 - . gene_id 0 ; sequence GL50803_13354-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 217290 217799 . - . utg18_pilon exonerate:protein2genome:local exon 217290 217799 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 217290 217799 823 - . alignment_id 0 ; Query GL50803_13354-t26_1-p1 ; Align 217800 1 510 utg11_pilon exonerate:protein2genome:local gene 734197 735656 2020 - . gene_id 0 ; sequence GL50803_13360-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 734197 735656 . - . utg11_pilon exonerate:protein2genome:local exon 734197 735656 . - . insertions 15 ; deletions 2 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 734197 735656 2020 - . alignment_id 0 ; Query GL50803_13360-t26_1-p1 ; Align 735657 1 36 ; Align 735620 14 486 ; Align 735133 176 444 ; Align 734686 324 18 ; Align 734656 330 75 ; Align 734581 356 384 utg99_pilon exonerate:protein2genome:local gene 308784 310175 2185 - . gene_id 0 ; sequence GL50803_13372-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 308784 310175 . - . utg99_pilon exonerate:protein2genome:local exon 308784 310175 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 308784 310175 2185 - . alignment_id 0 ; Query GL50803_13372-t26_1-p1 ; Align 310176 1 1392 utg731_pilon exonerate:protein2genome:local gene 285375 287726 2972 - . gene_id 0 ; sequence GL50803_13382-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 285375 287726 . - . utg731_pilon exonerate:protein2genome:local exon 285375 287726 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 285375 287726 2972 - . alignment_id 0 ; Query GL50803_13382-t26_1-p1 ; Align 287727 17 2352 utg47_pilon exonerate:protein2genome:local gene 305376 1414508 1881 - . gene_id 0 ; sequence GL50803_13390-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1414367 1414508 . - . utg47_pilon exonerate:protein2genome:local exon 1414367 1414508 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1414365 1414366 . - . intron_id 1 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local intron 1328701 1414366 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1328701 1328702 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1328569 1328700 . - . utg47_pilon exonerate:protein2genome:local exon 1328569 1328700 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1328567 1328568 . - . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1171339 1328568 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1171339 1171340 . - . intron_id 1 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local cds 1171291 1171338 . - . utg47_pilon exonerate:protein2genome:local exon 1171291 1171338 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1171289 1171290 . - . intron_id 3 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 979424 1171290 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 979424 979425 . - . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 979397 979423 . - . utg47_pilon exonerate:protein2genome:local exon 979397 979423 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 979395 979396 . - . intron_id 4 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 921631 979396 . - . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 921631 921632 . - . intron_id 3 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 921346 921630 . - . utg47_pilon exonerate:protein2genome:local exon 921346 921630 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 921344 921345 . - . intron_id 5 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 722248 921345 . - . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 722248 722249 . - . intron_id 4 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 722229 722247 . - . utg47_pilon exonerate:protein2genome:local exon 722229 722247 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 722227 722228 . - . intron_id 6 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local intron 635783 722228 . - . intron_id 6 utg47_pilon exonerate:protein2genome:local splice3 635783 635784 . - . intron_id 5 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 635757 635782 . - . utg47_pilon exonerate:protein2genome:local exon 635757 635782 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 635755 635756 . - . intron_id 7 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 626789 635756 . - . intron_id 7 utg47_pilon exonerate:protein2genome:local splice3 626789 626790 . - . intron_id 6 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 625630 626788 . - . utg47_pilon exonerate:protein2genome:local exon 625630 626788 . - . insertions 3 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 625628 625629 . - . intron_id 8 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 443023 625629 . - . intron_id 8 utg47_pilon exonerate:protein2genome:local splice3 443023 443024 . - . intron_id 7 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 442895 443022 . - . utg47_pilon exonerate:protein2genome:local exon 442895 443022 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 442893 442894 . - . intron_id 9 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local intron 305522 442894 . - . intron_id 9 utg47_pilon exonerate:protein2genome:local splice3 305522 305523 . - . intron_id 8 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 305376 305521 . - . utg47_pilon exonerate:protein2genome:local exon 305376 305521 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 305376 1414508 1881 - . alignment_id 0 ; Query GL50803_13390-t26_1-p1 ; Align 1414509 19 45 ; Align 1414461 34 93 ; Align 1328699 66 129 ; Align 1171337 110 45 ; Align 979422 126 24 ; Align 921629 135 264 ; Align 921362 223 15 ; Align 722246 229 15 ; Align 635782 235 24 ; Align 626787 244 288 ; Align 626499 342 303 ; Align 626196 444 219 ; Align 625974 517 342 ; Align 443022 632 126 ; Align 305520 675 21 ; Align 305496 682 120 utg11_pilon exonerate:protein2genome:local gene 1130235 1132256 2707 + . gene_id 0 ; sequence GL50803_13393-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1130235 1132256 . + . utg11_pilon exonerate:protein2genome:local exon 1130235 1132256 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1130235 1132256 2707 + . alignment_id 0 ; Query GL50803_13393-t26_1-p1 ; Align 1130235 1 753 ; Align 1130988 253 1269 utg47_pilon exonerate:protein2genome:local gene 869001 869279 372 + . gene_id 0 ; sequence GL50803_13402-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 869001 869279 . + . utg47_pilon exonerate:protein2genome:local exon 869001 869279 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 869001 869279 372 + . alignment_id 0 ; Query GL50803_13402-t26_1-p1 ; Align 869001 4 279 utg265_pilon exonerate:protein2genome:local gene 622277 623029 1215 - . gene_id 0 ; sequence GL50803_13412-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 622277 623029 . - . utg265_pilon exonerate:protein2genome:local exon 622277 623029 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 622277 623029 1215 - . alignment_id 0 ; Query GL50803_13412-t26_1-p1 ; Align 623030 1 753 utg265_pilon exonerate:protein2genome:local gene 623086 623634 830 + . gene_id 0 ; sequence GL50803_13413-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 623086 623634 . + . utg265_pilon exonerate:protein2genome:local exon 623086 623634 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 623086 623634 830 + . alignment_id 0 ; Query GL50803_13413-t26_1-p1 ; Align 623086 1 549 utg99_pilon exonerate:protein2genome:local gene 156141 156428 252 - . gene_id 0 ; sequence GL50803_134209-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 156141 156428 . - . utg99_pilon exonerate:protein2genome:local exon 156141 156428 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 156141 156428 252 - . alignment_id 0 ; Query GL50803_134209-t26_1-p1 ; Align 156429 1 288 utg265_pilon exonerate:protein2genome:local gene 871559 871852 252 - . gene_id 0 ; sequence GL50803_134209-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 871559 871852 . - . utg265_pilon exonerate:protein2genome:local exon 871559 871852 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 871559 871852 252 - . alignment_id 0 ; Query GL50803_134209-t26_1-p1 ; Align 871853 1 294 utg99_pilon exonerate:protein2genome:local gene 156141 156428 252 - . gene_id 0 ; sequence GL50803_134210-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 156141 156428 . - . utg99_pilon exonerate:protein2genome:local exon 156141 156428 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 156141 156428 252 - . alignment_id 0 ; Query GL50803_134210-t26_1-p1 ; Align 156429 1 288 utg265_pilon exonerate:protein2genome:local gene 871559 871852 252 - . gene_id 0 ; sequence GL50803_134210-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 871559 871852 . - . utg265_pilon exonerate:protein2genome:local exon 871559 871852 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 871559 871852 252 - . alignment_id 0 ; Query GL50803_134210-t26_1-p1 ; Align 871853 1 294 utg47_pilon exonerate:protein2genome:local gene 1533042 1533795 971 + . gene_id 0 ; sequence GL50803_13427-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1533042 1533795 . + . utg47_pilon exonerate:protein2genome:local exon 1533042 1533795 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1533042 1533795 971 + . alignment_id 0 ; Query GL50803_13427-t26_1-p1 ; Align 1533042 1 54 ; Align 1533097 20 699 utg47_pilon exonerate:protein2genome:local gene 1531823 1532550 1056 - . gene_id 0 ; sequence GL50803_13428-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1531823 1532550 . - . utg47_pilon exonerate:protein2genome:local exon 1531823 1532550 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1531823 1532550 1056 - . alignment_id 0 ; Query GL50803_13428-t26_1-p1 ; Align 1532551 8 114 ; Align 1532436 46 48 ; Align 1532387 62 564 utg731_pilon exonerate:protein2genome:local gene 1238729 1238950 245 + . gene_id 0 ; sequence GL50803_134293-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1238729 1238950 . + . utg731_pilon exonerate:protein2genome:local exon 1238729 1238950 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1238729 1238950 245 + . alignment_id 0 ; Query GL50803_134293-t26_1-p1 ; Align 1238729 2 222 utg731_pilon exonerate:protein2genome:local gene 1238729 1238950 245 + . gene_id 0 ; sequence GL50803_134294-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1238729 1238950 . + . utg731_pilon exonerate:protein2genome:local exon 1238729 1238950 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1238729 1238950 245 + . alignment_id 0 ; Query GL50803_134294-t26_1-p1 ; Align 1238729 2 222 utg731_pilon exonerate:protein2genome:local gene 1238729 1238950 245 + . gene_id 0 ; sequence GL50803_134295-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1238729 1238950 . + . utg731_pilon exonerate:protein2genome:local exon 1238729 1238950 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1238729 1238950 245 + . alignment_id 0 ; Query GL50803_134295-t26_1-p1 ; Align 1238729 2 222 utg11_pilon exonerate:protein2genome:local gene 506022 506978 1281 + . gene_id 0 ; sequence GL50803_13437-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 506022 506978 . + . utg11_pilon exonerate:protein2genome:local exon 506022 506978 . + . insertions 9 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 506022 506978 1281 + . alignment_id 0 ; Query GL50803_13437-t26_1-p1 ; Align 506022 1 501 ; Align 506532 168 447 utg99_pilon exonerate:protein2genome:local gene 541880 542327 348 + . gene_id 0 ; sequence GL50803_134377-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 541880 542327 . + . utg99_pilon exonerate:protein2genome:local exon 541880 542327 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg99_pilon exonerate:protein2genome:local similarity 541880 542327 348 + . alignment_id 0 ; Query GL50803_134377-t26_1-p1 ; Align 541880 1 345 ; Align 542226 116 102 utg99_pilon exonerate:protein2genome:local gene 497476 497923 348 - . gene_id 0 ; sequence GL50803_134377-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 497476 497923 . - . utg99_pilon exonerate:protein2genome:local exon 497476 497923 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg99_pilon exonerate:protein2genome:local similarity 497476 497923 348 - . alignment_id 0 ; Query GL50803_134377-t26_1-p1 ; Align 497924 1 345 ; Align 497578 116 102 utg99_pilon exonerate:protein2genome:local gene 541880 542327 348 + . gene_id 0 ; sequence GL50803_134378-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 541880 542327 . + . utg99_pilon exonerate:protein2genome:local exon 541880 542327 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg99_pilon exonerate:protein2genome:local similarity 541880 542327 348 + . alignment_id 0 ; Query GL50803_134378-t26_1-p1 ; Align 541880 1 345 ; Align 542226 116 102 utg99_pilon exonerate:protein2genome:local gene 497476 497923 348 - . gene_id 0 ; sequence GL50803_134378-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 497476 497923 . - . utg99_pilon exonerate:protein2genome:local exon 497476 497923 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg99_pilon exonerate:protein2genome:local similarity 497476 497923 348 - . alignment_id 0 ; Query GL50803_134378-t26_1-p1 ; Align 497924 1 345 ; Align 497578 116 102 utg11_pilon exonerate:protein2genome:local gene 510096 510665 698 + . gene_id 0 ; sequence GL50803_13438-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 510096 510665 . + . utg11_pilon exonerate:protein2genome:local exon 510096 510665 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 510096 510665 698 + . alignment_id 0 ; Query GL50803_13438-t26_1-p1 ; Align 510096 1 570 utg47_pilon exonerate:protein2genome:local gene 445896 446282 651 - . gene_id 0 ; sequence GL50803_134441-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 445896 446282 . - . utg47_pilon exonerate:protein2genome:local exon 445896 446282 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 445896 446282 651 - . alignment_id 0 ; Query GL50803_134441-t26_1-p1 ; Align 446283 1 387 utg47_pilon exonerate:protein2genome:local gene 389217 389603 651 - . gene_id 0 ; sequence GL50803_134441-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 389217 389603 . - . utg47_pilon exonerate:protein2genome:local exon 389217 389603 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 389217 389603 651 - . alignment_id 0 ; Query GL50803_134441-t26_1-p1 ; Align 389604 1 387 utg47_pilon exonerate:protein2genome:local gene 445896 446282 651 - . gene_id 0 ; sequence GL50803_134442-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 445896 446282 . - . utg47_pilon exonerate:protein2genome:local exon 445896 446282 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 445896 446282 651 - . alignment_id 0 ; Query GL50803_134442-t26_1-p1 ; Align 446283 1 387 utg47_pilon exonerate:protein2genome:local gene 389217 389603 651 - . gene_id 0 ; sequence GL50803_134442-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 389217 389603 . - . utg47_pilon exonerate:protein2genome:local exon 389217 389603 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 389217 389603 651 - . alignment_id 0 ; Query GL50803_134442-t26_1-p1 ; Align 389604 1 387 utg212_pilon exonerate:protein2genome:local gene 370216 370879 1083 + . gene_id 0 ; sequence GL50803_1345-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 370216 370879 . + . utg212_pilon exonerate:protein2genome:local exon 370216 370879 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 370216 370879 1083 + . alignment_id 0 ; Query GL50803_1345-t26_1-p1 ; Align 370216 1 141 ; Align 370358 48 522 utg11_pilon exonerate:protein2genome:local gene 1734024 1737950 5998 - . gene_id 0 ; sequence GL50803_13452-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1734024 1737950 . - . utg11_pilon exonerate:protein2genome:local exon 1734024 1737950 . - . insertions 18 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1734024 1737950 5998 - . alignment_id 0 ; Query GL50803_13452-t26_1-p1 ; Align 1737951 1 630 ; Align 1737318 211 1905 ; Align 1735413 847 249 ; Align 1735149 930 1125 utg11_pilon exonerate:protein2genome:local gene 1725471 1727189 1980 + . gene_id 0 ; sequence GL50803_13455-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1725471 1727189 . + . utg11_pilon exonerate:protein2genome:local exon 1725471 1727189 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1725471 1727189 1980 + . alignment_id 0 ; Query GL50803_13455-t26_1-p1 ; Align 1725471 1 867 ; Align 1726338 291 852 utg47_pilon exonerate:protein2genome:local gene 1550661 1552013 1725 + . gene_id 0 ; sequence GL50803_13464-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1550661 1552013 . + . utg47_pilon exonerate:protein2genome:local exon 1550661 1552013 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1550661 1552013 1725 + . alignment_id 0 ; Query GL50803_13464-t26_1-p1 ; Align 1550661 1 1353 utg64_pilon exonerate:protein2genome:local gene 303793 304722 1580 + . gene_id 0 ; sequence GL50803_13467-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 303793 304722 . + . utg64_pilon exonerate:protein2genome:local exon 303793 304722 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 303793 304722 1580 + . alignment_id 0 ; Query GL50803_13467-t26_1-p1 ; Align 303793 1 930 utg64_pilon exonerate:protein2genome:local gene 302789 303742 1231 - . gene_id 0 ; sequence GL50803_13469-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 302789 303742 . - . utg64_pilon exonerate:protein2genome:local exon 302789 303742 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 302789 303742 1231 - . alignment_id 0 ; Query GL50803_13469-t26_1-p1 ; Align 303743 1 954 utg99_pilon exonerate:protein2genome:local gene 52095 53939 1820 - . gene_id 0 ; sequence GL50803_134710-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 52095 53939 . - . utg99_pilon exonerate:protein2genome:local exon 52095 53939 . - . insertions 12 ; deletions 14 ; frameshifts 6 utg99_pilon exonerate:protein2genome:local similarity 52095 53939 1820 - . alignment_id 0 ; Query GL50803_134710-t26_1-p1 ; Align 53940 14 219 ; Align 53719 87 114 ; Align 53605 127 177 ; Align 53425 186 78 ; Align 53347 213 54 ; Align 53293 232 174 ; Align 53117 290 210 ; Align 52907 364 54 ; Align 52850 382 57 ; Align 52790 401 201 ; Align 52586 468 27 ; Align 52557 477 75 ; Align 52482 503 72 ; Align 52410 529 132 ; Align 52278 575 30 ; Align 52248 586 153 utg212_pilon exonerate:protein2genome:local gene 254534 254926 479 + . gene_id 0 ; sequence GL50803_134711-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 254534 254926 . + . utg212_pilon exonerate:protein2genome:local exon 254534 254926 . + . insertions 3 ; deletions 3 utg212_pilon exonerate:protein2genome:local similarity 254534 254926 479 + . alignment_id 0 ; Query GL50803_134711-t26_1-p1 ; Align 254534 5 63 ; Align 254597 29 48 ; Align 254648 45 279 utg47_pilon exonerate:protein2genome:local gene 1213563 1232573 8664 - . gene_id 0 ; sequence GL50803_13475-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1229376 1232573 . - . utg47_pilon exonerate:protein2genome:local exon 1229376 1232573 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1229374 1229375 . - . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1228080 1229375 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1228080 1228081 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1227623 1228079 . - . utg47_pilon exonerate:protein2genome:local exon 1227623 1228079 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1227621 1227622 . - . intron_id 2 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 1224664 1227622 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1224664 1224665 . - . intron_id 1 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 1224020 1224663 . - . utg47_pilon exonerate:protein2genome:local exon 1224020 1224663 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1224018 1224019 . - . intron_id 3 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 1215618 1224019 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 1215618 1215619 . - . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1213563 1215617 . - . utg47_pilon exonerate:protein2genome:local exon 1213563 1215617 . - . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 1213563 1232573 8664 - . alignment_id 0 ; Query GL50803_13475-t26_1-p1 ; Align 1232574 1 3198 ; Align 1228080 1067 456 ; Align 1224662 1220 642 ; Align 1215618 1434 852 ; Align 1214766 1721 393 ; Align 1214373 1853 810 utg47_pilon exonerate:protein2genome:local gene 1640333 1640869 942 + . gene_id 0 ; sequence GL50803_13478-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1640333 1640869 . + . utg47_pilon exonerate:protein2genome:local exon 1640333 1640869 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1640333 1640869 942 + . alignment_id 0 ; Query GL50803_13478-t26_1-p1 ; Align 1640333 1 537 utg47_pilon exonerate:protein2genome:local gene 1638641 1640170 1947 - . gene_id 0 ; sequence GL50803_13479-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1638641 1640170 . - . utg47_pilon exonerate:protein2genome:local exon 1638641 1640170 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1638641 1640170 1947 - . alignment_id 0 ; Query GL50803_13479-t26_1-p1 ; Align 1640171 1 1530 utg99_pilon exonerate:protein2genome:local gene 549056 549841 621 - . gene_id 0 ; sequence GL50803_13495-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 549056 549841 . - . utg99_pilon exonerate:protein2genome:local exon 549056 549841 . - . insertions 3 ; deletions 2 utg99_pilon exonerate:protein2genome:local similarity 549056 549841 621 - . alignment_id 0 ; Query GL50803_13495-t26_1-p1 ; Align 549842 1 414 ; Align 549428 140 24 ; Align 549404 149 162 ; Align 549239 203 183 utg349_pilon exonerate:protein2genome:local gene 585494 587173 2596 - . gene_id 0 ; sequence GL50803_13500-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 585494 587173 . - . utg349_pilon exonerate:protein2genome:local exon 585494 587173 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 585494 587173 2596 - . alignment_id 0 ; Query GL50803_13500-t26_1-p1 ; Align 587174 1 1119 ; Align 586055 377 561 utg731_pilon exonerate:protein2genome:local gene 57023 57319 500 + . gene_id 0 ; sequence GL50803_135001-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 57023 57319 . + . utg731_pilon exonerate:protein2genome:local exon 57023 57319 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 57023 57319 500 + . alignment_id 0 ; Query GL50803_135001-t26_1-p1 ; Align 57023 1 297 utg731_pilon exonerate:protein2genome:local gene 82100 82396 500 - . gene_id 0 ; sequence GL50803_135001-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 82100 82396 . - . utg731_pilon exonerate:protein2genome:local exon 82100 82396 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 82100 82396 500 - . alignment_id 0 ; Query GL50803_135001-t26_1-p1 ; Align 82397 1 297 utg731_pilon exonerate:protein2genome:local gene 57023 57319 500 + . gene_id 0 ; sequence GL50803_135002-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 57023 57319 . + . utg731_pilon exonerate:protein2genome:local exon 57023 57319 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 57023 57319 500 + . alignment_id 0 ; Query GL50803_135002-t26_1-p1 ; Align 57023 1 297 utg731_pilon exonerate:protein2genome:local gene 82100 82396 500 - . gene_id 0 ; sequence GL50803_135002-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 82100 82396 . - . utg731_pilon exonerate:protein2genome:local exon 82100 82396 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 82100 82396 500 - . alignment_id 0 ; Query GL50803_135002-t26_1-p1 ; Align 82397 1 297 utg731_pilon exonerate:protein2genome:local gene 57023 57319 500 + . gene_id 0 ; sequence GL50803_135003-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 57023 57319 . + . utg731_pilon exonerate:protein2genome:local exon 57023 57319 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 57023 57319 500 + . alignment_id 0 ; Query GL50803_135003-t26_1-p1 ; Align 57023 1 297 utg731_pilon exonerate:protein2genome:local gene 82100 82396 500 - . gene_id 0 ; sequence GL50803_135003-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 82100 82396 . - . utg731_pilon exonerate:protein2genome:local exon 82100 82396 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 82100 82396 500 - . alignment_id 0 ; Query GL50803_135003-t26_1-p1 ; Align 82397 1 297 utg99_pilon exonerate:protein2genome:local gene 453007 453801 793 - . gene_id 0 ; sequence GL50803_13504-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 453007 453801 . - . utg99_pilon exonerate:protein2genome:local exon 453007 453801 . - . insertions 0 ; deletions 9 utg99_pilon exonerate:protein2genome:local similarity 453007 453801 793 - . alignment_id 0 ; Query GL50803_13504-t26_1-p1 ; Align 453802 1 276 ; Align 453526 95 135 ; Align 453391 145 264 ; Align 453127 234 15 ; Align 453112 240 105 utg47_pilon exonerate:protein2genome:local gene 1058905 1059741 1265 + . gene_id 0 ; sequence GL50803_13512-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1058905 1059741 . + . utg47_pilon exonerate:protein2genome:local exon 1058905 1059741 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1058905 1059741 1265 + . alignment_id 0 ; Query GL50803_13512-t26_1-p1 ; Align 1058905 1 837 utg47_pilon exonerate:protein2genome:local gene 395250 434983 441 - . gene_id 0 ; sequence GL50803_13520-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 434883 434983 . - . utg47_pilon exonerate:protein2genome:local exon 434883 434983 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 434881 434882 . - . intron_id 1 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 395527 434882 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 395527 395528 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 395250 395526 . - . utg47_pilon exonerate:protein2genome:local exon 395250 395526 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 395250 434983 441 - . alignment_id 0 ; Query GL50803_13520-t26_1-p1 ; Align 434984 1 99 ; Align 395526 35 129 ; Align 395397 80 147 utg47_pilon exonerate:protein2genome:local gene 1492394 1493116 877 + . gene_id 0 ; sequence GL50803_13523-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1492394 1493116 . + . utg47_pilon exonerate:protein2genome:local exon 1492394 1493116 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1492394 1493116 877 + . alignment_id 0 ; Query GL50803_13523-t26_1-p1 ; Align 1492394 1 723 utg11_pilon exonerate:protein2genome:local gene 1272594 1273031 716 + . gene_id 0 ; sequence GL50803_135231-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1272594 1273031 . + . utg11_pilon exonerate:protein2genome:local exon 1272594 1273031 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1272594 1273031 716 + . alignment_id 0 ; Query GL50803_135231-t26_1-p1 ; Align 1272594 1 438 utg11_pilon exonerate:protein2genome:local gene 1642404 1642841 716 - . gene_id 0 ; sequence GL50803_135231-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1642404 1642841 . - . utg11_pilon exonerate:protein2genome:local exon 1642404 1642841 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1642404 1642841 716 - . alignment_id 0 ; Query GL50803_135231-t26_1-p1 ; Align 1642842 1 438 utg47_pilon exonerate:protein2genome:local gene 1495674 1496868 1452 + . gene_id 0 ; sequence GL50803_13524-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1495674 1496868 . + . utg47_pilon exonerate:protein2genome:local exon 1495674 1496868 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1495674 1496868 1452 + . alignment_id 0 ; Query GL50803_13524-t26_1-p1 ; Align 1495674 1 36 ; Align 1495711 13 789 ; Align 1496500 277 369 utg47_pilon exonerate:protein2genome:local gene 1497279 1498370 1378 - . gene_id 0 ; sequence GL50803_13525-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1497279 1498370 . - . utg47_pilon exonerate:protein2genome:local exon 1497279 1498370 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1497279 1498370 1378 - . alignment_id 0 ; Query GL50803_13525-t26_1-p1 ; Align 1498371 1 1092 utg265_pilon exonerate:protein2genome:local gene 1075644 1075826 102 - . gene_id 0 ; sequence GL50803_135251-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1075644 1075826 . - . utg265_pilon exonerate:protein2genome:local exon 1075644 1075826 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1075644 1075826 102 - . alignment_id 0 ; Query GL50803_135251-t26_1-p1 ; Align 1075827 5 183 utg265_pilon exonerate:protein2genome:local gene 1075644 1075826 102 - . gene_id 0 ; sequence GL50803_135252-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1075644 1075826 . - . utg265_pilon exonerate:protein2genome:local exon 1075644 1075826 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1075644 1075826 102 - . alignment_id 0 ; Query GL50803_135252-t26_1-p1 ; Align 1075827 5 183 utg265_pilon exonerate:protein2genome:local gene 1075644 1075826 102 - . gene_id 0 ; sequence GL50803_135253-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1075644 1075826 . - . utg265_pilon exonerate:protein2genome:local exon 1075644 1075826 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1075644 1075826 102 - . alignment_id 0 ; Query GL50803_135253-t26_1-p1 ; Align 1075827 5 183 utg308_pilon exonerate:protein2genome:local gene 889428 889937 683 + . gene_id 0 ; sequence GL50803_135269-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 889428 889937 . + . utg308_pilon exonerate:protein2genome:local exon 889428 889937 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 889428 889937 683 + . alignment_id 0 ; Query GL50803_135269-t26_1-p1 ; Align 889428 1 510 utg308_pilon exonerate:protein2genome:local gene 889428 889937 683 + . gene_id 0 ; sequence GL50803_135270-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 889428 889937 . + . utg308_pilon exonerate:protein2genome:local exon 889428 889937 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 889428 889937 683 + . alignment_id 0 ; Query GL50803_135270-t26_1-p1 ; Align 889428 1 510 utg64_pilon exonerate:protein2genome:local gene 1016023 1017945 2711 + . gene_id 0 ; sequence GL50803_13528-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1016023 1017945 . + . utg64_pilon exonerate:protein2genome:local exon 1016023 1017945 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1016023 1017945 2711 + . alignment_id 0 ; Query GL50803_13528-t26_1-p1 ; Align 1016023 1 1923 utg7494_pilon exonerate:protein2genome:local gene 23857 29723 248 - . gene_id 0 ; sequence GL50803_135293-t26_1-p1 ; gene_orientation + utg7494_pilon exonerate:protein2genome:local cds 29616 29723 . - . utg7494_pilon exonerate:protein2genome:local exon 29616 29723 . - . insertions 0 ; deletions 0 utg7494_pilon exonerate:protein2genome:local splice5 29614 29615 . - . intron_id 1 ; splice_site "GT" utg7494_pilon exonerate:protein2genome:local intron 23995 29615 . - . intron_id 1 utg7494_pilon exonerate:protein2genome:local splice3 23995 23996 . - . intron_id 0 ; splice_site "AT" utg7494_pilon exonerate:protein2genome:local cds 23857 23994 . - . utg7494_pilon exonerate:protein2genome:local exon 23857 23994 . - . insertions 0 ; deletions 0 utg7494_pilon exonerate:protein2genome:local similarity 23857 29723 248 - . alignment_id 0 ; Query GL50803_135293-t26_1-p1 ; Align 29724 1 108 ; Align 23995 37 138 utg7494_pilon exonerate:protein2genome:local gene 23857 29723 248 - . gene_id 0 ; sequence GL50803_135294-t26_1-p1 ; gene_orientation + utg7494_pilon exonerate:protein2genome:local cds 29616 29723 . - . utg7494_pilon exonerate:protein2genome:local exon 29616 29723 . - . insertions 0 ; deletions 0 utg7494_pilon exonerate:protein2genome:local splice5 29614 29615 . - . intron_id 1 ; splice_site "GT" utg7494_pilon exonerate:protein2genome:local intron 23995 29615 . - . intron_id 1 utg7494_pilon exonerate:protein2genome:local splice3 23995 23996 . - . intron_id 0 ; splice_site "AT" utg7494_pilon exonerate:protein2genome:local cds 23857 23994 . - . utg7494_pilon exonerate:protein2genome:local exon 23857 23994 . - . insertions 0 ; deletions 0 utg7494_pilon exonerate:protein2genome:local similarity 23857 29723 248 - . alignment_id 0 ; Query GL50803_135294-t26_1-p1 ; Align 29724 1 108 ; Align 23995 37 138 utg11_pilon exonerate:protein2genome:local gene 1606749 1607264 691 - . gene_id 0 ; sequence GL50803_13539-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1606749 1607264 . - . utg11_pilon exonerate:protein2genome:local exon 1606749 1607264 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1606749 1607264 691 - . alignment_id 0 ; Query GL50803_13539-t26_1-p1 ; Align 1607265 1 516 utg11_pilon exonerate:protein2genome:local gene 295211 295765 904 - . gene_id 0 ; sequence GL50803_13550-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 295211 295765 . - . utg11_pilon exonerate:protein2genome:local exon 295211 295765 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 295211 295765 904 - . alignment_id 0 ; Query GL50803_13550-t26_1-p1 ; Align 295766 1 555 utg308_pilon exonerate:protein2genome:local gene 204710 207757 3774 + . gene_id 0 ; sequence GL50803_13555-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 204710 206364 . + . utg308_pilon exonerate:protein2genome:local exon 204710 206364 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 206365 206366 . + . intron_id 1 ; splice_site "GA" utg308_pilon exonerate:protein2genome:local intron 206365 206406 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 206405 206406 . + . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 206407 206505 . + . utg308_pilon exonerate:protein2genome:local exon 206407 206505 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local splice5 206506 206507 . + . intron_id 2 ; splice_site "GA" utg308_pilon exonerate:protein2genome:local intron 206506 206538 . + . intron_id 2 utg308_pilon exonerate:protein2genome:local splice3 206537 206538 . + . intron_id 1 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 206539 207757 . + . utg308_pilon exonerate:protein2genome:local exon 206539 207757 . + . insertions 9 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 204710 207757 3774 + . alignment_id 0 ; Query GL50803_13555-t26_1-p1 ; Align 204710 1 1653 ; Align 206408 553 48 ; Align 206456 570 48 ; Align 206540 587 42 ; Align 206582 602 333 ; Align 206924 713 225 ; Align 207149 789 609 utg64_pilon exonerate:protein2genome:local gene 558743 559411 1060 + . gene_id 0 ; sequence GL50803_13561-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 558743 559411 . + . utg64_pilon exonerate:protein2genome:local exon 558743 559411 . + . insertions 9 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 558743 559411 1060 + . alignment_id 0 ; Query GL50803_13561-t26_1-p1 ; Align 558743 1 252 ; Align 559004 85 408 utg11_pilon exonerate:protein2genome:local gene 707685 708098 305 - . gene_id 0 ; sequence GL50803_135725-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 707685 708098 . - . utg11_pilon exonerate:protein2genome:local exon 707685 708098 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 707685 708098 305 - . alignment_id 0 ; Query GL50803_135725-t26_1-p1 ; Align 708099 70 414 utg731_pilon exonerate:protein2genome:local gene 482198 482885 305 + . gene_id 0 ; sequence GL50803_135725-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 482198 482416 . + . utg731_pilon exonerate:protein2genome:local exon 482198 482416 . + . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 482417 482418 . + . intron_id 1 ; splice_site "GC" utg731_pilon exonerate:protein2genome:local intron 482417 482630 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 482629 482630 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 482631 482885 . + . utg731_pilon exonerate:protein2genome:local exon 482631 482885 . + . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 482198 482885 305 + . alignment_id 0 ; Query GL50803_135725-t26_1-p1 ; Align 482198 70 75 ; Align 482276 95 54 ; Align 482333 113 84 ; Align 482631 141 177 ; Align 482817 200 69 utg308_pilon exonerate:protein2genome:local gene 784275 784595 534 + . gene_id 0 ; sequence GL50803_13575-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 784275 784595 . + . utg308_pilon exonerate:protein2genome:local exon 784275 784595 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 784275 784595 534 + . alignment_id 0 ; Query GL50803_13575-t26_1-p1 ; Align 784275 1 321 utg308_pilon exonerate:protein2genome:local gene 785233 785526 452 - . gene_id 0 ; sequence GL50803_13576-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 785233 785526 . - . utg308_pilon exonerate:protein2genome:local exon 785233 785526 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 785233 785526 452 - . alignment_id 0 ; Query GL50803_13576-t26_1-p1 ; Align 785527 1 294 utg212_pilon exonerate:protein2genome:local gene 14045 115880 650 + . gene_id 0 ; sequence GL50803_135831-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14045 14449 . + . utg212_pilon exonerate:protein2genome:local exon 14045 14449 . + . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local splice5 14450 14451 . + . intron_id 1 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local intron 14450 115739 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115738 115739 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115740 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115740 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14045 115880 650 + . alignment_id 0 ; Query GL50803_135831-t26_1-p1 ; Align 14045 1 48 ; Align 14093 18 357 ; Align 115740 137 141 utg212_pilon exonerate:protein2genome:local gene 14045 115880 650 + . gene_id 0 ; sequence GL50803_135832-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14045 14449 . + . utg212_pilon exonerate:protein2genome:local exon 14045 14449 . + . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local splice5 14450 14451 . + . intron_id 1 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local intron 14450 115739 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115738 115739 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115740 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115740 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14045 115880 650 + . alignment_id 0 ; Query GL50803_135832-t26_1-p1 ; Align 14045 1 48 ; Align 14093 18 357 ; Align 115740 137 141 utg47_pilon exonerate:protein2genome:local gene 1944287 1945444 1841 + . gene_id 0 ; sequence GL50803_13584-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1944287 1945444 . + . utg47_pilon exonerate:protein2genome:local exon 1944287 1945444 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1944287 1945444 1841 + . alignment_id 0 ; Query GL50803_13584-t26_1-p1 ; Align 1944287 1 1158 utg11_pilon exonerate:protein2genome:local gene 1600492 1600971 674 + . gene_id 0 ; sequence GL50803_135869-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1600492 1600971 . + . utg11_pilon exonerate:protein2genome:local exon 1600492 1600971 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1600492 1600971 674 + . alignment_id 0 ; Query GL50803_135869-t26_1-p1 ; Align 1600492 1 480 utg11_pilon exonerate:protein2genome:local gene 1600492 1600971 674 + . gene_id 0 ; sequence GL50803_135870-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1600492 1600971 . + . utg11_pilon exonerate:protein2genome:local exon 1600492 1600971 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1600492 1600971 674 + . alignment_id 0 ; Query GL50803_135870-t26_1-p1 ; Align 1600492 1 480 utg731_pilon exonerate:protein2genome:local gene 300297 303401 4046 - . gene_id 0 ; sequence GL50803_135873-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 300297 303401 . - . utg731_pilon exonerate:protein2genome:local exon 300297 303401 . - . insertions 3 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 300297 303401 4046 - . alignment_id 0 ; Query GL50803_135873-t26_1-p1 ; Align 303402 1 1500 ; Align 301902 502 216 ; Align 301683 574 927 ; Align 300756 887 459 utg47_pilon exonerate:protein2genome:local gene 869001 869279 345 + . gene_id 0 ; sequence GL50803_135881-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 869001 869279 . + . utg47_pilon exonerate:protein2genome:local exon 869001 869279 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 869001 869279 345 + . alignment_id 0 ; Query GL50803_135881-t26_1-p1 ; Align 869001 4 279 utg47_pilon exonerate:protein2genome:local gene 869001 869279 345 + . gene_id 0 ; sequence GL50803_135882-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 869001 869279 . + . utg47_pilon exonerate:protein2genome:local exon 869001 869279 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 869001 869279 345 + . alignment_id 0 ; Query GL50803_135882-t26_1-p1 ; Align 869001 4 279 utg99_pilon exonerate:protein2genome:local gene 497597 498229 1049 + . gene_id 0 ; sequence GL50803_135885-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 497597 498229 . + . utg99_pilon exonerate:protein2genome:local exon 497597 498229 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 497597 498229 1049 + . alignment_id 0 ; Query GL50803_135885-t26_1-p1 ; Align 497597 1 633 utg99_pilon exonerate:protein2genome:local gene 497597 498229 1049 + . gene_id 0 ; sequence GL50803_135886-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 497597 498229 . + . utg99_pilon exonerate:protein2genome:local exon 497597 498229 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 497597 498229 1049 + . alignment_id 0 ; Query GL50803_135886-t26_1-p1 ; Align 497597 1 633 utg18_pilon exonerate:protein2genome:local gene 74096 76120 2812 + . gene_id 0 ; sequence GL50803_13590-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 74096 74881 . + . utg18_pilon exonerate:protein2genome:local exon 74096 74881 . + . insertions 3 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 74882 74883 . + . intron_id 1 ; splice_site "GA" utg18_pilon exonerate:protein2genome:local intron 74882 74941 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 74940 74941 . + . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 74942 76120 . + . utg18_pilon exonerate:protein2genome:local exon 74942 76120 . + . insertions 0 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 74096 76120 2812 + . alignment_id 0 ; Query GL50803_13590-t26_1-p1 ; Align 74096 1 678 ; Align 74777 227 105 ; Align 74942 262 24 ; Align 74966 271 1155 utg308_pilon exonerate:protein2genome:local gene 827087 827257 222 + . gene_id 0 ; sequence GL50803_135900-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 827087 827257 . + . utg308_pilon exonerate:protein2genome:local exon 827087 827257 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 827087 827257 222 + . alignment_id 0 ; Query GL50803_135900-t26_1-p1 ; Align 827087 1 171 utg308_pilon exonerate:protein2genome:local gene 827087 827257 222 + . gene_id 0 ; sequence GL50803_135901-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 827087 827257 . + . utg308_pilon exonerate:protein2genome:local exon 827087 827257 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 827087 827257 222 + . alignment_id 0 ; Query GL50803_135901-t26_1-p1 ; Align 827087 1 171 utg1966_pilon exonerate:protein2genome:local gene 52716 52856 108 + . gene_id 0 ; sequence GL50803_135907-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 52716 52856 . + . utg1966_pilon exonerate:protein2genome:local exon 52716 52856 . + . insertions 3 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 52716 52856 108 + . alignment_id 0 ; Query GL50803_135907-t26_1-p1 ; Align 52716 1 36 ; Align 52755 13 102 utg1966_pilon exonerate:protein2genome:local gene 52716 52856 108 + . gene_id 0 ; sequence GL50803_135908-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 52716 52856 . + . utg1966_pilon exonerate:protein2genome:local exon 52716 52856 . + . insertions 3 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 52716 52856 108 + . alignment_id 0 ; Query GL50803_135908-t26_1-p1 ; Align 52716 1 36 ; Align 52755 13 102 utg265_pilon exonerate:protein2genome:local gene 556508 590654 350 + . gene_id 0 ; sequence GL50803_135918-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 556508 556627 . + . utg265_pilon exonerate:protein2genome:local exon 556508 556627 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 556628 556629 . + . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 556628 590486 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 590485 590486 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 590487 590654 . + . utg265_pilon exonerate:protein2genome:local exon 590487 590654 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 556508 590654 350 + . alignment_id 0 ; Query GL50803_135918-t26_1-p1 ; Align 556508 1 120 ; Align 590487 41 168 utg265_pilon exonerate:protein2genome:local gene 556508 590654 350 + . gene_id 0 ; sequence GL50803_135919-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 556508 556627 . + . utg265_pilon exonerate:protein2genome:local exon 556508 556627 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 556628 556629 . + . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 556628 590486 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 590485 590486 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 590487 590654 . + . utg265_pilon exonerate:protein2genome:local exon 590487 590654 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 556508 590654 350 + . alignment_id 0 ; Query GL50803_135919-t26_1-p1 ; Align 556508 1 120 ; Align 590487 41 168 utg11_pilon exonerate:protein2genome:local gene 649081 649275 283 - . gene_id 0 ; sequence GL50803_135930-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 649081 649275 . - . utg11_pilon exonerate:protein2genome:local exon 649081 649275 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 649081 649275 283 - . alignment_id 0 ; Query GL50803_135930-t26_1-p1 ; Align 649276 1 195 utg212_pilon exonerate:protein2genome:local gene 405614 405808 283 + . gene_id 0 ; sequence GL50803_135930-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 405614 405808 . + . utg212_pilon exonerate:protein2genome:local exon 405614 405808 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 405614 405808 283 + . alignment_id 0 ; Query GL50803_135930-t26_1-p1 ; Align 405614 1 195 utg265_pilon exonerate:protein2genome:local gene 336589 336783 283 + . gene_id 0 ; sequence GL50803_135930-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 336589 336783 . + . utg265_pilon exonerate:protein2genome:local exon 336589 336783 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 336589 336783 283 + . alignment_id 0 ; Query GL50803_135930-t26_1-p1 ; Align 336589 1 195 utg11_pilon exonerate:protein2genome:local gene 649081 649275 283 - . gene_id 0 ; sequence GL50803_135931-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 649081 649275 . - . utg11_pilon exonerate:protein2genome:local exon 649081 649275 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 649081 649275 283 - . alignment_id 0 ; Query GL50803_135931-t26_1-p1 ; Align 649276 1 195 utg212_pilon exonerate:protein2genome:local gene 405614 405808 283 + . gene_id 0 ; sequence GL50803_135931-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 405614 405808 . + . utg212_pilon exonerate:protein2genome:local exon 405614 405808 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 405614 405808 283 + . alignment_id 0 ; Query GL50803_135931-t26_1-p1 ; Align 405614 1 195 utg265_pilon exonerate:protein2genome:local gene 336589 336783 283 + . gene_id 0 ; sequence GL50803_135931-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 336589 336783 . + . utg265_pilon exonerate:protein2genome:local exon 336589 336783 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 336589 336783 283 + . alignment_id 0 ; Query GL50803_135931-t26_1-p1 ; Align 336589 1 195 utg47_pilon exonerate:protein2genome:local gene 1917478 1917639 101 + . gene_id 0 ; sequence GL50803_135947-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1917478 1917639 . + . utg47_pilon exonerate:protein2genome:local exon 1917478 1917639 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1917478 1917639 101 + . alignment_id 0 ; Query GL50803_135947-t26_1-p1 ; Align 1917478 1 36 ; Align 1917517 13 18 ; Align 1917538 19 102 utg47_pilon exonerate:protein2genome:local gene 1917478 1917639 101 + . gene_id 0 ; sequence GL50803_135948-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1917478 1917639 . + . utg47_pilon exonerate:protein2genome:local exon 1917478 1917639 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1917478 1917639 101 + . alignment_id 0 ; Query GL50803_135948-t26_1-p1 ; Align 1917478 1 36 ; Align 1917517 13 18 ; Align 1917538 19 102 utg731_pilon exonerate:protein2genome:local gene 300273 300419 133 + . gene_id 0 ; sequence GL50803_135965-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 300273 300419 . + . utg731_pilon exonerate:protein2genome:local exon 300273 300419 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 300273 300419 133 + . alignment_id 0 ; Query GL50803_135965-t26_1-p1 ; Align 300273 11 147 utg731_pilon exonerate:protein2genome:local gene 322311 322457 133 - . gene_id 0 ; sequence GL50803_135965-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 322311 322457 . - . utg731_pilon exonerate:protein2genome:local exon 322311 322457 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 322311 322457 133 - . alignment_id 0 ; Query GL50803_135965-t26_1-p1 ; Align 322458 11 147 utg731_pilon exonerate:protein2genome:local gene 300273 300419 133 + . gene_id 0 ; sequence GL50803_135966-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 300273 300419 . + . utg731_pilon exonerate:protein2genome:local exon 300273 300419 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 300273 300419 133 + . alignment_id 0 ; Query GL50803_135966-t26_1-p1 ; Align 300273 11 147 utg731_pilon exonerate:protein2genome:local gene 322311 322457 133 - . gene_id 0 ; sequence GL50803_135966-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 322311 322457 . - . utg731_pilon exonerate:protein2genome:local exon 322311 322457 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 322311 322457 133 - . alignment_id 0 ; Query GL50803_135966-t26_1-p1 ; Align 322458 11 147 utg18_pilon exonerate:protein2genome:local gene 130905 131186 371 + . gene_id 0 ; sequence GL50803_135970-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 130905 131186 . + . utg18_pilon exonerate:protein2genome:local exon 130905 131186 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 130905 131186 371 + . alignment_id 0 ; Query GL50803_135970-t26_1-p1 ; Align 130905 1 282 utg18_pilon exonerate:protein2genome:local gene 92161 92442 371 - . gene_id 0 ; sequence GL50803_135970-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 92161 92442 . - . utg18_pilon exonerate:protein2genome:local exon 92161 92442 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 92161 92442 371 - . alignment_id 0 ; Query GL50803_135970-t26_1-p1 ; Align 92443 1 282 utg349_pilon exonerate:protein2genome:local gene 1400509 1400685 292 + . gene_id 0 ; sequence GL50803_135999-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1400509 1400685 . + . utg349_pilon exonerate:protein2genome:local exon 1400509 1400685 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1400509 1400685 292 + . alignment_id 0 ; Query GL50803_135999-t26_1-p1 ; Align 1400509 1 177 utg64_pilon exonerate:protein2genome:local gene 766741 841903 461 - . gene_id 0 ; sequence GL50803_136001-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 841666 841903 . - . utg64_pilon exonerate:protein2genome:local exon 841666 841903 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 841664 841665 . - . intron_id 1 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 766884 841665 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 766884 766885 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 766741 766883 . - . utg64_pilon exonerate:protein2genome:local exon 766741 766883 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 766741 841903 461 - . alignment_id 0 ; Query GL50803_136001-t26_1-p1 ; Align 841904 3 198 ; Align 841703 69 36 ; Align 766882 82 141 utg64_pilon exonerate:protein2genome:local gene 766741 841903 461 - . gene_id 0 ; sequence GL50803_136002-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 841666 841903 . - . utg64_pilon exonerate:protein2genome:local exon 841666 841903 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 841664 841665 . - . intron_id 1 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 766884 841665 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 766884 766885 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 766741 766883 . - . utg64_pilon exonerate:protein2genome:local exon 766741 766883 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 766741 841903 461 - . alignment_id 0 ; Query GL50803_136002-t26_1-p1 ; Align 841904 3 198 ; Align 841703 69 36 ; Align 766882 82 141 utg265_pilon exonerate:protein2genome:local gene 584239 818751 1629 - . gene_id 0 ; sequence GL50803_136003-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 818494 818751 . - . utg265_pilon exonerate:protein2genome:local exon 818494 818751 . - . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local splice5 818492 818493 . - . intron_id 1 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local intron 771860 818493 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 771860 771861 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 771613 771859 . - . utg265_pilon exonerate:protein2genome:local exon 771613 771859 . - . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 771611 771612 . - . intron_id 2 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 771359 771612 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 771359 771360 . - . intron_id 1 ; splice_site "AA" utg265_pilon exonerate:protein2genome:local cds 770344 771358 . - . utg265_pilon exonerate:protein2genome:local exon 770344 771358 . - . insertions 0 ; deletions 5 ; frameshifts 3 utg265_pilon exonerate:protein2genome:local splice5 770342 770343 . - . intron_id 3 ; splice_site "TG" utg265_pilon exonerate:protein2genome:local intron 584357 770343 . - . intron_id 3 utg265_pilon exonerate:protein2genome:local splice3 584357 584358 . - . intron_id 2 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 584239 584356 . - . utg265_pilon exonerate:protein2genome:local exon 584239 584356 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 584239 818751 1629 - . alignment_id 0 ; Query GL50803_136003-t26_1-p1 ; Align 818752 2 54 ; Align 818698 21 150 ; Align 818548 72 54 ; Align 771860 90 108 ; Align 771746 126 132 ; Align 771357 171 111 ; Align 771246 210 387 ; Align 770857 339 174 ; Align 770682 397 27 ; Align 770655 407 246 ; Align 770409 491 63 ; Align 584356 513 117 utg265_pilon exonerate:protein2genome:local gene 584239 818751 1629 - . gene_id 0 ; sequence GL50803_136004-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 818494 818751 . - . utg265_pilon exonerate:protein2genome:local exon 818494 818751 . - . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local splice5 818492 818493 . - . intron_id 1 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local intron 771860 818493 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 771860 771861 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 771613 771859 . - . utg265_pilon exonerate:protein2genome:local exon 771613 771859 . - . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 771611 771612 . - . intron_id 2 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 771359 771612 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 771359 771360 . - . intron_id 1 ; splice_site "AA" utg265_pilon exonerate:protein2genome:local cds 770344 771358 . - . utg265_pilon exonerate:protein2genome:local exon 770344 771358 . - . insertions 0 ; deletions 5 ; frameshifts 3 utg265_pilon exonerate:protein2genome:local splice5 770342 770343 . - . intron_id 3 ; splice_site "TG" utg265_pilon exonerate:protein2genome:local intron 584357 770343 . - . intron_id 3 utg265_pilon exonerate:protein2genome:local splice3 584357 584358 . - . intron_id 2 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 584239 584356 . - . utg265_pilon exonerate:protein2genome:local exon 584239 584356 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 584239 818751 1629 - . alignment_id 0 ; Query GL50803_136004-t26_1-p1 ; Align 818752 2 54 ; Align 818698 21 150 ; Align 818548 72 54 ; Align 771860 90 108 ; Align 771746 126 132 ; Align 771357 171 111 ; Align 771246 210 387 ; Align 770857 339 174 ; Align 770682 397 27 ; Align 770655 407 246 ; Align 770409 491 63 ; Align 584356 513 117 utg18_pilon exonerate:protein2genome:local gene 152629 153374 695 + . gene_id 0 ; sequence GL50803_13601-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 152629 153374 . + . utg18_pilon exonerate:protein2genome:local exon 152629 153374 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local similarity 152629 153374 695 + . alignment_id 0 ; Query GL50803_13601-t26_1-p1 ; Align 152629 2 78 ; Align 152709 29 24 ; Align 152733 38 642 utg265_pilon exonerate:protein2genome:local gene 20538 21878 2372 + . gene_id 0 ; sequence GL50803_136020-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 20538 21878 . + . utg265_pilon exonerate:protein2genome:local exon 20538 21878 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 20538 21878 2372 + . alignment_id 0 ; Query GL50803_136020-t26_1-p1 ; Align 20538 1 1341 utg265_pilon exonerate:protein2genome:local gene 20538 21878 2372 + . gene_id 0 ; sequence GL50803_136021-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 20538 21878 . + . utg265_pilon exonerate:protein2genome:local exon 20538 21878 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 20538 21878 2372 + . alignment_id 0 ; Query GL50803_136021-t26_1-p1 ; Align 20538 1 1341 utg349_pilon exonerate:protein2genome:local gene 375336 375956 875 + . gene_id 0 ; sequence GL50803_13603-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 375336 375956 . + . utg349_pilon exonerate:protein2genome:local exon 375336 375956 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 375336 375956 875 + . alignment_id 0 ; Query GL50803_13603-t26_1-p1 ; Align 375336 1 621 utg349_pilon exonerate:protein2genome:local gene 371304 373730 2654 - . gene_id 0 ; sequence GL50803_13604-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 373317 373730 . - . utg349_pilon exonerate:protein2genome:local exon 373317 373730 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 373315 373316 . - . intron_id 1 ; splice_site "CT" utg349_pilon exonerate:protein2genome:local intron 373287 373316 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 373287 373288 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 372882 373286 . - . utg349_pilon exonerate:protein2genome:local exon 372882 373286 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 372880 372881 . - . intron_id 2 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local intron 372828 372881 . - . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 372828 372829 . - . intron_id 1 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 371304 372827 . - . utg349_pilon exonerate:protein2genome:local exon 371304 372827 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 371304 373730 2654 - . alignment_id 0 ; Query GL50803_13604-t26_1-p1 ; Align 373731 224 414 ; Align 373287 362 9 ; Align 373278 366 396 ; Align 372828 498 1524 utg731_pilon exonerate:protein2genome:local gene 1190345 1192045 2762 + . gene_id 0 ; sequence GL50803_13606-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1190345 1192045 . + . utg731_pilon exonerate:protein2genome:local exon 1190345 1192045 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1190345 1192045 2762 + . alignment_id 0 ; Query GL50803_13606-t26_1-p1 ; Align 1190345 1 1701 utg731_pilon exonerate:protein2genome:local gene 210134 212305 3504 + . gene_id 0 ; sequence GL50803_13608-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 210134 212305 . + . utg731_pilon exonerate:protein2genome:local exon 210134 212305 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 210134 212305 3504 + . alignment_id 0 ; Query GL50803_13608-t26_1-p1 ; Align 210134 3 2172 utg212_pilon exonerate:protein2genome:local gene 272523 273953 2209 + . gene_id 0 ; sequence GL50803_13616-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 272523 273953 . + . utg212_pilon exonerate:protein2genome:local exon 272523 273953 . + . insertions 0 ; deletions 6 utg212_pilon exonerate:protein2genome:local similarity 272523 273953 2209 + . alignment_id 0 ; Query GL50803_13616-t26_1-p1 ; Align 272523 1 915 ; Align 273438 310 474 ; Align 273912 470 42 utg308_pilon exonerate:protein2genome:local gene 791570 792220 958 - . gene_id 0 ; sequence GL50803_13622-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 791570 792220 . - . utg308_pilon exonerate:protein2genome:local exon 791570 792220 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 791570 792220 958 - . alignment_id 0 ; Query GL50803_13622-t26_1-p1 ; Align 792221 1 651 utg349_pilon exonerate:protein2genome:local gene 1594877 1596076 1498 - . gene_id 0 ; sequence GL50803_13636-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1594877 1596076 . - . utg349_pilon exonerate:protein2genome:local exon 1594877 1596076 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 1594877 1596076 1498 - . alignment_id 0 ; Query GL50803_13636-t26_1-p1 ; Align 1596077 1 633 ; Align 1595444 214 264 ; Align 1595180 303 303 utg64_pilon exonerate:protein2genome:local gene 661460 663508 3038 + . gene_id 0 ; sequence GL50803_13651-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 661460 663508 . + . utg64_pilon exonerate:protein2genome:local exon 661460 663508 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 661460 663508 3038 + . alignment_id 0 ; Query GL50803_13651-t26_1-p1 ; Align 661460 13 2049 utg265_pilon exonerate:protein2genome:local gene 913230 913712 818 + . gene_id 0 ; sequence GL50803_13652-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 913230 913712 . + . utg265_pilon exonerate:protein2genome:local exon 913230 913712 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 913230 913712 818 + . alignment_id 0 ; Query GL50803_13652-t26_1-p1 ; Align 913230 1 483 utg265_pilon exonerate:protein2genome:local gene 911974 913233 1377 - . gene_id 0 ; sequence GL50803_13653-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 911974 913233 . - . utg265_pilon exonerate:protein2genome:local exon 911974 913233 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 911974 913233 1377 - . alignment_id 0 ; Query GL50803_13653-t26_1-p1 ; Align 913234 7 18 ; Align 913216 14 1242 utg212_pilon exonerate:protein2genome:local gene 72259 73306 1271 + . gene_id 0 ; sequence GL50803_13661-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 72259 73306 . + . utg212_pilon exonerate:protein2genome:local exon 72259 73306 . + . insertions 0 ; deletions 2 ; frameshifts 4 utg212_pilon exonerate:protein2genome:local similarity 72259 73306 1271 + . alignment_id 0 ; Query GL50803_13661-t26_1-p1 ; Align 72259 1 54 ; Align 72314 20 351 ; Align 72667 137 6 ; Align 72673 140 225 ; Align 72899 215 408 utg11_pilon exonerate:protein2genome:local gene 1457860 1459395 2520 + . gene_id 0 ; sequence GL50803_13667-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1457860 1459395 . + . utg11_pilon exonerate:protein2genome:local exon 1457860 1459395 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1457860 1459395 2520 + . alignment_id 0 ; Query GL50803_13667-t26_1-p1 ; Align 1457860 1 1536 utg11_pilon exonerate:protein2genome:local gene 1448155 1448919 942 + . gene_id 0 ; sequence GL50803_13668-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1448155 1448919 . + . utg11_pilon exonerate:protein2genome:local exon 1448155 1448919 . + . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 1448155 1448919 942 + . alignment_id 0 ; Query GL50803_13668-t26_1-p1 ; Align 1448155 1 414 ; Align 1448569 142 351 utg731_pilon exonerate:protein2genome:local gene 1401444 1404379 3366 + . gene_id 0 ; sequence GL50803_13671-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1401444 1404379 . + . utg731_pilon exonerate:protein2genome:local exon 1401444 1404379 . + . insertions 0 ; deletions 3 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 1401444 1404379 3366 + . alignment_id 0 ; Query GL50803_13671-t26_1-p1 ; Align 1401444 174 339 ; Align 1401783 289 801 ; Align 1402585 557 792 ; Align 1403378 821 1002 utg731_pilon exonerate:protein2genome:local gene 1398944 1399612 867 + . gene_id 0 ; sequence GL50803_13672-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1398944 1399612 . + . utg731_pilon exonerate:protein2genome:local exon 1398944 1399612 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1398944 1399612 867 + . alignment_id 0 ; Query GL50803_13672-t26_1-p1 ; Align 1398944 5 669 utg349_pilon exonerate:protein2genome:local gene 332927 333172 322 - . gene_id 0 ; sequence GL50803_13690-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 332927 333172 . - . utg349_pilon exonerate:protein2genome:local exon 332927 333172 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 332927 333172 322 - . alignment_id 0 ; Query GL50803_13690-t26_1-p1 ; Align 333173 131 246 utg349_pilon exonerate:protein2genome:local gene 331538 332896 1936 + . gene_id 0 ; sequence GL50803_13691-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 331538 332896 . + . utg349_pilon exonerate:protein2genome:local exon 331538 332896 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 331538 332896 1936 + . alignment_id 0 ; Query GL50803_13691-t26_1-p1 ; Align 331538 1 1359 utg349_pilon exonerate:protein2genome:local gene 327270 327986 1062 + . gene_id 0 ; sequence GL50803_13694-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 327270 327986 . + . utg349_pilon exonerate:protein2genome:local exon 327270 327986 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 327270 327986 1062 + . alignment_id 0 ; Query GL50803_13694-t26_1-p1 ; Align 327270 1 717 utg308_pilon exonerate:protein2genome:local gene 537648 538187 898 - . gene_id 0 ; sequence GL50803_13699-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 537648 538187 . - . utg308_pilon exonerate:protein2genome:local exon 537648 538187 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 537648 538187 898 - . alignment_id 0 ; Query GL50803_13699-t26_1-p1 ; Align 538188 4 540 utg265_pilon exonerate:protein2genome:local gene 668760 668945 119 + . gene_id 0 ; sequence GL50803_1370-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 668760 668945 . + . utg265_pilon exonerate:protein2genome:local exon 668760 668945 . + . insertions 12 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 668760 668945 119 + . alignment_id 0 ; Query GL50803_1370-t26_1-p1 ; Align 668760 1 96 ; Align 668868 33 78 utg308_pilon exonerate:protein2genome:local gene 534128 537457 4187 - . gene_id 0 ; sequence GL50803_13700-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 534128 537457 . - . utg308_pilon exonerate:protein2genome:local exon 534128 537457 . - . insertions 3 ; deletions 6 ; frameshifts 6 utg308_pilon exonerate:protein2genome:local similarity 534128 537457 4187 - . alignment_id 0 ; Query GL50803_13700-t26_1-p1 ; Align 537458 1 282 ; Align 537174 95 489 ; Align 536685 262 405 ; Align 536278 397 9 ; Align 536269 401 69 ; Align 536199 424 123 ; Align 536075 466 993 ; Align 535079 797 951 utg308_pilon exonerate:protein2genome:local gene 948666 956191 9980 - . gene_id 0 ; sequence GL50803_13708-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 948666 956191 . - . utg308_pilon exonerate:protein2genome:local exon 948666 956191 . - . insertions 0 ; deletions 3 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 948666 956191 9980 - . alignment_id 0 ; Query GL50803_13708-t26_1-p1 ; Align 956192 16 333 ; Align 955859 128 18 ; Align 955841 135 6489 ; Align 949352 2299 6 ; Align 949344 2301 678 utg64_pilon exonerate:protein2genome:local gene 860986 862569 1817 - . gene_id 0 ; sequence GL50803_13720-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 860986 862569 . - . utg64_pilon exonerate:protein2genome:local exon 860986 862569 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 860986 862569 1817 - . alignment_id 0 ; Query GL50803_13720-t26_1-p1 ; Align 862570 1 945 ; Align 861625 317 639 utg11_pilon exonerate:protein2genome:local gene 1454347 1546399 1553 + . gene_id 0 ; sequence GL50803_13727-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1454347 1454806 . + . utg11_pilon exonerate:protein2genome:local exon 1454347 1454806 . + . insertions 12 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1454807 1454808 . + . intron_id 1 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 1454807 1538439 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1538438 1538439 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1538440 1538529 . + . utg11_pilon exonerate:protein2genome:local exon 1538440 1538529 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1538530 1538531 . + . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1538530 1545377 . + . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 1545376 1545377 . + . intron_id 1 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1545378 1546399 . + . utg11_pilon exonerate:protein2genome:local exon 1545378 1546399 . + . insertions 15 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1454347 1546399 1553 + . alignment_id 0 ; Query GL50803_13727-t26_1-p1 ; Align 1454347 24 291 ; Align 1454644 121 18 ; Align 1454668 127 138 ; Align 1538442 174 87 ; Align 1545380 204 474 ; Align 1545857 362 66 ; Align 1545926 384 63 ; Align 1545992 405 105 ; Align 1546097 442 171 ; Align 1546274 499 126 utg18_pilon exonerate:protein2genome:local gene 86291 325768 748 - . gene_id 0 ; sequence GL50803_13728-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 325573 325768 . - . utg18_pilon exonerate:protein2genome:local exon 325573 325768 . - . insertions 0 ; deletions 1 utg18_pilon exonerate:protein2genome:local splice5 325571 325572 . - . intron_id 1 ; splice_site "CT" utg18_pilon exonerate:protein2genome:local intron 256972 325572 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 256972 256973 . - . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 256594 256971 . - . utg18_pilon exonerate:protein2genome:local exon 256594 256971 . - . insertions 3 ; deletions 2 utg18_pilon exonerate:protein2genome:local splice5 256592 256593 . - . intron_id 2 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 177764 256593 . - . intron_id 2 utg18_pilon exonerate:protein2genome:local splice3 177764 177765 . - . intron_id 1 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 177653 177763 . - . utg18_pilon exonerate:protein2genome:local exon 177653 177763 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 177651 177652 . - . intron_id 3 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 86353 177652 . - . intron_id 3 utg18_pilon exonerate:protein2genome:local splice3 86353 86354 . - . intron_id 2 ; splice_site "GG" utg18_pilon exonerate:protein2genome:local cds 86291 86352 . - . utg18_pilon exonerate:protein2genome:local exon 86291 86352 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 86291 325768 748 - . alignment_id 0 ; Query GL50803_13728-t26_1-p1 ; Align 325769 2 24 ; Align 325745 11 171 ; Align 256970 69 78 ; Align 256892 97 198 ; Align 256691 163 96 ; Align 177762 196 108 ; Align 86351 233 60 utg11_pilon exonerate:protein2genome:local gene 252269 254824 3270 + . gene_id 0 ; sequence GL50803_13735-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 252269 254824 . + . utg11_pilon exonerate:protein2genome:local exon 252269 254824 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 252269 254824 3270 + . alignment_id 0 ; Query GL50803_13735-t26_1-p1 ; Align 252269 253 2556 utg308_pilon exonerate:protein2genome:local gene 349553 351994 3292 - . gene_id 0 ; sequence GL50803_13737-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 349553 351994 . - . utg308_pilon exonerate:protein2genome:local exon 349553 351994 . - . insertions 6 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 349553 351994 3292 - . alignment_id 0 ; Query GL50803_13737-t26_1-p1 ; Align 351995 1 336 ; Align 351659 115 1875 ; Align 349778 740 225 utg308_pilon exonerate:protein2genome:local gene 678775 679368 762 - . gene_id 0 ; sequence GL50803_13747-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 678775 679368 . - . utg308_pilon exonerate:protein2genome:local exon 678775 679368 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 678775 679368 762 - . alignment_id 0 ; Query GL50803_13747-t26_1-p1 ; Align 679369 1 594 utg308_pilon exonerate:protein2genome:local gene 671808 673661 2814 + . gene_id 0 ; sequence GL50803_13749-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 671808 673661 . + . utg308_pilon exonerate:protein2genome:local exon 671808 673661 . + . insertions 0 ; deletions 5 utg308_pilon exonerate:protein2genome:local similarity 671808 673661 2814 + . alignment_id 0 ; Query GL50803_13749-t26_1-p1 ; Align 671808 47 906 ; Align 672714 353 30 ; Align 672744 364 918 utg308_pilon exonerate:protein2genome:local gene 423706 424326 1058 + . gene_id 0 ; sequence GL50803_13756-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 423706 424326 . + . utg308_pilon exonerate:protein2genome:local exon 423706 424326 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 423706 424326 1058 + . alignment_id 0 ; Query GL50803_13756-t26_1-p1 ; Align 423706 1 621 utg11_pilon exonerate:protein2genome:local gene 543492 544013 641 - . gene_id 0 ; sequence GL50803_1376-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 543492 544013 . - . utg11_pilon exonerate:protein2genome:local exon 543492 544013 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 543492 544013 641 - . alignment_id 0 ; Query GL50803_1376-t26_1-p1 ; Align 544014 5 522 utg47_pilon exonerate:protein2genome:local gene 319588 320982 2159 - . gene_id 0 ; sequence GL50803_137603-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 319588 320982 . - . utg47_pilon exonerate:protein2genome:local exon 319588 320982 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 319588 320982 2159 - . alignment_id 0 ; Query GL50803_137603-t26_1-p1 ; Align 320983 1 1395 utg349_pilon exonerate:protein2genome:local gene 1448957 1638874 1774 + . gene_id 0 ; sequence GL50803_137604-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1448957 1449302 . + . utg349_pilon exonerate:protein2genome:local exon 1448957 1449302 . + . insertions 6 ; deletions 3 utg349_pilon exonerate:protein2genome:local splice5 1449303 1449304 . + . intron_id 1 ; splice_site "TT" utg349_pilon exonerate:protein2genome:local intron 1449303 1635710 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1635709 1635710 . + . intron_id 0 ; splice_site "TG" utg349_pilon exonerate:protein2genome:local cds 1635711 1635900 . + . utg349_pilon exonerate:protein2genome:local exon 1635711 1635900 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1635901 1635902 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1635901 1636383 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1636382 1636383 . + . intron_id 1 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local cds 1636384 1637625 . + . utg349_pilon exonerate:protein2genome:local exon 1636384 1637625 . + . insertions 27 ; deletions 5 utg349_pilon exonerate:protein2genome:local splice5 1637626 1637627 . + . intron_id 3 ; splice_site "CT" utg349_pilon exonerate:protein2genome:local intron 1637626 1638744 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 1638743 1638744 . + . intron_id 2 ; splice_site "CG" utg349_pilon exonerate:protein2genome:local cds 1638745 1638874 . + . utg349_pilon exonerate:protein2genome:local exon 1638745 1638874 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1448957 1638874 1774 + . alignment_id 0 ; Query GL50803_137604-t26_1-p1 ; Align 1448957 72 57 ; Align 1449014 93 9 ; Align 1449023 97 57 ; Align 1449083 116 102 ; Align 1449188 150 114 ; Align 1635713 189 42 ; Align 1635755 204 144 ; Align 1636385 253 42 ; Align 1636427 269 72 ; Align 1636502 293 66 ; Align 1636568 316 54 ; Align 1636625 334 114 ; Align 1636742 372 126 ; Align 1636868 415 105 ; Align 1636976 450 54 ; Align 1637033 468 159 ; Align 1637198 521 30 ; Align 1637231 531 156 ; Align 1637390 583 177 ; Align 1637567 643 57 ; Align 1638746 663 129 utg11_pilon exonerate:protein2genome:local gene 862350 1019009 1203 + . gene_id 0 ; sequence GL50803_137605-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 862350 863334 . + . utg11_pilon exonerate:protein2genome:local exon 862350 863334 . + . insertions 0 ; deletions 7 utg11_pilon exonerate:protein2genome:local splice5 863335 863336 . + . intron_id 1 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 863335 1018872 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1018871 1018872 . + . intron_id 0 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 1018873 1019009 . + . utg11_pilon exonerate:protein2genome:local exon 1018873 1019009 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 862350 1019009 1203 + . alignment_id 0 ; Query GL50803_137605-t26_1-p1 ; Align 862350 65 51 ; Align 862401 83 90 ; Align 862491 114 369 ; Align 862860 239 378 ; Align 863238 368 96 ; Align 1018875 401 135 utg64_pilon exonerate:protein2genome:local gene 766741 1026703 1827 - . gene_id 0 ; sequence GL50803_137606-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 1026229 1026703 . - . utg64_pilon exonerate:protein2genome:local exon 1026229 1026703 . - . insertions 18 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 1026227 1026228 . - . intron_id 1 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local intron 846818 1026228 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 846818 846819 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 846339 846817 . - . utg64_pilon exonerate:protein2genome:local exon 846339 846817 . - . insertions 12 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 846337 846338 . - . intron_id 2 ; splice_site "AA" utg64_pilon exonerate:protein2genome:local intron 833387 846338 . - . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 833387 833388 . - . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 832316 833386 . - . utg64_pilon exonerate:protein2genome:local exon 832316 833386 . - . insertions 0 ; deletions 10 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local splice5 832314 832315 . - . intron_id 3 ; splice_site "CG" utg64_pilon exonerate:protein2genome:local intron 766859 832315 . - . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 766859 766860 . - . intron_id 2 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 766741 766858 . - . utg64_pilon exonerate:protein2genome:local exon 766741 766858 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 766741 1026703 1827 - . alignment_id 0 ; Query GL50803_137606-t26_1-p1 ; Align 1026704 137 57 ; Align 1026647 157 213 ; Align 1026428 228 24 ; Align 1026398 236 93 ; Align 1026299 267 69 ; Align 846816 291 54 ; Align 846762 310 72 ; Align 846687 334 48 ; Align 846636 350 36 ; Align 846597 362 162 ; Align 846432 416 93 ; Align 833387 447 174 ; Align 833212 505 156 ; Align 833056 559 102 ; Align 832954 596 171 ; Align 832783 654 264 ; Align 832519 744 51 ; Align 832468 762 66 ; Align 832402 785 84 ; Align 766858 814 117 utg349_pilon exonerate:protein2genome:local gene 1101716 1435690 1308 + . gene_id 0 ; sequence GL50803_137607-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1101716 1101975 . + . utg349_pilon exonerate:protein2genome:local exon 1101716 1101975 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1101976 1101977 . + . intron_id 1 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 1101976 1239080 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1239079 1239080 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1239081 1239946 . + . utg349_pilon exonerate:protein2genome:local exon 1239081 1239946 . + . insertions 0 ; deletions 7 utg349_pilon exonerate:protein2genome:local splice5 1239947 1239948 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1239947 1435565 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1435564 1435565 . + . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 1435566 1435690 . + . utg349_pilon exonerate:protein2genome:local exon 1435566 1435690 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1101716 1435690 1308 + . alignment_id 0 ; Query GL50803_137607-t26_1-p1 ; Align 1101716 2 210 ; Align 1101926 73 48 ; Align 1239082 90 129 ; Align 1239211 134 303 ; Align 1239514 237 93 ; Align 1239607 272 339 ; Align 1435568 386 6 ; Align 1435574 389 117 utg212_pilon exonerate:protein2genome:local gene 11541 254926 1047 + . gene_id 0 ; sequence GL50803_137608-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 11541 12255 . + . utg212_pilon exonerate:protein2genome:local exon 11541 12255 . + . insertions 18 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 12256 12257 . + . intron_id 1 ; splice_site "GT" utg212_pilon exonerate:protein2genome:local intron 12256 107219 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 107218 107219 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 107220 107256 . + . utg212_pilon exonerate:protein2genome:local exon 107220 107256 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 107257 107258 . + . intron_id 2 ; splice_site "GT" utg212_pilon exonerate:protein2genome:local intron 107257 254385 . + . intron_id 2 utg212_pilon exonerate:protein2genome:local splice3 254384 254385 . + . intron_id 1 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 254386 254926 . + . utg212_pilon exonerate:protein2genome:local exon 254386 254926 . + . insertions 9 ; deletions 2 utg212_pilon exonerate:protein2genome:local similarity 11541 254926 1047 + . alignment_id 0 ; Query GL50803_137608-t26_1-p1 ; Align 11541 130 246 ; Align 11790 212 60 ; Align 11853 232 78 ; Align 11934 258 66 ; Align 12006 280 111 ; Align 12120 317 135 ; Align 107222 363 33 ; Align 254387 375 162 ; Align 254552 429 117 ; Align 254672 468 81 ; Align 254756 495 33 ; Align 254789 508 138 utg11_pilon exonerate:protein2genome:local gene 163062 163748 1126 + . gene_id 0 ; sequence GL50803_137609-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 163062 163748 . + . utg11_pilon exonerate:protein2genome:local exon 163062 163748 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 163062 163748 1126 + . alignment_id 0 ; Query GL50803_137609-t26_1-p1 ; Align 163062 1 687 utg47_pilon exonerate:protein2genome:local gene 176460 869279 1720 + . gene_id 0 ; sequence GL50803_137610-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 176460 176724 . + . utg47_pilon exonerate:protein2genome:local exon 176460 176724 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 176725 176726 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 176725 334972 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 334971 334972 . + . intron_id 0 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 334973 335425 . + . utg47_pilon exonerate:protein2genome:local exon 334973 335425 . + . insertions 15 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 335426 335427 . + . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 335426 390809 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 390808 390809 . + . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 390810 390897 . + . utg47_pilon exonerate:protein2genome:local exon 390810 390897 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 390898 390899 . + . intron_id 3 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local intron 390898 529103 . + . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 529102 529103 . + . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 529104 529852 . + . utg47_pilon exonerate:protein2genome:local exon 529104 529852 . + . insertions 3 ; deletions 4 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local splice5 529853 529854 . + . intron_id 4 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 529853 718673 . + . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 718672 718673 . + . intron_id 3 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 718674 718766 . + . utg47_pilon exonerate:protein2genome:local exon 718674 718766 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 718767 718768 . + . intron_id 5 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 718767 825417 . + . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 825416 825417 . + . intron_id 4 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 825418 825532 . + . utg47_pilon exonerate:protein2genome:local exon 825418 825532 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 825533 825534 . + . intron_id 6 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 825533 869136 . + . intron_id 6 utg47_pilon exonerate:protein2genome:local splice3 869135 869136 . + . intron_id 5 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 869137 869279 . + . utg47_pilon exonerate:protein2genome:local exon 869137 869279 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 176460 869279 1720 + . alignment_id 0 ; Query GL50803_137610-t26_1-p1 ; Align 176460 6 42 ; Align 176502 21 222 ; Align 334975 96 45 ; Align 335026 111 120 ; Align 335152 151 63 ; Align 335215 173 84 ; Align 335299 202 75 ; Align 335377 227 48 ; Align 390812 244 84 ; Align 529105 273 72 ; Align 529178 297 21 ; Align 529202 304 123 ; Align 529325 349 528 ; Align 718674 525 93 ; Align 825418 556 114 ; Align 869139 595 141 utg11_pilon exonerate:protein2genome:local gene 107976 398120 1096 + . gene_id 0 ; sequence GL50803_137611-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 107976 108721 . + . utg11_pilon exonerate:protein2genome:local exon 107976 108721 . + . insertions 12 ; deletions 3 utg11_pilon exonerate:protein2genome:local splice5 108722 108723 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 108722 220184 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 220183 220184 . + . intron_id 0 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local cds 220185 220303 . + . utg11_pilon exonerate:protein2genome:local exon 220185 220303 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 220304 220305 . + . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 220304 397965 . + . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 397964 397965 . + . intron_id 1 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 397966 398120 . + . utg11_pilon exonerate:protein2genome:local exon 397966 398120 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 107976 398120 1096 + . alignment_id 0 ; Query GL50803_137611-t26_1-p1 ; Align 107976 1 39 ; Align 108018 14 69 ; Align 108087 39 27 ; Align 108117 48 165 ; Align 108288 103 117 ; Align 108405 143 315 ; Align 220186 249 18 ; Align 220204 256 99 ; Align 397968 290 153 utg64_pilon exonerate:protein2genome:local gene 586958 1025734 1775 - . gene_id 0 ; sequence GL50803_137612-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 1025410 1025734 . - . utg64_pilon exonerate:protein2genome:local exon 1025410 1025734 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 1025408 1025409 . - . intron_id 1 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 846923 1025409 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 846923 846924 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 846414 846922 . - . utg64_pilon exonerate:protein2genome:local exon 846414 846922 . - . insertions 12 ; deletions 5 utg64_pilon exonerate:protein2genome:local splice5 846412 846413 . - . intron_id 2 ; splice_site "AC" utg64_pilon exonerate:protein2genome:local intron 833459 846413 . - . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 833459 833460 . - . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 832317 833458 . - . utg64_pilon exonerate:protein2genome:local exon 832317 833458 . - . insertions 12 ; deletions 4 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local splice5 832315 832316 . - . intron_id 3 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 766884 832316 . - . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 766884 766885 . - . intron_id 2 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 766874 766883 . - . utg64_pilon exonerate:protein2genome:local exon 766874 766883 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 766872 766873 . - . intron_id 4 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 587076 766873 . - . intron_id 4 utg64_pilon exonerate:protein2genome:local splice3 587076 587077 . - . intron_id 3 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 586958 587075 . - . utg64_pilon exonerate:protein2genome:local exon 586958 587075 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 586958 1025734 1775 - . alignment_id 0 ; Query GL50803_137612-t26_1-p1 ; Align 1025735 165 141 ; Align 1025591 212 180 ; Align 846921 273 15 ; Align 846906 279 141 ; Align 846765 327 81 ; Align 846681 354 42 ; Align 846636 368 36 ; Align 846597 380 18 ; Align 846576 386 45 ; Align 846531 403 21 ; Align 846510 411 96 ; Align 833459 443 54 ; Align 833399 461 186 ; Align 833212 523 156 ; Align 833056 577 102 ; Align 832951 611 420 ; Align 832528 751 114 ; Align 832414 791 96 ; Align 766882 824 6 ; Align 587075 827 117 utg11_pilon exonerate:protein2genome:local gene 909334 1063401 1095 - . gene_id 0 ; sequence GL50803_137613-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1063273 1063401 . - . utg11_pilon exonerate:protein2genome:local exon 1063273 1063401 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local splice5 1063271 1063272 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 939927 1063272 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 939927 939928 . - . intron_id 0 ; splice_site "TG" utg11_pilon exonerate:protein2genome:local cds 939111 939926 . - . utg11_pilon exonerate:protein2genome:local exon 939111 939926 . - . insertions 0 ; deletions 7 utg11_pilon exonerate:protein2genome:local splice5 939109 939110 . - . intron_id 2 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 909460 939110 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 909460 909461 . - . intron_id 1 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 909334 909459 . - . utg11_pilon exonerate:protein2genome:local exon 909334 909459 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 909334 1063401 1095 - . alignment_id 0 ; Query GL50803_137613-t26_1-p1 ; Align 1063402 29 84 ; Align 1063318 59 45 ; Align 939927 74 333 ; Align 939594 187 234 ; Align 939360 267 141 ; Align 939219 317 108 ; Align 909460 353 126 utg11_pilon exonerate:protein2genome:local gene 1454347 1636110 1539 + . gene_id 0 ; sequence GL50803_137614-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1454347 1454806 . + . utg11_pilon exonerate:protein2genome:local exon 1454347 1454806 . + . insertions 12 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1454807 1454808 . + . intron_id 1 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 1454807 1538439 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1538438 1538439 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1538440 1538529 . + . utg11_pilon exonerate:protein2genome:local exon 1538440 1538529 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1538530 1538531 . + . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1538530 1545377 . + . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 1545376 1545377 . + . intron_id 1 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1545378 1546282 . + . utg11_pilon exonerate:protein2genome:local exon 1545378 1546282 . + . insertions 9 ; deletions 2 utg11_pilon exonerate:protein2genome:local splice5 1546283 1546284 . + . intron_id 3 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1546283 1635975 . + . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 1635974 1635975 . + . intron_id 2 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1635976 1636110 . + . utg11_pilon exonerate:protein2genome:local exon 1635976 1636110 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1454347 1636110 1539 + . alignment_id 0 ; Query GL50803_137614-t26_1-p1 ; Align 1454347 24 291 ; Align 1454644 121 18 ; Align 1454668 127 138 ; Align 1538442 174 87 ; Align 1545380 204 474 ; Align 1545857 362 66 ; Align 1545926 384 63 ; Align 1545992 405 105 ; Align 1546097 442 186 ; Align 1635976 504 24 ; Align 1636003 512 108 utg64_pilon exonerate:protein2genome:local gene 586958 1026625 1914 - . gene_id 0 ; sequence GL50803_137617-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 1026277 1026625 . - . utg64_pilon exonerate:protein2genome:local exon 1026277 1026625 . - . insertions 15 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 1026275 1026276 . - . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 846866 1026276 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 846866 846867 . - . intron_id 0 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local cds 846339 846865 . - . utg64_pilon exonerate:protein2genome:local exon 846339 846865 . - . insertions 12 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 846337 846338 . - . intron_id 2 ; splice_site "AA" utg64_pilon exonerate:protein2genome:local intron 833387 846338 . - . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 833387 833388 . - . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 832317 833386 . - . utg64_pilon exonerate:protein2genome:local exon 832317 833386 . - . insertions 3 ; deletions 4 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local splice5 832315 832316 . - . intron_id 3 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 766884 832316 . - . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 766884 766885 . - . intron_id 2 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 766874 766883 . - . utg64_pilon exonerate:protein2genome:local exon 766874 766883 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 766872 766873 . - . intron_id 4 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 587076 766873 . - . intron_id 4 utg64_pilon exonerate:protein2genome:local splice3 587076 587077 . - . intron_id 3 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 586958 587075 . - . utg64_pilon exonerate:protein2genome:local exon 586958 587075 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 586958 1026625 1914 - . alignment_id 0 ; Query GL50803_137617-t26_1-p1 ; Align 1026626 49 207 ; Align 1026413 118 108 ; Align 1026296 154 18 ; Align 846864 161 102 ; Align 846762 196 78 ; Align 846681 222 42 ; Align 846636 236 27 ; Align 846606 245 171 ; Align 846432 302 93 ; Align 833387 333 174 ; Align 833212 391 156 ; Align 833056 445 525 ; Align 832528 620 114 ; Align 832414 660 96 ; Align 766882 693 6 ; Align 587075 696 117 utg349_pilon exonerate:protein2genome:local gene 497515 1640004 1819 + . gene_id 0 ; sequence GL50803_137618-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 497515 497584 . + . utg349_pilon exonerate:protein2genome:local exon 497515 497584 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 497585 497586 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 497585 649156 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 649155 649156 . + . intron_id 0 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local cds 649157 649231 . + . utg349_pilon exonerate:protein2genome:local exon 649157 649231 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 649232 649233 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 649232 835449 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 835448 835449 . + . intron_id 1 ; splice_site "TG" utg349_pilon exonerate:protein2genome:local cds 835450 835797 . + . utg349_pilon exonerate:protein2genome:local exon 835450 835797 . + . insertions 6 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 835798 835799 . + . intron_id 3 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 835798 839920 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 839919 839920 . + . intron_id 2 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 839921 840394 . + . utg349_pilon exonerate:protein2genome:local exon 839921 840394 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 840395 840396 . + . intron_id 4 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local intron 840395 967692 . + . intron_id 4 utg349_pilon exonerate:protein2genome:local splice3 967691 967692 . + . intron_id 3 ; splice_site "TG" utg349_pilon exonerate:protein2genome:local cds 967693 968248 . + . utg349_pilon exonerate:protein2genome:local exon 967693 968248 . + . insertions 3 ; deletions 6 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local splice5 968249 968250 . + . intron_id 5 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 968249 1100864 . + . intron_id 5 utg349_pilon exonerate:protein2genome:local splice3 1100863 1100864 . + . intron_id 4 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1100865 1100873 . + . utg349_pilon exonerate:protein2genome:local exon 1100865 1100873 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1100874 1100875 . + . intron_id 6 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1100874 1241956 . + . intron_id 6 utg349_pilon exonerate:protein2genome:local splice3 1241955 1241956 . + . intron_id 5 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1241957 1242003 . + . utg349_pilon exonerate:protein2genome:local exon 1241957 1242003 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1242004 1242005 . + . intron_id 7 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 1242004 1377372 . + . intron_id 7 utg349_pilon exonerate:protein2genome:local splice3 1377371 1377372 . + . intron_id 6 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1377373 1377581 . + . utg349_pilon exonerate:protein2genome:local exon 1377373 1377581 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1377582 1377583 . + . intron_id 8 ; splice_site "TT" utg349_pilon exonerate:protein2genome:local intron 1377582 1442765 . + . intron_id 8 utg349_pilon exonerate:protein2genome:local splice3 1442764 1442765 . + . intron_id 7 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 1442766 1442870 . + . utg349_pilon exonerate:protein2genome:local exon 1442766 1442870 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1442871 1442872 . + . intron_id 9 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1442871 1639763 . + . intron_id 9 utg349_pilon exonerate:protein2genome:local splice3 1639762 1639763 . + . intron_id 8 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1639764 1640004 . + . utg349_pilon exonerate:protein2genome:local exon 1639764 1640004 . + . insertions 15 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 497515 1640004 1819 + . alignment_id 0 ; Query GL50803_137618-t26_1-p1 ; Align 497515 144 69 ; Align 649159 168 72 ; Align 835452 193 168 ; Align 835626 249 171 ; Align 839923 307 15 ; Align 839938 313 456 ; Align 967695 466 120 ; Align 967816 506 48 ; Align 967864 523 15 ; Align 967879 531 201 ; Align 968083 598 21 ; Align 968104 607 144 ; Align 1100867 656 6 ; Align 1241959 659 45 ; Align 1377373 674 207 ; Align 1442767 744 102 ; Align 1639765 779 9 ; Align 1639780 782 102 ; Align 1639891 816 114 utg349_pilon exonerate:protein2genome:local gene 868525 868839 569 - . gene_id 0 ; sequence GL50803_137619-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 868525 868839 . - . utg349_pilon exonerate:protein2genome:local exon 868525 868839 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 868525 868839 569 - . alignment_id 0 ; Query GL50803_137619-t26_1-p1 ; Align 868840 1 315 utg64_pilon exonerate:protein2genome:local gene 83777 291662 1746 + . gene_id 0 ; sequence GL50803_137620-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 83777 83909 . + . utg64_pilon exonerate:protein2genome:local exon 83777 83909 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 83910 83911 . + . intron_id 1 ; splice_site "GA" utg64_pilon exonerate:protein2genome:local intron 83910 150761 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 150760 150761 . + . intron_id 0 ; splice_site "TG" utg64_pilon exonerate:protein2genome:local cds 150762 151124 . + . utg64_pilon exonerate:protein2genome:local exon 150762 151124 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 151125 151126 . + . intron_id 2 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 151125 279990 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 279989 279990 . + . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 279991 281343 . + . utg64_pilon exonerate:protein2genome:local exon 279991 281343 . + . insertions 15 ; deletions 13 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local splice5 281344 281345 . + . intron_id 3 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 281344 291502 . + . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 291501 291502 . + . intron_id 2 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local cds 291503 291662 . + . utg64_pilon exonerate:protein2genome:local exon 291503 291662 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 83777 291662 1746 + . alignment_id 0 ; Query GL50803_137620-t26_1-p1 ; Align 83777 4 132 ; Align 150764 49 360 ; Align 279993 170 42 ; Align 280038 184 42 ; Align 280083 198 66 ; Align 280149 222 57 ; Align 280209 241 72 ; Align 280281 267 45 ; Align 280329 282 54 ; Align 280383 301 96 ; Align 280479 336 39 ; Align 280518 350 210 ; Align 280728 424 150 ; Align 280881 474 153 ; Align 281036 525 306 ; Align 291504 628 159 utg11_pilon exonerate:protein2genome:local gene 220185 654268 394 - . gene_id 0 ; sequence GL50803_137621-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 653826 654268 . - . utg11_pilon exonerate:protein2genome:local exon 653826 654268 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 653824 653825 . - . intron_id 1 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 557397 653825 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 557397 557398 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 557187 557396 . - . utg11_pilon exonerate:protein2genome:local exon 557187 557396 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local splice5 557185 557186 . - . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 416760 557186 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 416760 416761 . - . intron_id 1 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 416718 416759 . - . utg11_pilon exonerate:protein2genome:local exon 416718 416759 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 416716 416717 . - . intron_id 3 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 220242 416717 . - . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 220242 220243 . - . intron_id 2 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 220185 220241 . - . utg11_pilon exonerate:protein2genome:local exon 220185 220241 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 220185 654268 394 - . alignment_id 0 ; Query GL50803_137621-t26_1-p1 ; Align 654269 8 441 ; Align 557396 156 30 ; Align 557364 166 177 ; Align 416760 225 42 ; Align 220242 239 57 utg18_pilon exonerate:protein2genome:local gene 72551 74029 2035 - . gene_id 0 ; sequence GL50803_137641-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 72551 74029 . - . utg18_pilon exonerate:protein2genome:local exon 72551 74029 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 72551 74029 2035 - . alignment_id 0 ; Query GL50803_137641-t26_1-p1 ; Align 74030 1 1479 utg731_pilon exonerate:protein2genome:local gene 1437687 1440191 3615 + . gene_id 0 ; sequence GL50803_13766-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1437687 1440191 . + . utg731_pilon exonerate:protein2genome:local exon 1437687 1440191 . + . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1437687 1440191 3615 + . alignment_id 0 ; Query GL50803_13766-t26_1-p1 ; Align 1437687 13 2133 ; Align 1439826 724 366 utg11_pilon exonerate:protein2genome:local gene 534623 537079 2842 + . gene_id 0 ; sequence GL50803_137672-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 534623 537079 . + . utg11_pilon exonerate:protein2genome:local exon 534623 537079 . + . insertions 36 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 534623 537079 2842 + . alignment_id 0 ; Query GL50803_137672-t26_1-p1 ; Align 534623 1 147 ; Align 534773 50 420 ; Align 535196 190 54 ; Align 535253 208 264 ; Align 535523 296 33 ; Align 535559 307 276 ; Align 535844 399 27 ; Align 535877 408 480 ; Align 536360 568 720 utg1966_pilon exonerate:protein2genome:local gene 45045 48109 2158 - . gene_id 0 ; sequence GL50803_137673-t26_1-p1 ; gene_orientation + utg1966_pilon exonerate:protein2genome:local cds 46404 48109 . - . utg1966_pilon exonerate:protein2genome:local exon 46404 48109 . - . insertions 0 ; deletions 4 ; frameshifts 1 utg1966_pilon exonerate:protein2genome:local splice5 46402 46403 . - . intron_id 1 ; splice_site "GC" utg1966_pilon exonerate:protein2genome:local intron 45137 46403 . - . intron_id 1 utg1966_pilon exonerate:protein2genome:local splice3 45137 45138 . - . intron_id 0 ; splice_site "AG" utg1966_pilon exonerate:protein2genome:local cds 45045 45136 . - . utg1966_pilon exonerate:protein2genome:local exon 45045 45136 . - . insertions 0 ; deletions 1 utg1966_pilon exonerate:protein2genome:local similarity 45045 48109 2158 - . alignment_id 0 ; Query GL50803_137673-t26_1-p1 ; Align 48110 393 117 ; Align 47992 432 864 ; Align 47128 724 723 ; Align 45135 966 51 ; Align 45084 984 39 utg11_pilon exonerate:protein2genome:local gene 84405 85121 756 - . gene_id 0 ; sequence GL50803_137674-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 84405 85121 . - . utg11_pilon exonerate:protein2genome:local exon 84405 85121 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 84405 85121 756 - . alignment_id 0 ; Query GL50803_137674-t26_1-p1 ; Align 85122 1 717 utg349_pilon exonerate:protein2genome:local gene 815211 956491 601 - . gene_id 0 ; sequence GL50803_137676-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 955667 956491 . - . utg349_pilon exonerate:protein2genome:local exon 955667 956491 . - . insertions 15 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 955665 955666 . - . intron_id 1 ; splice_site "TT" utg349_pilon exonerate:protein2genome:local intron 815244 955666 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 815244 815245 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 815211 815243 . - . utg349_pilon exonerate:protein2genome:local exon 815211 815243 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 815211 956491 601 - . alignment_id 0 ; Query GL50803_137676-t26_1-p1 ; Align 956492 12 345 ; Align 956144 127 12 ; Align 956123 131 75 ; Align 956045 156 378 ; Align 815244 282 33 utg212_pilon exonerate:protein2genome:local gene 126081 209700 807 + . gene_id 0 ; sequence GL50803_137679-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 126081 126797 . + . utg212_pilon exonerate:protein2genome:local exon 126081 126797 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 126798 126799 . + . intron_id 1 ; splice_site "GT" utg212_pilon exonerate:protein2genome:local intron 126798 209616 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 209615 209616 . + . intron_id 0 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local cds 209617 209700 . + . utg212_pilon exonerate:protein2genome:local exon 209617 209700 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 126081 209700 807 + . alignment_id 0 ; Query GL50803_137679-t26_1-p1 ; Align 126081 1 717 ; Align 209617 240 84 utg349_pilon exonerate:protein2genome:local gene 1457744 1459291 1870 + . gene_id 0 ; sequence GL50803_137680-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1457744 1459291 . + . utg349_pilon exonerate:protein2genome:local exon 1457744 1459291 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1457744 1459291 1870 + . alignment_id 0 ; Query GL50803_137680-t26_1-p1 ; Align 1457744 1 1044 ; Align 1458788 350 504 utg47_pilon exonerate:protein2genome:local gene 1745191 2022151 1158 - . gene_id 0 ; sequence GL50803_137681-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2021974 2022151 . - . utg47_pilon exonerate:protein2genome:local exon 2021974 2022151 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 2021972 2021973 . - . intron_id 1 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local intron 1914485 2021973 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1914485 1914486 . - . intron_id 0 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 1913850 1914484 . - . utg47_pilon exonerate:protein2genome:local exon 1913850 1914484 . - . insertions 6 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 1913848 1913849 . - . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1828913 1913849 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1828913 1828914 . - . intron_id 1 ; splice_site "CC" utg47_pilon exonerate:protein2genome:local cds 1828789 1828912 . - . utg47_pilon exonerate:protein2genome:local exon 1828789 1828912 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 1828787 1828788 . - . intron_id 3 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1745313 1828788 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 1745313 1745314 . - . intron_id 2 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 1745191 1745312 . - . utg47_pilon exonerate:protein2genome:local exon 1745191 1745312 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1745191 2022151 1158 - . alignment_id 0 ; Query GL50803_137681-t26_1-p1 ; Align 2022152 15 57 ; Align 2022095 35 120 ; Align 1914483 76 255 ; Align 1914225 161 51 ; Align 1914171 178 210 ; Align 1913961 250 21 ; Align 1913940 258 90 ; Align 1828913 288 75 ; Align 1828838 314 48 ; Align 1745311 331 120 utg11_pilon exonerate:protein2genome:local gene 1807823 1808649 721 - . gene_id 0 ; sequence GL50803_137682-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1807969 1808649 . - . utg11_pilon exonerate:protein2genome:local exon 1807969 1808649 . - . insertions 18 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1807967 1807968 . - . intron_id 1 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 1807934 1807968 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1807934 1807935 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1807823 1807933 . - . utg11_pilon exonerate:protein2genome:local exon 1807823 1807933 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1807823 1808649 721 - . alignment_id 0 ; Query GL50803_137682-t26_1-p1 ; Align 1808650 1 453 ; Align 1808194 152 63 ; Align 1808125 173 57 ; Align 1808062 192 24 ; Align 1808035 200 66 ; Align 1807934 222 18 ; Align 1807916 230 93 utg212_pilon exonerate:protein2genome:local gene 562482 566487 5415 + . gene_id 0 ; sequence GL50803_137684-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 562482 566487 . + . utg212_pilon exonerate:protein2genome:local exon 562482 566487 . + . insertions 3 ; deletions 2 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 562482 566487 5415 + . alignment_id 0 ; Query GL50803_137684-t26_1-p1 ; Align 562482 1 1407 ; Align 563889 472 1659 ; Align 565549 1025 114 ; Align 565666 1063 822 utg265_pilon exonerate:protein2genome:local gene 92450 94606 3437 - . gene_id 0 ; sequence GL50803_137685-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 92450 94606 . - . utg265_pilon exonerate:protein2genome:local exon 92450 94606 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 92450 94606 3437 - . alignment_id 0 ; Query GL50803_137685-t26_1-p1 ; Align 94607 1 2157 utg1966_pilon exonerate:protein2genome:local gene 145546 147912 3298 - . gene_id 0 ; sequence GL50803_137688-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 145546 147912 . - . utg1966_pilon exonerate:protein2genome:local exon 145546 147912 . - . insertions 3 ; deletions 3 utg1966_pilon exonerate:protein2genome:local similarity 145546 147912 3298 - . alignment_id 0 ; Query GL50803_137688-t26_1-p1 ; Align 147913 389 135 ; Align 147778 437 798 ; Align 146977 703 1431 utg265_pilon exonerate:protein2genome:local gene 365106 388132 27514 - . gene_id 0 ; sequence GL50803_137689-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 365106 388132 . - . utg265_pilon exonerate:protein2genome:local exon 365106 388132 . - . insertions 39 ; deletions 15 ; frameshifts 20 utg265_pilon exonerate:protein2genome:local similarity 365106 388132 27514 - . alignment_id 0 ; Query GL50803_137689-t26_1-p1 ; Align 388133 1 510 ; Align 387621 171 3 ; Align 387618 173 177 ; Align 387439 232 3 ; Align 387436 234 705 ; Align 386731 470 4818 ; Align 381911 2077 147 ; Align 381761 2126 2301 ; Align 379458 2893 6 ; Align 379452 2896 4659 ; Align 374790 4449 156 ; Align 374633 4501 1722 ; Align 372909 5075 141 ; Align 372767 5122 6 ; Align 372761 5125 867 ; Align 371894 5415 933 ; Align 370961 5727 33 ; Align 370926 5738 72 ; Align 370853 5762 387 ; Align 370463 5891 159 ; Align 370295 5944 204 ; Align 370090 6012 1047 ; Align 369040 6361 198 ; Align 368842 6428 69 ; Align 368771 6452 255 ; Align 368514 6538 417 ; Align 368097 6678 159 ; Align 367929 6731 2130 ; Align 365790 7441 570 ; Align 365220 7634 114 utg731_pilon exonerate:protein2genome:local gene 1269586 1270374 1098 - . gene_id 0 ; sequence GL50803_137690-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1269586 1270374 . - . utg731_pilon exonerate:protein2genome:local exon 1269586 1270374 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1269586 1270374 1098 - . alignment_id 0 ; Query GL50803_137690-t26_1-p1 ; Align 1270375 1 66 ; Align 1270306 23 720 utg11_pilon exonerate:protein2genome:local gene 909361 939554 685 - . gene_id 0 ; sequence GL50803_137691-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 939117 939554 . - . utg11_pilon exonerate:protein2genome:local exon 939117 939554 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 939115 939116 . - . intron_id 1 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 909478 939116 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 909478 909479 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 909361 909477 . - . utg11_pilon exonerate:protein2genome:local exon 909361 909477 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 909361 939554 685 - . alignment_id 0 ; Query GL50803_137691-t26_1-p1 ; Align 939555 21 438 ; Align 909478 167 117 utg265_pilon exonerate:protein2genome:local gene 673174 673632 537 + . gene_id 0 ; sequence GL50803_137692-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 673174 673632 . + . utg265_pilon exonerate:protein2genome:local exon 673174 673632 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 673174 673632 537 + . alignment_id 0 ; Query GL50803_137692-t26_1-p1 ; Align 673174 123 459 utg99_pilon exonerate:protein2genome:local gene 306611 308041 1913 - . gene_id 0 ; sequence GL50803_137693-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 306611 308041 . - . utg99_pilon exonerate:protein2genome:local exon 306611 308041 . - . insertions 6 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 306611 308041 1913 - . alignment_id 0 ; Query GL50803_137693-t26_1-p1 ; Align 308042 242 909 ; Align 307127 545 516 utg99_pilon exonerate:protein2genome:local gene 401134 403710 3980 + . gene_id 0 ; sequence GL50803_137695-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 401134 403710 . + . utg99_pilon exonerate:protein2genome:local exon 401134 403710 . + . insertions 6 ; deletions 3 utg99_pilon exonerate:protein2genome:local similarity 401134 403710 3980 + . alignment_id 0 ; Query GL50803_137695-t26_1-p1 ; Align 401134 1 465 ; Align 401599 159 726 ; Align 402331 401 1380 utg47_pilon exonerate:protein2genome:local gene 180573 442676 2889 - . gene_id 0 ; sequence GL50803_137696-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 441596 442676 . - . utg47_pilon exonerate:protein2genome:local exon 441596 442676 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 441594 441595 . - . intron_id 1 ; splice_site "TT" utg47_pilon exonerate:protein2genome:local intron 438652 441595 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 438652 438653 . - . intron_id 0 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 438207 438651 . - . utg47_pilon exonerate:protein2genome:local exon 438207 438651 . - . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 438205 438206 . - . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 298416 438206 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 298416 298417 . - . intron_id 1 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local cds 298295 298415 . - . utg47_pilon exonerate:protein2genome:local exon 298295 298415 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 298293 298294 . - . intron_id 3 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 182717 298294 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 182717 182718 . - . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 181224 182716 . - . utg47_pilon exonerate:protein2genome:local exon 181224 182716 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local splice5 181222 181223 . - . intron_id 4 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 180906 181223 . - . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 180906 180907 . - . intron_id 3 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 180573 180905 . - . utg47_pilon exonerate:protein2genome:local exon 180573 180905 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 180573 442676 2889 - . alignment_id 0 ; Query GL50803_137696-t26_1-p1 ; Align 442677 1 1080 ; Align 438650 362 177 ; Align 438470 421 249 ; Align 438218 504 9 ; Align 298415 508 120 ; Align 182717 548 1338 ; Align 181377 995 153 ; Align 180906 1046 333 utg349_pilon exonerate:protein2genome:local gene 1102204 1435690 1329 + . gene_id 0 ; sequence GL50803_137697-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1102204 1102267 . + . utg349_pilon exonerate:protein2genome:local exon 1102204 1102267 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1102268 1102269 . + . intron_id 1 ; splice_site "CT" utg349_pilon exonerate:protein2genome:local intron 1102268 1236670 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1236669 1236670 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1236671 1236976 . + . utg349_pilon exonerate:protein2genome:local exon 1236671 1236976 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1236977 1236978 . + . intron_id 2 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local intron 1236977 1434782 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1434781 1434782 . + . intron_id 1 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1434783 1435690 . + . utg349_pilon exonerate:protein2genome:local exon 1434783 1435690 . + . insertions 15 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 1102204 1435690 1329 + . alignment_id 0 ; Query GL50803_137697-t26_1-p1 ; Align 1102204 46 63 ; Align 1236673 68 228 ; Align 1236904 144 72 ; Align 1434785 169 186 ; Align 1434974 231 186 ; Align 1435160 295 276 ; Align 1435439 387 18 ; Align 1435466 393 90 ; Align 1435556 426 135 utg47_pilon exonerate:protein2genome:local gene 227720 228601 1429 - . gene_id 0 ; sequence GL50803_137698-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 227720 228601 . - . utg47_pilon exonerate:protein2genome:local exon 227720 228601 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 227720 228601 1429 - . alignment_id 0 ; Query GL50803_137698-t26_1-p1 ; Align 228602 1 882 utg265_pilon exonerate:protein2genome:local gene 673171 673632 538 + . gene_id 0 ; sequence GL50803_137699-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 673171 673632 . + . utg265_pilon exonerate:protein2genome:local exon 673171 673632 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 673171 673632 538 + . alignment_id 0 ; Query GL50803_137699-t26_1-p1 ; Align 673171 122 462 utg265_pilon exonerate:protein2genome:local gene 871889 872623 699 - . gene_id 0 ; sequence GL50803_137701-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 871889 872623 . - . utg265_pilon exonerate:protein2genome:local exon 871889 872623 . - . insertions 15 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 871889 872623 699 - . alignment_id 0 ; Query GL50803_137701-t26_1-p1 ; Align 872624 1 438 ; Align 872171 147 282 utg265_pilon exonerate:protein2genome:local gene 700555 701523 1372 + . gene_id 0 ; sequence GL50803_137702-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 700555 701523 . + . utg265_pilon exonerate:protein2genome:local exon 700555 701523 . + . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 700555 701523 1372 + . alignment_id 0 ; Query GL50803_137702-t26_1-p1 ; Align 700555 2 873 ; Align 701431 293 93 utg64_pilon exonerate:protein2genome:local gene 205131 206633 1661 - . gene_id 0 ; sequence GL50803_137703-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 205131 206633 . - . utg64_pilon exonerate:protein2genome:local exon 205131 206633 . - . insertions 12 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 205131 206633 1661 - . alignment_id 0 ; Query GL50803_137703-t26_1-p1 ; Align 206634 16 978 ; Align 205644 342 513 utg99_pilon exonerate:protein2genome:local gene 454956 455828 1079 - . gene_id 0 ; sequence GL50803_137704-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 454956 455828 . - . utg99_pilon exonerate:protein2genome:local exon 454956 455828 . - . insertions 0 ; deletions 4 utg99_pilon exonerate:protein2genome:local similarity 454956 455828 1079 - . alignment_id 0 ; Query GL50803_137704-t26_1-p1 ; Align 455829 222 567 ; Align 455262 415 306 utg47_pilon exonerate:protein2genome:local gene 1821115 1822656 2292 - . gene_id 0 ; sequence GL50803_137705-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1821115 1822656 . - . utg47_pilon exonerate:protein2genome:local exon 1821115 1822656 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1821115 1822656 2292 - . alignment_id 0 ; Query GL50803_137705-t26_1-p1 ; Align 1822657 17 1542 utg265_pilon exonerate:protein2genome:local gene 894791 896581 2354 + . gene_id 0 ; sequence GL50803_137706-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 894791 896581 . + . utg265_pilon exonerate:protein2genome:local exon 894791 896581 . + . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 894791 896581 2354 + . alignment_id 0 ; Query GL50803_137706-t26_1-p1 ; Align 894791 1 894 ; Align 895688 299 489 ; Align 896180 462 402 utg349_pilon exonerate:protein2genome:local gene 1236505 1450175 1806 + . gene_id 0 ; sequence GL50803_137707-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1236505 1237413 . + . utg349_pilon exonerate:protein2genome:local exon 1236505 1237413 . + . insertions 9 ; deletions 2 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local splice5 1237414 1237415 . + . intron_id 1 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local intron 1237414 1434857 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1434856 1434857 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1434858 1435609 . + . utg349_pilon exonerate:protein2genome:local exon 1434858 1435609 . + . insertions 18 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1435610 1435611 . + . intron_id 2 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 1435610 1450079 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1450078 1450079 . + . intron_id 1 ; splice_site "CG" utg349_pilon exonerate:protein2genome:local cds 1450080 1450175 . + . utg349_pilon exonerate:protein2genome:local exon 1450080 1450175 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1236505 1450175 1806 + . alignment_id 0 ; Query GL50803_137707-t26_1-p1 ; Align 1236505 15 114 ; Align 1236619 54 420 ; Align 1237045 194 159 ; Align 1237206 247 111 ; Align 1237320 284 39 ; Align 1237359 298 54 ; Align 1434860 317 303 ; Align 1435166 418 126 ; Align 1435295 460 63 ; Align 1435361 481 60 ; Align 1435421 502 36 ; Align 1435466 514 144 ; Align 1450080 562 96 utg349_pilon exonerate:protein2genome:local gene 1236505 1450175 1806 + . gene_id 0 ; sequence GL50803_137708-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1236505 1237413 . + . utg349_pilon exonerate:protein2genome:local exon 1236505 1237413 . + . insertions 9 ; deletions 2 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local splice5 1237414 1237415 . + . intron_id 1 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local intron 1237414 1434857 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1434856 1434857 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1434858 1435609 . + . utg349_pilon exonerate:protein2genome:local exon 1434858 1435609 . + . insertions 18 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1435610 1435611 . + . intron_id 2 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 1435610 1450079 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1450078 1450079 . + . intron_id 1 ; splice_site "CG" utg349_pilon exonerate:protein2genome:local cds 1450080 1450175 . + . utg349_pilon exonerate:protein2genome:local exon 1450080 1450175 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1236505 1450175 1806 + . alignment_id 0 ; Query GL50803_137708-t26_1-p1 ; Align 1236505 15 114 ; Align 1236619 54 420 ; Align 1237045 194 159 ; Align 1237206 247 111 ; Align 1237320 284 39 ; Align 1237359 298 54 ; Align 1434860 317 303 ; Align 1435166 418 126 ; Align 1435295 460 63 ; Align 1435361 481 60 ; Align 1435421 502 36 ; Align 1435466 514 144 ; Align 1450080 562 96 utg47_pilon exonerate:protein2genome:local gene 196145 200134 5872 - . gene_id 0 ; sequence GL50803_13771-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 196145 200134 . - . utg47_pilon exonerate:protein2genome:local exon 196145 200134 . - . insertions 12 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 196145 200134 5872 - . alignment_id 0 ; Query GL50803_13771-t26_1-p1 ; Align 200135 1 594 ; Align 199529 199 1008 ; Align 198521 536 732 ; Align 197789 783 1644 utg64_pilon exonerate:protein2genome:local gene 85523 479431 1432 + . gene_id 0 ; sequence GL50803_137710-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 85523 85672 . + . utg64_pilon exonerate:protein2genome:local exon 85523 85672 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local splice5 85673 85674 . + . intron_id 1 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local intron 85673 147249 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 147248 147249 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 147250 147477 . + . utg64_pilon exonerate:protein2genome:local exon 147250 147477 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 147478 147479 . + . intron_id 2 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 147478 154239 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 154238 154239 . + . intron_id 1 ; splice_site "TG" utg64_pilon exonerate:protein2genome:local cds 154240 154646 . + . utg64_pilon exonerate:protein2genome:local exon 154240 154646 . + . insertions 9 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 154647 154648 . + . intron_id 3 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 154647 280739 . + . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 280738 280739 . + . intron_id 2 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 280740 281355 . + . utg64_pilon exonerate:protein2genome:local exon 280740 281355 . + . insertions 15 ; deletions 1 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local splice5 281356 281357 . + . intron_id 4 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 281356 479289 . + . intron_id 4 utg64_pilon exonerate:protein2genome:local splice3 479288 479289 . + . intron_id 3 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 479290 479431 . + . utg64_pilon exonerate:protein2genome:local exon 479290 479431 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 85523 479431 1432 + . alignment_id 0 ; Query GL50803_137710-t26_1-p1 ; Align 85523 8 30 ; Align 85555 18 117 ; Align 147252 58 63 ; Align 147315 80 162 ; Align 154242 135 48 ; Align 154296 151 93 ; Align 154392 182 180 ; Align 154572 243 75 ; Align 280740 268 147 ; Align 280890 317 42 ; Align 280932 332 102 ; Align 281036 366 96 ; Align 281144 398 210 ; Align 479291 469 141 utg47_pilon exonerate:protein2genome:local gene 1667195 1686554 23344 - . gene_id 0 ; sequence GL50803_137711-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1680262 1686554 . - . utg47_pilon exonerate:protein2genome:local exon 1680262 1686554 . - . insertions 27 ; deletions 4 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local splice5 1680260 1680261 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1680226 1680261 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1680226 1680227 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1669762 1680225 . - . utg47_pilon exonerate:protein2genome:local exon 1669762 1680225 . - . insertions 18 ; deletions 4 utg47_pilon exonerate:protein2genome:local splice5 1669760 1669761 . - . intron_id 2 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local intron 1669720 1669761 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1669720 1669721 . - . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1667195 1669719 . - . utg47_pilon exonerate:protein2genome:local exon 1667195 1669719 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1667195 1686554 23344 - . alignment_id 0 ; Query GL50803_137711-t26_1-p1 ; Align 1686555 1 42 ; Align 1686512 15 2172 ; Align 1684340 742 834 ; Align 1683491 1020 168 ; Align 1683323 1077 1992 ; Align 1681322 1741 441 ; Align 1680878 1888 615 ; Align 1680224 2094 1218 ; Align 1679006 2502 3318 ; Align 1675679 3608 2076 ; Align 1673597 4300 51 ; Align 1673543 4317 3357 ; Align 1670186 5437 15 ; Align 1670171 5443 408 ; Align 1669718 5580 2523 utg47_pilon exonerate:protein2genome:local gene 1567602 1578165 15604 - . gene_id 0 ; sequence GL50803_137712-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1567602 1578165 . - . utg47_pilon exonerate:protein2genome:local exon 1567602 1578165 . - . insertions 21 ; deletions 2 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1567602 1578165 15604 - . alignment_id 0 ; Query GL50803_137712-t26_1-p1 ; Align 1578166 2943 750 ; Align 1577407 3193 69 ; Align 1577335 3216 213 ; Align 1577119 3287 15 ; Align 1577098 3292 249 ; Align 1576849 3377 5730 ; Align 1571118 5287 3516 utg47_pilon exonerate:protein2genome:local gene 2168462 2172187 3755 + . gene_id 0 ; sequence GL50803_137713-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2168462 2172187 . + . utg47_pilon exonerate:protein2genome:local exon 2168462 2172187 . + . insertions 12 ; deletions 20 ; frameshifts 9 utg47_pilon exonerate:protein2genome:local similarity 2168462 2172187 3755 + . alignment_id 0 ; Query GL50803_137713-t26_1-p1 ; Align 2168462 1 186 ; Align 2168652 63 303 ; Align 2168955 168 312 ; Align 2169267 273 147 ; Align 2169417 322 75 ; Align 2169492 348 33 ; Align 2169525 364 216 ; Align 2169741 438 9 ; Align 2169751 441 96 ; Align 2169851 473 141 ; Align 2169992 523 1143 ; Align 2171141 904 312 ; Align 2171453 1011 87 ; Align 2171543 1040 537 ; Align 2172080 1220 108 utg47_pilon exonerate:protein2genome:local gene 94494 185905 1541 - . gene_id 0 ; sequence GL50803_137714-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 184426 185905 . - . utg47_pilon exonerate:protein2genome:local exon 184426 185905 . - . insertions 48 ; deletions 5 utg47_pilon exonerate:protein2genome:local splice5 184424 184425 . - . intron_id 1 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local intron 94619 184425 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 94619 94620 . - . intron_id 0 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 94494 94618 . - . utg47_pilon exonerate:protein2genome:local exon 94494 94618 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 94494 185905 1541 - . alignment_id 0 ; Query GL50803_137714-t26_1-p1 ; Align 185906 1 69 ; Align 185837 25 63 ; Align 185771 46 48 ; Align 185708 62 48 ; Align 185648 78 267 ; Align 185381 169 237 ; Align 185135 248 15 ; Align 185114 253 96 ; Align 185015 285 345 ; Align 184670 401 180 ; Align 184490 462 63 ; Align 94617 484 123 utg11_pilon exonerate:protein2genome:local gene 1167657 1169696 2660 + . gene_id 0 ; sequence GL50803_137715-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1167657 1169696 . + . utg11_pilon exonerate:protein2genome:local exon 1167657 1169696 . + . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1167657 1169696 2660 + . alignment_id 0 ; Query GL50803_137715-t26_1-p1 ; Align 1167657 1 582 ; Align 1168242 195 39 ; Align 1168284 208 1413 utg47_pilon exonerate:protein2genome:local gene 1928714 1933537 5783 + . gene_id 0 ; sequence GL50803_137716-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1928714 1930447 . + . utg47_pilon exonerate:protein2genome:local exon 1928714 1930447 . + . insertions 6 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 1930448 1930449 . + . intron_id 1 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 1930448 1930486 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1930485 1930486 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1930487 1932913 . + . utg47_pilon exonerate:protein2genome:local exon 1930487 1932913 . + . insertions 6 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 1932914 1932915 . + . intron_id 2 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 1932914 1932943 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1932942 1932943 . + . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1932944 1933537 . + . utg47_pilon exonerate:protein2genome:local exon 1932944 1933537 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1928714 1933537 5783 + . alignment_id 0 ; Query GL50803_137716-t26_1-p1 ; Align 1928714 1 564 ; Align 1929284 189 720 ; Align 1930004 430 444 ; Align 1930487 578 519 ; Align 1931009 751 1068 ; Align 1932080 1107 762 ; Align 1932842 1363 18 ; Align 1932860 1370 54 ; Align 1932944 1388 594 utg47_pilon exonerate:protein2genome:local gene 26410 557417 1851 - . gene_id 0 ; sequence GL50803_137717-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 556226 557417 . - . utg47_pilon exonerate:protein2genome:local exon 556226 557417 . - . insertions 15 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local splice5 556224 556225 . - . intron_id 1 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 443431 556225 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 443431 443432 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 443398 443430 . - . utg47_pilon exonerate:protein2genome:local exon 443398 443430 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 443396 443397 . - . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 306028 443397 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 306028 306029 . - . intron_id 1 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local cds 305783 306027 . - . utg47_pilon exonerate:protein2genome:local exon 305783 306027 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 305781 305782 . - . intron_id 3 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 184720 305782 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 184720 184721 . - . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 184564 184719 . - . utg47_pilon exonerate:protein2genome:local exon 184564 184719 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 184562 184563 . - . intron_id 4 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 90716 184563 . - . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 90716 90717 . - . intron_id 3 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 90518 90715 . - . utg47_pilon exonerate:protein2genome:local exon 90518 90715 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 90516 90517 . - . intron_id 5 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 26457 90517 . - . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 26457 26458 . - . intron_id 4 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 26410 26456 . - . utg47_pilon exonerate:protein2genome:local exon 26410 26456 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 26410 557417 1851 - . alignment_id 0 ; Query GL50803_137717-t26_1-p1 ; Align 557418 29 99 ; Align 557316 62 225 ; Align 557088 137 69 ; Align 557019 161 6 ; Align 557011 163 147 ; Align 556861 212 225 ; Align 556633 287 279 ; Align 556351 380 123 ; Align 443430 422 30 ; Align 306027 433 135 ; Align 305889 478 105 ; Align 184718 514 42 ; Align 184673 528 108 ; Align 90714 565 195 ; Align 26455 631 45 utg47_pilon exonerate:protein2genome:local gene 1398341 1515183 1190 + . gene_id 0 ; sequence GL50803_137718-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1398341 1399483 . + . utg47_pilon exonerate:protein2genome:local exon 1398341 1399483 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1399484 1399485 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1399484 1515138 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1515137 1515138 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1515139 1515183 . + . utg47_pilon exonerate:protein2genome:local exon 1515139 1515183 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1398341 1515183 1190 + . alignment_id 0 ; Query GL50803_137718-t26_1-p1 ; Align 1398341 1 1143 ; Align 1515139 382 45 utg47_pilon exonerate:protein2genome:local gene 1232619 1234016 2202 - . gene_id 0 ; sequence GL50803_137719-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1232619 1234016 . - . utg47_pilon exonerate:protein2genome:local exon 1232619 1234016 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1232619 1234016 2202 - . alignment_id 0 ; Query GL50803_137719-t26_1-p1 ; Align 1234017 1 1398 utg47_pilon exonerate:protein2genome:local gene 1150428 1152638 1809 + . gene_id 0 ; sequence GL50803_137720-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1150428 1151535 . + . utg47_pilon exonerate:protein2genome:local exon 1150428 1151535 . + . insertions 0 ; deletions 9 utg47_pilon exonerate:protein2genome:local splice5 1151536 1151537 . + . intron_id 1 ; splice_site "TC" utg47_pilon exonerate:protein2genome:local intron 1151536 1151565 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1151564 1151565 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1151566 1152638 . + . utg47_pilon exonerate:protein2genome:local exon 1151566 1152638 . + . insertions 3 ; deletions 9 utg47_pilon exonerate:protein2genome:local similarity 1150428 1152638 1809 + . alignment_id 0 ; Query GL50803_137720-t26_1-p1 ; Align 1150428 1 525 ; Align 1150953 179 276 ; Align 1151229 274 129 ; Align 1151358 320 177 ; Align 1151568 381 531 ; Align 1152099 563 201 ; Align 1152300 631 45 ; Align 1152345 647 27 ; Align 1152372 657 204 ; Align 1152579 725 60 utg11_pilon exonerate:protein2genome:local gene 909334 1159307 1139 - . gene_id 0 ; sequence GL50803_137721-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1159051 1159307 . - . utg11_pilon exonerate:protein2genome:local exon 1159051 1159307 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1159049 1159050 . - . intron_id 1 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local intron 1063403 1159050 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1063403 1063404 . - . intron_id 0 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local cds 1063321 1063402 . - . utg11_pilon exonerate:protein2genome:local exon 1063321 1063402 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1063319 1063320 . - . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 910234 1063320 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 910234 910235 . - . intron_id 1 ; splice_site "TG" utg11_pilon exonerate:protein2genome:local cds 909334 910233 . - . utg11_pilon exonerate:protein2genome:local exon 909334 910233 . - . insertions 21 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 909334 1159307 1139 - . alignment_id 0 ; Query GL50803_137721-t26_1-p1 ; Align 1159308 17 162 ; Align 1159143 71 90 ; Align 1063402 102 81 ; Align 910234 129 213 ; Align 910018 200 36 ; Align 909979 212 63 ; Align 909913 233 30 ; Align 909880 243 288 ; Align 909589 339 129 ; Align 909454 382 120 utg47_pilon exonerate:protein2genome:local gene 1421842 2029080 1599 + . gene_id 0 ; sequence GL50803_137722-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1421842 1422160 . + . utg47_pilon exonerate:protein2genome:local exon 1421842 1422160 . + . insertions 9 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 1422161 1422162 . + . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1422161 1555551 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1555550 1555551 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1555552 1555695 . + . utg47_pilon exonerate:protein2genome:local exon 1555552 1555695 . + . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 1555696 1555697 . + . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1555696 1690925 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1690924 1690925 . + . intron_id 1 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1690926 1690974 . + . utg47_pilon exonerate:protein2genome:local exon 1690926 1690974 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1690975 1690976 . + . intron_id 3 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1690975 1850387 . + . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 1850386 1850387 . + . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1850388 1850900 . + . utg47_pilon exonerate:protein2genome:local exon 1850388 1850900 . + . insertions 3 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1850901 1850902 . + . intron_id 4 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 1850901 1974465 . + . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 1974464 1974465 . + . intron_id 3 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1974466 1975172 . + . utg47_pilon exonerate:protein2genome:local exon 1974466 1975172 . + . insertions 9 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1975173 1975174 . + . intron_id 5 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 1975173 2028898 . + . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 2028897 2028898 . + . intron_id 4 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2028899 2029080 . + . utg47_pilon exonerate:protein2genome:local exon 2028899 2029080 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1421842 2029080 1599 + . alignment_id 0 ; Query GL50803_137722-t26_1-p1 ; Align 1421842 75 33 ; Align 1421881 86 126 ; Align 1422007 131 33 ; Align 1422043 142 117 ; Align 1555554 182 30 ; Align 1555584 194 36 ; Align 1555620 207 75 ; Align 1690928 233 45 ; Align 1850389 249 93 ; Align 1850485 280 72 ; Align 1850557 306 342 ; Align 1974467 421 102 ; Align 1974572 455 162 ; Align 1974734 510 24 ; Align 1974764 518 156 ; Align 1974920 571 252 ; Align 2028901 656 180 utg47_pilon exonerate:protein2genome:local gene 1421842 2029080 1599 + . gene_id 0 ; sequence GL50803_137723-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1421842 1422160 . + . utg47_pilon exonerate:protein2genome:local exon 1421842 1422160 . + . insertions 9 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 1422161 1422162 . + . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1422161 1555551 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1555550 1555551 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1555552 1555695 . + . utg47_pilon exonerate:protein2genome:local exon 1555552 1555695 . + . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 1555696 1555697 . + . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1555696 1690925 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1690924 1690925 . + . intron_id 1 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1690926 1690974 . + . utg47_pilon exonerate:protein2genome:local exon 1690926 1690974 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1690975 1690976 . + . intron_id 3 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1690975 1850387 . + . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 1850386 1850387 . + . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1850388 1850900 . + . utg47_pilon exonerate:protein2genome:local exon 1850388 1850900 . + . insertions 3 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1850901 1850902 . + . intron_id 4 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 1850901 1974465 . + . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 1974464 1974465 . + . intron_id 3 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1974466 1975172 . + . utg47_pilon exonerate:protein2genome:local exon 1974466 1975172 . + . insertions 9 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1975173 1975174 . + . intron_id 5 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 1975173 2028898 . + . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 2028897 2028898 . + . intron_id 4 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2028899 2029080 . + . utg47_pilon exonerate:protein2genome:local exon 2028899 2029080 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1421842 2029080 1599 + . alignment_id 0 ; Query GL50803_137723-t26_1-p1 ; Align 1421842 75 33 ; Align 1421881 86 126 ; Align 1422007 131 33 ; Align 1422043 142 117 ; Align 1555554 182 30 ; Align 1555584 194 36 ; Align 1555620 207 75 ; Align 1690928 233 45 ; Align 1850389 249 93 ; Align 1850485 280 72 ; Align 1850557 306 342 ; Align 1974467 421 102 ; Align 1974572 455 162 ; Align 1974734 510 24 ; Align 1974764 518 156 ; Align 1974920 571 252 ; Align 2028901 656 180 utg212_pilon exonerate:protein2genome:local gene 409772 409993 166 + . gene_id 0 ; sequence GL50803_137724-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 409772 409993 . + . utg212_pilon exonerate:protein2genome:local exon 409772 409993 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 409772 409993 166 + . alignment_id 0 ; Query GL50803_137724-t26_1-p1 ; Align 409772 1 222 utg212_pilon exonerate:protein2genome:local gene 400390 400611 166 - . gene_id 0 ; sequence GL50803_137724-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 400390 400611 . - . utg212_pilon exonerate:protein2genome:local exon 400390 400611 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 400390 400611 166 - . alignment_id 0 ; Query GL50803_137724-t26_1-p1 ; Align 400612 1 222 utg18_pilon exonerate:protein2genome:local gene 408269 409399 1672 + . gene_id 0 ; sequence GL50803_137725-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 408269 409399 . + . utg18_pilon exonerate:protein2genome:local exon 408269 409399 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 408269 409399 1672 + . alignment_id 0 ; Query GL50803_137725-t26_1-p1 ; Align 408269 1 1131 utg11_pilon exonerate:protein2genome:local gene 1511114 1517047 7544 - . gene_id 0 ; sequence GL50803_137726-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1511114 1517047 . - . utg11_pilon exonerate:protein2genome:local exon 1511114 1517047 . - . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1511114 1517047 7544 - . alignment_id 0 ; Query GL50803_137726-t26_1-p1 ; Align 1517048 1 1713 ; Align 1515332 572 3234 ; Align 1512095 1650 981 utg349_pilon exonerate:protein2genome:local gene 1561083 1566148 6839 - . gene_id 0 ; sequence GL50803_137727-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1561083 1566148 . - . utg349_pilon exonerate:protein2genome:local exon 1561083 1566148 . - . insertions 30 ; deletions 3 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 1561083 1566148 6839 - . alignment_id 0 ; Query GL50803_137727-t26_1-p1 ; Align 1566149 1 765 ; Align 1565381 256 519 ; Align 1564862 430 165 ; Align 1564697 486 15 ; Align 1564682 492 321 ; Align 1564358 599 6 ; Align 1564346 601 42 ; Align 1564301 615 201 ; Align 1564097 682 54 ; Align 1564040 700 429 ; Align 1563608 843 267 ; Align 1563338 932 147 ; Align 1563190 981 135 ; Align 1563054 1026 1878 ; Align 1561173 1652 90 utg265_pilon exonerate:protein2genome:local gene 871283 872239 830 - . gene_id 0 ; sequence GL50803_137728-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 871645 872239 . - . utg265_pilon exonerate:protein2genome:local exon 871645 872239 . - . insertions 15 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 871643 871644 . - . intron_id 1 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 871603 871644 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 871603 871604 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 871385 871602 . - . utg265_pilon exonerate:protein2genome:local exon 871385 871602 . - . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local splice5 871383 871384 . - . intron_id 2 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local intron 871352 871384 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 871352 871353 . - . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 871283 871351 . - . utg265_pilon exonerate:protein2genome:local exon 871283 871351 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 871283 872239 830 - . alignment_id 0 ; Query GL50803_137728-t26_1-p1 ; Align 872240 2 54 ; Align 872171 20 525 ; Align 871601 196 81 ; Align 871520 227 135 ; Align 871352 272 69 utg47_pilon exonerate:protein2genome:local gene 1786881 2029080 1243 + . gene_id 0 ; sequence GL50803_137729-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1786881 1787102 . + . utg47_pilon exonerate:protein2genome:local exon 1786881 1787102 . + . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local splice5 1787103 1787104 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1787103 1922168 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1922167 1922168 . + . intron_id 0 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1922169 1922881 . + . utg47_pilon exonerate:protein2genome:local exon 1922169 1922881 . + . insertions 9 ; deletions 2 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local splice5 1922882 1922883 . + . intron_id 2 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1922882 1962237 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1962236 1962237 . + . intron_id 1 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 1962238 1962312 . + . utg47_pilon exonerate:protein2genome:local exon 1962238 1962312 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1962313 1962314 . + . intron_id 3 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local intron 1962313 2028955 . + . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 2028954 2028955 . + . intron_id 2 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 2028956 2029080 . + . utg47_pilon exonerate:protein2genome:local exon 2028956 2029080 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1786881 2029080 1243 + . alignment_id 0 ; Query GL50803_137729-t26_1-p1 ; Align 1786881 23 105 ; Align 1786986 62 117 ; Align 1922169 101 252 ; Align 1922424 185 36 ; Align 1922463 197 24 ; Align 1922488 205 27 ; Align 1922518 214 180 ; Align 1922698 275 93 ; Align 1922791 307 90 ; Align 1962240 338 72 ; Align 2028958 363 123 utg349_pilon exonerate:protein2genome:local gene 1277916 1279280 1926 - . gene_id 0 ; sequence GL50803_137730-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1277916 1279280 . - . utg349_pilon exonerate:protein2genome:local exon 1277916 1279280 . - . insertions 9 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1277916 1279280 1926 - . alignment_id 0 ; Query GL50803_137730-t26_1-p1 ; Align 1279281 1 168 ; Align 1279104 57 1188 utg349_pilon exonerate:protein2genome:local gene 1272795 1275857 3441 + . gene_id 0 ; sequence GL50803_137731-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1272795 1275857 . + . utg349_pilon exonerate:protein2genome:local exon 1272795 1275857 . + . insertions 3 ; deletions 18 utg349_pilon exonerate:protein2genome:local similarity 1272795 1275857 3441 + . alignment_id 0 ; Query GL50803_137731-t26_1-p1 ; Align 1272795 1 546 ; Align 1273341 185 33 ; Align 1273374 197 132 ; Align 1273506 242 249 ; Align 1273758 325 78 ; Align 1273836 354 576 ; Align 1274412 550 576 ; Align 1274988 746 36 ; Align 1275024 759 753 ; Align 1275777 1011 36 ; Align 1275813 1024 45 utg308_pilon exonerate:protein2genome:local gene 42594 44948 878 + . gene_id 0 ; sequence GL50803_137732-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 42594 43753 . + . utg308_pilon exonerate:protein2genome:local exon 42594 43753 . + . insertions 45 ; deletions 5 utg308_pilon exonerate:protein2genome:local splice5 43754 43755 . + . intron_id 1 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 43754 44419 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 44418 44419 . + . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 44420 44948 . + . utg308_pilon exonerate:protein2genome:local exon 44420 44948 . + . insertions 3 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 42594 44948 878 + . alignment_id 0 ; Query GL50803_137732-t26_1-p1 ; Align 42594 8 111 ; Align 42705 46 153 ; Align 42858 98 123 ; Align 42987 139 138 ; Align 43128 185 60 ; Align 43188 206 42 ; Align 43230 221 60 ; Align 43293 241 69 ; Align 43365 264 24 ; Align 43392 272 60 ; Align 43461 292 60 ; Align 43524 312 93 ; Align 43617 344 51 ; Align 43677 361 63 ; Align 43746 382 6 ; Align 44421 385 75 ; Align 44496 413 210 ; Align 44709 483 240 utg349_pilon exonerate:protein2genome:local gene 1085095 1085985 1269 + . gene_id 0 ; sequence GL50803_137733-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1085095 1085985 . + . utg349_pilon exonerate:protein2genome:local exon 1085095 1085985 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1085095 1085985 1269 + . alignment_id 0 ; Query GL50803_137733-t26_1-p1 ; Align 1085095 1 891 utg349_pilon exonerate:protein2genome:local gene 1053121 1055100 2240 + . gene_id 0 ; sequence GL50803_137734-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1053121 1055100 . + . utg349_pilon exonerate:protein2genome:local exon 1053121 1055100 . + . insertions 27 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1053121 1055100 2240 + . alignment_id 0 ; Query GL50803_137734-t26_1-p1 ; Align 1053121 1 537 ; Align 1053670 180 981 ; Align 1054666 507 435 utg265_pilon exonerate:protein2genome:local gene 871616 872395 837 - . gene_id 0 ; sequence GL50803_137735-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 871616 872395 . - . utg265_pilon exonerate:protein2genome:local exon 871616 872395 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 871616 872395 837 - . alignment_id 0 ; Query GL50803_137735-t26_1-p1 ; Align 872396 13 780 utg349_pilon exonerate:protein2genome:local gene 889432 890670 1503 - . gene_id 0 ; sequence GL50803_137736-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 889432 890670 . - . utg349_pilon exonerate:protein2genome:local exon 889432 890670 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 889432 890670 1503 - . alignment_id 0 ; Query GL50803_137736-t26_1-p1 ; Align 890671 1 1239 utg265_pilon exonerate:protein2genome:local gene 871454 884598 760 - . gene_id 0 ; sequence GL50803_137737-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 884525 884598 . - . utg265_pilon exonerate:protein2genome:local exon 884525 884598 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 884523 884524 . - . intron_id 1 ; splice_site "CA" utg265_pilon exonerate:protein2genome:local intron 872169 884524 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 872169 872170 . - . intron_id 0 ; splice_site "AA" utg265_pilon exonerate:protein2genome:local cds 871645 872168 . - . utg265_pilon exonerate:protein2genome:local exon 871645 872168 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 871643 871644 . - . intron_id 2 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 871603 871644 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 871603 871604 . - . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 871454 871602 . - . utg265_pilon exonerate:protein2genome:local exon 871454 871602 . - . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 871454 884598 760 - . alignment_id 0 ; Query GL50803_137737-t26_1-p1 ; Align 884599 1 72 ; Align 872168 26 522 ; Align 871601 201 81 ; Align 871520 232 66 utg349_pilon exonerate:protein2genome:local gene 444632 448639 4032 + . gene_id 0 ; sequence GL50803_137739-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 444632 447455 . + . utg349_pilon exonerate:protein2genome:local exon 444632 447455 . + . insertions 0 ; deletions 7 utg349_pilon exonerate:protein2genome:local splice5 447456 447457 . + . intron_id 1 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 447456 447491 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 447490 447491 . + . intron_id 0 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 447492 448639 . + . utg349_pilon exonerate:protein2genome:local exon 447492 448639 . + . insertions 0 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 444632 448639 4032 + . alignment_id 0 ; Query GL50803_137739-t26_1-p1 ; Align 444632 1 1074 ; Align 445706 360 1305 ; Align 447011 800 147 ; Align 447158 850 297 ; Align 447494 950 288 ; Align 447782 1047 114 ; Align 447896 1087 309 ; Align 448205 1191 435 utg47_pilon exonerate:protein2genome:local gene 203594 204475 1141 + . gene_id 0 ; sequence GL50803_13774-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 203594 204475 . + . utg47_pilon exonerate:protein2genome:local exon 203594 204475 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 203594 204475 1141 + . alignment_id 0 ; Query GL50803_13774-t26_1-p1 ; Align 203594 1 882 utg47_pilon exonerate:protein2genome:local gene 487572 557396 1335 - . gene_id 0 ; sequence GL50803_137740-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 556480 557396 . - . utg47_pilon exonerate:protein2genome:local exon 556480 557396 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local splice5 556478 556479 . - . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 487680 556479 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 487680 487681 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 487572 487679 . - . utg47_pilon exonerate:protein2genome:local exon 487572 487679 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 487572 557396 1335 - . alignment_id 0 ; Query GL50803_137740-t26_1-p1 ; Align 557397 110 387 ; Align 557008 240 528 ; Align 487680 416 108 utg265_pilon exonerate:protein2genome:local gene 870986 884748 1227 - . gene_id 0 ; sequence GL50803_137742-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 884538 884748 . - . utg265_pilon exonerate:protein2genome:local exon 884538 884748 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 884536 884537 . - . intron_id 1 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 872182 884537 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 872182 872183 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 871645 872181 . - . utg265_pilon exonerate:protein2genome:local exon 871645 872181 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 871643 871644 . - . intron_id 2 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 871603 871644 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 871603 871604 . - . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 870986 871602 . - . utg265_pilon exonerate:protein2genome:local exon 870986 871602 . - . insertions 9 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 870986 884748 1227 - . alignment_id 0 ; Query GL50803_137742-t26_1-p1 ; Align 884749 9 210 ; Align 872180 80 534 ; Align 871601 259 81 ; Align 871520 290 393 ; Align 871118 421 132 utg265_pilon exonerate:protein2genome:local gene 870986 884748 1227 - . gene_id 0 ; sequence GL50803_137743-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 884538 884748 . - . utg265_pilon exonerate:protein2genome:local exon 884538 884748 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 884536 884537 . - . intron_id 1 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 872182 884537 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 872182 872183 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 871645 872181 . - . utg265_pilon exonerate:protein2genome:local exon 871645 872181 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 871643 871644 . - . intron_id 2 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 871603 871644 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 871603 871604 . - . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 870986 871602 . - . utg265_pilon exonerate:protein2genome:local exon 870986 871602 . - . insertions 9 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 870986 884748 1227 - . alignment_id 0 ; Query GL50803_137743-t26_1-p1 ; Align 884749 9 210 ; Align 872180 80 534 ; Align 871601 259 81 ; Align 871520 290 393 ; Align 871118 421 132 utg731_pilon exonerate:protein2genome:local gene 334197 334844 524 - . gene_id 0 ; sequence GL50803_137744-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 334197 334844 . - . utg731_pilon exonerate:protein2genome:local exon 334197 334844 . - . insertions 0 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 334197 334844 524 - . alignment_id 0 ; Query GL50803_137744-t26_1-p1 ; Align 334845 28 174 ; Align 334671 87 117 ; Align 334554 127 117 ; Align 334437 167 138 ; Align 334299 214 102 utg731_pilon exonerate:protein2genome:local gene 974155 977844 4874 - . gene_id 0 ; sequence GL50803_137745-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 974155 977844 . - . utg731_pilon exonerate:protein2genome:local exon 974155 977844 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 974155 977844 4874 - . alignment_id 0 ; Query GL50803_137745-t26_1-p1 ; Align 977845 1 1659 ; Align 976186 555 2031 utg731_pilon exonerate:protein2genome:local gene 881842 883491 2274 + . gene_id 0 ; sequence GL50803_137746-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 881842 883491 . + . utg731_pilon exonerate:protein2genome:local exon 881842 883491 . + . insertions 0 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 881842 883491 2274 + . alignment_id 0 ; Query GL50803_137746-t26_1-p1 ; Align 881842 1 354 ; Align 882196 120 699 ; Align 882895 356 435 ; Align 883330 502 162 utg731_pilon exonerate:protein2genome:local gene 876196 879432 4396 + . gene_id 0 ; sequence GL50803_137747-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 876196 879432 . + . utg731_pilon exonerate:protein2genome:local exon 876196 879432 . + . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 876196 879432 4396 + . alignment_id 0 ; Query GL50803_137747-t26_1-p1 ; Align 876196 6 2202 ; Align 878398 743 1035 utg731_pilon exonerate:protein2genome:local gene 841941 848684 9358 - . gene_id 0 ; sequence GL50803_137748-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 841941 848684 . - . utg731_pilon exonerate:protein2genome:local exon 841941 848684 . - . insertions 9 ; deletions 6 utg731_pilon exonerate:protein2genome:local similarity 841941 848684 9358 - . alignment_id 0 ; Query GL50803_137748-t26_1-p1 ; Align 848685 1 93 ; Align 848592 33 45 ; Align 848547 49 966 ; Align 847581 372 291 ; Align 847287 469 411 ; Align 846876 607 1527 ; Align 845349 1117 600 ; Align 844749 1318 681 ; Align 844062 1545 2121 utg731_pilon exonerate:protein2genome:local gene 717574 722349 6680 + . gene_id 0 ; sequence GL50803_137749-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 717574 720235 . + . utg731_pilon exonerate:protein2genome:local exon 717574 720235 . + . insertions 6 ; deletions 2 utg731_pilon exonerate:protein2genome:local splice5 720236 720237 . + . intron_id 1 ; splice_site "TA" utg731_pilon exonerate:protein2genome:local intron 720236 720280 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 720279 720280 . + . intron_id 0 ; splice_site "TG" utg731_pilon exonerate:protein2genome:local cds 720281 722349 . + . utg731_pilon exonerate:protein2genome:local exon 720281 722349 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 717574 722349 6680 + . alignment_id 0 ; Query GL50803_137749-t26_1-p1 ; Align 717574 1 1353 ; Align 718930 452 1062 ; Align 719995 806 129 ; Align 720124 850 60 ; Align 720184 871 51 ; Align 720283 889 2067 utg11_pilon exonerate:protein2genome:local gene 1488402 1488653 403 - . gene_id 0 ; sequence GL50803_13775-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1488402 1488653 . - . utg11_pilon exonerate:protein2genome:local exon 1488402 1488653 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1488402 1488653 403 - . alignment_id 0 ; Query GL50803_13775-t26_1-p1 ; Align 1488654 1 252 utg731_pilon exonerate:protein2genome:local gene 583133 586038 3421 - . gene_id 0 ; sequence GL50803_137750-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 583133 586038 . - . utg731_pilon exonerate:protein2genome:local exon 583133 586038 . - . insertions 0 ; deletions 8 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 583133 586038 3421 - . alignment_id 0 ; Query GL50803_137750-t26_1-p1 ; Align 586039 1 981 ; Align 585058 331 39 ; Align 585019 345 294 ; Align 584725 446 1155 ; Align 583568 832 435 utg731_pilon exonerate:protein2genome:local gene 489454 491166 1548 - . gene_id 0 ; sequence GL50803_137751-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 489454 491166 . - . utg731_pilon exonerate:protein2genome:local exon 489454 491166 . - . insertions 3 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 489454 491166 1548 - . alignment_id 0 ; Query GL50803_137751-t26_1-p1 ; Align 491167 36 207 ; Align 490960 107 165 ; Align 490795 163 261 ; Align 490531 250 1077 utg731_pilon exonerate:protein2genome:local gene 959847 1633289 1094 + . gene_id 0 ; sequence GL50803_137752-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 959847 960095 . + . utg731_pilon exonerate:protein2genome:local exon 959847 960095 . + . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 960096 960097 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 960096 960173 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 960172 960173 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 960174 960340 . + . utg731_pilon exonerate:protein2genome:local exon 960174 960340 . + . insertions 3 ; deletions 1 utg731_pilon exonerate:protein2genome:local splice5 960341 960342 . + . intron_id 2 ; splice_site "CT" utg731_pilon exonerate:protein2genome:local intron 960341 1070154 . + . intron_id 2 utg731_pilon exonerate:protein2genome:local splice3 1070153 1070154 . + . intron_id 1 ; splice_site "AC" utg731_pilon exonerate:protein2genome:local cds 1070155 1070357 . + . utg731_pilon exonerate:protein2genome:local exon 1070155 1070357 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local splice5 1070358 1070359 . + . intron_id 3 ; splice_site "GC" utg731_pilon exonerate:protein2genome:local intron 1070358 1107661 . + . intron_id 3 utg731_pilon exonerate:protein2genome:local splice3 1107660 1107661 . + . intron_id 2 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1107662 1107859 . + . utg731_pilon exonerate:protein2genome:local exon 1107662 1107859 . + . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1107860 1107861 . + . intron_id 4 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local intron 1107860 1175828 . + . intron_id 4 utg731_pilon exonerate:protein2genome:local splice3 1175827 1175828 . + . intron_id 3 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1175829 1176068 . + . utg731_pilon exonerate:protein2genome:local exon 1175829 1176068 . + . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local splice5 1176069 1176070 . + . intron_id 5 ; splice_site "AC" utg731_pilon exonerate:protein2genome:local intron 1176069 1182903 . + . intron_id 5 utg731_pilon exonerate:protein2genome:local splice3 1182902 1182903 . + . intron_id 4 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1182904 1183263 . + . utg731_pilon exonerate:protein2genome:local exon 1182904 1183263 . + . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local splice5 1183264 1183265 . + . intron_id 6 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1183264 1326551 . + . intron_id 6 utg731_pilon exonerate:protein2genome:local splice3 1326550 1326551 . + . intron_id 5 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local cds 1326552 1326694 . + . utg731_pilon exonerate:protein2genome:local exon 1326552 1326694 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1326695 1326696 . + . intron_id 7 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1326695 1426252 . + . intron_id 7 utg731_pilon exonerate:protein2genome:local splice3 1426251 1426252 . + . intron_id 6 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1426253 1426379 . + . utg731_pilon exonerate:protein2genome:local exon 1426253 1426379 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local splice5 1426380 1426381 . + . intron_id 8 ; splice_site "CT" utg731_pilon exonerate:protein2genome:local intron 1426380 1428294 . + . intron_id 8 utg731_pilon exonerate:protein2genome:local splice3 1428293 1428294 . + . intron_id 7 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1428295 1428493 . + . utg731_pilon exonerate:protein2genome:local exon 1428295 1428493 . + . insertions 3 ; deletions 6 utg731_pilon exonerate:protein2genome:local splice5 1428494 1428495 . + . intron_id 9 ; splice_site "GG" utg731_pilon exonerate:protein2genome:local intron 1428494 1481573 . + . intron_id 9 utg731_pilon exonerate:protein2genome:local splice3 1481572 1481573 . + . intron_id 8 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1481574 1481671 . + . utg731_pilon exonerate:protein2genome:local exon 1481574 1481671 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1481672 1481673 . + . intron_id 10 ; splice_site "GC" utg731_pilon exonerate:protein2genome:local intron 1481672 1632528 . + . intron_id 10 utg731_pilon exonerate:protein2genome:local splice3 1632527 1632528 . + . intron_id 9 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1632529 1633289 . + . utg731_pilon exonerate:protein2genome:local exon 1632529 1633289 . + . insertions 21 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 959847 1633289 1094 + . alignment_id 0 ; Query GL50803_137752-t26_1-p1 ; Align 959847 117 39 ; Align 959889 130 30 ; Align 959922 140 174 ; Align 960174 198 27 ; Align 960204 207 123 ; Align 960327 249 12 ; Align 1070156 254 66 ; Align 1070222 277 72 ; Align 1070294 302 63 ; Align 1107664 324 24 ; Align 1107691 332 147 ; Align 1107841 381 18 ; Align 1175831 388 24 ; Align 1175855 398 84 ; Align 1175939 427 129 ; Align 1182906 471 129 ; Align 1183035 515 117 ; Align 1183152 556 111 ; Align 1326554 594 141 ; Align 1426253 641 66 ; Align 1426319 664 60 ; Align 1428297 685 33 ; Align 1428330 698 27 ; Align 1428357 708 75 ; Align 1428432 734 18 ; Align 1428450 742 30 ; Align 1428483 752 9 ; Align 1481575 756 96 ; Align 1632531 789 54 ; Align 1632588 807 150 ; Align 1632741 857 129 ; Align 1632873 900 105 ; Align 1632984 935 123 ; Align 1633107 977 39 ; Align 1633152 990 138 utg18_pilon exonerate:protein2genome:local gene 157058 161107 4873 + . gene_id 0 ; sequence GL50803_137753-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 157058 161107 . + . utg18_pilon exonerate:protein2genome:local exon 157058 161107 . + . insertions 18 ; deletions 5 utg18_pilon exonerate:protein2genome:local similarity 157058 161107 4873 + . alignment_id 0 ; Query GL50803_137753-t26_1-p1 ; Align 157058 95 390 ; Align 157451 225 174 ; Align 157628 283 51 ; Align 157682 300 123 ; Align 157805 345 2277 ; Align 160082 1105 804 ; Align 160895 1373 213 utg18_pilon exonerate:protein2genome:local gene 140769 143606 4399 + . gene_id 0 ; sequence GL50803_137754-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 140769 143606 . + . utg18_pilon exonerate:protein2genome:local exon 140769 143606 . + . insertions 0 ; deletions 4 utg18_pilon exonerate:protein2genome:local similarity 140769 143606 4399 + . alignment_id 0 ; Query GL50803_137754-t26_1-p1 ; Align 140769 1 1182 ; Align 141951 399 1656 utg18_pilon exonerate:protein2genome:local gene 353788 356730 3599 + . gene_id 0 ; sequence GL50803_137755-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 353788 356730 . + . utg18_pilon exonerate:protein2genome:local exon 353788 356730 . + . insertions 3 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 353788 356730 3599 + . alignment_id 0 ; Query GL50803_137755-t26_1-p1 ; Align 353788 5 720 ; Align 354508 246 1158 ; Align 355666 633 756 ; Align 356425 885 306 utg265_pilon exonerate:protein2genome:local gene 870677 871510 547 + . gene_id 0 ; sequence GL50803_137759-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 870677 871510 . + . utg265_pilon exonerate:protein2genome:local exon 870677 871510 . + . insertions 9 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 870677 871510 547 + . alignment_id 0 ; Query GL50803_137759-t26_1-p1 ; Align 870677 1 438 ; Align 871124 147 387 utg11_pilon exonerate:protein2genome:local gene 1487223 1488445 1362 - . gene_id 0 ; sequence GL50803_13776-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1487223 1488445 . - . utg11_pilon exonerate:protein2genome:local exon 1487223 1488445 . - . insertions 3 ; deletions 0 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 1487223 1488445 1362 - . alignment_id 0 ; Query GL50803_13776-t26_1-p1 ; Align 1488446 1 54 ; Align 1488390 19 213 ; Align 1488174 90 951 utg11_pilon exonerate:protein2genome:local gene 220186 398120 516 + . gene_id 0 ; sequence GL50803_137761-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 220186 220307 . + . utg11_pilon exonerate:protein2genome:local exon 220186 220307 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 220308 220309 . + . intron_id 1 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 220308 389987 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 389986 389987 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 389988 390223 . + . utg11_pilon exonerate:protein2genome:local exon 389988 390223 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 390224 390225 . + . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 390224 398001 . + . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 398000 398001 . + . intron_id 1 ; splice_site "CA" utg11_pilon exonerate:protein2genome:local cds 398002 398120 . + . utg11_pilon exonerate:protein2genome:local exon 398002 398120 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 220186 398120 516 + . alignment_id 0 ; Query GL50803_137761-t26_1-p1 ; Align 220186 6 120 ; Align 389989 47 234 ; Align 398004 126 117 utg11_pilon exonerate:protein2genome:local gene 1485073 1487211 2536 - . gene_id 0 ; sequence GL50803_13777-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1485073 1487211 . - . utg11_pilon exonerate:protein2genome:local exon 1485073 1487211 . - . insertions 3 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1485073 1487211 2536 - . alignment_id 0 ; Query GL50803_13777-t26_1-p1 ; Align 1487212 1 1059 ; Align 1486153 356 132 ; Align 1486018 400 945 utg212_pilon exonerate:protein2genome:local gene 475414 476515 1192 - . gene_id 0 ; sequence GL50803_13783-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 475414 476515 . - . utg212_pilon exonerate:protein2genome:local exon 475414 476515 . - . insertions 0 ; deletions 2 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 475414 476515 1192 - . alignment_id 0 ; Query GL50803_13783-t26_1-p1 ; Align 476516 24 120 ; Align 476396 66 33 ; Align 476362 77 948 utg364_pilon exonerate:protein2genome:local gene 48189 48737 807 + . gene_id 0 ; sequence GL50803_13787-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 48189 48737 . + . utg364_pilon exonerate:protein2genome:local exon 48189 48737 . + . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 48189 48737 807 + . alignment_id 0 ; Query GL50803_13787-t26_1-p1 ; Align 48189 1 549 utg308_pilon exonerate:protein2genome:local gene 17526 21290 5431 + . gene_id 0 ; sequence GL50803_13790-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 17526 21290 . + . utg308_pilon exonerate:protein2genome:local exon 17526 21290 . + . insertions 6 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 17526 21290 5431 + . alignment_id 0 ; Query GL50803_13790-t26_1-p1 ; Align 17526 1 507 ; Align 18036 170 849 ; Align 18888 453 516 ; Align 19404 626 1887 utg308_pilon exonerate:protein2genome:local gene 15549 17423 2961 - . gene_id 0 ; sequence GL50803_13791-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 15549 17423 . - . utg308_pilon exonerate:protein2genome:local exon 15549 17423 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 15549 17423 2961 - . alignment_id 0 ; Query GL50803_13791-t26_1-p1 ; Align 17424 1 1875 utg99_pilon exonerate:protein2genome:local gene 343041 346334 3701 - . gene_id 0 ; sequence GL50803_13797-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 346065 346334 . - . utg99_pilon exonerate:protein2genome:local exon 346065 346334 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 346063 346064 . - . intron_id 1 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 346017 346064 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 346017 346018 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 344865 346016 . - . utg99_pilon exonerate:protein2genome:local exon 344865 346016 . - . insertions 12 ; deletions 7 utg99_pilon exonerate:protein2genome:local splice5 344863 344864 . - . intron_id 2 ; splice_site "GG" utg99_pilon exonerate:protein2genome:local intron 344826 344864 . - . intron_id 2 utg99_pilon exonerate:protein2genome:local splice3 344826 344827 . - . intron_id 1 ; splice_site "AA" utg99_pilon exonerate:protein2genome:local cds 343041 344825 . - . utg99_pilon exonerate:protein2genome:local exon 343041 344825 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 343041 346334 3701 - . alignment_id 0 ; Query GL50803_13797-t26_1-p1 ; Align 346335 101 270 ; Align 346017 191 15 ; Align 345999 196 21 ; Align 345978 204 159 ; Align 345819 258 129 ; Align 345690 305 60 ; Align 345630 326 291 ; Align 345336 423 66 ; Align 345264 445 399 ; Align 344826 578 1785 utg731_pilon exonerate:protein2genome:local gene 292661 294436 1716 + . gene_id 0 ; sequence GL50803_13800-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 292661 294436 . + . utg731_pilon exonerate:protein2genome:local exon 292661 294436 . + . insertions 0 ; deletions 7 utg731_pilon exonerate:protein2genome:local similarity 292661 294436 1716 + . alignment_id 0 ; Query GL50803_13800-t26_1-p1 ; Align 292661 2 711 ; Align 293372 243 231 ; Align 293603 322 387 ; Align 293990 452 447 utg212_pilon exonerate:protein2genome:local gene 615741 616724 1316 + . gene_id 0 ; sequence GL50803_13809-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 615741 616724 . + . utg212_pilon exonerate:protein2genome:local exon 615741 616724 . + . insertions 0 ; deletions 5 utg212_pilon exonerate:protein2genome:local similarity 615741 616724 1316 + . alignment_id 0 ; Query GL50803_13809-t26_1-p1 ; Align 615741 1 243 ; Align 615984 84 99 ; Align 616083 120 642 utg731_pilon exonerate:protein2genome:local gene 118702 121668 4436 + . gene_id 0 ; sequence GL50803_13825-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 118702 120676 . + . utg731_pilon exonerate:protein2genome:local exon 118702 120676 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 120677 120678 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 120677 120706 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 120705 120706 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 120707 121668 . + . utg731_pilon exonerate:protein2genome:local exon 120707 121668 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 118702 121668 4436 + . alignment_id 0 ; Query GL50803_13825-t26_1-p1 ; Align 118702 1 1974 ; Align 120709 660 960 utg308_pilon exonerate:protein2genome:local gene 772138 772542 603 + . gene_id 0 ; sequence GL50803_1383-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 772138 772542 . + . utg308_pilon exonerate:protein2genome:local exon 772138 772542 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 772138 772542 603 + . alignment_id 0 ; Query GL50803_1383-t26_1-p1 ; Align 772138 1 405 utg18_pilon exonerate:protein2genome:local gene 262505 263044 823 + . gene_id 0 ; sequence GL50803_13832-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 262505 263044 . + . utg18_pilon exonerate:protein2genome:local exon 262505 263044 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 262505 263044 823 + . alignment_id 0 ; Query GL50803_13832-t26_1-p1 ; Align 262505 1 540 utg47_pilon exonerate:protein2genome:local gene 2180465 2182198 2511 - . gene_id 0 ; sequence GL50803_13836-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2180465 2182198 . - . utg47_pilon exonerate:protein2genome:local exon 2180465 2182198 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2180465 2182198 2511 - . alignment_id 0 ; Query GL50803_13836-t26_1-p1 ; Align 2182199 1 1734 utg47_pilon exonerate:protein2genome:local gene 2177968 2179101 1654 - . gene_id 0 ; sequence GL50803_13838-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2177968 2179101 . - . utg47_pilon exonerate:protein2genome:local exon 2177968 2179101 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 2177968 2179101 1654 - . alignment_id 0 ; Query GL50803_13838-t26_1-p1 ; Align 2179102 1 420 ; Align 2178682 143 714 utg99_pilon exonerate:protein2genome:local gene 189504 189689 114 + . gene_id 0 ; sequence GL50803_13841-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 189504 189689 . + . utg99_pilon exonerate:protein2genome:local exon 189504 189689 . + . insertions 0 ; deletions 4 utg99_pilon exonerate:protein2genome:local similarity 189504 189689 114 + . alignment_id 0 ; Query GL50803_13841-t26_1-p1 ; Align 189504 1 90 ; Align 189594 35 96 utg349_pilon exonerate:protein2genome:local gene 489284 491119 2238 - . gene_id 0 ; sequence GL50803_13844-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 489284 491119 . - . utg349_pilon exonerate:protein2genome:local exon 489284 491119 . - . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 489284 491119 2238 - . alignment_id 0 ; Query GL50803_13844-t26_1-p1 ; Align 491120 1 417 ; Align 490703 141 771 ; Align 489932 399 648 utg18_pilon exonerate:protein2genome:local gene 376382 377080 1106 + . gene_id 0 ; sequence GL50803_13851-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 376382 377080 . + . utg18_pilon exonerate:protein2genome:local exon 376382 377080 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 376382 377080 1106 + . alignment_id 0 ; Query GL50803_13851-t26_1-p1 ; Align 376382 1 699 utg18_pilon exonerate:protein2genome:local gene 374476 376338 2724 + . gene_id 0 ; sequence GL50803_13852-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 374476 376338 . + . utg18_pilon exonerate:protein2genome:local exon 374476 376338 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 374476 376338 2724 + . alignment_id 0 ; Query GL50803_13852-t26_1-p1 ; Align 374476 1 1863 utg11_pilon exonerate:protein2genome:local gene 680330 681616 1600 + . gene_id 0 ; sequence GL50803_13857-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 680330 681616 . + . utg11_pilon exonerate:protein2genome:local exon 680330 681616 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 680330 681616 1600 + . alignment_id 0 ; Query GL50803_13857-t26_1-p1 ; Align 680330 1 1287 utg47_pilon exonerate:protein2genome:local gene 938672 939571 1237 - . gene_id 0 ; sequence GL50803_13863-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 938672 939571 . - . utg47_pilon exonerate:protein2genome:local exon 938672 939571 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 938672 939571 1237 - . alignment_id 0 ; Query GL50803_13863-t26_1-p1 ; Align 939572 1 900 utg47_pilon exonerate:protein2genome:local gene 934190 935161 1648 + . gene_id 0 ; sequence GL50803_13864-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 934190 935161 . + . utg47_pilon exonerate:protein2genome:local exon 934190 935161 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 934190 935161 1648 + . alignment_id 0 ; Query GL50803_13864-t26_1-p1 ; Align 934190 1 972 utg308_pilon exonerate:protein2genome:local gene 381411 381911 789 + . gene_id 0 ; sequence GL50803_13874-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 381411 381911 . + . utg308_pilon exonerate:protein2genome:local exon 381411 381911 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 381411 381911 789 + . alignment_id 0 ; Query GL50803_13874-t26_1-p1 ; Align 381411 1 501 utg308_pilon exonerate:protein2genome:local gene 382039 385108 4941 + . gene_id 0 ; sequence GL50803_13875-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 382039 385108 . + . utg308_pilon exonerate:protein2genome:local exon 382039 385108 . + . insertions 0 ; deletions 2 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 382039 385108 4941 + . alignment_id 0 ; Query GL50803_13875-t26_1-p1 ; Align 382039 1 507 ; Align 382547 170 585 ; Align 383132 366 21 ; Align 383153 374 1956 utg308_pilon exonerate:protein2genome:local gene 385539 386513 1478 + . gene_id 0 ; sequence GL50803_13876-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 385539 386513 . + . utg308_pilon exonerate:protein2genome:local exon 385539 386513 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 385539 386513 1478 + . alignment_id 0 ; Query GL50803_13876-t26_1-p1 ; Align 385539 1 975 utg212_pilon exonerate:protein2genome:local gene 206971 207432 710 - . gene_id 0 ; sequence GL50803_13878-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 206971 207432 . - . utg212_pilon exonerate:protein2genome:local exon 206971 207432 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 206971 207432 710 - . alignment_id 0 ; Query GL50803_13878-t26_1-p1 ; Align 207433 1 462 utg11_pilon exonerate:protein2genome:local gene 122642 123919 1208 + . gene_id 0 ; sequence GL50803_13882-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 122642 123919 . + . utg11_pilon exonerate:protein2genome:local exon 122642 123919 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 122642 123919 1208 + . alignment_id 0 ; Query GL50803_13882-t26_1-p1 ; Align 122642 290 1278 utg265_pilon exonerate:protein2genome:local gene 106737 108492 2166 + . gene_id 0 ; sequence GL50803_13886-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 106737 108492 . + . utg265_pilon exonerate:protein2genome:local exon 106737 108492 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 106737 108492 2166 + . alignment_id 0 ; Query GL50803_13886-t26_1-p1 ; Align 106737 1 510 ; Align 107248 171 1245 utg308_pilon exonerate:protein2genome:local gene 564531 565109 804 - . gene_id 0 ; sequence GL50803_13889-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 564531 565109 . - . utg308_pilon exonerate:protein2genome:local exon 564531 565109 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 564531 565109 804 - . alignment_id 0 ; Query GL50803_13889-t26_1-p1 ; Align 565110 1 579 utg11_pilon exonerate:protein2genome:local gene 998836 999831 1416 - . gene_id 0 ; sequence GL50803_13890-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 998836 999831 . - . utg11_pilon exonerate:protein2genome:local exon 998836 999831 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 998836 999831 1416 - . alignment_id 0 ; Query GL50803_13890-t26_1-p1 ; Align 999832 4 996 utg99_pilon exonerate:protein2genome:local gene 167776 168786 1371 + . gene_id 0 ; sequence GL50803_13896-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 167776 168786 . + . utg99_pilon exonerate:protein2genome:local exon 167776 168786 . + . insertions 0 ; deletions 2 utg99_pilon exonerate:protein2genome:local similarity 167776 168786 1371 + . alignment_id 0 ; Query GL50803_13896-t26_1-p1 ; Align 167776 1 246 ; Align 168022 85 765 utg212_pilon exonerate:protein2genome:local gene 335164 335877 1058 - . gene_id 0 ; sequence GL50803_13897-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 335164 335877 . - . utg212_pilon exonerate:protein2genome:local exon 335164 335877 . - . insertions 0 ; deletions 0 ; frameshifts 3 utg212_pilon exonerate:protein2genome:local similarity 335164 335877 1058 - . alignment_id 0 ; Query GL50803_13897-t26_1-p1 ; Align 335878 1 135 ; Align 335741 46 201 ; Align 335539 113 375 utg47_pilon exonerate:protein2genome:local gene 768400 771012 3526 - . gene_id 0 ; sequence GL50803_13901-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 768400 771012 . - . utg47_pilon exonerate:protein2genome:local exon 768400 771012 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 768400 771012 3526 - . alignment_id 0 ; Query GL50803_13901-t26_1-p1 ; Align 771013 1 2613 utg47_pilon exonerate:protein2genome:local gene 1736730 1738910 2741 - . gene_id 0 ; sequence GL50803_13903-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1736730 1738910 . - . utg47_pilon exonerate:protein2genome:local exon 1736730 1738910 . - . insertions 12 ; deletions 10 utg47_pilon exonerate:protein2genome:local similarity 1736730 1738910 2741 - . alignment_id 0 ; Query GL50803_13903-t26_1-p1 ; Align 1738911 1 675 ; Align 1738236 229 213 ; Align 1738023 301 141 ; Align 1737876 348 90 ; Align 1737786 379 399 ; Align 1737387 514 81 ; Align 1737306 544 102 ; Align 1737198 578 468 utg47_pilon exonerate:protein2genome:local gene 1736207 1736689 680 + . gene_id 0 ; sequence GL50803_13904-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1736207 1736689 . + . utg47_pilon exonerate:protein2genome:local exon 1736207 1736689 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1736207 1736689 680 + . alignment_id 0 ; Query GL50803_13904-t26_1-p1 ; Align 1736207 13 483 utg11_pilon exonerate:protein2genome:local gene 1693132 1694281 1757 - . gene_id 0 ; sequence GL50803_13914-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1693132 1694281 . - . utg11_pilon exonerate:protein2genome:local exon 1693132 1694281 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 1693132 1694281 1757 - . alignment_id 0 ; Query GL50803_13914-t26_1-p1 ; Align 1694282 350 225 ; Align 1694056 425 924 utg308_pilon exonerate:protein2genome:local gene 710844 712007 1653 + . gene_id 0 ; sequence GL50803_13921-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 710844 712007 . + . utg308_pilon exonerate:protein2genome:local exon 710844 712007 . + . insertions 9 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 710844 712007 1653 + . alignment_id 0 ; Query GL50803_13921-t26_1-p1 ; Align 710844 1 855 ; Align 711702 286 126 ; Align 711834 328 174 utg308_pilon exonerate:protein2genome:local gene 712103 715360 4684 - . gene_id 0 ; sequence GL50803_13922-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 712103 715360 . - . utg308_pilon exonerate:protein2genome:local exon 712103 715360 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 712103 715360 4684 - . alignment_id 0 ; Query GL50803_13922-t26_1-p1 ; Align 715361 1 3162 ; Align 712199 1056 96 utg308_pilon exonerate:protein2genome:local gene 719046 719648 851 - . gene_id 0 ; sequence GL50803_13924-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 719046 719648 . - . utg308_pilon exonerate:protein2genome:local exon 719046 719648 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 719046 719648 851 - . alignment_id 0 ; Query GL50803_13924-t26_1-p1 ; Align 719649 10 603 utg47_pilon exonerate:protein2genome:local gene 2161342 2161785 679 - . gene_id 0 ; sequence GL50803_13926-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2161342 2161785 . - . utg47_pilon exonerate:protein2genome:local exon 2161342 2161785 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2161342 2161785 679 - . alignment_id 0 ; Query GL50803_13926-t26_1-p1 ; Align 2161786 24 444 utg47_pilon exonerate:protein2genome:local gene 2154795 2155355 894 + . gene_id 0 ; sequence GL50803_13930-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2154795 2155355 . + . utg47_pilon exonerate:protein2genome:local exon 2154795 2155355 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2154795 2155355 894 + . alignment_id 0 ; Query GL50803_13930-t26_1-p1 ; Align 2154795 1 561 utg265_pilon exonerate:protein2genome:local gene 484030 484800 1026 - . gene_id 0 ; sequence GL50803_13940-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 484030 484800 . - . utg265_pilon exonerate:protein2genome:local exon 484030 484800 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 484030 484800 1026 - . alignment_id 0 ; Query GL50803_13940-t26_1-p1 ; Align 484801 14 771 utg265_pilon exonerate:protein2genome:local gene 484851 485798 1348 - . gene_id 0 ; sequence GL50803_13941-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 484851 485798 . - . utg265_pilon exonerate:protein2genome:local exon 484851 485798 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 484851 485798 1348 - . alignment_id 0 ; Query GL50803_13941-t26_1-p1 ; Align 485799 1 948 utg265_pilon exonerate:protein2genome:local gene 486030 487526 2154 - . gene_id 0 ; sequence GL50803_13942-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 486030 487526 . - . utg265_pilon exonerate:protein2genome:local exon 486030 487526 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 486030 487526 2154 - . alignment_id 0 ; Query GL50803_13942-t26_1-p1 ; Align 487527 1 1497 utg265_pilon exonerate:protein2genome:local gene 487624 488625 1601 - . gene_id 0 ; sequence GL50803_13943-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 487624 488625 . - . utg265_pilon exonerate:protein2genome:local exon 487624 488625 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 487624 488625 1601 - . alignment_id 0 ; Query GL50803_13943-t26_1-p1 ; Align 488626 1 1002 utg265_pilon exonerate:protein2genome:local gene 490147 491172 1280 - . gene_id 0 ; sequence GL50803_13945-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 490147 491172 . - . utg265_pilon exonerate:protein2genome:local exon 490147 491172 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 490147 491172 1280 - . alignment_id 0 ; Query GL50803_13945-t26_1-p1 ; Align 491173 1 267 ; Align 490906 91 759 utg265_pilon exonerate:protein2genome:local gene 632620 633981 1689 - . gene_id 0 ; sequence GL50803_13947-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 632620 633981 . - . utg265_pilon exonerate:protein2genome:local exon 632620 633981 . - . insertions 0 ; deletions 5 utg265_pilon exonerate:protein2genome:local similarity 632620 633981 1689 - . alignment_id 0 ; Query GL50803_13947-t26_1-p1 ; Align 633982 1 792 ; Align 633190 268 15 ; Align 633175 275 555 utg265_pilon exonerate:protein2genome:local gene 637599 638543 1212 + . gene_id 0 ; sequence GL50803_13948-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 637599 638543 . + . utg265_pilon exonerate:protein2genome:local exon 637599 638543 . + . insertions 6 ; deletions 6 utg265_pilon exonerate:protein2genome:local similarity 637599 638543 1212 + . alignment_id 0 ; Query GL50803_13948-t26_1-p1 ; Align 637599 1 657 ; Align 638256 221 45 ; Align 638301 241 126 ; Align 638433 283 111 utg18_pilon exonerate:protein2genome:local gene 59099 60559 1850 + . gene_id 0 ; sequence GL50803_13962-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 59099 60559 . + . utg18_pilon exonerate:protein2genome:local exon 59099 60559 . + . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 59099 60559 1850 + . alignment_id 0 ; Query GL50803_13962-t26_1-p1 ; Align 59099 1 450 ; Align 59549 152 606 ; Align 60155 355 405 utg18_pilon exonerate:protein2genome:local gene 64372 65508 1613 + . gene_id 0 ; sequence GL50803_13963-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 64372 65508 . + . utg18_pilon exonerate:protein2genome:local exon 64372 65508 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 64372 65508 1613 + . alignment_id 0 ; Query GL50803_13963-t26_1-p1 ; Align 64372 1 1137 utg18_pilon exonerate:protein2genome:local gene 65574 67064 1437 + . gene_id 0 ; sequence GL50803_13964-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 65574 66521 . + . utg18_pilon exonerate:protein2genome:local exon 65574 66521 . + . insertions 0 ; deletions 4 utg18_pilon exonerate:protein2genome:local splice5 66522 66523 . + . intron_id 1 ; splice_site "GA" utg18_pilon exonerate:protein2genome:local intron 66522 66560 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 66559 66560 . + . intron_id 0 ; splice_site "AA" utg18_pilon exonerate:protein2genome:local cds 66561 67064 . + . utg18_pilon exonerate:protein2genome:local exon 66561 67064 . + . insertions 9 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 65574 67064 1437 + . alignment_id 0 ; Query GL50803_13964-t26_1-p1 ; Align 65574 1 858 ; Align 66432 291 90 ; Align 66561 321 354 ; Align 66924 439 141 utg731_pilon exonerate:protein2genome:local gene 1389630 1392959 5181 + . gene_id 0 ; sequence GL50803_13981-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1389630 1392959 . + . utg731_pilon exonerate:protein2genome:local exon 1389630 1392959 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1389630 1392959 5181 + . alignment_id 0 ; Query GL50803_13981-t26_1-p1 ; Align 1389630 1 1077 ; Align 1390710 360 2250 utg731_pilon exonerate:protein2genome:local gene 1393035 1394690 2341 + . gene_id 0 ; sequence GL50803_13982-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1393035 1394690 . + . utg731_pilon exonerate:protein2genome:local exon 1393035 1394690 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1393035 1394690 2341 + . alignment_id 0 ; Query GL50803_13982-t26_1-p1 ; Align 1393035 1 1656 utg11_pilon exonerate:protein2genome:local gene 1231366 1234395 4272 - . gene_id 0 ; sequence GL50803_13988-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1231366 1234395 . - . utg11_pilon exonerate:protein2genome:local exon 1231366 1234395 . - . insertions 6 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1231366 1234395 4272 - . alignment_id 0 ; Query GL50803_13988-t26_1-p1 ; Align 1234396 1 1641 ; Align 1232752 548 171 ; Align 1232578 605 1128 ; Align 1231450 983 84 utg308_pilon exonerate:protein2genome:local gene 651940 652161 229 - . gene_id 0 ; sequence GL50803_13993-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 651940 652161 . - . utg308_pilon exonerate:protein2genome:local exon 651940 652161 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 651940 652161 229 - . alignment_id 0 ; Query GL50803_13993-t26_1-p1 ; Align 652162 1 222 utg47_pilon exonerate:protein2genome:local gene 361150 363067 2278 + . gene_id 0 ; sequence GL50803_13995-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 361150 363067 . + . utg47_pilon exonerate:protein2genome:local exon 361150 363067 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 361150 363067 2278 + . alignment_id 0 ; Query GL50803_13995-t26_1-p1 ; Align 361150 1 777 ; Align 361927 261 657 ; Align 362585 480 483 utg47_pilon exonerate:protein2genome:local gene 356449 357357 1313 - . gene_id 0 ; sequence GL50803_13996-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 356449 357357 . - . utg47_pilon exonerate:protein2genome:local exon 356449 357357 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 356449 357357 1313 - . alignment_id 0 ; Query GL50803_13996-t26_1-p1 ; Align 357358 1 909 utg47_pilon exonerate:protein2genome:local gene 353355 355439 3435 + . gene_id 0 ; sequence GL50803_13998-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 353355 355439 . + . utg47_pilon exonerate:protein2genome:local exon 353355 355439 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 353355 355439 3435 + . alignment_id 0 ; Query GL50803_13998-t26_1-p1 ; Align 353355 1 2085 utg47_pilon exonerate:protein2genome:local gene 351204 353177 2245 - . gene_id 0 ; sequence GL50803_13999-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 351959 353177 . - . utg47_pilon exonerate:protein2genome:local exon 351959 353177 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 351957 351958 . - . intron_id 1 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local intron 351923 351958 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 351923 351924 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 351204 351922 . - . utg47_pilon exonerate:protein2genome:local exon 351204 351922 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 351204 353177 2245 - . alignment_id 0 ; Query GL50803_13999-t26_1-p1 ; Align 353178 1 1005 ; Align 352173 337 213 ; Align 351921 409 717 utg64_pilon exonerate:protein2genome:local gene 534988 535623 680 - . gene_id 0 ; sequence GL50803_14002-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 534988 535623 . - . utg64_pilon exonerate:protein2genome:local exon 534988 535623 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 534988 535623 680 - . alignment_id 0 ; Query GL50803_14002-t26_1-p1 ; Align 535624 1 471 ; Align 535153 159 165 utg64_pilon exonerate:protein2genome:local gene 536943 539214 3019 - . gene_id 0 ; sequence GL50803_14003-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 536943 539214 . - . utg64_pilon exonerate:protein2genome:local exon 536943 539214 . - . insertions 0 ; deletions 1 ; frameshifts 4 utg64_pilon exonerate:protein2genome:local similarity 536943 539214 3019 - . alignment_id 0 ; Query GL50803_14003-t26_1-p1 ; Align 539215 5 18 ; Align 539193 11 1536 ; Align 537657 524 714 utg64_pilon exonerate:protein2genome:local gene 540549 542189 2567 - . gene_id 0 ; sequence GL50803_14004-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 540549 542189 . - . utg64_pilon exonerate:protein2genome:local exon 540549 542189 . - . insertions 6 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 540549 542189 2567 - . alignment_id 0 ; Query GL50803_14004-t26_1-p1 ; Align 542190 1 1191 ; Align 540993 398 444 utg64_pilon exonerate:protein2genome:local gene 988074 989813 2015 + . gene_id 0 ; sequence GL50803_14014-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 988074 989813 . + . utg64_pilon exonerate:protein2genome:local exon 988074 989813 . + . insertions 0 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 988074 989813 2015 + . alignment_id 0 ; Query GL50803_14014-t26_1-p1 ; Align 988074 1 1584 ; Align 989658 530 30 ; Align 989688 543 126 utg64_pilon exonerate:protein2genome:local gene 989731 990315 669 + . gene_id 0 ; sequence GL50803_14015-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 989731 990315 . + . utg64_pilon exonerate:protein2genome:local exon 989731 990315 . + . insertions 9 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 989731 990315 669 + . alignment_id 0 ; Query GL50803_14015-t26_1-p1 ; Align 989731 1 198 ; Align 989932 67 189 ; Align 990127 130 189 utg308_pilon exonerate:protein2genome:local gene 626193 671311 3422 - . gene_id 0 ; sequence GL50803_14017-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 671272 671311 . - . utg308_pilon exonerate:protein2genome:local exon 671272 671311 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 671270 671271 . - . intron_id 1 ; splice_site "AT" utg308_pilon exonerate:protein2genome:local intron 628605 671271 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 628605 628606 . - . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 626193 628604 . - . utg308_pilon exonerate:protein2genome:local exon 626193 628604 . - . insertions 3 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 626193 671311 3422 - . alignment_id 0 ; Query GL50803_14017-t26_1-p1 ; Align 671312 24 39 ; Align 628603 38 372 ; Align 628228 162 573 ; Align 627654 353 1461 utg308_pilon exonerate:protein2genome:local gene 623797 626121 2517 - . gene_id 0 ; sequence GL50803_14018-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 623797 626121 . - . utg308_pilon exonerate:protein2genome:local exon 623797 626121 . - . insertions 0 ; deletions 5 utg308_pilon exonerate:protein2genome:local similarity 623797 626121 2517 - . alignment_id 0 ; Query GL50803_14018-t26_1-p1 ; Align 626122 1 1347 ; Align 624775 454 81 ; Align 624694 482 897 utg308_pilon exonerate:protein2genome:local gene 622790 623689 1503 - . gene_id 0 ; sequence GL50803_14019-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 622790 623689 . - . utg308_pilon exonerate:protein2genome:local exon 622790 623689 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 622790 623689 1503 - . alignment_id 0 ; Query GL50803_14019-t26_1-p1 ; Align 623690 1 900 utg731_pilon exonerate:protein2genome:local gene 663049 664736 1800 - . gene_id 0 ; sequence GL50803_14027-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 663049 664736 . - . utg731_pilon exonerate:protein2genome:local exon 663049 664736 . - . insertions 3 ; deletions 2 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 663049 664736 1800 - . alignment_id 0 ; Query GL50803_14027-t26_1-p1 ; Align 664737 1 84 ; Align 664650 29 810 ; Align 663838 300 288 ; Align 663550 397 501 utg731_pilon exonerate:protein2genome:local gene 941249 941971 1025 + . gene_id 0 ; sequence GL50803_14030-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 941249 941971 . + . utg731_pilon exonerate:protein2genome:local exon 941249 941971 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 941249 941971 1025 + . alignment_id 0 ; Query GL50803_14030-t26_1-p1 ; Align 941249 1 723 utg731_pilon exonerate:protein2genome:local gene 1079006 1079695 917 - . gene_id 0 ; sequence GL50803_14038-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1079006 1079695 . - . utg731_pilon exonerate:protein2genome:local exon 1079006 1079695 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1079006 1079695 917 - . alignment_id 0 ; Query GL50803_14038-t26_1-p1 ; Align 1079696 1 690 utg731_pilon exonerate:protein2genome:local gene 1427726 1481970 743 + . gene_id 0 ; sequence GL50803_14043-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1427726 1428268 . + . utg731_pilon exonerate:protein2genome:local exon 1427726 1428268 . + . insertions 12 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local splice5 1428269 1428270 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1428269 1481783 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1481782 1481783 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1481784 1481970 . + . utg731_pilon exonerate:protein2genome:local exon 1481784 1481970 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1427726 1481970 743 + . alignment_id 0 ; Query GL50803_14043-t26_1-p1 ; Align 1427726 1 132 ; Align 1427870 45 18 ; Align 1427889 51 378 ; Align 1481785 178 186 utg11_pilon exonerate:protein2genome:local gene 1155620 1157401 2661 - . gene_id 0 ; sequence GL50803_14044-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1155620 1157401 . - . utg11_pilon exonerate:protein2genome:local exon 1155620 1157401 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1155620 1157401 2661 - . alignment_id 0 ; Query GL50803_14044-t26_1-p1 ; Align 1157402 1 969 ; Align 1156430 324 810 utg11_pilon exonerate:protein2genome:local gene 376879 377841 1072 + . gene_id 0 ; sequence GL50803_14045-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 376879 377841 . + . utg11_pilon exonerate:protein2genome:local exon 376879 377841 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 376879 377841 1072 + . alignment_id 0 ; Query GL50803_14045-t26_1-p1 ; Align 376879 1 963 utg11_pilon exonerate:protein2genome:local gene 373467 373889 634 - . gene_id 0 ; sequence GL50803_14046-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 373467 373889 . - . utg11_pilon exonerate:protein2genome:local exon 373467 373889 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 373467 373889 634 - . alignment_id 0 ; Query GL50803_14046-t26_1-p1 ; Align 373890 1 423 utg11_pilon exonerate:protein2genome:local gene 372118 373320 1692 - . gene_id 0 ; sequence GL50803_14047-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 372118 373320 . - . utg11_pilon exonerate:protein2genome:local exon 372118 373320 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 372118 373320 1692 - . alignment_id 0 ; Query GL50803_14047-t26_1-p1 ; Align 373321 1 1203 utg11_pilon exonerate:protein2genome:local gene 370127 370825 1075 + . gene_id 0 ; sequence GL50803_14048-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 370127 370825 . + . utg11_pilon exonerate:protein2genome:local exon 370127 370825 . + . insertions 0 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 370127 370825 1075 + . alignment_id 0 ; Query GL50803_14048-t26_1-p1 ; Align 370127 1 396 ; Align 370523 138 303 utg11_pilon exonerate:protein2genome:local gene 365485 365892 699 - . gene_id 0 ; sequence GL50803_14049-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 365485 365892 . - . utg11_pilon exonerate:protein2genome:local exon 365485 365892 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 365485 365892 699 - . alignment_id 0 ; Query GL50803_14049-t26_1-p1 ; Align 365893 1 408 utg64_pilon exonerate:protein2genome:local gene 675037 677595 3391 + . gene_id 0 ; sequence GL50803_14054-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 675037 677595 . + . utg64_pilon exonerate:protein2genome:local exon 675037 677595 . + . insertions 9 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 675037 677595 3391 + . alignment_id 0 ; Query GL50803_14054-t26_1-p1 ; Align 675037 1 597 ; Align 675643 200 162 ; Align 675805 255 1791 utg64_pilon exonerate:protein2genome:local gene 673950 675029 1432 - . gene_id 0 ; sequence GL50803_14055-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 673950 675029 . - . utg64_pilon exonerate:protein2genome:local exon 673950 675029 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 673950 675029 1432 - . alignment_id 0 ; Query GL50803_14055-t26_1-p1 ; Align 675030 1 1080 utg64_pilon exonerate:protein2genome:local gene 666369 670469 5445 - . gene_id 0 ; sequence GL50803_14058-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 666369 670469 . - . utg64_pilon exonerate:protein2genome:local exon 666369 670469 . - . insertions 0 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 666369 670469 5445 - . alignment_id 0 ; Query GL50803_14058-t26_1-p1 ; Align 670470 1 582 ; Align 669888 199 3519 utg64_pilon exonerate:protein2genome:local gene 260299 260889 947 - . gene_id 0 ; sequence GL50803_14064-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 260299 260889 . - . utg64_pilon exonerate:protein2genome:local exon 260299 260889 . - . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 260299 260889 947 - . alignment_id 0 ; Query GL50803_14064-t26_1-p1 ; Align 260890 1 285 ; Align 260605 98 306 utg64_pilon exonerate:protein2genome:local gene 1000685 1001095 630 + . gene_id 0 ; sequence GL50803_14068-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1000685 1001095 . + . utg64_pilon exonerate:protein2genome:local exon 1000685 1001095 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1000685 1001095 630 + . alignment_id 0 ; Query GL50803_14068-t26_1-p1 ; Align 1000685 41 411 utg64_pilon exonerate:protein2genome:local gene 1002807 1003988 1731 - . gene_id 0 ; sequence GL50803_14069-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1002807 1003988 . - . utg64_pilon exonerate:protein2genome:local exon 1002807 1003988 . - . insertions 0 ; deletions 5 utg64_pilon exonerate:protein2genome:local similarity 1002807 1003988 1731 - . alignment_id 0 ; Query GL50803_14069-t26_1-p1 ; Align 1003989 1 621 ; Align 1003368 209 39 ; Align 1003329 226 522 utg64_pilon exonerate:protein2genome:local gene 1005541 1007913 2897 + . gene_id 0 ; sequence GL50803_14070-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1005541 1007913 . + . utg64_pilon exonerate:protein2genome:local exon 1005541 1007913 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1005541 1007913 2897 + . alignment_id 0 ; Query GL50803_14070-t26_1-p1 ; Align 1005541 1 2373 utg64_pilon exonerate:protein2genome:local gene 1007938 1010700 3205 - . gene_id 0 ; sequence GL50803_14071-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1007938 1010700 . - . utg64_pilon exonerate:protein2genome:local exon 1007938 1010700 . - . insertions 3 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 1007938 1010700 3205 - . alignment_id 0 ; Query GL50803_14071-t26_1-p1 ; Align 1010701 1 1125 ; Align 1009576 379 876 ; Align 1008697 671 759 utg64_pilon exonerate:protein2genome:local gene 509371 510906 2212 - . gene_id 0 ; sequence GL50803_14083-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 509371 510906 . - . utg64_pilon exonerate:protein2genome:local exon 509371 510906 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 509371 510906 2212 - . alignment_id 0 ; Query GL50803_14083-t26_1-p1 ; Align 510907 1 1536 utg349_pilon exonerate:protein2genome:local gene 1554425 1565370 708 + . gene_id 0 ; sequence GL50803_14085-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1554425 1555064 . + . utg349_pilon exonerate:protein2genome:local exon 1554425 1555064 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1555065 1555066 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1555065 1565164 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1565163 1565164 . + . intron_id 0 ; splice_site "TG" utg349_pilon exonerate:protein2genome:local cds 1565165 1565370 . + . utg349_pilon exonerate:protein2genome:local exon 1565165 1565370 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1554425 1565370 708 + . alignment_id 0 ; Query GL50803_14085-t26_1-p1 ; Align 1554425 1 639 ; Align 1565167 215 204 utg349_pilon exonerate:protein2genome:local gene 1549637 1550413 1234 + . gene_id 0 ; sequence GL50803_14086-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1549637 1550413 . + . utg349_pilon exonerate:protein2genome:local exon 1549637 1550413 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1549637 1550413 1234 + . alignment_id 0 ; Query GL50803_14086-t26_1-p1 ; Align 1549637 1 24 ; Align 1549661 10 753 utg11_pilon exonerate:protein2genome:local gene 1114427 1115926 1989 - . gene_id 0 ; sequence GL50803_14089-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1114427 1115926 . - . utg11_pilon exonerate:protein2genome:local exon 1114427 1115926 . - . insertions 0 ; deletions 6 utg11_pilon exonerate:protein2genome:local similarity 1114427 1115926 1989 - . alignment_id 0 ; Query GL50803_14089-t26_1-p1 ; Align 1115927 1 687 ; Align 1115240 232 297 ; Align 1114943 335 516 utg11_pilon exonerate:protein2genome:local gene 1120792 1121184 641 + . gene_id 0 ; sequence GL50803_14091-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1120792 1121184 . + . utg11_pilon exonerate:protein2genome:local exon 1120792 1121184 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1120792 1121184 641 + . alignment_id 0 ; Query GL50803_14091-t26_1-p1 ; Align 1120792 1 393 utg308_pilon exonerate:protein2genome:local gene 541345 542338 1483 + . gene_id 0 ; sequence GL50803_14093-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 541345 542338 . + . utg308_pilon exonerate:protein2genome:local exon 541345 542338 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 541345 542338 1483 + . alignment_id 0 ; Query GL50803_14093-t26_1-p1 ; Align 541345 1 444 ; Align 541790 149 549 utg308_pilon exonerate:protein2genome:local gene 542396 544927 2552 + . gene_id 0 ; sequence GL50803_14094-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 542396 544927 . + . utg308_pilon exonerate:protein2genome:local exon 542396 544927 . + . insertions 6 ; deletions 6 utg308_pilon exonerate:protein2genome:local similarity 542396 544927 2552 + . alignment_id 0 ; Query GL50803_14094-t26_1-p1 ; Align 542396 1 1122 ; Align 543518 377 330 ; Align 543851 487 153 ; Align 544004 539 27 ; Align 544031 550 186 ; Align 544217 613 81 ; Align 544301 640 627 utg308_pilon exonerate:protein2genome:local gene 545575 546540 1552 - . gene_id 0 ; sequence GL50803_14095-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 545575 546540 . - . utg308_pilon exonerate:protein2genome:local exon 545575 546540 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 545575 546540 1552 - . alignment_id 0 ; Query GL50803_14095-t26_1-p1 ; Align 546541 1 966 utg265_pilon exonerate:protein2genome:local gene 36622 38898 3284 + . gene_id 0 ; sequence GL50803_14098-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 36622 38898 . + . utg265_pilon exonerate:protein2genome:local exon 36622 38898 . + . insertions 3 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 36622 38898 3284 + . alignment_id 0 ; Query GL50803_14098-t26_1-p1 ; Align 36622 9 1734 ; Align 38356 588 294 ; Align 38653 686 246 utg265_pilon exonerate:protein2genome:local gene 41877 42683 1069 - . gene_id 0 ; sequence GL50803_14100-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 41877 42683 . - . utg265_pilon exonerate:protein2genome:local exon 41877 42683 . - . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 41877 42683 1069 - . alignment_id 0 ; Query GL50803_14100-t26_1-p1 ; Align 42684 1 588 ; Align 42096 200 219 utg265_pilon exonerate:protein2genome:local gene 44078 45565 1865 - . gene_id 0 ; sequence GL50803_14101-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 44078 45565 . - . utg265_pilon exonerate:protein2genome:local exon 44078 45565 . - . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 44078 45565 1865 - . alignment_id 0 ; Query GL50803_14101-t26_1-p1 ; Align 45566 10 213 ; Align 45353 83 1275 utg731_pilon exonerate:protein2genome:local gene 625672 627975 3596 + . gene_id 0 ; sequence GL50803_14104-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 625672 627975 . + . utg731_pilon exonerate:protein2genome:local exon 625672 627975 . + . insertions 6 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 625672 627975 3596 + . alignment_id 0 ; Query GL50803_14104-t26_1-p1 ; Align 625672 1 741 ; Align 626413 249 501 ; Align 626920 416 1056 utg349_pilon exonerate:protein2genome:local gene 790648 793941 3787 + . gene_id 0 ; sequence GL50803_14107-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 790648 793941 . + . utg349_pilon exonerate:protein2genome:local exon 790648 793941 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 790648 793941 3787 + . alignment_id 0 ; Query GL50803_14107-t26_1-p1 ; Align 790648 1 3294 utg308_pilon exonerate:protein2genome:local gene 331877 332626 1004 - . gene_id 0 ; sequence GL50803_14109-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 331877 332626 . - . utg308_pilon exonerate:protein2genome:local exon 331877 332626 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 331877 332626 1004 - . alignment_id 0 ; Query GL50803_14109-t26_1-p1 ; Align 332627 1 750 utg731_pilon exonerate:protein2genome:local gene 1527271 1529427 3171 + . gene_id 0 ; sequence GL50803_14117-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1527271 1529427 . + . utg731_pilon exonerate:protein2genome:local exon 1527271 1529427 . + . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1527271 1529427 3171 + . alignment_id 0 ; Query GL50803_14117-t26_1-p1 ; Align 1527271 1 1212 ; Align 1528483 408 945 utg212_pilon exonerate:protein2genome:local gene 28605 29396 1025 + . gene_id 0 ; sequence GL50803_14119-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 28605 29396 . + . utg212_pilon exonerate:protein2genome:local exon 28605 29396 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 28605 29396 1025 + . alignment_id 0 ; Query GL50803_14119-t26_1-p1 ; Align 28605 4 792 utg11_pilon exonerate:protein2genome:local gene 1533330 1535228 2176 + . gene_id 0 ; sequence GL50803_14126-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1533330 1535228 . + . utg11_pilon exonerate:protein2genome:local exon 1533330 1535228 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1533330 1535228 2176 + . alignment_id 0 ; Query GL50803_14126-t26_1-p1 ; Align 1533330 1 1641 ; Align 1534971 549 258 utg11_pilon exonerate:protein2genome:local gene 1535255 1537339 2167 - . gene_id 0 ; sequence GL50803_14127-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1535255 1537339 . - . utg11_pilon exonerate:protein2genome:local exon 1535255 1537339 . - . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1535255 1537339 2167 - . alignment_id 0 ; Query GL50803_14127-t26_1-p1 ; Align 1537340 22 924 ; Align 1536413 330 474 ; Align 1535939 489 684 utg212_pilon exonerate:protein2genome:local gene 80129 80569 577 - . gene_id 0 ; sequence GL50803_14131-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 80129 80569 . - . utg212_pilon exonerate:protein2genome:local exon 80129 80569 . - . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 80129 80569 577 - . alignment_id 0 ; Query GL50803_14131-t26_1-p1 ; Align 80570 1 300 ; Align 80267 101 138 utg731_pilon exonerate:protein2genome:local gene 1502492 1503277 1200 + . gene_id 0 ; sequence GL50803_14133-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1502492 1503277 . + . utg731_pilon exonerate:protein2genome:local exon 1502492 1503277 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1502492 1503277 1200 + . alignment_id 0 ; Query GL50803_14133-t26_1-p1 ; Align 1502492 1 786 utg731_pilon exonerate:protein2genome:local gene 1594952 1596112 1961 + . gene_id 0 ; sequence GL50803_14135-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1594952 1596112 . + . utg731_pilon exonerate:protein2genome:local exon 1594952 1596112 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1594952 1596112 1961 + . alignment_id 0 ; Query GL50803_14135-t26_1-p1 ; Align 1594952 1 1161 utg47_pilon exonerate:protein2genome:local gene 985862 988654 3607 + . gene_id 0 ; sequence GL50803_14158-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 985862 988654 . + . utg47_pilon exonerate:protein2genome:local exon 985862 988654 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 985862 988654 3607 + . alignment_id 0 ; Query GL50803_14158-t26_1-p1 ; Align 985862 1 2793 utg212_pilon exonerate:protein2genome:local gene 298840 299595 983 + . gene_id 0 ; sequence GL50803_14161-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 298840 299595 . + . utg212_pilon exonerate:protein2genome:local exon 298840 299595 . + . insertions 0 ; deletions 3 utg212_pilon exonerate:protein2genome:local similarity 298840 299595 983 + . alignment_id 0 ; Query GL50803_14161-t26_1-p1 ; Align 298840 1 447 ; Align 299287 153 309 utg731_pilon exonerate:protein2genome:local gene 1054886 1057330 2103 + . gene_id 0 ; sequence GL50803_14164-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1054886 1057330 . + . utg731_pilon exonerate:protein2genome:local exon 1054886 1057330 . + . insertions 12 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1054886 1057330 2103 + . alignment_id 0 ; Query GL50803_14164-t26_1-p1 ; Align 1054886 1 1197 ; Align 1056089 400 6 ; Align 1056101 402 1230 utg64_pilon exonerate:protein2genome:local gene 975017 977479 2913 - . gene_id 0 ; sequence GL50803_14167-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 975017 977479 . - . utg64_pilon exonerate:protein2genome:local exon 975017 977479 . - . insertions 0 ; deletions 5 utg64_pilon exonerate:protein2genome:local similarity 975017 977479 2913 - . alignment_id 0 ; Query GL50803_14167-t26_1-p1 ; Align 977480 1 1485 ; Align 975995 499 699 ; Align 975296 734 279 utg64_pilon exonerate:protein2genome:local gene 973590 974965 1977 + . gene_id 0 ; sequence GL50803_14168-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 973590 974965 . + . utg64_pilon exonerate:protein2genome:local exon 973590 974965 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 973590 974965 1977 + . alignment_id 0 ; Query GL50803_14168-t26_1-p1 ; Align 973590 1 60 ; Align 973652 22 1314 utg349_pilon exonerate:protein2genome:local gene 1001990 1002256 458 - . gene_id 0 ; sequence GL50803_14171-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1001990 1002256 . - . utg349_pilon exonerate:protein2genome:local exon 1001990 1002256 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1001990 1002256 458 - . alignment_id 0 ; Query GL50803_14171-t26_1-p1 ; Align 1002257 1 267 utg349_pilon exonerate:protein2genome:local gene 1001059 1001964 1456 - . gene_id 0 ; sequence GL50803_14172-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1001059 1001964 . - . utg349_pilon exonerate:protein2genome:local exon 1001059 1001964 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1001059 1001964 1456 - . alignment_id 0 ; Query GL50803_14172-t26_1-p1 ; Align 1001965 1 906 utg349_pilon exonerate:protein2genome:local gene 998205 999797 2600 - . gene_id 0 ; sequence GL50803_14174-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 998205 999797 . - . utg349_pilon exonerate:protein2genome:local exon 998205 999797 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 998205 999797 2600 - . alignment_id 0 ; Query GL50803_14174-t26_1-p1 ; Align 999798 1 1593 utg731_pilon exonerate:protein2genome:local gene 1272267 1272683 635 + . gene_id 0 ; sequence GL50803_14180-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1272267 1272683 . + . utg731_pilon exonerate:protein2genome:local exon 1272267 1272683 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1272267 1272683 635 + . alignment_id 0 ; Query GL50803_14180-t26_1-p1 ; Align 1272267 1 417 utg731_pilon exonerate:protein2genome:local gene 1274736 1276808 2621 + . gene_id 0 ; sequence GL50803_14181-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1274736 1276808 . + . utg731_pilon exonerate:protein2genome:local exon 1274736 1276808 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1274736 1276808 2621 + . alignment_id 0 ; Query GL50803_14181-t26_1-p1 ; Align 1274736 1 2073 utg731_pilon exonerate:protein2genome:local gene 1277901 1278500 475 + . gene_id 0 ; sequence GL50803_14182-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1277901 1278500 . + . utg731_pilon exonerate:protein2genome:local exon 1277901 1278500 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1277901 1278500 475 + . alignment_id 0 ; Query GL50803_14182-t26_1-p1 ; Align 1277901 1 600 utg11_pilon exonerate:protein2genome:local gene 71731 72436 836 + . gene_id 0 ; sequence GL50803_14192-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 71731 72436 . + . utg11_pilon exonerate:protein2genome:local exon 71731 72436 . + . insertions 0 ; deletions 2 ; frameshifts 4 utg11_pilon exonerate:protein2genome:local similarity 71731 72436 836 + . alignment_id 0 ; Query GL50803_14192-t26_1-p1 ; Align 71731 1 90 ; Align 71825 31 15 ; Align 71840 38 597 utg11_pilon exonerate:protein2genome:local gene 1083543 1085735 2488 - . gene_id 0 ; sequence GL50803_14195-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1083543 1085735 . - . utg11_pilon exonerate:protein2genome:local exon 1083543 1085735 . - . insertions 12 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1083543 1085735 2488 - . alignment_id 0 ; Query GL50803_14195-t26_1-p1 ; Align 1085736 1 1383 ; Align 1084344 462 750 ; Align 1083591 712 48 utg47_pilon exonerate:protein2genome:local gene 677723 678844 1765 + . gene_id 0 ; sequence GL50803_14198-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 677723 678844 . + . utg47_pilon exonerate:protein2genome:local exon 677723 678844 . + . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 677723 678844 1765 + . alignment_id 0 ; Query GL50803_14198-t26_1-p1 ; Align 677723 1 573 ; Align 678296 196 549 utg47_pilon exonerate:protein2genome:local gene 681987 683843 2917 - . gene_id 0 ; sequence GL50803_14200-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 681987 683843 . - . utg47_pilon exonerate:protein2genome:local exon 681987 683843 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 681987 683843 2917 - . alignment_id 0 ; Query GL50803_14200-t26_1-p1 ; Align 683844 1 1857 utg731_pilon exonerate:protein2genome:local gene 604012 605643 1994 - . gene_id 0 ; sequence GL50803_14203-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 604012 605643 . - . utg731_pilon exonerate:protein2genome:local exon 604012 605643 . - . insertions 3 ; deletions 1 ; frameshifts 3 utg731_pilon exonerate:protein2genome:local similarity 604012 605643 1994 - . alignment_id 0 ; Query GL50803_14203-t26_1-p1 ; Align 605644 1 321 ; Align 605322 108 777 ; Align 604542 367 243 ; Align 604297 449 285 utg731_pilon exonerate:protein2genome:local gene 592666 596657 5157 - . gene_id 0 ; sequence GL50803_14206-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 592666 596657 . - . utg731_pilon exonerate:protein2genome:local exon 592666 596657 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 592666 596657 5157 - . alignment_id 0 ; Query GL50803_14206-t26_1-p1 ; Align 596658 1 762 ; Align 595895 255 582 ; Align 595312 449 2382 ; Align 592930 1244 264 utg11_pilon exonerate:protein2genome:local gene 1286707 1289208 2658 + . gene_id 0 ; sequence GL50803_14208-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1286707 1287163 . + . utg11_pilon exonerate:protein2genome:local exon 1286707 1287163 . + . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local splice5 1287164 1287165 . + . intron_id 1 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local intron 1287164 1287193 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1287192 1287193 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1287194 1289208 . + . utg11_pilon exonerate:protein2genome:local exon 1287194 1289208 . + . insertions 3 ; deletions 6 utg11_pilon exonerate:protein2genome:local similarity 1286707 1289208 2658 + . alignment_id 0 ; Query GL50803_14208-t26_1-p1 ; Align 1286707 1 312 ; Align 1287019 108 144 ; Align 1287196 157 6 ; Align 1287202 161 390 ; Align 1287592 292 27 ; Align 1287619 302 60 ; Align 1287682 322 312 ; Align 1287994 427 771 ; Align 1288765 685 444 utg11_pilon exonerate:protein2genome:local gene 1272509 1273031 808 + . gene_id 0 ; sequence GL50803_14212-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1272509 1273031 . + . utg11_pilon exonerate:protein2genome:local exon 1272509 1273031 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 1272509 1273031 808 + . alignment_id 0 ; Query GL50803_14212-t26_1-p1 ; Align 1272509 16 63 ; Align 1272573 37 459 utg11_pilon exonerate:protein2genome:local gene 1273105 1273998 1112 + . gene_id 0 ; sequence GL50803_14213-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1273105 1273998 . + . utg11_pilon exonerate:protein2genome:local exon 1273105 1273998 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1273105 1273998 1112 + . alignment_id 0 ; Query GL50803_14213-t26_1-p1 ; Align 1273105 1 141 ; Align 1273246 50 753 utg731_pilon exonerate:protein2genome:local gene 375771 378086 3088 + . gene_id 0 ; sequence GL50803_14216-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 375771 378086 . + . utg731_pilon exonerate:protein2genome:local exon 375771 378086 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 375771 378086 3088 + . alignment_id 0 ; Query GL50803_14216-t26_1-p1 ; Align 375771 1 990 ; Align 376761 333 1326 utg47_pilon exonerate:protein2genome:local gene 1481694 1482596 1375 + . gene_id 0 ; sequence GL50803_14223-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1481694 1482596 . + . utg47_pilon exonerate:protein2genome:local exon 1481694 1482596 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1481694 1482596 1375 + . alignment_id 0 ; Query GL50803_14223-t26_1-p1 ; Align 1481694 1 903 utg11_pilon exonerate:protein2genome:local gene 1217781 1223199 7432 - . gene_id 0 ; sequence GL50803_14225-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1217781 1223199 . - . utg11_pilon exonerate:protein2genome:local exon 1217781 1223199 . - . insertions 9 ; deletions 2 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 1217781 1223199 7432 - . alignment_id 0 ; Query GL50803_14225-t26_1-p1 ; Align 1223200 1 1680 ; Align 1221520 562 1113 ; Align 1220407 934 162 ; Align 1220242 988 78 ; Align 1220161 1014 387 ; Align 1219773 1143 384 ; Align 1219386 1271 1605 utg349_pilon exonerate:protein2genome:local gene 1064310 1068668 5273 - . gene_id 0 ; sequence GL50803_14230-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1064656 1068668 . - . utg349_pilon exonerate:protein2genome:local exon 1064656 1068668 . - . insertions 0 ; deletions 7 utg349_pilon exonerate:protein2genome:local splice5 1064654 1064655 . - . intron_id 1 ; splice_site "CA" utg349_pilon exonerate:protein2genome:local intron 1064626 1064655 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1064626 1064627 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1064310 1064625 . - . utg349_pilon exonerate:protein2genome:local exon 1064310 1064625 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1064310 1068668 5273 - . alignment_id 0 ; Query GL50803_14230-t26_1-p1 ; Align 1068669 1 366 ; Align 1068303 124 1386 ; Align 1066917 588 60 ; Align 1066857 612 2199 ; Align 1064625 1346 315 utg349_pilon exonerate:protein2genome:local gene 1073176 1073520 272 + . gene_id 0 ; sequence GL50803_14231-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1073176 1073520 . + . utg349_pilon exonerate:protein2genome:local exon 1073176 1073520 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1073176 1073520 272 + . alignment_id 0 ; Query GL50803_14231-t26_1-p1 ; Align 1073176 1 345 utg212_pilon exonerate:protein2genome:local gene 359134 360141 1425 - . gene_id 0 ; sequence GL50803_14235-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 359134 360141 . - . utg212_pilon exonerate:protein2genome:local exon 359134 360141 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 359134 360141 1425 - . alignment_id 0 ; Query GL50803_14235-t26_1-p1 ; Align 360142 1 1008 utg212_pilon exonerate:protein2genome:local gene 351096 351656 723 + . gene_id 0 ; sequence GL50803_14236-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 351096 351656 . + . utg212_pilon exonerate:protein2genome:local exon 351096 351656 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 351096 351656 723 + . alignment_id 0 ; Query GL50803_14236-t26_1-p1 ; Align 351096 1 561 utg212_pilon exonerate:protein2genome:local gene 348244 350094 2607 - . gene_id 0 ; sequence GL50803_14238-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 348244 350094 . - . utg212_pilon exonerate:protein2genome:local exon 348244 350094 . - . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 348244 350094 2607 - . alignment_id 0 ; Query GL50803_14238-t26_1-p1 ; Align 350095 1 1725 ; Align 348367 576 123 utg47_pilon exonerate:protein2genome:local gene 851578 855655 5038 - . gene_id 0 ; sequence GL50803_14241-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 851578 855655 . - . utg47_pilon exonerate:protein2genome:local exon 851578 855655 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 851578 855655 5038 - . alignment_id 0 ; Query GL50803_14241-t26_1-p1 ; Align 855656 1 522 ; Align 855134 176 3120 ; Align 852013 1216 435 utg47_pilon exonerate:protein2genome:local gene 832981 849690 23919 + . gene_id 0 ; sequence GL50803_14242-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 832981 849690 . + . utg47_pilon exonerate:protein2genome:local exon 832981 849690 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 832981 849690 23919 + . alignment_id 0 ; Query GL50803_14242-t26_1-p1 ; Align 832981 1 3762 ; Align 836743 1256 12075 ; Align 848818 5282 873 utg731_pilon exonerate:protein2genome:local gene 1091312 1093093 2494 - . gene_id 0 ; sequence GL50803_14247-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1091312 1093093 . - . utg731_pilon exonerate:protein2genome:local exon 1091312 1093093 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1091312 1093093 2494 - . alignment_id 0 ; Query GL50803_14247-t26_1-p1 ; Align 1093094 1 1782 utg731_pilon exonerate:protein2genome:local gene 1090066 1090755 859 + . gene_id 0 ; sequence GL50803_14248-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1090066 1090755 . + . utg731_pilon exonerate:protein2genome:local exon 1090066 1090755 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1090066 1090755 859 + . alignment_id 0 ; Query GL50803_14248-t26_1-p1 ; Align 1090066 1 690 utg308_pilon exonerate:protein2genome:local gene 435387 436376 1154 - . gene_id 0 ; sequence GL50803_14250-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 435387 436376 . - . utg308_pilon exonerate:protein2genome:local exon 435387 436376 . - . insertions 0 ; deletions 8 utg308_pilon exonerate:protein2genome:local similarity 435387 436376 1154 - . alignment_id 0 ; Query GL50803_14250-t26_1-p1 ; Align 436377 55 372 ; Align 436005 184 150 ; Align 435855 235 297 ; Align 435558 336 171 utg308_pilon exonerate:protein2genome:local gene 436658 437830 1255 - . gene_id 0 ; sequence GL50803_14252-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 436658 437830 . - . utg308_pilon exonerate:protein2genome:local exon 436658 437830 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 436658 437830 1255 - . alignment_id 0 ; Query GL50803_14252-t26_1-p1 ; Align 437831 1 468 ; Align 437360 157 702 utg308_pilon exonerate:protein2genome:local gene 445877 448279 3442 + . gene_id 0 ; sequence GL50803_14254-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 445877 448279 . + . utg308_pilon exonerate:protein2genome:local exon 445877 448279 . + . insertions 3 ; deletions 4 utg308_pilon exonerate:protein2genome:local similarity 445877 448279 3442 + . alignment_id 0 ; Query GL50803_14254-t26_1-p1 ; Align 445877 1 678 ; Align 446558 227 222 ; Align 446780 305 1500 utg18_pilon exonerate:protein2genome:local gene 224245 224616 610 + . gene_id 0 ; sequence GL50803_14256-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 224245 224616 . + . utg18_pilon exonerate:protein2genome:local exon 224245 224616 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 224245 224616 610 + . alignment_id 0 ; Query GL50803_14256-t26_1-p1 ; Align 224245 1 372 utg731_pilon exonerate:protein2genome:local gene 107363 107734 610 - . gene_id 0 ; sequence GL50803_14256-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 107363 107734 . - . utg731_pilon exonerate:protein2genome:local exon 107363 107734 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 107363 107734 610 - . alignment_id 0 ; Query GL50803_14256-t26_1-p1 ; Align 107735 1 372 utg47_pilon exonerate:protein2genome:local gene 1791168 1791782 1054 + . gene_id 0 ; sequence GL50803_14259-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1791168 1791782 . + . utg47_pilon exonerate:protein2genome:local exon 1791168 1791782 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1791168 1791782 1054 + . alignment_id 0 ; Query GL50803_14259-t26_1-p1 ; Align 1791168 1 615 utg11_pilon exonerate:protein2genome:local gene 1309887 1310369 478 - . gene_id 0 ; sequence GL50803_14261-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1309887 1310369 . - . utg11_pilon exonerate:protein2genome:local exon 1309887 1310369 . - . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 1309887 1310369 478 - . alignment_id 0 ; Query GL50803_14261-t26_1-p1 ; Align 1310370 1 42 ; Align 1310328 19 441 utg11_pilon exonerate:protein2genome:local gene 1303575 1304549 816 + . gene_id 0 ; sequence GL50803_14262-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1303575 1304549 . + . utg11_pilon exonerate:protein2genome:local exon 1303575 1304549 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1303575 1304549 816 + . alignment_id 0 ; Query GL50803_14262-t26_1-p1 ; Align 1303575 1 975 utg47_pilon exonerate:protein2genome:local gene 1814289 1815182 813 + . gene_id 0 ; sequence GL50803_14269-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1814289 1815182 . + . utg47_pilon exonerate:protein2genome:local exon 1814289 1815182 . + . insertions 0 ; deletions 13 utg47_pilon exonerate:protein2genome:local similarity 1814289 1815182 813 + . alignment_id 0 ; Query GL50803_14269-t26_1-p1 ; Align 1814289 230 81 ; Align 1814370 261 273 ; Align 1814643 353 57 ; Align 1814700 375 18 ; Align 1814718 383 72 ; Align 1814790 410 393 utg47_pilon exonerate:protein2genome:local gene 1810428 1810748 485 - . gene_id 0 ; sequence GL50803_14270-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1810428 1810748 . - . utg47_pilon exonerate:protein2genome:local exon 1810428 1810748 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1810428 1810748 485 - . alignment_id 0 ; Query GL50803_14270-t26_1-p1 ; Align 1810749 38 321 utg265_pilon exonerate:protein2genome:local gene 745678 746568 1110 + . gene_id 0 ; sequence GL50803_14275-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 745678 746568 . + . utg265_pilon exonerate:protein2genome:local exon 745678 746568 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 745678 746568 1110 + . alignment_id 0 ; Query GL50803_14275-t26_1-p1 ; Align 745678 1 891 utg99_pilon exonerate:protein2genome:local gene 73069 76128 4852 - . gene_id 0 ; sequence GL50803_14277-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 73069 76128 . - . utg99_pilon exonerate:protein2genome:local exon 73069 76128 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 73069 76128 4852 - . alignment_id 0 ; Query GL50803_14277-t26_1-p1 ; Align 76129 1 3060 utg99_pilon exonerate:protein2genome:local gene 76198 78189 2743 - . gene_id 0 ; sequence GL50803_14278-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 76198 78189 . - . utg99_pilon exonerate:protein2genome:local exon 76198 78189 . - . insertions 0 ; deletions 2 utg99_pilon exonerate:protein2genome:local similarity 76198 78189 2743 - . alignment_id 0 ; Query GL50803_14278-t26_1-p1 ; Align 78190 1 1167 ; Align 77023 392 825 utg212_pilon exonerate:protein2genome:local gene 377530 379310 2036 + . gene_id 0 ; sequence GL50803_14284-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 377530 379310 . + . utg212_pilon exonerate:protein2genome:local exon 377530 379310 . + . insertions 15 ; deletions 1 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 377530 379310 2036 + . alignment_id 0 ; Query GL50803_14284-t26_1-p1 ; Align 377530 1 111 ; Align 377653 38 507 ; Align 378163 207 255 ; Align 378418 293 123 ; Align 378542 334 156 ; Align 378699 386 612 utg212_pilon exonerate:protein2genome:local gene 375289 376960 2615 + . gene_id 0 ; sequence GL50803_14285-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 375289 376960 . + . utg212_pilon exonerate:protein2genome:local exon 375289 376960 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 375289 376960 2615 + . alignment_id 0 ; Query GL50803_14285-t26_1-p1 ; Align 375289 1 690 ; Align 375980 231 981 utg731_pilon exonerate:protein2genome:local gene 697928 698542 909 - . gene_id 0 ; sequence GL50803_14289-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 697928 698542 . - . utg731_pilon exonerate:protein2genome:local exon 697928 698542 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 697928 698542 909 - . alignment_id 0 ; Query GL50803_14289-t26_1-p1 ; Align 698543 1 615 utg731_pilon exonerate:protein2genome:local gene 696466 697860 1645 + . gene_id 0 ; sequence GL50803_14290-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 696466 697860 . + . utg731_pilon exonerate:protein2genome:local exon 696466 697860 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 696466 697860 1645 + . alignment_id 0 ; Query GL50803_14290-t26_1-p1 ; Align 696466 321 1395 utg308_pilon exonerate:protein2genome:local gene 36740 244113 1651 - . gene_id 0 ; sequence GL50803_14297-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 243597 244113 . - . utg308_pilon exonerate:protein2genome:local exon 243597 244113 . - . insertions 6 ; deletions 2 utg308_pilon exonerate:protein2genome:local splice5 243595 243596 . - . intron_id 1 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 137797 243596 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 137797 137798 . - . intron_id 0 ; splice_site "TG" utg308_pilon exonerate:protein2genome:local cds 136823 137796 . - . utg308_pilon exonerate:protein2genome:local exon 136823 137796 . - . insertions 12 ; deletions 4 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local splice5 136821 136822 . - . intron_id 2 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 83885 136822 . - . intron_id 2 utg308_pilon exonerate:protein2genome:local splice3 83885 83886 . - . intron_id 1 ; splice_site "AA" utg308_pilon exonerate:protein2genome:local cds 83722 83884 . - . utg308_pilon exonerate:protein2genome:local exon 83722 83884 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 83720 83721 . - . intron_id 3 ; splice_site "CT" utg308_pilon exonerate:protein2genome:local intron 36851 83721 . - . intron_id 3 utg308_pilon exonerate:protein2genome:local splice3 36851 36852 . - . intron_id 2 ; splice_site "GG" utg308_pilon exonerate:protein2genome:local cds 36740 36850 . - . utg308_pilon exonerate:protein2genome:local exon 36740 36850 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 36740 244113 1651 - . alignment_id 0 ; Query GL50803_14297-t26_1-p1 ; Align 244114 2 84 ; Align 244030 31 177 ; Align 243847 90 183 ; Align 243664 152 66 ; Align 137795 175 105 ; Align 137687 210 24 ; Align 137660 218 111 ; Align 137549 257 231 ; Align 137318 335 174 ; Align 137141 393 66 ; Align 137074 415 87 ; Align 136984 444 75 ; Align 136909 470 84 ; Align 83884 499 162 ; Align 36851 553 111 utg308_pilon exonerate:protein2genome:local gene 132310 134661 2950 - . gene_id 0 ; sequence GL50803_14298-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 132310 134661 . - . utg308_pilon exonerate:protein2genome:local exon 132310 134661 . - . insertions 6 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 132310 134661 2950 - . alignment_id 0 ; Query GL50803_14298-t26_1-p1 ; Align 134662 1 783 ; Align 133879 265 1245 ; Align 132628 680 318 utg308_pilon exonerate:protein2genome:local gene 131541 131948 631 - . gene_id 0 ; sequence GL50803_14299-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 131541 131948 . - . utg308_pilon exonerate:protein2genome:local exon 131541 131948 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 131541 131948 631 - . alignment_id 0 ; Query GL50803_14299-t26_1-p1 ; Align 131949 6 408 utg47_pilon exonerate:protein2genome:local gene 529430 869279 846 + . gene_id 0 ; sequence GL50803_14307-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 529430 529852 . + . utg47_pilon exonerate:protein2genome:local exon 529430 529852 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 529853 529854 . + . intron_id 1 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 529853 718673 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 718672 718673 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 718674 718766 . + . utg47_pilon exonerate:protein2genome:local exon 718674 718766 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 718767 718768 . + . intron_id 2 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 718767 825417 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 825416 825417 . + . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 825418 825532 . + . utg47_pilon exonerate:protein2genome:local exon 825418 825532 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 825533 825534 . + . intron_id 3 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 825533 869136 . + . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 869135 869136 . + . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 869137 869279 . + . utg47_pilon exonerate:protein2genome:local exon 869137 869279 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 529430 869279 846 + . alignment_id 0 ; Query GL50803_14307-t26_1-p1 ; Align 529430 1 423 ; Align 718674 142 93 ; Align 825418 173 114 ; Align 869139 212 141 utg349_pilon exonerate:protein2genome:local gene 1008024 1008671 843 + . gene_id 0 ; sequence GL50803_14309-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1008024 1008671 . + . utg349_pilon exonerate:protein2genome:local exon 1008024 1008671 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1008024 1008671 843 + . alignment_id 0 ; Query GL50803_14309-t26_1-p1 ; Align 1008024 6 648 utg349_pilon exonerate:protein2genome:local gene 1014298 1014678 631 + . gene_id 0 ; sequence GL50803_14310-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1014298 1014678 . + . utg349_pilon exonerate:protein2genome:local exon 1014298 1014678 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1014298 1014678 631 + . alignment_id 0 ; Query GL50803_14310-t26_1-p1 ; Align 1014298 1 381 utg349_pilon exonerate:protein2genome:local gene 1014862 1015875 1781 - . gene_id 0 ; sequence GL50803_14311-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1014862 1015875 . - . utg349_pilon exonerate:protein2genome:local exon 1014862 1015875 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1014862 1015875 1781 - . alignment_id 0 ; Query GL50803_14311-t26_1-p1 ; Align 1015876 1 1014 utg349_pilon exonerate:protein2genome:local gene 1017806 1018645 876 + . gene_id 0 ; sequence GL50803_14313-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1017806 1018645 . + . utg349_pilon exonerate:protein2genome:local exon 1017806 1018645 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1017806 1018645 876 + . alignment_id 0 ; Query GL50803_14313-t26_1-p1 ; Align 1017806 1 840 utg11_pilon exonerate:protein2genome:local gene 1039224 1039778 905 + . gene_id 0 ; sequence GL50803_14317-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1039224 1039778 . + . utg11_pilon exonerate:protein2genome:local exon 1039224 1039778 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1039224 1039778 905 + . alignment_id 0 ; Query GL50803_14317-t26_1-p1 ; Align 1039224 1 555 utg11_pilon exonerate:protein2genome:local gene 1038422 1039123 951 - . gene_id 0 ; sequence GL50803_14318-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1038422 1039123 . - . utg11_pilon exonerate:protein2genome:local exon 1038422 1039123 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1038422 1039123 951 - . alignment_id 0 ; Query GL50803_14318-t26_1-p1 ; Align 1039124 12 702 utg47_pilon exonerate:protein2genome:local gene 1395050 1395376 533 + . gene_id 0 ; sequence GL50803_14321-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1395050 1395376 . + . utg47_pilon exonerate:protein2genome:local exon 1395050 1395376 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1395050 1395376 533 + . alignment_id 0 ; Query GL50803_14321-t26_1-p1 ; Align 1395050 1 327 utg47_pilon exonerate:protein2genome:local gene 1393211 1394959 2312 - . gene_id 0 ; sequence GL50803_14322-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1393211 1394959 . - . utg47_pilon exonerate:protein2genome:local exon 1393211 1394959 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1393211 1394959 2312 - . alignment_id 0 ; Query GL50803_14322-t26_1-p1 ; Align 1394960 1 1749 utg47_pilon exonerate:protein2genome:local gene 1705018 1706184 766 + . gene_id 0 ; sequence GL50803_14324-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1705018 1705173 . + . utg47_pilon exonerate:protein2genome:local exon 1705018 1705173 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1705174 1705175 . + . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1705174 1705677 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1705676 1705677 . + . intron_id 0 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1705678 1706184 . + . utg47_pilon exonerate:protein2genome:local exon 1705678 1706184 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1705018 1706184 766 + . alignment_id 0 ; Query GL50803_14324-t26_1-p1 ; Align 1705018 6 156 ; Align 1705678 58 507 utg212_pilon exonerate:protein2genome:local gene 193684 194355 1031 - . gene_id 0 ; sequence GL50803_14326-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 193684 194355 . - . utg212_pilon exonerate:protein2genome:local exon 193684 194355 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 193684 194355 1031 - . alignment_id 0 ; Query GL50803_14326-t26_1-p1 ; Align 194356 1 672 utg212_pilon exonerate:protein2genome:local gene 194395 195306 1307 - . gene_id 0 ; sequence GL50803_14327-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 194395 195306 . - . utg212_pilon exonerate:protein2genome:local exon 194395 195306 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 194395 195306 1307 - . alignment_id 0 ; Query GL50803_14327-t26_1-p1 ; Align 195307 1 912 utg212_pilon exonerate:protein2genome:local gene 195520 196027 623 - . gene_id 0 ; sequence GL50803_14328-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 195520 196027 . - . utg212_pilon exonerate:protein2genome:local exon 195520 196027 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 195520 196027 623 - . alignment_id 0 ; Query GL50803_14328-t26_1-p1 ; Align 196028 1 63 ; Align 195964 22 444 utg212_pilon exonerate:protein2genome:local gene 200478 201047 948 + . gene_id 0 ; sequence GL50803_14329-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 200478 201047 . + . utg212_pilon exonerate:protein2genome:local exon 200478 201047 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 200478 201047 948 + . alignment_id 0 ; Query GL50803_14329-t26_1-p1 ; Align 200478 1 570 utg18_pilon exonerate:protein2genome:local gene 37360 569516 945 + . gene_id 0 ; sequence GL50803_14331-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 37360 37698 . + . utg18_pilon exonerate:protein2genome:local exon 37360 37698 . + . insertions 6 ; deletions 1 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local splice5 37699 37700 . + . intron_id 1 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 37699 134127 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 134126 134127 . + . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 134128 134184 . + . utg18_pilon exonerate:protein2genome:local exon 134128 134184 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 134185 134186 . + . intron_id 2 ; splice_site "CG" utg18_pilon exonerate:protein2genome:local intron 134185 183097 . + . intron_id 2 utg18_pilon exonerate:protein2genome:local splice3 183096 183097 . + . intron_id 1 ; splice_site "TG" utg18_pilon exonerate:protein2genome:local cds 183098 183499 . + . utg18_pilon exonerate:protein2genome:local exon 183098 183499 . + . insertions 0 ; deletions 6 utg18_pilon exonerate:protein2genome:local splice5 183500 183501 . + . intron_id 3 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 183500 369534 . + . intron_id 3 utg18_pilon exonerate:protein2genome:local splice3 369533 369534 . + . intron_id 2 ; splice_site "AA" utg18_pilon exonerate:protein2genome:local cds 369535 369576 . + . utg18_pilon exonerate:protein2genome:local exon 369535 369576 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 369577 369578 . + . intron_id 4 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 369577 567374 . + . intron_id 4 utg18_pilon exonerate:protein2genome:local splice3 567373 567374 . + . intron_id 3 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local cds 567375 567654 . + . utg18_pilon exonerate:protein2genome:local exon 567375 567654 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 567655 567656 . + . intron_id 5 ; splice_site "CA" utg18_pilon exonerate:protein2genome:local intron 567655 569398 . + . intron_id 5 utg18_pilon exonerate:protein2genome:local splice3 569397 569398 . + . intron_id 4 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 569399 569516 . + . utg18_pilon exonerate:protein2genome:local exon 569399 569516 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 37360 569516 945 + . alignment_id 0 ; Query GL50803_14331-t26_1-p1 ; Align 37360 3 51 ; Align 37417 20 123 ; Align 37540 62 9 ; Align 37551 65 147 ; Align 134130 115 54 ; Align 183100 134 60 ; Align 183160 155 111 ; Align 183271 196 27 ; Align 183298 206 201 ; Align 369537 274 39 ; Align 567377 288 276 ; Align 569400 381 117 utg47_pilon exonerate:protein2genome:local gene 1315798 1318065 3243 - . gene_id 0 ; sequence GL50803_14333-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1315798 1318065 . - . utg47_pilon exonerate:protein2genome:local exon 1315798 1318065 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1315798 1318065 3243 - . alignment_id 0 ; Query GL50803_14333-t26_1-p1 ; Align 1318066 14 2268 utg47_pilon exonerate:protein2genome:local gene 2007045 2007785 1160 - . gene_id 0 ; sequence GL50803_14341-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2007045 2007785 . - . utg47_pilon exonerate:protein2genome:local exon 2007045 2007785 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2007045 2007785 1160 - . alignment_id 0 ; Query GL50803_14341-t26_1-p1 ; Align 2007786 1 741 utg47_pilon exonerate:protein2genome:local gene 2274078 2278406 5305 - . gene_id 0 ; sequence GL50803_14345-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2274078 2278406 . - . utg47_pilon exonerate:protein2genome:local exon 2274078 2278406 . - . insertions 3 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 2274078 2278406 5305 - . alignment_id 0 ; Query GL50803_14345-t26_1-p1 ; Align 2278407 1 549 ; Align 2277858 185 1158 ; Align 2276700 575 765 ; Align 2275932 830 1854 utg47_pilon exonerate:protein2genome:local gene 2278519 2282088 4286 + . gene_id 0 ; sequence GL50803_14346-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2278519 2282088 . + . utg47_pilon exonerate:protein2genome:local exon 2278519 2282088 . + . insertions 12 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2278519 2282088 4286 + . alignment_id 0 ; Query GL50803_14346-t26_1-p1 ; Align 2278519 1 1362 ; Align 2279884 455 156 ; Align 2280043 507 1485 ; Align 2281534 1002 555 utg47_pilon exonerate:protein2genome:local gene 2282159 2283424 1437 - . gene_id 0 ; sequence GL50803_14347-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2282159 2283424 . - . utg47_pilon exonerate:protein2genome:local exon 2282159 2283424 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2282159 2283424 1437 - . alignment_id 0 ; Query GL50803_14347-t26_1-p1 ; Align 2283425 1 1266 utg47_pilon exonerate:protein2genome:local gene 741710 742910 1470 - . gene_id 0 ; sequence GL50803_14360-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 741710 742910 . - . utg47_pilon exonerate:protein2genome:local exon 741710 742910 . - . insertions 0 ; deletions 2 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 741710 742910 1470 - . alignment_id 0 ; Query GL50803_14360-t26_1-p1 ; Align 742911 1 1119 ; Align 741791 374 3 ; Align 741788 377 78 utg47_pilon exonerate:protein2genome:local gene 744175 745667 1079 - . gene_id 0 ; sequence GL50803_14361-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 744175 745667 . - . utg47_pilon exonerate:protein2genome:local exon 744175 745667 . - . insertions 24 ; deletions 3 ; frameshifts 5 utg47_pilon exonerate:protein2genome:local similarity 744175 745667 1079 - . alignment_id 0 ; Query GL50803_14361-t26_1-p1 ; Align 745668 1 72 ; Align 745591 25 429 ; Align 745156 168 204 ; Align 744952 238 330 ; Align 744616 348 222 ; Align 744382 422 153 ; Align 744229 474 54 utg47_pilon exonerate:protein2genome:local gene 746103 746795 766 - . gene_id 0 ; sequence GL50803_14362-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 746103 746795 . - . utg47_pilon exonerate:protein2genome:local exon 746103 746795 . - . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 746103 746795 766 - . alignment_id 0 ; Query GL50803_14362-t26_1-p1 ; Align 746796 1 381 ; Align 746412 128 36 ; Align 746373 140 270 utg47_pilon exonerate:protein2genome:local gene 750678 752564 3084 + . gene_id 0 ; sequence GL50803_14364-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 750678 752564 . + . utg47_pilon exonerate:protein2genome:local exon 750678 752564 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 750678 752564 3084 + . alignment_id 0 ; Query GL50803_14364-t26_1-p1 ; Align 750678 1 1887 utg349_pilon exonerate:protein2genome:local gene 1471542 1473464 2755 - . gene_id 0 ; sequence GL50803_14367-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1471542 1473464 . - . utg349_pilon exonerate:protein2genome:local exon 1471542 1473464 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1471542 1473464 2755 - . alignment_id 0 ; Query GL50803_14367-t26_1-p1 ; Align 1473465 1 183 ; Align 1473282 63 1740 utg349_pilon exonerate:protein2genome:local gene 1475514 1476197 888 - . gene_id 0 ; sequence GL50803_14369-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1475514 1476197 . - . utg349_pilon exonerate:protein2genome:local exon 1475514 1476197 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1475514 1476197 888 - . alignment_id 0 ; Query GL50803_14369-t26_1-p1 ; Align 1476198 1 516 ; Align 1475682 174 168 utg731_pilon exonerate:protein2genome:local gene 1256786 1258997 3659 - . gene_id 0 ; sequence GL50803_14373-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1256786 1258997 . - . utg731_pilon exonerate:protein2genome:local exon 1256786 1258997 . - . insertions 12 ; deletions 0 ; frameshifts 4 utg731_pilon exonerate:protein2genome:local similarity 1256786 1258997 3659 - . alignment_id 0 ; Query GL50803_14373-t26_1-p1 ; Align 1258998 1 1605 ; Align 1257390 536 93 ; Align 1257291 567 120 ; Align 1257167 607 3 ; Align 1257161 608 375 utg731_pilon exonerate:protein2genome:local gene 1259949 1261583 2501 - . gene_id 0 ; sequence GL50803_14374-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1259949 1261583 . - . utg731_pilon exonerate:protein2genome:local exon 1259949 1261583 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1259949 1261583 2501 - . alignment_id 0 ; Query GL50803_14374-t26_1-p1 ; Align 1261584 1 1635 utg731_pilon exonerate:protein2genome:local gene 1261659 1263302 2634 - . gene_id 0 ; sequence GL50803_14375-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1261659 1263302 . - . utg731_pilon exonerate:protein2genome:local exon 1261659 1263302 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1261659 1263302 2634 - . alignment_id 0 ; Query GL50803_14375-t26_1-p1 ; Align 1263303 1 1644 utg11_pilon exonerate:protein2genome:local gene 1096495 1097940 2052 + . gene_id 0 ; sequence GL50803_14380-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1096495 1097940 . + . utg11_pilon exonerate:protein2genome:local exon 1096495 1097940 . + . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 1096495 1097940 2052 + . alignment_id 0 ; Query GL50803_14380-t26_1-p1 ; Align 1096495 1 486 ; Align 1096981 166 960 utg11_pilon exonerate:protein2genome:local gene 1098766 1099740 1451 - . gene_id 0 ; sequence GL50803_14381-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1098766 1099740 . - . utg11_pilon exonerate:protein2genome:local exon 1098766 1099740 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1098766 1099740 1451 - . alignment_id 0 ; Query GL50803_14381-t26_1-p1 ; Align 1099741 13 975 utg212_pilon exonerate:protein2genome:local gene 95352 98024 4257 + . gene_id 0 ; sequence GL50803_14390-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 95352 98024 . + . utg212_pilon exonerate:protein2genome:local exon 95352 98024 . + . insertions 9 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 95352 98024 4257 + . alignment_id 0 ; Query GL50803_14390-t26_1-p1 ; Align 95352 3 1827 ; Align 97188 612 837 utg47_pilon exonerate:protein2genome:local gene 1588258 1592088 5048 + . gene_id 0 ; sequence GL50803_14391-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1588258 1592088 . + . utg47_pilon exonerate:protein2genome:local exon 1588258 1592088 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1588258 1592088 5048 + . alignment_id 0 ; Query GL50803_14391-t26_1-p1 ; Align 1588258 1 3831 utg47_pilon exonerate:protein2genome:local gene 1592112 1593050 1496 - . gene_id 0 ; sequence GL50803_14392-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1592112 1593050 . - . utg47_pilon exonerate:protein2genome:local exon 1592112 1593050 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1592112 1593050 1496 - . alignment_id 0 ; Query GL50803_14392-t26_1-p1 ; Align 1593051 1 939 utg64_pilon exonerate:protein2genome:local gene 403939 404562 784 + . gene_id 0 ; sequence GL50803_14400-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 403939 404562 . + . utg64_pilon exonerate:protein2genome:local exon 403939 404562 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 403939 404562 784 + . alignment_id 0 ; Query GL50803_14400-t26_1-p1 ; Align 403939 139 624 utg64_pilon exonerate:protein2genome:local gene 396574 399057 2556 + . gene_id 0 ; sequence GL50803_14401-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 396574 398218 . + . utg64_pilon exonerate:protein2genome:local exon 396574 398218 . + . insertions 6 ; deletions 6 utg64_pilon exonerate:protein2genome:local splice5 398219 398220 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 398219 398281 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 398280 398281 . + . intron_id 0 ; splice_site "TG" utg64_pilon exonerate:protein2genome:local cds 398282 399057 . + . utg64_pilon exonerate:protein2genome:local exon 398282 399057 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 396574 399057 2556 + . alignment_id 0 ; Query GL50803_14401-t26_1-p1 ; Align 396574 110 705 ; Align 397279 346 48 ; Align 397327 366 24 ; Align 397351 375 696 ; Align 398053 607 165 ; Align 398284 663 483 ; Align 398770 824 288 utg349_pilon exonerate:protein2genome:local gene 224232 225518 2128 + . gene_id 0 ; sequence GL50803_14403-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 224232 225518 . + . utg349_pilon exonerate:protein2genome:local exon 224232 225518 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 224232 225518 2128 + . alignment_id 0 ; Query GL50803_14403-t26_1-p1 ; Align 224232 4 1287 utg349_pilon exonerate:protein2genome:local gene 222946 224100 1968 - . gene_id 0 ; sequence GL50803_14404-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 222946 224100 . - . utg349_pilon exonerate:protein2genome:local exon 222946 224100 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 222946 224100 1968 - . alignment_id 0 ; Query GL50803_14404-t26_1-p1 ; Align 224101 1 1155 utg731_pilon exonerate:protein2genome:local gene 441529 442812 1137 + . gene_id 0 ; sequence GL50803_14407-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 441529 442812 . + . utg731_pilon exonerate:protein2genome:local exon 441529 442812 . + . insertions 0 ; deletions 12 utg731_pilon exonerate:protein2genome:local similarity 441529 442812 1137 + . alignment_id 0 ; Query GL50803_14407-t26_1-p1 ; Align 441529 1 63 ; Align 441592 24 48 ; Align 441640 43 186 ; Align 441826 108 531 ; Align 442357 289 456 utg731_pilon exonerate:protein2genome:local gene 446533 447687 1332 - . gene_id 0 ; sequence GL50803_14408-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 446533 447687 . - . utg731_pilon exonerate:protein2genome:local exon 446533 447687 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 446533 447687 1332 - . alignment_id 0 ; Query GL50803_14408-t26_1-p1 ; Align 447688 1 360 ; Align 447328 123 795 utg11_pilon exonerate:protein2genome:local gene 1613774 1614140 503 + . gene_id 0 ; sequence GL50803_14413-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1613774 1614140 . + . utg11_pilon exonerate:protein2genome:local exon 1613774 1614140 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 1613774 1614140 503 + . alignment_id 0 ; Query GL50803_14413-t26_1-p1 ; Align 1613774 1 96 ; Align 1613871 33 270 utg349_pilon exonerate:protein2genome:local gene 1183829 1185814 2678 + . gene_id 0 ; sequence GL50803_14433-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1183829 1185814 . + . utg349_pilon exonerate:protein2genome:local exon 1183829 1185814 . + . insertions 18 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1183829 1185814 2678 + . alignment_id 0 ; Query GL50803_14433-t26_1-p1 ; Align 1183829 1 978 ; Align 1184822 327 33 ; Align 1184855 339 480 ; Align 1185338 499 477 utg349_pilon exonerate:protein2genome:local gene 1185856 1187211 2062 + . gene_id 0 ; sequence GL50803_14434-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1185856 1187211 . + . utg349_pilon exonerate:protein2genome:local exon 1185856 1187211 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1185856 1187211 2062 + . alignment_id 0 ; Query GL50803_14434-t26_1-p1 ; Align 1185856 1 1356 utg349_pilon exonerate:protein2genome:local gene 1190678 1193095 3224 - . gene_id 0 ; sequence GL50803_14436-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1190678 1193095 . - . utg349_pilon exonerate:protein2genome:local exon 1190678 1193095 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1190678 1193095 3224 - . alignment_id 0 ; Query GL50803_14436-t26_1-p1 ; Align 1193096 1 1575 ; Align 1191521 527 843 utg47_pilon exonerate:protein2genome:local gene 2219978 2220976 1558 + . gene_id 0 ; sequence GL50803_14438-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2219978 2220976 . + . utg47_pilon exonerate:protein2genome:local exon 2219978 2220976 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2219978 2220976 1558 + . alignment_id 0 ; Query GL50803_14438-t26_1-p1 ; Align 2219978 1 999 utg64_pilon exonerate:protein2genome:local gene 523224 525227 2828 - . gene_id 0 ; sequence GL50803_14450-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 523224 525227 . - . utg64_pilon exonerate:protein2genome:local exon 523224 525227 . - . insertions 0 ; deletions 2 ; frameshifts 6 utg64_pilon exonerate:protein2genome:local similarity 523224 525227 2828 - . alignment_id 0 ; Query GL50803_14450-t26_1-p1 ; Align 525228 1 432 ; Align 524795 145 471 ; Align 524324 303 3 ; Align 524319 304 57 ; Align 524261 324 270 ; Align 523989 414 765 utg64_pilon exonerate:protein2genome:local gene 521522 523161 2528 + . gene_id 0 ; sequence GL50803_14451-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 521522 523161 . + . utg64_pilon exonerate:protein2genome:local exon 521522 523161 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 521522 523161 2528 + . alignment_id 0 ; Query GL50803_14451-t26_1-p1 ; Align 521522 1 1071 ; Align 522595 359 567 utg47_pilon exonerate:protein2genome:local gene 522708 523169 739 + . gene_id 0 ; sequence GL50803_14456-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 522708 523169 . + . utg47_pilon exonerate:protein2genome:local exon 522708 523169 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 522708 523169 739 + . alignment_id 0 ; Query GL50803_14456-t26_1-p1 ; Align 522708 1 462 utg47_pilon exonerate:protein2genome:local gene 522410 522595 333 - . gene_id 0 ; sequence GL50803_14457-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 522410 522595 . - . utg47_pilon exonerate:protein2genome:local exon 522410 522595 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 522410 522595 333 - . alignment_id 0 ; Query GL50803_14457-t26_1-p1 ; Align 522596 1 186 utg47_pilon exonerate:protein2genome:local gene 519468 520073 734 + . gene_id 0 ; sequence GL50803_14458-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 519468 520073 . + . utg47_pilon exonerate:protein2genome:local exon 519468 520073 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 519468 520073 734 + . alignment_id 0 ; Query GL50803_14458-t26_1-p1 ; Align 519468 1 606 utg47_pilon exonerate:protein2genome:local gene 1774396 1775706 1438 - . gene_id 0 ; sequence GL50803_14460-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1774396 1775706 . - . utg47_pilon exonerate:protein2genome:local exon 1774396 1775706 . - . insertions 0 ; deletions 8 utg47_pilon exonerate:protein2genome:local similarity 1774396 1775706 1438 - . alignment_id 0 ; Query GL50803_14460-t26_1-p1 ; Align 1775707 1 630 ; Align 1775077 213 435 ; Align 1774642 363 147 ; Align 1774495 413 99 utg64_pilon exonerate:protein2genome:local gene 728604 729320 1143 - . gene_id 0 ; sequence GL50803_14469-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 728604 729320 . - . utg64_pilon exonerate:protein2genome:local exon 728604 729320 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 728604 729320 1143 - . alignment_id 0 ; Query GL50803_14469-t26_1-p1 ; Align 729321 1 717 utg64_pilon exonerate:protein2genome:local gene 733421 735919 3195 - . gene_id 0 ; sequence GL50803_14471-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 733421 735919 . - . utg64_pilon exonerate:protein2genome:local exon 733421 735919 . - . insertions 9 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 733421 735919 3195 - . alignment_id 0 ; Query GL50803_14471-t26_1-p1 ; Align 735920 1 606 ; Align 735308 203 81 ; Align 735224 230 519 ; Align 734705 404 1284 utg18_pilon exonerate:protein2genome:local gene 165587 169024 4421 - . gene_id 0 ; sequence GL50803_14475-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 165587 169024 . - . utg18_pilon exonerate:protein2genome:local exon 165587 169024 . - . insertions 12 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 165587 169024 4421 - . alignment_id 0 ; Query GL50803_14475-t26_1-p1 ; Align 169025 1 438 ; Align 168587 148 1194 ; Align 167390 546 885 ; Align 166496 841 909 utg265_pilon exonerate:protein2genome:local gene 95166 95867 657 - . gene_id 0 ; sequence GL50803_14478-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 95166 95867 . - . utg265_pilon exonerate:protein2genome:local exon 95166 95867 . - . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 95166 95867 657 - . alignment_id 0 ; Query GL50803_14478-t26_1-p1 ; Align 95868 1 207 ; Align 95658 70 180 ; Align 95475 130 309 utg265_pilon exonerate:protein2genome:local gene 86299 89421 4365 + . gene_id 0 ; sequence GL50803_14480-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 86299 89421 . + . utg265_pilon exonerate:protein2genome:local exon 86299 89421 . + . insertions 12 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 86299 89421 4365 + . alignment_id 0 ; Query GL50803_14480-t26_1-p1 ; Align 86299 1 1083 ; Align 87394 362 2028 utg265_pilon exonerate:protein2genome:local gene 81755 82156 703 - . gene_id 0 ; sequence GL50803_14481-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 81755 82156 . - . utg265_pilon exonerate:protein2genome:local exon 81755 82156 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 81755 82156 703 - . alignment_id 0 ; Query GL50803_14481-t26_1-p1 ; Align 82157 1 402 utg265_pilon exonerate:protein2genome:local gene 79268 79969 952 + . gene_id 0 ; sequence GL50803_14482-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 79268 79969 . + . utg265_pilon exonerate:protein2genome:local exon 79268 79969 . + . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 79268 79969 952 + . alignment_id 0 ; Query GL50803_14482-t26_1-p1 ; Align 79268 2 414 ; Align 79682 141 288 utg349_pilon exonerate:protein2genome:local gene 1322240 1323355 1679 - . gene_id 0 ; sequence GL50803_14485-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1322240 1323355 . - . utg349_pilon exonerate:protein2genome:local exon 1322240 1323355 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1322240 1323355 1679 - . alignment_id 0 ; Query GL50803_14485-t26_1-p1 ; Align 1323356 1 1116 utg349_pilon exonerate:protein2genome:local gene 1330044 1330703 988 + . gene_id 0 ; sequence GL50803_14486-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1330044 1330703 . + . utg349_pilon exonerate:protein2genome:local exon 1330044 1330703 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1330044 1330703 988 + . alignment_id 0 ; Query GL50803_14486-t26_1-p1 ; Align 1330044 7 660 utg47_pilon exonerate:protein2genome:local gene 376841 379214 2759 + . gene_id 0 ; sequence GL50803_14487-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 376841 379214 . + . utg47_pilon exonerate:protein2genome:local exon 376841 379214 . + . insertions 3 ; deletions 5 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 376841 379214 2759 + . alignment_id 0 ; Query GL50803_14487-t26_1-p1 ; Align 376841 1 597 ; Align 377441 200 486 ; Align 377927 363 93 ; Align 378020 396 603 ; Align 378624 597 105 ; Align 378729 633 105 ; Align 378834 669 381 utg47_pilon exonerate:protein2genome:local gene 374997 376013 1435 - . gene_id 0 ; sequence GL50803_14488-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 374997 376013 . - . utg47_pilon exonerate:protein2genome:local exon 374997 376013 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 374997 376013 1435 - . alignment_id 0 ; Query GL50803_14488-t26_1-p1 ; Align 376014 14 1017 utg47_pilon exonerate:protein2genome:local gene 240364 370054 2669 - . gene_id 0 ; sequence GL50803_14490-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 367929 370054 . - . utg47_pilon exonerate:protein2genome:local exon 367929 370054 . - . insertions 0 ; deletions 4 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local splice5 367927 367928 . - . intron_id 1 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local intron 240381 367928 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 240381 240382 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 240364 240380 . - . utg47_pilon exonerate:protein2genome:local exon 240364 240380 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 240364 370054 2669 - . alignment_id 0 ; Query GL50803_14490-t26_1-p1 ; Align 370055 1 258 ; Align 369796 87 1638 ; Align 368158 637 228 ; Align 240379 714 15 utg308_pilon exonerate:protein2genome:local gene 372650 374101 2189 - . gene_id 0 ; sequence GL50803_14492-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 372650 374101 . - . utg308_pilon exonerate:protein2genome:local exon 372650 374101 . - . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 372650 374101 2189 - . alignment_id 0 ; Query GL50803_14492-t26_1-p1 ; Align 374102 1 783 ; Align 373319 264 669 utg731_pilon exonerate:protein2genome:local gene 1523327 1523866 729 - . gene_id 0 ; sequence GL50803_14493-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1523327 1523866 . - . utg731_pilon exonerate:protein2genome:local exon 1523327 1523866 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1523327 1523866 729 - . alignment_id 0 ; Query GL50803_14493-t26_1-p1 ; Align 1523867 1 540 utg731_pilon exonerate:protein2genome:local gene 1523955 1524386 396 - . gene_id 0 ; sequence GL50803_14494-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1523955 1524386 . - . utg731_pilon exonerate:protein2genome:local exon 1523955 1524386 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1523955 1524386 396 - . alignment_id 0 ; Query GL50803_14494-t26_1-p1 ; Align 1524387 42 72 ; Align 1524312 66 357 utg11_pilon exonerate:protein2genome:local gene 667813 668544 1209 - . gene_id 0 ; sequence GL50803_14497-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 667813 668544 . - . utg11_pilon exonerate:protein2genome:local exon 667813 668544 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 667813 668544 1209 - . alignment_id 0 ; Query GL50803_14497-t26_1-p1 ; Align 668545 1 732 utg11_pilon exonerate:protein2genome:local gene 670498 671706 2072 - . gene_id 0 ; sequence GL50803_14498-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 670498 671706 . - . utg11_pilon exonerate:protein2genome:local exon 670498 671706 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 670498 671706 2072 - . alignment_id 0 ; Query GL50803_14498-t26_1-p1 ; Align 671707 1 1209 utg11_pilon exonerate:protein2genome:local gene 1384551 1385714 1820 + . gene_id 0 ; sequence GL50803_14507-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1384551 1385714 . + . utg11_pilon exonerate:protein2genome:local exon 1384551 1385714 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1384551 1385714 1820 + . alignment_id 0 ; Query GL50803_14507-t26_1-p1 ; Align 1384551 1 1164 utg11_pilon exonerate:protein2genome:local gene 1393448 1395987 3369 - . gene_id 0 ; sequence GL50803_14509-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1393448 1395987 . - . utg11_pilon exonerate:protein2genome:local exon 1393448 1395987 . - . insertions 0 ; deletions 0 ; frameshifts 5 utg11_pilon exonerate:protein2genome:local similarity 1393448 1395987 3369 - . alignment_id 0 ; Query GL50803_14509-t26_1-p1 ; Align 1395988 1 84 ; Align 1395899 29 2451 utg11_pilon exonerate:protein2genome:local gene 1396663 1399605 4293 - . gene_id 0 ; sequence GL50803_14510-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1396663 1399605 . - . utg11_pilon exonerate:protein2genome:local exon 1396663 1399605 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1396663 1399605 4293 - . alignment_id 0 ; Query GL50803_14510-t26_1-p1 ; Align 1399606 1 2943 utg731_pilon exonerate:protein2genome:local gene 744775 746073 2093 - . gene_id 0 ; sequence GL50803_14519-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 744775 746073 . - . utg731_pilon exonerate:protein2genome:local exon 744775 746073 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 744775 746073 2093 - . alignment_id 0 ; Query GL50803_14519-t26_1-p1 ; Align 746074 1 1299 utg731_pilon exonerate:protein2genome:local gene 743995 744762 1040 + . gene_id 0 ; sequence GL50803_14520-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 743995 744762 . + . utg731_pilon exonerate:protein2genome:local exon 743995 744762 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 743995 744762 1040 + . alignment_id 0 ; Query GL50803_14520-t26_1-p1 ; Align 743995 1 768 utg731_pilon exonerate:protein2genome:local gene 739530 740132 1074 + . gene_id 0 ; sequence GL50803_14521-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 739530 740132 . + . utg731_pilon exonerate:protein2genome:local exon 739530 740132 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 739530 740132 1074 + . alignment_id 0 ; Query GL50803_14521-t26_1-p1 ; Align 739530 1 603 utg47_pilon exonerate:protein2genome:local gene 818551 819600 1583 + . gene_id 0 ; sequence GL50803_14525-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 818551 819600 . + . utg47_pilon exonerate:protein2genome:local exon 818551 819600 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 818551 819600 1583 + . alignment_id 0 ; Query GL50803_14525-t26_1-p1 ; Align 818551 6 849 ; Align 819406 289 195 utg212_pilon exonerate:protein2genome:local gene 455915 456982 1345 + . gene_id 0 ; sequence GL50803_14534-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 455915 456982 . + . utg212_pilon exonerate:protein2genome:local exon 455915 456982 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 455915 456982 1345 + . alignment_id 0 ; Query GL50803_14534-t26_1-p1 ; Align 455915 2 1068 utg212_pilon exonerate:protein2genome:local gene 442539 446177 5203 - . gene_id 0 ; sequence GL50803_14539-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 442539 446177 . - . utg212_pilon exonerate:protein2genome:local exon 442539 446177 . - . insertions 12 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 442539 446177 5203 - . alignment_id 0 ; Query GL50803_14539-t26_1-p1 ; Align 446178 1 1272 ; Align 444903 425 138 ; Align 444759 471 51 ; Align 444705 488 2166 utg212_pilon exonerate:protein2genome:local gene 144907 146140 1697 + . gene_id 0 ; sequence GL50803_14543-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 144907 146140 . + . utg212_pilon exonerate:protein2genome:local exon 144907 146140 . + . insertions 3 ; deletions 4 ; frameshifts 4 utg212_pilon exonerate:protein2genome:local similarity 144907 146140 1697 + . alignment_id 0 ; Query GL50803_14543-t26_1-p1 ; Align 144907 357 123 ; Align 145030 401 27 ; Align 145057 411 96 ; Align 145156 443 3 ; Align 145163 444 978 utg212_pilon exonerate:protein2genome:local gene 143086 143715 965 + . gene_id 0 ; sequence GL50803_14544-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 143086 143715 . + . utg212_pilon exonerate:protein2genome:local exon 143086 143715 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 143086 143715 965 + . alignment_id 0 ; Query GL50803_14544-t26_1-p1 ; Align 143086 1 630 utg212_pilon exonerate:protein2genome:local gene 142079 143059 1634 - . gene_id 0 ; sequence GL50803_14545-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 142079 143059 . - . utg212_pilon exonerate:protein2genome:local exon 142079 143059 . - . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local similarity 142079 143059 1634 - . alignment_id 0 ; Query GL50803_14545-t26_1-p1 ; Align 143060 1 969 ; Align 142091 325 12 utg212_pilon exonerate:protein2genome:local gene 141315 141998 966 - . gene_id 0 ; sequence GL50803_14546-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 141315 141998 . - . utg212_pilon exonerate:protein2genome:local exon 141315 141998 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 141315 141998 966 - . alignment_id 0 ; Query GL50803_14546-t26_1-p1 ; Align 141999 1 684 utg212_pilon exonerate:protein2genome:local gene 140164 141303 1621 + . gene_id 0 ; sequence GL50803_14547-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 140164 141303 . + . utg212_pilon exonerate:protein2genome:local exon 140164 141303 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 140164 141303 1621 + . alignment_id 0 ; Query GL50803_14547-t26_1-p1 ; Align 140164 1 1140 utg18_pilon exonerate:protein2genome:local gene 358839 359729 1453 - . gene_id 0 ; sequence GL50803_14551-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 358839 359729 . - . utg18_pilon exonerate:protein2genome:local exon 358839 359729 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 358839 359729 1453 - . alignment_id 0 ; Query GL50803_14551-t26_1-p1 ; Align 359730 1 891 utg18_pilon exonerate:protein2genome:local gene 361711 362697 1432 - . gene_id 0 ; sequence GL50803_14552-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 361711 362697 . - . utg18_pilon exonerate:protein2genome:local exon 361711 362697 . - . insertions 0 ; deletions 5 utg18_pilon exonerate:protein2genome:local similarity 361711 362697 1432 - . alignment_id 0 ; Query GL50803_14552-t26_1-p1 ; Align 362698 2 624 ; Align 362074 215 363 utg18_pilon exonerate:protein2genome:local gene 366150 366491 517 - . gene_id 0 ; sequence GL50803_14553-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 366150 366491 . - . utg18_pilon exonerate:protein2genome:local exon 366150 366491 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 366150 366491 517 - . alignment_id 0 ; Query GL50803_14553-t26_1-p1 ; Align 366492 1 342 utg64_pilon exonerate:protein2genome:local gene 878367 878984 719 + . gene_id 0 ; sequence GL50803_14560-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 878367 878984 . + . utg64_pilon exonerate:protein2genome:local exon 878367 878984 . + . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 878367 878984 719 + . alignment_id 0 ; Query GL50803_14560-t26_1-p1 ; Align 878367 1 258 ; Align 878625 88 168 ; Align 878793 145 192 utg11_pilon exonerate:protein2genome:local gene 901298 901948 912 - . gene_id 0 ; sequence GL50803_14565-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 901298 901948 . - . utg11_pilon exonerate:protein2genome:local exon 901298 901948 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 901298 901948 912 - . alignment_id 0 ; Query GL50803_14565-t26_1-p1 ; Align 901949 1 651 utg11_pilon exonerate:protein2genome:local gene 897439 899049 2501 - . gene_id 0 ; sequence GL50803_14566-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 897439 899049 . - . utg11_pilon exonerate:protein2genome:local exon 897439 899049 . - . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 897439 899049 2501 - . alignment_id 0 ; Query GL50803_14566-t26_1-p1 ; Align 899050 1 513 ; Align 898537 176 1098 utg11_pilon exonerate:protein2genome:local gene 895955 896503 730 - . gene_id 0 ; sequence GL50803_14567-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 895955 896503 . - . utg11_pilon exonerate:protein2genome:local exon 895955 896503 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 895955 896503 730 - . alignment_id 0 ; Query GL50803_14567-t26_1-p1 ; Align 896504 19 549 utg11_pilon exonerate:protein2genome:local gene 892379 893353 1751 + . gene_id 0 ; sequence GL50803_14568-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 892379 893353 . + . utg11_pilon exonerate:protein2genome:local exon 892379 893353 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 892379 893353 1751 + . alignment_id 0 ; Query GL50803_14568-t26_1-p1 ; Align 892379 1 975 utg11_pilon exonerate:protein2genome:local gene 890448 892184 2161 + . gene_id 0 ; sequence GL50803_14569-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 890448 892184 . + . utg11_pilon exonerate:protein2genome:local exon 890448 892184 . + . insertions 3 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 890448 892184 2161 + . alignment_id 0 ; Query GL50803_14569-t26_1-p1 ; Align 890448 6 1029 ; Align 891477 350 171 ; Align 891648 410 426 ; Align 892077 552 108 utg11_pilon exonerate:protein2genome:local gene 241937 243430 2298 - . gene_id 0 ; sequence GL50803_14573-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 241937 243430 . - . utg11_pilon exonerate:protein2genome:local exon 241937 243430 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 241937 243430 2298 - . alignment_id 0 ; Query GL50803_14573-t26_1-p1 ; Align 243431 1 1494 utg265_pilon exonerate:protein2genome:local gene 700555 702186 2187 + . gene_id 0 ; sequence GL50803_14578-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 700555 702186 . + . utg265_pilon exonerate:protein2genome:local exon 700555 702186 . + . insertions 3 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 700555 702186 2187 + . alignment_id 0 ; Query GL50803_14578-t26_1-p1 ; Align 700555 2 873 ; Align 701431 293 705 ; Align 702136 529 51 utg731_pilon exonerate:protein2genome:local gene 767936 769879 2919 + . gene_id 0 ; sequence GL50803_14581-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 767936 768752 . + . utg731_pilon exonerate:protein2genome:local exon 767936 768752 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local splice5 768753 768754 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 768753 768782 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 768781 768782 . + . intron_id 0 ; splice_site "TG" utg731_pilon exonerate:protein2genome:local cds 768783 769879 . + . utg731_pilon exonerate:protein2genome:local exon 768783 769879 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 767936 769879 2919 + . alignment_id 0 ; Query GL50803_14581-t26_1-p1 ; Align 767936 1 804 ; Align 768740 270 12 ; Align 768785 275 1095 utg731_pilon exonerate:protein2genome:local gene 762065 762601 894 - . gene_id 0 ; sequence GL50803_14583-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 762065 762601 . - . utg731_pilon exonerate:protein2genome:local exon 762065 762601 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 762065 762601 894 - . alignment_id 0 ; Query GL50803_14583-t26_1-p1 ; Align 762602 6 537 utg731_pilon exonerate:protein2genome:local gene 759011 762031 3276 + . gene_id 0 ; sequence GL50803_14584-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 759011 760763 . + . utg731_pilon exonerate:protein2genome:local exon 759011 760763 . + . insertions 6 ; deletions 5 utg731_pilon exonerate:protein2genome:local splice5 760764 760765 . + . intron_id 1 ; splice_site "TT" utg731_pilon exonerate:protein2genome:local intron 760764 760799 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 760798 760799 . + . intron_id 0 ; splice_site "TG" utg731_pilon exonerate:protein2genome:local cds 760800 761036 . + . utg731_pilon exonerate:protein2genome:local exon 760800 761036 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 761037 761038 . + . intron_id 2 ; splice_site "TT" utg731_pilon exonerate:protein2genome:local intron 761037 761075 . + . intron_id 2 utg731_pilon exonerate:protein2genome:local splice3 761074 761075 . + . intron_id 1 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 761076 761249 . + . utg731_pilon exonerate:protein2genome:local exon 761076 761249 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 761250 761251 . + . intron_id 3 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local intron 761250 761279 . + . intron_id 3 utg731_pilon exonerate:protein2genome:local splice3 761278 761279 . + . intron_id 2 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 761280 762031 . + . utg731_pilon exonerate:protein2genome:local exon 761280 762031 . + . insertions 9 ; deletions 10 utg731_pilon exonerate:protein2genome:local similarity 759011 762031 3276 + . alignment_id 0 ; Query GL50803_14584-t26_1-p1 ; Align 759011 1 1275 ; Align 760292 426 126 ; Align 760418 469 6 ; Align 760424 474 225 ; Align 760649 550 114 ; Align 760802 589 234 ; Align 761078 668 171 ; Align 761282 726 81 ; Align 761363 755 6 ; Align 761369 758 135 ; Align 761504 807 24 ; Align 761528 817 213 ; Align 761741 889 78 ; Align 761828 915 204 utg11_pilon exonerate:protein2genome:local gene 1178709 1798130 1868 - . gene_id 0 ; sequence GL50803_14586-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1797543 1798130 . - . utg11_pilon exonerate:protein2genome:local exon 1797543 1798130 . - . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1797541 1797542 . - . intron_id 1 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 1631217 1797542 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1631217 1631218 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1631107 1631216 . - . utg11_pilon exonerate:protein2genome:local exon 1631107 1631216 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1631105 1631106 . - . intron_id 2 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 1629764 1631106 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 1629764 1629765 . - . intron_id 1 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 1629591 1629763 . - . utg11_pilon exonerate:protein2genome:local exon 1629591 1629763 . - . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local splice5 1629589 1629590 . - . intron_id 3 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 1452855 1629590 . - . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 1452855 1452856 . - . intron_id 2 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 1452774 1452854 . - . utg11_pilon exonerate:protein2genome:local exon 1452774 1452854 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1452772 1452773 . - . intron_id 4 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1347387 1452773 . - . intron_id 4 utg11_pilon exonerate:protein2genome:local splice3 1347387 1347388 . - . intron_id 3 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local cds 1346352 1347386 . - . utg11_pilon exonerate:protein2genome:local exon 1346352 1347386 . - . insertions 6 ; deletions 6 utg11_pilon exonerate:protein2genome:local splice5 1346350 1346351 . - . intron_id 5 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 1178834 1346351 . - . intron_id 5 utg11_pilon exonerate:protein2genome:local splice3 1178834 1178835 . - . intron_id 4 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local cds 1178709 1178833 . - . utg11_pilon exonerate:protein2genome:local exon 1178709 1178833 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1178709 1798130 1868 - . alignment_id 0 ; Query GL50803_14586-t26_1-p1 ; Align 1798131 22 123 ; Align 1798005 63 174 ; Align 1797831 122 288 ; Align 1631217 218 51 ; Align 1631166 236 57 ; Align 1629763 256 81 ; Align 1629682 286 90 ; Align 1452853 317 78 ; Align 1347385 344 48 ; Align 1347337 362 135 ; Align 1347202 411 630 ; Align 1346566 621 213 ; Align 1178832 693 123 utg731_pilon exonerate:protein2genome:local gene 588451 588906 682 - . gene_id 0 ; sequence GL50803_14589-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 588451 588906 . - . utg731_pilon exonerate:protein2genome:local exon 588451 588906 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 588451 588906 682 - . alignment_id 0 ; Query GL50803_14589-t26_1-p1 ; Align 588907 1 456 utg349_pilon exonerate:protein2genome:local gene 813285 818879 7754 - . gene_id 0 ; sequence GL50803_14593-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 813285 818879 . - . utg349_pilon exonerate:protein2genome:local exon 813285 818879 . - . insertions 0 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 813285 818879 7754 - . alignment_id 0 ; Query GL50803_14593-t26_1-p1 ; Align 818880 1 1026 ; Align 817854 345 594 ; Align 817260 545 3975 utg731_pilon exonerate:protein2genome:local gene 357185 358529 1324 + . gene_id 0 ; sequence GL50803_14599-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 357185 358529 . + . utg731_pilon exonerate:protein2genome:local exon 357185 358529 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 357185 358529 1324 + . alignment_id 0 ; Query GL50803_14599-t26_1-p1 ; Align 357185 1 123 ; Align 357309 42 1221 utg731_pilon exonerate:protein2genome:local gene 355504 357279 2472 + . gene_id 0 ; sequence GL50803_14601-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 355504 357279 . + . utg731_pilon exonerate:protein2genome:local exon 355504 357279 . + . insertions 15 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 355504 357279 2472 + . alignment_id 0 ; Query GL50803_14601-t26_1-p1 ; Align 355504 1 402 ; Align 355915 135 21 ; Align 355942 142 930 ; Align 356872 454 408 utg731_pilon exonerate:protein2genome:local gene 350244 352799 3364 - . gene_id 0 ; sequence GL50803_14602-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 350244 352799 . - . utg731_pilon exonerate:protein2genome:local exon 350244 352799 . - . insertions 6 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 350244 352799 3364 - . alignment_id 0 ; Query GL50803_14602-t26_1-p1 ; Align 352800 1 462 ; Align 352338 157 603 ; Align 351735 359 1308 ; Align 350421 795 177 utg731_pilon exonerate:protein2genome:local gene 349243 350220 1506 - . gene_id 0 ; sequence GL50803_14603-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 349243 350220 . - . utg731_pilon exonerate:protein2genome:local exon 349243 350220 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 349243 350220 1506 - . alignment_id 0 ; Query GL50803_14603-t26_1-p1 ; Align 350221 1 978 utg731_pilon exonerate:protein2genome:local gene 347882 349117 1942 - . gene_id 0 ; sequence GL50803_14604-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 347882 349117 . - . utg731_pilon exonerate:protein2genome:local exon 347882 349117 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 347882 349117 1942 - . alignment_id 0 ; Query GL50803_14604-t26_1-p1 ; Align 349118 1 1236 utg349_pilon exonerate:protein2genome:local gene 1216280 1217017 1232 - . gene_id 0 ; sequence GL50803_14606-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1216280 1217017 . - . utg349_pilon exonerate:protein2genome:local exon 1216280 1217017 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1216280 1217017 1232 - . alignment_id 0 ; Query GL50803_14606-t26_1-p1 ; Align 1217018 1 738 utg349_pilon exonerate:protein2genome:local gene 1211439 1213943 2928 - . gene_id 0 ; sequence GL50803_14607-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1211439 1213943 . - . utg349_pilon exonerate:protein2genome:local exon 1211439 1213943 . - . insertions 3 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 1211439 1213943 2928 - . alignment_id 0 ; Query GL50803_14607-t26_1-p1 ; Align 1213944 1 732 ; Align 1213209 245 837 ; Align 1212372 528 933 utg349_pilon exonerate:protein2genome:local gene 1209569 1211422 2435 - . gene_id 0 ; sequence GL50803_14608-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1209569 1211422 . - . utg349_pilon exonerate:protein2genome:local exon 1209569 1211422 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1209569 1211422 2435 - . alignment_id 0 ; Query GL50803_14608-t26_1-p1 ; Align 1211423 1 1854 utg99_pilon exonerate:protein2genome:local gene 28354 28800 765 + . gene_id 0 ; sequence GL50803_14614-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 28354 28800 . + . utg99_pilon exonerate:protein2genome:local exon 28354 28800 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 28354 28800 765 + . alignment_id 0 ; Query GL50803_14614-t26_1-p1 ; Align 28354 1 447 utg99_pilon exonerate:protein2genome:local gene 23515 25929 2805 - . gene_id 0 ; sequence GL50803_14615-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 23515 25929 . - . utg99_pilon exonerate:protein2genome:local exon 23515 25929 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 23515 25929 2805 - . alignment_id 0 ; Query GL50803_14615-t26_1-p1 ; Align 25930 1 2415 utg99_pilon exonerate:protein2genome:local gene 19750 20790 820 + . gene_id 0 ; sequence GL50803_14616-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 19750 20790 . + . utg99_pilon exonerate:protein2genome:local exon 19750 20790 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 19750 20790 820 + . alignment_id 0 ; Query GL50803_14616-t26_1-p1 ; Align 19750 1 1041 utg64_pilon exonerate:protein2genome:local gene 41283 42026 1238 - . gene_id 0 ; sequence GL50803_14620-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 41283 42026 . - . utg64_pilon exonerate:protein2genome:local exon 41283 42026 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 41283 42026 1238 - . alignment_id 0 ; Query GL50803_14620-t26_1-p1 ; Align 42027 1 744 utg64_pilon exonerate:protein2genome:local gene 42952 43452 609 + . gene_id 0 ; sequence GL50803_14621-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 42952 43452 . + . utg64_pilon exonerate:protein2genome:local exon 42952 43452 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 42952 43452 609 + . alignment_id 0 ; Query GL50803_14621-t26_1-p1 ; Align 42952 2 240 ; Align 43192 83 261 utg64_pilon exonerate:protein2genome:local gene 45520 46221 1095 - . gene_id 0 ; sequence GL50803_14622-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 45520 46221 . - . utg64_pilon exonerate:protein2genome:local exon 45520 46221 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 45520 46221 1095 - . alignment_id 0 ; Query GL50803_14622-t26_1-p1 ; Align 46222 1 702 utg47_pilon exonerate:protein2genome:local gene 1020056 1021009 1248 + . gene_id 0 ; sequence GL50803_14626-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1020056 1021009 . + . utg47_pilon exonerate:protein2genome:local exon 1020056 1021009 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1020056 1021009 1248 + . alignment_id 0 ; Query GL50803_14626-t26_1-p1 ; Align 1020056 1 954 utg47_pilon exonerate:protein2genome:local gene 1294998 1295564 540 - . gene_id 0 ; sequence GL50803_14627-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1294998 1295564 . - . utg47_pilon exonerate:protein2genome:local exon 1294998 1295564 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1294998 1295564 540 - . alignment_id 0 ; Query GL50803_14627-t26_1-p1 ; Align 1295565 1 399 ; Align 1295166 135 138 ; Align 1295028 183 30 utg47_pilon exonerate:protein2genome:local gene 1344030 1345736 3012 - . gene_id 0 ; sequence GL50803_14628-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1344030 1345736 . - . utg47_pilon exonerate:protein2genome:local exon 1344030 1345736 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1344030 1345736 3012 - . alignment_id 0 ; Query GL50803_14628-t26_1-p1 ; Align 1345737 1 1434 ; Align 1344300 479 270 utg64_pilon exonerate:protein2genome:local gene 783059 786150 3999 + . gene_id 0 ; sequence GL50803_14633-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 783059 786150 . + . utg64_pilon exonerate:protein2genome:local exon 783059 786150 . + . insertions 0 ; deletions 8 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 783059 786150 3999 + . alignment_id 0 ; Query GL50803_14633-t26_1-p1 ; Align 783059 1 435 ; Align 783495 146 276 ; Align 783772 238 288 ; Align 784060 335 300 ; Align 784360 437 504 ; Align 784864 606 693 ; Align 785557 840 567 ; Align 786124 1030 27 utg64_pilon exonerate:protein2genome:local gene 775622 778135 3133 + . gene_id 0 ; sequence GL50803_14636-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 775622 778135 . + . utg64_pilon exonerate:protein2genome:local exon 775622 778135 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 775622 778135 3133 + . alignment_id 0 ; Query GL50803_14636-t26_1-p1 ; Align 775622 1 2514 utg47_pilon exonerate:protein2genome:local gene 2018597 2019103 643 - . gene_id 0 ; sequence GL50803_14637-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2018597 2019103 . - . utg47_pilon exonerate:protein2genome:local exon 2018597 2019103 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2018597 2019103 643 - . alignment_id 0 ; Query GL50803_14637-t26_1-p1 ; Align 2019104 1 507 utg265_pilon exonerate:protein2genome:local gene 601021 602652 2289 - . gene_id 0 ; sequence GL50803_14641-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 601021 602652 . - . utg265_pilon exonerate:protein2genome:local exon 601021 602652 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 601021 602652 2289 - . alignment_id 0 ; Query GL50803_14641-t26_1-p1 ; Align 602653 1 111 ; Align 602542 39 1521 utg265_pilon exonerate:protein2genome:local gene 595856 596212 529 - . gene_id 0 ; sequence GL50803_14642-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 595856 596212 . - . utg265_pilon exonerate:protein2genome:local exon 595856 596212 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 595856 596212 529 - . alignment_id 0 ; Query GL50803_14642-t26_1-p1 ; Align 596213 1 357 utg47_pilon exonerate:protein2genome:local gene 1284450 1285571 1329 - . gene_id 0 ; sequence GL50803_14647-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1284450 1285571 . - . utg47_pilon exonerate:protein2genome:local exon 1284450 1285571 . - . insertions 0 ; deletions 3 ; frameshifts 6 utg47_pilon exonerate:protein2genome:local similarity 1284450 1285571 1329 - . alignment_id 0 ; Query GL50803_14647-t26_1-p1 ; Align 1285572 193 57 ; Align 1285515 213 42 ; Align 1285473 229 357 ; Align 1285115 348 39 ; Align 1285071 361 621 utg47_pilon exonerate:protein2genome:local gene 1289497 1290837 1863 - . gene_id 0 ; sequence GL50803_14648-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1289497 1290837 . - . utg47_pilon exonerate:protein2genome:local exon 1289497 1290837 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1289497 1290837 1863 - . alignment_id 0 ; Query GL50803_14648-t26_1-p1 ; Align 1290838 1 1341 utg47_pilon exonerate:protein2genome:local gene 1290960 1292051 1758 - . gene_id 0 ; sequence GL50803_14649-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1290960 1292051 . - . utg47_pilon exonerate:protein2genome:local exon 1290960 1292051 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1290960 1292051 1758 - . alignment_id 0 ; Query GL50803_14649-t26_1-p1 ; Align 1292052 1 915 ; Align 1291137 307 177 utg47_pilon exonerate:protein2genome:local gene 1292989 1294608 2304 - . gene_id 0 ; sequence GL50803_14650-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1292989 1294608 . - . utg47_pilon exonerate:protein2genome:local exon 1292989 1294608 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1292989 1294608 2304 - . alignment_id 0 ; Query GL50803_14650-t26_1-p1 ; Align 1294609 1 1077 ; Align 1293532 362 543 utg47_pilon exonerate:protein2genome:local gene 1277724 1278167 694 - . gene_id 0 ; sequence GL50803_14651-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1277724 1278167 . - . utg47_pilon exonerate:protein2genome:local exon 1277724 1278167 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1277724 1278167 694 - . alignment_id 0 ; Query GL50803_14651-t26_1-p1 ; Align 1278168 1 444 utg47_pilon exonerate:protein2genome:local gene 957095 958828 2217 - . gene_id 0 ; sequence GL50803_14654-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 957095 958828 . - . utg47_pilon exonerate:protein2genome:local exon 957095 958828 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 957095 958828 2217 - . alignment_id 0 ; Query GL50803_14654-t26_1-p1 ; Align 958829 19 963 ; Align 957866 341 771 utg47_pilon exonerate:protein2genome:local gene 959444 960496 1678 + . gene_id 0 ; sequence GL50803_14655-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 959444 960496 . + . utg47_pilon exonerate:protein2genome:local exon 959444 960496 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 959444 960496 1678 + . alignment_id 0 ; Query GL50803_14655-t26_1-p1 ; Align 959444 1 1053 utg731_pilon exonerate:protein2genome:local gene 1547675 1548001 495 - . gene_id 0 ; sequence GL50803_14660-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1547675 1548001 . - . utg731_pilon exonerate:protein2genome:local exon 1547675 1548001 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1547675 1548001 495 - . alignment_id 0 ; Query GL50803_14660-t26_1-p1 ; Align 1548002 10 327 utg731_pilon exonerate:protein2genome:local gene 1544170 1545576 2277 + . gene_id 0 ; sequence GL50803_14661-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1544170 1545576 . + . utg731_pilon exonerate:protein2genome:local exon 1544170 1545576 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1544170 1545576 2277 + . alignment_id 0 ; Query GL50803_14661-t26_1-p1 ; Align 1544170 1 1407 utg731_pilon exonerate:protein2genome:local gene 1534368 1537079 3304 - . gene_id 0 ; sequence GL50803_14662-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1536851 1537079 . - . utg731_pilon exonerate:protein2genome:local exon 1536851 1537079 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1536849 1536850 . - . intron_id 1 ; splice_site "CT" utg731_pilon exonerate:protein2genome:local intron 1536821 1536850 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1536821 1536822 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1534368 1536820 . - . utg731_pilon exonerate:protein2genome:local exon 1534368 1536820 . - . insertions 3 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1534368 1537079 3304 - . alignment_id 0 ; Query GL50803_14662-t26_1-p1 ; Align 1537080 1 228 ; Align 1536819 78 12 ; Align 1536807 84 1530 ; Align 1535274 594 906 utg64_pilon exonerate:protein2genome:local gene 126147 126947 954 + . gene_id 0 ; sequence GL50803_14668-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 126147 126947 . + . utg64_pilon exonerate:protein2genome:local exon 126147 126947 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 126147 126947 954 + . alignment_id 0 ; Query GL50803_14668-t26_1-p1 ; Align 126147 1 801 utg64_pilon exonerate:protein2genome:local gene 126946 128736 2402 - . gene_id 0 ; sequence GL50803_14669-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 126946 128736 . - . utg64_pilon exonerate:protein2genome:local exon 126946 128736 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 126946 128736 2402 - . alignment_id 0 ; Query GL50803_14669-t26_1-p1 ; Align 128737 1 1791 utg64_pilon exonerate:protein2genome:local gene 125649 125996 601 - . gene_id 0 ; sequence GL50803_14670-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 125649 125996 . - . utg64_pilon exonerate:protein2genome:local exon 125649 125996 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 125649 125996 601 - . alignment_id 0 ; Query GL50803_14670-t26_1-p1 ; Align 125997 1 348 utg47_pilon exonerate:protein2genome:local gene 1087829 1089286 2099 + . gene_id 0 ; sequence GL50803_14675-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1087829 1089286 . + . utg47_pilon exonerate:protein2genome:local exon 1087829 1089286 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1087829 1089286 2099 + . alignment_id 0 ; Query GL50803_14675-t26_1-p1 ; Align 1087829 1 1458 utg47_pilon exonerate:protein2genome:local gene 1079187 1080941 2794 + . gene_id 0 ; sequence GL50803_14677-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1079187 1080941 . + . utg47_pilon exonerate:protein2genome:local exon 1079187 1080941 . + . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1079187 1080941 2794 + . alignment_id 0 ; Query GL50803_14677-t26_1-p1 ; Align 1079187 1 1638 ; Align 1080825 549 39 ; Align 1080864 563 78 utg47_pilon exonerate:protein2genome:local gene 179733 588256 927 - . gene_id 0 ; sequence GL50803_14679-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 588178 588256 . - . utg47_pilon exonerate:protein2genome:local exon 588178 588256 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 588176 588177 . - . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 587618 588177 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 587618 587619 . - . intron_id 0 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local cds 587478 587617 . - . utg47_pilon exonerate:protein2genome:local exon 587478 587617 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 587476 587477 . - . intron_id 2 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 440258 587477 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 440258 440259 . - . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 440024 440257 . - . utg47_pilon exonerate:protein2genome:local exon 440024 440257 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 440022 440023 . - . intron_id 3 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 298751 440023 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 298751 298752 . - . intron_id 2 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 298571 298750 . - . utg47_pilon exonerate:protein2genome:local exon 298571 298750 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 298569 298570 . - . intron_id 4 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 182438 298570 . - . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 182438 182439 . - . intron_id 3 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 182227 182437 . - . utg47_pilon exonerate:protein2genome:local exon 182227 182437 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 182225 182226 . - . intron_id 5 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 180248 182226 . - . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 180248 180249 . - . intron_id 4 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 179987 180247 . - . utg47_pilon exonerate:protein2genome:local exon 179987 180247 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 179985 179986 . - . intron_id 6 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 179813 179986 . - . intron_id 6 utg47_pilon exonerate:protein2genome:local splice3 179813 179814 . - . intron_id 5 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 179733 179812 . - . utg47_pilon exonerate:protein2genome:local exon 179733 179812 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 179733 588256 927 - . alignment_id 0 ; Query GL50803_14679-t26_1-p1 ; Align 588257 80 78 ; Align 587616 107 138 ; Align 440258 153 234 ; Align 298751 231 180 ; Align 182438 291 210 ; Align 180246 362 258 ; Align 179811 449 78 utg349_pilon exonerate:protein2genome:local gene 128301 224176 712 + . gene_id 0 ; sequence GL50803_14680-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 128301 128907 . + . utg349_pilon exonerate:protein2genome:local exon 128301 128907 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 128908 128909 . + . intron_id 1 ; splice_site "CC" utg349_pilon exonerate:protein2genome:local intron 128908 169663 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 169662 169663 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 169664 169823 . + . utg349_pilon exonerate:protein2genome:local exon 169664 169823 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 169824 169825 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 169824 224124 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 224123 224124 . + . intron_id 1 ; splice_site "TG" utg349_pilon exonerate:protein2genome:local cds 224125 224176 . + . utg349_pilon exonerate:protein2genome:local exon 224125 224176 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 128301 224176 712 + . alignment_id 0 ; Query GL50803_14680-t26_1-p1 ; Align 128301 1 606 ; Align 169666 204 156 ; Align 224126 257 51 utg349_pilon exonerate:protein2genome:local gene 126626 128140 2401 + . gene_id 0 ; sequence GL50803_14681-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 126626 128140 . + . utg349_pilon exonerate:protein2genome:local exon 126626 128140 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 126626 128140 2401 + . alignment_id 0 ; Query GL50803_14681-t26_1-p1 ; Align 126626 1 1515 utg308_pilon exonerate:protein2genome:local gene 694485 697109 3945 - . gene_id 0 ; sequence GL50803_14689-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 694485 697109 . - . utg308_pilon exonerate:protein2genome:local exon 694485 697109 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 694485 697109 3945 - . alignment_id 0 ; Query GL50803_14689-t26_1-p1 ; Align 697110 1 2625 utg308_pilon exonerate:protein2genome:local gene 692361 693221 1312 + . gene_id 0 ; sequence GL50803_14690-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 692361 693221 . + . utg308_pilon exonerate:protein2genome:local exon 692361 693221 . + . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 692361 693221 1312 + . alignment_id 0 ; Query GL50803_14690-t26_1-p1 ; Align 692361 1 768 ; Align 693132 257 90 utg64_pilon exonerate:protein2genome:local gene 682842 683720 1164 - . gene_id 0 ; sequence GL50803_14691-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 682842 683720 . - . utg64_pilon exonerate:protein2genome:local exon 682842 683720 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 682842 683720 1164 - . alignment_id 0 ; Query GL50803_14691-t26_1-p1 ; Align 683721 1 879 utg349_pilon exonerate:protein2genome:local gene 1247458 1249494 2624 + . gene_id 0 ; sequence GL50803_14694-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1247458 1249494 . + . utg349_pilon exonerate:protein2genome:local exon 1247458 1249494 . + . insertions 3 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1247458 1249494 2624 + . alignment_id 0 ; Query GL50803_14694-t26_1-p1 ; Align 1247458 1 189 ; Align 1247650 64 624 ; Align 1248274 273 1221 utg349_pilon exonerate:protein2genome:local gene 1246188 1247126 1347 + . gene_id 0 ; sequence GL50803_14696-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1246188 1247126 . + . utg349_pilon exonerate:protein2genome:local exon 1246188 1247126 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1246188 1247126 1347 + . alignment_id 0 ; Query GL50803_14696-t26_1-p1 ; Align 1246188 1 939 utg47_pilon exonerate:protein2genome:local gene 480037 480465 721 - . gene_id 0 ; sequence GL50803_14699-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 480037 480465 . - . utg47_pilon exonerate:protein2genome:local exon 480037 480465 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 480037 480465 721 - . alignment_id 0 ; Query GL50803_14699-t26_1-p1 ; Align 480466 1 429 utg349_pilon exonerate:protein2genome:local gene 958595 959137 342 - . gene_id 0 ; sequence GL50803_1470-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 958811 959137 . - . utg349_pilon exonerate:protein2genome:local exon 958811 959137 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 958809 958810 . - . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 958775 958810 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 958775 958776 . - . intron_id 0 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local cds 958595 958774 . - . utg349_pilon exonerate:protein2genome:local exon 958595 958774 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 958595 959137 342 - . alignment_id 0 ; Query GL50803_1470-t26_1-p1 ; Align 959138 3 327 ; Align 958775 112 180 utg47_pilon exonerate:protein2genome:local gene 467872 473394 8213 - . gene_id 0 ; sequence GL50803_14702-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 467872 473394 . - . utg47_pilon exonerate:protein2genome:local exon 467872 473394 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 467872 473394 8213 - . alignment_id 0 ; Query GL50803_14702-t26_1-p1 ; Align 473395 1 4554 ; Align 468841 1520 969 utg47_pilon exonerate:protein2genome:local gene 1117547 1119727 3281 - . gene_id 0 ; sequence GL50803_14704-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1117547 1119727 . - . utg47_pilon exonerate:protein2genome:local exon 1117547 1119727 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1117547 1119727 3281 - . alignment_id 0 ; Query GL50803_14704-t26_1-p1 ; Align 1119728 1 2181 utg99_pilon exonerate:protein2genome:local gene 65684 68620 4135 + . gene_id 0 ; sequence GL50803_14708-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 65684 68620 . + . utg99_pilon exonerate:protein2genome:local exon 65684 68620 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 65684 68620 4135 + . alignment_id 0 ; Query GL50803_14708-t26_1-p1 ; Align 65684 1 2937 utg731_pilon exonerate:protein2genome:local gene 1198690 1201011 2994 - . gene_id 0 ; sequence GL50803_14712-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1198690 1201011 . - . utg731_pilon exonerate:protein2genome:local exon 1198690 1201011 . - . insertions 3 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1198690 1201011 2994 - . alignment_id 0 ; Query GL50803_14712-t26_1-p1 ; Align 1201012 3 795 ; Align 1200217 269 564 ; Align 1199650 457 870 ; Align 1198780 748 90 utg731_pilon exonerate:protein2genome:local gene 1204341 1205501 1823 - . gene_id 0 ; sequence GL50803_14713-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1204341 1205501 . - . utg731_pilon exonerate:protein2genome:local exon 1204341 1205501 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1204341 1205501 1823 - . alignment_id 0 ; Query GL50803_14713-t26_1-p1 ; Align 1205502 1 1161 utg731_pilon exonerate:protein2genome:local gene 270075 271376 1612 + . gene_id 0 ; sequence GL50803_14722-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 270075 271376 . + . utg731_pilon exonerate:protein2genome:local exon 270075 271376 . + . insertions 0 ; deletions 2 ; frameshifts 3 utg731_pilon exonerate:protein2genome:local similarity 270075 271376 1612 + . alignment_id 0 ; Query GL50803_14722-t26_1-p1 ; Align 270075 1 108 ; Align 270185 37 456 ; Align 270641 191 90 ; Align 270732 221 645 utg349_pilon exonerate:protein2genome:local gene 380766 381806 1064 - . gene_id 0 ; sequence GL50803_14727-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 380766 381806 . - . utg349_pilon exonerate:protein2genome:local exon 380766 381806 . - . insertions 0 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 380766 381806 1064 - . alignment_id 0 ; Query GL50803_14727-t26_1-p1 ; Align 381807 1 564 ; Align 381243 192 21 ; Align 381222 200 456 utg47_pilon exonerate:protein2genome:local gene 123845 124939 1771 - . gene_id 0 ; sequence GL50803_14730-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 123845 124939 . - . utg47_pilon exonerate:protein2genome:local exon 123845 124939 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 123845 124939 1771 - . alignment_id 0 ; Query GL50803_14730-t26_1-p1 ; Align 124940 1 501 ; Align 124436 168 591 utg47_pilon exonerate:protein2genome:local gene 126372 129104 2229 + . gene_id 0 ; sequence GL50803_14731-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 126372 126663 . + . utg47_pilon exonerate:protein2genome:local exon 126372 126663 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 126664 126665 . + . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 126664 126702 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 126701 126702 . + . intron_id 0 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 126703 129104 . + . utg47_pilon exonerate:protein2genome:local exon 126703 129104 . + . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 126372 129104 2229 + . alignment_id 0 ; Query GL50803_14731-t26_1-p1 ; Align 126372 20 291 ; Align 126705 118 1440 ; Align 128145 599 795 ; Align 128940 867 165 utg349_pilon exonerate:protein2genome:local gene 469032 472037 3600 - . gene_id 0 ; sequence GL50803_14737-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 469032 472037 . - . utg349_pilon exonerate:protein2genome:local exon 469032 472037 . - . insertions 0 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 469032 472037 3600 - . alignment_id 0 ; Query GL50803_14737-t26_1-p1 ; Align 472038 1 285 ; Align 471753 99 1386 ; Align 470367 563 645 ; Align 469722 779 690 utg731_pilon exonerate:protein2genome:local gene 860072 862165 2352 - . gene_id 0 ; sequence GL50803_14741-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 860072 862165 . - . utg731_pilon exonerate:protein2genome:local exon 860072 862165 . - . insertions 0 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 860072 862165 2352 - . alignment_id 0 ; Query GL50803_14741-t26_1-p1 ; Align 862166 1 540 ; Align 861626 184 1104 ; Align 860522 553 450 utg731_pilon exonerate:protein2genome:local gene 859191 860051 1370 + . gene_id 0 ; sequence GL50803_14742-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 859191 860051 . + . utg731_pilon exonerate:protein2genome:local exon 859191 860051 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 859191 860051 1370 + . alignment_id 0 ; Query GL50803_14742-t26_1-p1 ; Align 859191 1 861 utg47_pilon exonerate:protein2genome:local gene 1897053 1898897 2509 + . gene_id 0 ; sequence GL50803_14745-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1897053 1898897 . + . utg47_pilon exonerate:protein2genome:local exon 1897053 1898897 . + . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1897053 1898897 2509 + . alignment_id 0 ; Query GL50803_14745-t26_1-p1 ; Align 1897053 1 807 ; Align 1897860 273 1038 utg47_pilon exonerate:protein2genome:local gene 1895932 1896516 705 - . gene_id 0 ; sequence GL50803_14746-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1895932 1896516 . - . utg47_pilon exonerate:protein2genome:local exon 1895932 1896516 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1895932 1896516 705 - . alignment_id 0 ; Query GL50803_14746-t26_1-p1 ; Align 1896517 1 417 ; Align 1896100 141 168 utg349_pilon exonerate:protein2genome:local gene 286282 286761 800 - . gene_id 0 ; sequence GL50803_14748-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 286282 286761 . - . utg349_pilon exonerate:protein2genome:local exon 286282 286761 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 286282 286761 800 - . alignment_id 0 ; Query GL50803_14748-t26_1-p1 ; Align 286762 1 480 utg349_pilon exonerate:protein2genome:local gene 270940 272100 1362 + . gene_id 0 ; sequence GL50803_14752-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 270940 272100 . + . utg349_pilon exonerate:protein2genome:local exon 270940 272100 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 270940 272100 1362 + . alignment_id 0 ; Query GL50803_14752-t26_1-p1 ; Align 270940 1 1161 utg47_pilon exonerate:protein2genome:local gene 614675 615994 2111 + . gene_id 0 ; sequence GL50803_14753-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 614675 615994 . + . utg47_pilon exonerate:protein2genome:local exon 614675 615994 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 614675 615994 2111 + . alignment_id 0 ; Query GL50803_14753-t26_1-p1 ; Align 614675 2 1320 utg11_pilon exonerate:protein2genome:local gene 176909 179992 3668 - . gene_id 0 ; sequence GL50803_14758-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 176909 179992 . - . utg11_pilon exonerate:protein2genome:local exon 176909 179992 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 176909 179992 3668 - . alignment_id 0 ; Query GL50803_14758-t26_1-p1 ; Align 179993 1 2238 ; Align 177755 748 846 utg11_pilon exonerate:protein2genome:local gene 172881 174293 2241 - . gene_id 0 ; sequence GL50803_14759-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 172881 174293 . - . utg11_pilon exonerate:protein2genome:local exon 172881 174293 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 172881 174293 2241 - . alignment_id 0 ; Query GL50803_14759-t26_1-p1 ; Align 174294 1 1413 utg11_pilon exonerate:protein2genome:local gene 1493633 1494849 1039 - . gene_id 0 ; sequence GL50803_14762-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1494265 1494849 . - . utg11_pilon exonerate:protein2genome:local exon 1494265 1494849 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local splice5 1494263 1494264 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1494211 1494264 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1494211 1494212 . - . intron_id 0 ; splice_site "TG" utg11_pilon exonerate:protein2genome:local cds 1493633 1494210 . - . utg11_pilon exonerate:protein2genome:local exon 1493633 1494210 . - . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 1493633 1494849 1039 - . alignment_id 0 ; Query GL50803_14762-t26_1-p1 ; Align 1494850 8 60 ; Align 1494788 28 522 ; Align 1494209 203 123 ; Align 1494086 245 318 ; Align 1493768 354 135 utg11_pilon exonerate:protein2genome:local gene 1501625 1503508 2514 + . gene_id 0 ; sequence GL50803_14763-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1501625 1503508 . + . utg11_pilon exonerate:protein2genome:local exon 1501625 1503508 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1501625 1503508 2514 + . alignment_id 0 ; Query GL50803_14763-t26_1-p1 ; Align 1501625 1 1884 utg11_pilon exonerate:protein2genome:local gene 1506269 1507429 1644 - . gene_id 0 ; sequence GL50803_14764-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1506269 1507429 . - . utg11_pilon exonerate:protein2genome:local exon 1506269 1507429 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1506269 1507429 1644 - . alignment_id 0 ; Query GL50803_14764-t26_1-p1 ; Align 1507430 1 1161 utg11_pilon exonerate:protein2genome:local gene 1507502 1509631 2867 + . gene_id 0 ; sequence GL50803_14765-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1507502 1509631 . + . utg11_pilon exonerate:protein2genome:local exon 1507502 1509631 . + . insertions 3 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1507502 1509631 2867 + . alignment_id 0 ; Query GL50803_14765-t26_1-p1 ; Align 1507502 1 477 ; Align 1507979 162 1404 ; Align 1509386 630 246 utg265_pilon exonerate:protein2genome:local gene 856711 858807 2283 + . gene_id 0 ; sequence GL50803_14768-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 856711 858807 . + . utg265_pilon exonerate:protein2genome:local exon 856711 858807 . + . insertions 3 ; deletions 5 utg265_pilon exonerate:protein2genome:local similarity 856711 858807 2283 + . alignment_id 0 ; Query GL50803_14768-t26_1-p1 ; Align 856711 1 630 ; Align 857341 212 81 ; Align 857425 239 267 ; Align 857692 329 999 ; Align 858691 665 117 utg47_pilon exonerate:protein2genome:local gene 710236 710934 668 - . gene_id 0 ; sequence GL50803_14782-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 710236 710934 . - . utg47_pilon exonerate:protein2genome:local exon 710236 710934 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 710236 710934 668 - . alignment_id 0 ; Query GL50803_14782-t26_1-p1 ; Align 710935 9 699 utg99_pilon exonerate:protein2genome:local gene 182321 390986 1003 - . gene_id 0 ; sequence GL50803_14783-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 390518 390986 . - . utg99_pilon exonerate:protein2genome:local exon 390518 390986 . - . insertions 6 ; deletions 3 utg99_pilon exonerate:protein2genome:local splice5 390516 390517 . - . intron_id 1 ; splice_site "GG" utg99_pilon exonerate:protein2genome:local intron 326391 390517 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 326391 326392 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 326235 326390 . - . utg99_pilon exonerate:protein2genome:local exon 326235 326390 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 326233 326234 . - . intron_id 2 ; splice_site "GG" utg99_pilon exonerate:protein2genome:local intron 182611 326234 . - . intron_id 2 utg99_pilon exonerate:protein2genome:local splice3 182611 182612 . - . intron_id 1 ; splice_site "GG" utg99_pilon exonerate:protein2genome:local cds 182321 182610 . - . utg99_pilon exonerate:protein2genome:local exon 182321 182610 . - . insertions 0 ; deletions 2 utg99_pilon exonerate:protein2genome:local similarity 182321 390986 1003 - . alignment_id 0 ; Query GL50803_14783-t26_1-p1 ; Align 390987 1 84 ; Align 390903 32 123 ; Align 390777 73 201 ; Align 390573 140 54 ; Align 326389 159 153 ; Align 182609 211 105 ; Align 182504 247 48 ; Align 182456 264 135 utg349_pilon exonerate:protein2genome:local gene 1582750 1583712 1470 - . gene_id 0 ; sequence GL50803_14785-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1582750 1583712 . - . utg349_pilon exonerate:protein2genome:local exon 1582750 1583712 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1582750 1583712 1470 - . alignment_id 0 ; Query GL50803_14785-t26_1-p1 ; Align 1583713 171 963 utg349_pilon exonerate:protein2genome:local gene 1578424 1696053 1889 + . gene_id 0 ; sequence GL50803_14786-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1578424 1579980 . + . utg349_pilon exonerate:protein2genome:local exon 1578424 1579980 . + . insertions 6 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1579981 1579982 . + . intron_id 1 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 1579981 1671892 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1671891 1671892 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1671893 1671942 . + . utg349_pilon exonerate:protein2genome:local exon 1671893 1671942 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1671943 1671944 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1671943 1695893 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1695892 1695893 . + . intron_id 1 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local cds 1695894 1696053 . + . utg349_pilon exonerate:protein2genome:local exon 1695894 1696053 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1578424 1696053 1889 + . alignment_id 0 ; Query GL50803_14786-t26_1-p1 ; Align 1578424 227 1512 ; Align 1579942 731 39 ; Align 1671893 744 48 ; Align 1695895 761 69 ; Align 1695964 785 90 utg349_pilon exonerate:protein2genome:local gene 1572147 1574276 3299 - . gene_id 0 ; sequence GL50803_14787-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1572147 1574276 . - . utg349_pilon exonerate:protein2genome:local exon 1572147 1574276 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1572147 1574276 3299 - . alignment_id 0 ; Query GL50803_14787-t26_1-p1 ; Align 1574277 1 1683 ; Align 1572594 563 447 utg47_pilon exonerate:protein2genome:local gene 2143812 2144594 1103 - . gene_id 0 ; sequence GL50803_14790-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2143812 2144594 . - . utg47_pilon exonerate:protein2genome:local exon 2143812 2144594 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2143812 2144594 1103 - . alignment_id 0 ; Query GL50803_14790-t26_1-p1 ; Align 2144595 150 783 utg47_pilon exonerate:protein2genome:local gene 2151093 2152121 1227 - . gene_id 0 ; sequence GL50803_14791-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2151093 2152121 . - . utg47_pilon exonerate:protein2genome:local exon 2151093 2152121 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2151093 2152121 1227 - . alignment_id 0 ; Query GL50803_14791-t26_1-p1 ; Align 2152122 2 1029 utg11_pilon exonerate:protein2genome:local gene 448104 450128 2670 + . gene_id 0 ; sequence GL50803_14796-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 448104 450128 . + . utg11_pilon exonerate:protein2genome:local exon 448104 450128 . + . insertions 3 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 448104 450128 2670 + . alignment_id 0 ; Query GL50803_14796-t26_1-p1 ; Align 448104 129 561 ; Align 448668 316 297 ; Align 448965 420 1164 utg11_pilon exonerate:protein2genome:local gene 447089 447586 737 - . gene_id 0 ; sequence GL50803_14797-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 447089 447586 . - . utg11_pilon exonerate:protein2genome:local exon 447089 447586 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 447089 447586 737 - . alignment_id 0 ; Query GL50803_14797-t26_1-p1 ; Align 447587 1 498 utg47_pilon exonerate:protein2genome:local gene 2113987 2115165 1619 + . gene_id 0 ; sequence GL50803_14800-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2113987 2115165 . + . utg47_pilon exonerate:protein2genome:local exon 2113987 2115165 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2113987 2115165 1619 + . alignment_id 0 ; Query GL50803_14800-t26_1-p1 ; Align 2113987 10 690 ; Align 2114680 240 486 utg47_pilon exonerate:protein2genome:local gene 2119054 2291129 2801 - . gene_id 0 ; sequence GL50803_14802-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2291069 2291129 . - . utg47_pilon exonerate:protein2genome:local exon 2291069 2291129 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 2291067 2291068 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 2183932 2291068 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 2183932 2183933 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2183805 2183931 . - . utg47_pilon exonerate:protein2genome:local exon 2183805 2183931 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 2183803 2183804 . - . intron_id 2 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 2121989 2183804 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 2121989 2121990 . - . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2121174 2121988 . - . utg47_pilon exonerate:protein2genome:local exon 2121174 2121988 . - . insertions 3 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 2121172 2121173 . - . intron_id 3 ; splice_site "TT" utg47_pilon exonerate:protein2genome:local intron 2121117 2121173 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 2121117 2121118 . - . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2119054 2121116 . - . utg47_pilon exonerate:protein2genome:local exon 2119054 2121116 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2119054 2291129 2801 - . alignment_id 0 ; Query GL50803_14802-t26_1-p1 ; Align 2291130 574 60 ; Align 2183930 595 66 ; Align 2183864 618 57 ; Align 2121988 638 84 ; Align 2121901 666 375 ; Align 2121526 793 351 ; Align 2121115 911 69 ; Align 2121046 935 1992 utg47_pilon exonerate:protein2genome:local gene 1600641 1602024 1696 + . gene_id 0 ; sequence GL50803_14807-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1600641 1602024 . + . utg47_pilon exonerate:protein2genome:local exon 1600641 1602024 . + . insertions 0 ; deletions 2 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 1600641 1602024 1696 + . alignment_id 0 ; Query GL50803_14807-t26_1-p1 ; Align 1600641 14 411 ; Align 1601053 152 171 ; Align 1601226 210 177 ; Align 1601404 269 621 utg47_pilon exonerate:protein2genome:local gene 1610371 1610994 609 - . gene_id 0 ; sequence GL50803_14809-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1610371 1610994 . - . utg47_pilon exonerate:protein2genome:local exon 1610371 1610994 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1610371 1610994 609 - . alignment_id 0 ; Query GL50803_14809-t26_1-p1 ; Align 1610995 1 624 utg47_pilon exonerate:protein2genome:local gene 2071165 2073543 3219 + . gene_id 0 ; sequence GL50803_14818-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2071165 2073543 . + . utg47_pilon exonerate:protein2genome:local exon 2071165 2073543 . + . insertions 3 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 2071165 2073543 3219 + . alignment_id 0 ; Query GL50803_14818-t26_1-p1 ; Align 2071165 1 1179 ; Align 2072344 395 243 ; Align 2072587 477 42 ; Align 2072632 491 912 utg47_pilon exonerate:protein2genome:local gene 2076241 2076852 801 - . gene_id 0 ; sequence GL50803_14819-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2076241 2076852 . - . utg47_pilon exonerate:protein2genome:local exon 2076241 2076852 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2076241 2076852 801 - . alignment_id 0 ; Query GL50803_14819-t26_1-p1 ; Align 2076853 1 612 utg47_pilon exonerate:protein2genome:local gene 2085868 2086255 606 - . gene_id 0 ; sequence GL50803_14821-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2085868 2086255 . - . utg47_pilon exonerate:protein2genome:local exon 2085868 2086255 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 2085868 2086255 606 - . alignment_id 0 ; Query GL50803_14821-t26_1-p1 ; Align 2086256 1 201 ; Align 2086054 68 186 utg349_pilon exonerate:protein2genome:local gene 51806 52267 815 - . gene_id 0 ; sequence GL50803_14827-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 51806 52267 . - . utg349_pilon exonerate:protein2genome:local exon 51806 52267 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 51806 52267 815 - . alignment_id 0 ; Query GL50803_14827-t26_1-p1 ; Align 52268 1 462 utg349_pilon exonerate:protein2genome:local gene 50894 51766 1080 + . gene_id 0 ; sequence GL50803_14828-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 50894 51766 . + . utg349_pilon exonerate:protein2genome:local exon 50894 51766 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 50894 51766 1080 + . alignment_id 0 ; Query GL50803_14828-t26_1-p1 ; Align 50894 1 873 utg64_pilon exonerate:protein2genome:local gene 290518 589464 302 + . gene_id 0 ; sequence GL50803_14831-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 290518 290608 . + . utg64_pilon exonerate:protein2genome:local exon 290518 290608 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 290609 290610 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 290609 431493 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 431492 431493 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 431494 431556 . + . utg64_pilon exonerate:protein2genome:local exon 431494 431556 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 431557 431558 . + . intron_id 2 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 431557 589231 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 589230 589231 . + . intron_id 1 ; splice_site "CG" utg64_pilon exonerate:protein2genome:local cds 589232 589464 . + . utg64_pilon exonerate:protein2genome:local exon 589232 589464 . + . insertions 3 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 290518 589464 302 + . alignment_id 0 ; Query GL50803_14831-t26_1-p1 ; Align 290518 1 54 ; Align 290575 19 33 ; Align 431496 31 60 ; Align 589234 52 30 ; Align 589267 62 96 ; Align 589363 95 102 utg731_pilon exonerate:protein2genome:local gene 1489197 1490381 1717 + . gene_id 0 ; sequence GL50803_14833-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1489197 1490381 . + . utg731_pilon exonerate:protein2genome:local exon 1489197 1490381 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1489197 1490381 1717 + . alignment_id 0 ; Query GL50803_14833-t26_1-p1 ; Align 1489197 4 1185 utg731_pilon exonerate:protein2genome:local gene 1490359 1492320 2668 - . gene_id 0 ; sequence GL50803_14834-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1490359 1492320 . - . utg731_pilon exonerate:protein2genome:local exon 1490359 1492320 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1490359 1492320 2668 - . alignment_id 0 ; Query GL50803_14834-t26_1-p1 ; Align 1492321 1 1962 utg731_pilon exonerate:protein2genome:local gene 1483856 1486993 4511 - . gene_id 0 ; sequence GL50803_14835-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1483856 1486993 . - . utg731_pilon exonerate:protein2genome:local exon 1483856 1486993 . - . insertions 3 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 1483856 1486993 4511 - . alignment_id 0 ; Query GL50803_14835-t26_1-p1 ; Align 1486994 1 1476 ; Align 1485515 493 285 ; Align 1485230 591 1329 ; Align 1483901 1035 45 utg731_pilon exonerate:protein2genome:local gene 1470947 1473490 3106 - . gene_id 0 ; sequence GL50803_14838-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1470947 1473490 . - . utg731_pilon exonerate:protein2genome:local exon 1470947 1473490 . - . insertions 9 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1470947 1473490 3106 - . alignment_id 0 ; Query GL50803_14838-t26_1-p1 ; Align 1473491 1 756 ; Align 1472732 253 330 ; Align 1472399 363 102 ; Align 1472294 397 420 ; Align 1471874 538 927 utg47_pilon exonerate:protein2genome:local gene 582238 582927 1040 - . gene_id 0 ; sequence GL50803_14841-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 582238 582927 . - . utg47_pilon exonerate:protein2genome:local exon 582238 582927 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 582238 582927 1040 - . alignment_id 0 ; Query GL50803_14841-t26_1-p1 ; Align 582928 1 690 utg47_pilon exonerate:protein2genome:local gene 580061 581017 1433 - . gene_id 0 ; sequence GL50803_14842-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 580061 581017 . - . utg47_pilon exonerate:protein2genome:local exon 580061 581017 . - . insertions 9 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 580061 581017 1433 - . alignment_id 0 ; Query GL50803_14842-t26_1-p1 ; Align 581018 1 747 ; Align 580262 250 201 utg47_pilon exonerate:protein2genome:local gene 578269 579969 2638 - . gene_id 0 ; sequence GL50803_14843-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 578269 579969 . - . utg47_pilon exonerate:protein2genome:local exon 578269 579969 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 578269 579969 2638 - . alignment_id 0 ; Query GL50803_14843-t26_1-p1 ; Align 579970 1 1617 ; Align 578353 543 84 utg47_pilon exonerate:protein2genome:local gene 537821 538678 1229 - . gene_id 0 ; sequence GL50803_14845-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 537821 538678 . - . utg47_pilon exonerate:protein2genome:local exon 537821 538678 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 537821 538678 1229 - . alignment_id 0 ; Query GL50803_14845-t26_1-p1 ; Align 538679 1 858 utg47_pilon exonerate:protein2genome:local gene 540039 543160 3536 - . gene_id 0 ; sequence GL50803_14846-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 540039 543160 . - . utg47_pilon exonerate:protein2genome:local exon 540039 543160 . - . insertions 9 ; deletions 6 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 540039 543160 3536 - . alignment_id 0 ; Query GL50803_14846-t26_1-p1 ; Align 543161 1 1440 ; Align 541721 482 732 ; Align 540989 729 537 ; Align 540443 908 174 ; Align 540267 967 210 ; Align 540057 1038 18 utg349_pilon exonerate:protein2genome:local gene 1664959 1665753 898 - . gene_id 0 ; sequence GL50803_14850-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1664959 1665753 . - . utg349_pilon exonerate:protein2genome:local exon 1664959 1665753 . - . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 1664959 1665753 898 - . alignment_id 0 ; Query GL50803_14850-t26_1-p1 ; Align 1665754 1 501 ; Align 1665253 170 294 utg47_pilon exonerate:protein2genome:local gene 1463887 1470381 8693 + . gene_id 0 ; sequence GL50803_14855-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1463887 1464612 . + . utg47_pilon exonerate:protein2genome:local exon 1463887 1464612 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1464613 1464614 . + . intron_id 1 ; splice_site "CC" utg47_pilon exonerate:protein2genome:local intron 1464613 1464645 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1464644 1464645 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1464646 1470381 . + . utg47_pilon exonerate:protein2genome:local exon 1464646 1470381 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1463887 1470381 8693 + . alignment_id 0 ; Query GL50803_14855-t26_1-p1 ; Align 1463887 1 726 ; Align 1464646 243 363 ; Align 1465009 365 5373 utg47_pilon exonerate:protein2genome:local gene 1462093 1463808 2375 + . gene_id 0 ; sequence GL50803_14856-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1462093 1463808 . + . utg47_pilon exonerate:protein2genome:local exon 1462093 1463808 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1462093 1463808 2375 + . alignment_id 0 ; Query GL50803_14856-t26_1-p1 ; Align 1462093 1 603 ; Align 1462699 202 1110 utg47_pilon exonerate:protein2genome:local gene 1457710 1458714 1345 + . gene_id 0 ; sequence GL50803_14857-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1457710 1458714 . + . utg47_pilon exonerate:protein2genome:local exon 1457710 1458714 . + . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 1457710 1458714 1345 + . alignment_id 0 ; Query GL50803_14857-t26_1-p1 ; Align 1457710 1 882 ; Align 1458592 299 12 ; Align 1458604 304 111 utg47_pilon exonerate:protein2genome:local gene 1454713 1457046 2653 - . gene_id 0 ; sequence GL50803_14858-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1454713 1457046 . - . utg47_pilon exonerate:protein2genome:local exon 1454713 1457046 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1454713 1457046 2653 - . alignment_id 0 ; Query GL50803_14858-t26_1-p1 ; Align 1457047 1 228 ; Align 1456819 80 2106 utg47_pilon exonerate:protein2genome:local gene 1451849 1454623 4509 + . gene_id 0 ; sequence GL50803_14859-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1451849 1454623 . + . utg47_pilon exonerate:protein2genome:local exon 1451849 1454623 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1451849 1454623 4509 + . alignment_id 0 ; Query GL50803_14859-t26_1-p1 ; Align 1451849 1 2775 utg349_pilon exonerate:protein2genome:local gene 1090182 1091477 1870 + . gene_id 0 ; sequence GL50803_14861-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1090182 1091477 . + . utg349_pilon exonerate:protein2genome:local exon 1090182 1091477 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1090182 1091477 1870 + . alignment_id 0 ; Query GL50803_14861-t26_1-p1 ; Align 1090182 3 1296 utg349_pilon exonerate:protein2genome:local gene 1082619 1084523 2264 - . gene_id 0 ; sequence GL50803_14863-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1082619 1084523 . - . utg349_pilon exonerate:protein2genome:local exon 1082619 1084523 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1082619 1084523 2264 - . alignment_id 0 ; Query GL50803_14863-t26_1-p1 ; Align 1084524 1 1905 utg349_pilon exonerate:protein2genome:local gene 1080181 1082532 3247 - . gene_id 0 ; sequence GL50803_14864-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1080181 1082532 . - . utg349_pilon exonerate:protein2genome:local exon 1080181 1082532 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 1080181 1082532 3247 - . alignment_id 0 ; Query GL50803_14864-t26_1-p1 ; Align 1082533 1 675 ; Align 1081858 229 1677 utg265_pilon exonerate:protein2genome:local gene 1018790 1020301 2381 - . gene_id 0 ; sequence GL50803_14868-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1018790 1020301 . - . utg265_pilon exonerate:protein2genome:local exon 1018790 1020301 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1018790 1020301 2381 - . alignment_id 0 ; Query GL50803_14868-t26_1-p1 ; Align 1020302 1 1512 utg265_pilon exonerate:protein2genome:local gene 1020408 1020974 981 - . gene_id 0 ; sequence GL50803_14869-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1020408 1020974 . - . utg265_pilon exonerate:protein2genome:local exon 1020408 1020974 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1020408 1020974 981 - . alignment_id 0 ; Query GL50803_14869-t26_1-p1 ; Align 1020975 1 567 utg265_pilon exonerate:protein2genome:local gene 1037529 1071312 4318 - . gene_id 0 ; sequence GL50803_14872-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 1070593 1071312 . - . utg265_pilon exonerate:protein2genome:local exon 1070593 1071312 . - . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local splice5 1070591 1070592 . - . intron_id 1 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local intron 1040532 1070592 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 1040532 1040533 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 1037529 1040531 . - . utg265_pilon exonerate:protein2genome:local exon 1037529 1040531 . - . insertions 6 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 1037529 1071312 4318 - . alignment_id 0 ; Query GL50803_14872-t26_1-p1 ; Align 1071313 5 435 ; Align 1070878 152 15 ; Align 1070863 159 270 ; Align 1040532 249 783 ; Align 1039743 510 231 ; Align 1039512 589 114 ; Align 1039398 629 1869 utg265_pilon exonerate:protein2genome:local gene 1050035 1050601 924 + . gene_id 0 ; sequence GL50803_14874-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1050035 1050601 . + . utg265_pilon exonerate:protein2genome:local exon 1050035 1050601 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1050035 1050601 924 + . alignment_id 0 ; Query GL50803_14874-t26_1-p1 ; Align 1050035 1 567 utg349_pilon exonerate:protein2genome:local gene 108864 109892 1314 - . gene_id 0 ; sequence GL50803_14877-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 108864 109892 . - . utg349_pilon exonerate:protein2genome:local exon 108864 109892 . - . insertions 0 ; deletions 2 ; frameshifts 3 utg349_pilon exonerate:protein2genome:local similarity 108864 109892 1314 - . alignment_id 0 ; Query GL50803_14877-t26_1-p1 ; Align 109893 1 597 ; Align 109295 200 126 ; Align 109167 243 204 ; Align 108963 312 99 utg265_pilon exonerate:protein2genome:local gene 137621 138352 336 + . gene_id 0 ; sequence GL50803_14891-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 137621 137824 . + . utg265_pilon exonerate:protein2genome:local exon 137621 137824 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 137825 137826 . + . intron_id 1 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 137825 137860 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 137859 137860 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 137861 138352 . + . utg265_pilon exonerate:protein2genome:local exon 137861 138352 . + . insertions 0 ; deletions 5 utg265_pilon exonerate:protein2genome:local similarity 137621 138352 336 + . alignment_id 0 ; Query GL50803_14891-t26_1-p1 ; Align 137621 2 204 ; Align 137861 70 156 ; Align 138017 126 117 ; Align 138134 166 219 utg265_pilon exonerate:protein2genome:local gene 1063766 1065709 2656 - . gene_id 0 ; sequence GL50803_14895-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1063766 1065709 . - . utg265_pilon exonerate:protein2genome:local exon 1063766 1065709 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1063766 1065709 2656 - . alignment_id 0 ; Query GL50803_14895-t26_1-p1 ; Align 1065710 1 1944 utg265_pilon exonerate:protein2genome:local gene 1071747 1074713 4243 + . gene_id 0 ; sequence GL50803_14897-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1071747 1074713 . + . utg265_pilon exonerate:protein2genome:local exon 1071747 1074713 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1071747 1074713 4243 + . alignment_id 0 ; Query GL50803_14897-t26_1-p1 ; Align 1071747 1 2967 utg265_pilon exonerate:protein2genome:local gene 410923 413831 3544 - . gene_id 0 ; sequence GL50803_14901-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 410923 413831 . - . utg265_pilon exonerate:protein2genome:local exon 410923 413831 . - . insertions 3 ; deletions 1 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 410923 413831 3544 - . alignment_id 0 ; Query GL50803_14901-t26_1-p1 ; Align 413832 1 1140 ; Align 412691 381 1101 ; Align 411589 749 177 ; Align 411409 808 486 utg265_pilon exonerate:protein2genome:local gene 401861 733669 1940 + . gene_id 0 ; sequence GL50803_14903-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 401861 403331 . + . utg265_pilon exonerate:protein2genome:local exon 401861 403331 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 403332 403333 . + . intron_id 1 ; splice_site "AT" utg265_pilon exonerate:protein2genome:local intron 403332 549498 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 549497 549498 . + . intron_id 0 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local cds 549499 549609 . + . utg265_pilon exonerate:protein2genome:local exon 549499 549609 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 549610 549611 . + . intron_id 2 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 549610 733643 . + . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 733642 733643 . + . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 733644 733669 . + . utg265_pilon exonerate:protein2genome:local exon 733644 733669 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 401861 733669 1940 + . alignment_id 0 ; Query GL50803_14903-t26_1-p1 ; Align 401861 1 1470 ; Align 549501 492 108 ; Align 733646 529 24 utg265_pilon exonerate:protein2genome:local gene 391570 392388 1296 - . gene_id 0 ; sequence GL50803_14905-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 391570 392388 . - . utg265_pilon exonerate:protein2genome:local exon 391570 392388 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 391570 392388 1296 - . alignment_id 0 ; Query GL50803_14905-t26_1-p1 ; Align 392389 1 819 utg265_pilon exonerate:protein2genome:local gene 389727 391142 1898 - . gene_id 0 ; sequence GL50803_14906-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 389727 391142 . - . utg265_pilon exonerate:protein2genome:local exon 389727 391142 . - . insertions 0 ; deletions 6 utg265_pilon exonerate:protein2genome:local similarity 389727 391142 1898 - . alignment_id 0 ; Query GL50803_14906-t26_1-p1 ; Align 391143 1 582 ; Align 390561 198 222 ; Align 390339 275 612 utg11_pilon exonerate:protein2genome:local gene 1593548 1594132 816 + . gene_id 0 ; sequence GL50803_14915-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1593548 1594132 . + . utg11_pilon exonerate:protein2genome:local exon 1593548 1594132 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1593548 1594132 816 + . alignment_id 0 ; Query GL50803_14915-t26_1-p1 ; Align 1593548 1 585 utg11_pilon exonerate:protein2genome:local gene 1587345 1589672 3024 - . gene_id 0 ; sequence GL50803_14916-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1587345 1589672 . - . utg11_pilon exonerate:protein2genome:local exon 1587345 1589672 . - . insertions 9 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 1587345 1589672 3024 - . alignment_id 0 ; Query GL50803_14916-t26_1-p1 ; Align 1589673 1 939 ; Align 1588734 317 846 ; Align 1587879 599 534 utg731_pilon exonerate:protein2genome:local gene 371084 371332 340 - . gene_id 0 ; sequence GL50803_14917-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 371084 371332 . - . utg731_pilon exonerate:protein2genome:local exon 371084 371332 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 371084 371332 340 - . alignment_id 0 ; Query GL50803_14917-t26_1-p1 ; Align 371333 114 249 utg47_pilon exonerate:protein2genome:local gene 1650912 1652402 2346 + . gene_id 0 ; sequence GL50803_14921-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1650912 1652402 . + . utg47_pilon exonerate:protein2genome:local exon 1650912 1652402 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1650912 1652402 2346 + . alignment_id 0 ; Query GL50803_14921-t26_1-p1 ; Align 1650912 1 234 ; Align 1651146 80 1257 utg47_pilon exonerate:protein2genome:local gene 1655660 1657105 1816 + . gene_id 0 ; sequence GL50803_14922-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1655660 1657105 . + . utg47_pilon exonerate:protein2genome:local exon 1655660 1657105 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1655660 1657105 1816 + . alignment_id 0 ; Query GL50803_14922-t26_1-p1 ; Align 1655660 1 993 ; Align 1656656 332 450 utg16500_pilon exonerate:protein2genome:local gene 49120 49518 341 - . gene_id 0 ; sequence GL50803_14926-t26_1-p1 ; gene_orientation . utg16500_pilon exonerate:protein2genome:local cds 49120 49518 . - . utg16500_pilon exonerate:protein2genome:local exon 49120 49518 . - . insertions 0 ; deletions 0 utg16500_pilon exonerate:protein2genome:local similarity 49120 49518 341 - . alignment_id 0 ; Query GL50803_14926-t26_1-p1 ; Align 49519 72 399 utg11_pilon exonerate:protein2genome:local gene 812887 813252 319 + . gene_id 0 ; sequence GL50803_14932-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 812887 813252 . + . utg11_pilon exonerate:protein2genome:local exon 812887 813252 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 812887 813252 319 + . alignment_id 0 ; Query GL50803_14932-t26_1-p1 ; Align 812887 1 366 utg11_pilon exonerate:protein2genome:local gene 805192 807300 2796 + . gene_id 0 ; sequence GL50803_14933-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 805192 807300 . + . utg11_pilon exonerate:protein2genome:local exon 805192 807300 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 805192 807300 2796 + . alignment_id 0 ; Query GL50803_14933-t26_1-p1 ; Align 805192 1 1074 ; Align 806266 361 1035 utg11_pilon exonerate:protein2genome:local gene 793885 798397 6210 + . gene_id 0 ; sequence GL50803_14934-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 793885 798397 . + . utg11_pilon exonerate:protein2genome:local exon 793885 798397 . + . insertions 0 ; deletions 4 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 793885 798397 6210 + . alignment_id 0 ; Query GL50803_14934-t26_1-p1 ; Align 793885 3 1809 ; Align 795695 606 102 ; Align 795797 643 987 ; Align 796784 973 1614 utg349_pilon exonerate:protein2genome:local gene 1415242 1416180 1390 - . gene_id 0 ; sequence GL50803_14937-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1415242 1416180 . - . utg349_pilon exonerate:protein2genome:local exon 1415242 1416180 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1415242 1416180 1390 - . alignment_id 0 ; Query GL50803_14937-t26_1-p1 ; Align 1416181 1 939 utg349_pilon exonerate:protein2genome:local gene 1416302 1416847 890 + . gene_id 0 ; sequence GL50803_14938-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1416302 1416847 . + . utg349_pilon exonerate:protein2genome:local exon 1416302 1416847 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1416302 1416847 890 + . alignment_id 0 ; Query GL50803_14938-t26_1-p1 ; Align 1416302 1 546 utg349_pilon exonerate:protein2genome:local gene 1419585 1420526 1142 - . gene_id 0 ; sequence GL50803_14939-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1419585 1420526 . - . utg349_pilon exonerate:protein2genome:local exon 1419585 1420526 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1419585 1420526 1142 - . alignment_id 0 ; Query GL50803_14939-t26_1-p1 ; Align 1420527 1 942 utg349_pilon exonerate:protein2genome:local gene 1423408 1424976 2192 - . gene_id 0 ; sequence GL50803_14940-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1423408 1424976 . - . utg349_pilon exonerate:protein2genome:local exon 1423408 1424976 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1423408 1424976 2192 - . alignment_id 0 ; Query GL50803_14940-t26_1-p1 ; Align 1424977 1 1569 utg308_pilon exonerate:protein2genome:local gene 215748 216434 1137 - . gene_id 0 ; sequence GL50803_14947-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 215748 216434 . - . utg308_pilon exonerate:protein2genome:local exon 215748 216434 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 215748 216434 1137 - . alignment_id 0 ; Query GL50803_14947-t26_1-p1 ; Align 216435 1 687 utg308_pilon exonerate:protein2genome:local gene 225976 228258 2742 + . gene_id 0 ; sequence GL50803_14948-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 225976 228258 . + . utg308_pilon exonerate:protein2genome:local exon 225976 228258 . + . insertions 3 ; deletions 6 utg308_pilon exonerate:protein2genome:local similarity 225976 228258 2742 + . alignment_id 0 ; Query GL50803_14948-t26_1-p1 ; Align 225976 1 246 ; Align 226222 84 144 ; Align 226366 134 933 ; Align 227299 446 66 ; Align 227368 468 516 ; Align 227884 641 12 ; Align 227896 646 363 utg308_pilon exonerate:protein2genome:local gene 228341 230709 2524 - . gene_id 0 ; sequence GL50803_14949-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 228341 230709 . - . utg308_pilon exonerate:protein2genome:local exon 228341 230709 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 228341 230709 2524 - . alignment_id 0 ; Query GL50803_14949-t26_1-p1 ; Align 230710 1 1446 ; Align 229263 483 627 ; Align 228635 692 294 utg308_pilon exonerate:protein2genome:local gene 230723 234004 4770 + . gene_id 0 ; sequence GL50803_14950-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 230723 234004 . + . utg308_pilon exonerate:protein2genome:local exon 230723 234004 . + . insertions 0 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 230723 234004 4770 + . alignment_id 0 ; Query GL50803_14950-t26_1-p1 ; Align 230723 1 927 ; Align 231650 313 2355 utg64_pilon exonerate:protein2genome:local gene 641755 642304 761 + . gene_id 0 ; sequence GL50803_14960-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 641755 642304 . + . utg64_pilon exonerate:protein2genome:local exon 641755 642304 . + . insertions 0 ; deletions 0 ; frameshifts 4 utg64_pilon exonerate:protein2genome:local similarity 641755 642304 761 + . alignment_id 0 ; Query GL50803_14960-t26_1-p1 ; Align 641755 1 96 ; Align 641855 33 450 utg64_pilon exonerate:protein2genome:local gene 638102 639691 2415 - . gene_id 0 ; sequence GL50803_14961-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 638102 639691 . - . utg64_pilon exonerate:protein2genome:local exon 638102 639691 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 638102 639691 2415 - . alignment_id 0 ; Query GL50803_14961-t26_1-p1 ; Align 639692 1 1590 utg11_pilon exonerate:protein2genome:local gene 788026 790630 3647 - . gene_id 0 ; sequence GL50803_14963-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 788026 790630 . - . utg11_pilon exonerate:protein2genome:local exon 788026 790630 . - . insertions 9 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 788026 790630 3647 - . alignment_id 0 ; Query GL50803_14963-t26_1-p1 ; Align 790631 1 480 ; Align 790148 161 1551 ; Align 788596 678 288 ; Align 788302 774 276 utg349_pilon exonerate:protein2genome:local gene 1597231 1598646 1594 - . gene_id 0 ; sequence GL50803_14966-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1597231 1598646 . - . utg349_pilon exonerate:protein2genome:local exon 1597231 1598646 . - . insertions 9 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1597231 1598646 1594 - . alignment_id 0 ; Query GL50803_14966-t26_1-p1 ; Align 1598647 1 459 ; Align 1598185 154 576 ; Align 1597603 346 372 utg349_pilon exonerate:protein2genome:local gene 1601832 1602533 1080 - . gene_id 0 ; sequence GL50803_14967-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1601832 1602533 . - . utg349_pilon exonerate:protein2genome:local exon 1601832 1602533 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1601832 1602533 1080 - . alignment_id 0 ; Query GL50803_14967-t26_1-p1 ; Align 1602534 1 378 ; Align 1602153 127 321 utg349_pilon exonerate:protein2genome:local gene 1616510 1616818 389 - . gene_id 0 ; sequence GL50803_14970-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1616510 1616818 . - . utg349_pilon exonerate:protein2genome:local exon 1616510 1616818 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1616510 1616818 389 - . alignment_id 0 ; Query GL50803_14970-t26_1-p1 ; Align 1616819 14 309 utg349_pilon exonerate:protein2genome:local gene 1616807 1618858 2842 + . gene_id 0 ; sequence GL50803_14971-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1616807 1618858 . + . utg349_pilon exonerate:protein2genome:local exon 1616807 1618858 . + . insertions 3 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 1616807 1618858 2842 + . alignment_id 0 ; Query GL50803_14971-t26_1-p1 ; Align 1616807 10 552 ; Align 1617359 195 123 ; Align 1617485 236 1119 ; Align 1618604 612 255 utg349_pilon exonerate:protein2genome:local gene 1620849 1623506 3042 - . gene_id 0 ; sequence GL50803_14972-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1622771 1623506 . - . utg349_pilon exonerate:protein2genome:local exon 1622771 1623506 . - . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local splice5 1622769 1622770 . - . intron_id 1 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local intron 1622720 1622770 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1622720 1622721 . - . intron_id 0 ; splice_site "TG" utg349_pilon exonerate:protein2genome:local cds 1620849 1622719 . - . utg349_pilon exonerate:protein2genome:local exon 1620849 1622719 . - . insertions 0 ; deletions 7 utg349_pilon exonerate:protein2genome:local similarity 1620849 1623506 3042 - . alignment_id 0 ; Query GL50803_14972-t26_1-p1 ; Align 1623507 1 543 ; Align 1622964 184 192 ; Align 1622718 249 1569 ; Align 1621149 775 138 ; Align 1621011 825 162 utg11_pilon exonerate:protein2genome:local gene 1054517 1055686 1408 - . gene_id 0 ; sequence GL50803_14975-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1054517 1055686 . - . utg11_pilon exonerate:protein2genome:local exon 1054517 1055686 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1054517 1055686 1408 - . alignment_id 0 ; Query GL50803_14975-t26_1-p1 ; Align 1055687 1 39 ; Align 1055648 15 1131 utg11_pilon exonerate:protein2genome:local gene 1430463 1431962 1857 + . gene_id 0 ; sequence GL50803_14978-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1430463 1431962 . + . utg11_pilon exonerate:protein2genome:local exon 1430463 1431962 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1430463 1431962 1857 + . alignment_id 0 ; Query GL50803_14978-t26_1-p1 ; Align 1430463 1 1500 utg11_pilon exonerate:protein2genome:local gene 211975 213699 2754 - . gene_id 0 ; sequence GL50803_14983-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 211975 213699 . - . utg11_pilon exonerate:protein2genome:local exon 211975 213699 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 211975 213699 2754 - . alignment_id 0 ; Query GL50803_14983-t26_1-p1 ; Align 213700 1 1725 utg11_pilon exonerate:protein2genome:local gene 210303 211205 1001 - . gene_id 0 ; sequence GL50803_14984-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 210303 211205 . - . utg11_pilon exonerate:protein2genome:local exon 210303 211205 . - . insertions 3 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 210303 211205 1001 - . alignment_id 0 ; Query GL50803_14984-t26_1-p1 ; Align 211206 1 501 ; Align 210705 173 198 ; Align 210504 239 201 utg11_pilon exonerate:protein2genome:local gene 209872 210258 511 - . gene_id 0 ; sequence GL50803_14986-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 209872 210258 . - . utg11_pilon exonerate:protein2genome:local exon 209872 210258 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 209872 210258 511 - . alignment_id 0 ; Query GL50803_14986-t26_1-p1 ; Align 210259 1 387 utg11_pilon exonerate:protein2genome:local gene 198169 199905 2210 + . gene_id 0 ; sequence GL50803_14987-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 198169 199905 . + . utg11_pilon exonerate:protein2genome:local exon 198169 199905 . + . insertions 3 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 198169 199905 2210 + . alignment_id 0 ; Query GL50803_14987-t26_1-p1 ; Align 198169 1 1257 ; Align 199426 422 165 ; Align 199591 478 201 ; Align 199795 545 111 utg11_pilon exonerate:protein2genome:local gene 53451 198137 1879 + . gene_id 0 ; sequence GL50803_14988-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 53451 53668 . + . utg11_pilon exonerate:protein2genome:local exon 53451 53668 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 53669 53670 . + . intron_id 1 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 53669 196288 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 196287 196288 . + . intron_id 0 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local cds 196289 196811 . + . utg11_pilon exonerate:protein2genome:local exon 196289 196811 . + . insertions 15 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 196812 196813 . + . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 196812 196853 . + . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 196852 196853 . + . intron_id 1 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local cds 196854 198137 . + . utg11_pilon exonerate:protein2genome:local exon 196854 198137 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 53451 198137 1879 + . alignment_id 0 ; Query GL50803_14988-t26_1-p1 ; Align 53451 302 216 ; Align 196290 375 249 ; Align 196548 458 228 ; Align 196782 534 30 ; Align 196854 544 624 ; Align 197478 754 660 utg11_pilon exonerate:protein2genome:local gene 194147 194521 508 - . gene_id 0 ; sequence GL50803_14989-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 194147 194521 . - . utg11_pilon exonerate:protein2genome:local exon 194147 194521 . - . insertions 3 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 194147 194521 508 - . alignment_id 0 ; Query GL50803_14989-t26_1-p1 ; Align 194522 1 195 ; Align 194327 67 24 ; Align 194303 76 69 ; Align 194231 99 84 utg265_pilon exonerate:protein2genome:local gene 291739 291879 188 - . gene_id 0 ; sequence GL50803_1499-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 291739 291879 . - . utg265_pilon exonerate:protein2genome:local exon 291739 291879 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 291739 291879 188 - . alignment_id 0 ; Query GL50803_1499-t26_1-p1 ; Align 291880 1 141 utg1966_pilon exonerate:protein2genome:local gene 83429 83569 188 + . gene_id 0 ; sequence GL50803_1499-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 83429 83569 . + . utg1966_pilon exonerate:protein2genome:local exon 83429 83569 . + . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 83429 83569 188 + . alignment_id 0 ; Query GL50803_1499-t26_1-p1 ; Align 83429 1 141 utg1966_pilon exonerate:protein2genome:local gene 144221 144361 188 - . gene_id 0 ; sequence GL50803_1499-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 144221 144361 . - . utg1966_pilon exonerate:protein2genome:local exon 144221 144361 . - . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 144221 144361 188 - . alignment_id 0 ; Query GL50803_1499-t26_1-p1 ; Align 144362 1 141 utg212_pilon exonerate:protein2genome:local gene 223950 225581 2762 + . gene_id 0 ; sequence GL50803_14993-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 223950 225581 . + . utg212_pilon exonerate:protein2genome:local exon 223950 225581 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 223950 225581 2762 + . alignment_id 0 ; Query GL50803_14993-t26_1-p1 ; Align 223950 1 1632 utg212_pilon exonerate:protein2genome:local gene 226116 235320 10802 + . gene_id 0 ; sequence GL50803_14994-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 226116 235320 . + . utg212_pilon exonerate:protein2genome:local exon 226116 235320 . + . insertions 3 ; deletions 14 ; frameshifts 25 utg212_pilon exonerate:protein2genome:local similarity 226116 235320 10802 + . alignment_id 0 ; Query GL50803_14994-t26_1-p1 ; Align 226116 27 96 ; Align 226213 60 2049 ; Align 228263 743 603 ; Align 228868 945 483 ; Align 229353 1107 588 ; Align 229941 1304 9 ; Align 229952 1307 405 ; Align 230359 1443 159 ; Align 230520 1497 84 ; Align 230605 1525 354 ; Align 230961 1643 6 ; Align 230967 1646 78 ; Align 231047 1673 1056 ; Align 232105 2026 402 ; Align 232510 2160 1293 ; Align 233805 2592 327 ; Align 234133 2702 120 ; Align 234253 2743 3 ; Align 234257 2744 162 ; Align 234419 2799 48 ; Align 234469 2815 138 ; Align 234607 2862 714 utg47_pilon exonerate:protein2genome:local gene 308003 310412 2055 - . gene_id 0 ; sequence GL50803_14997-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 308003 310412 . - . utg47_pilon exonerate:protein2genome:local exon 308003 310412 . - . insertions 15 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 308003 310412 2055 - . alignment_id 0 ; Query GL50803_14997-t26_1-p1 ; Align 310413 23 102 ; Align 310310 57 522 ; Align 309785 231 147 ; Align 309629 280 1098 ; Align 308531 647 399 ; Align 308129 780 126 utg349_pilon exonerate:protein2genome:local gene 607329 608777 1969 - . gene_id 0 ; sequence GL50803_14998-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 607329 608777 . - . utg349_pilon exonerate:protein2genome:local exon 607329 608777 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 607329 608777 1969 - . alignment_id 0 ; Query GL50803_14998-t26_1-p1 ; Align 608778 1 1449 utg349_pilon exonerate:protein2genome:local gene 605918 607357 1908 + . gene_id 0 ; sequence GL50803_14999-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 605918 606123 . + . utg349_pilon exonerate:protein2genome:local exon 605918 606123 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 606124 606125 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 606124 606174 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 606173 606174 . + . intron_id 0 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 606175 607357 . + . utg349_pilon exonerate:protein2genome:local exon 606175 607357 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 605918 607357 1908 + . alignment_id 0 ; Query GL50803_14999-t26_1-p1 ; Align 605918 3 39 ; Align 605960 16 162 ; Align 606176 71 1182 utg349_pilon exonerate:protein2genome:local gene 610945 611640 1058 + . gene_id 0 ; sequence GL50803_15000-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 610945 611640 . + . utg349_pilon exonerate:protein2genome:local exon 610945 611640 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 610945 611640 1058 + . alignment_id 0 ; Query GL50803_15000-t26_1-p1 ; Align 610945 1 696 utg47_pilon exonerate:protein2genome:local gene 366059 366551 700 - . gene_id 0 ; sequence GL50803_15004-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 366059 366551 . - . utg47_pilon exonerate:protein2genome:local exon 366059 366551 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 366059 366551 700 - . alignment_id 0 ; Query GL50803_15004-t26_1-p1 ; Align 366552 1 36 ; Align 366515 13 456 utg349_pilon exonerate:protein2genome:local gene 938293 938643 437 - . gene_id 0 ; sequence GL50803_15007-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 938293 938643 . - . utg349_pilon exonerate:protein2genome:local exon 938293 938643 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 938293 938643 437 - . alignment_id 0 ; Query GL50803_15007-t26_1-p1 ; Align 938644 4 351 utg11_pilon exonerate:protein2genome:local gene 480403 482106 2346 + . gene_id 0 ; sequence GL50803_15008-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 480403 482106 . + . utg11_pilon exonerate:protein2genome:local exon 480403 482106 . + . insertions 6 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 480403 482106 2346 + . alignment_id 0 ; Query GL50803_15008-t26_1-p1 ; Align 480403 1 309 ; Align 480712 108 267 ; Align 480985 197 1122 utg47_pilon exonerate:protein2genome:local gene 918793 920157 1670 + . gene_id 0 ; sequence GL50803_15009-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 918793 920157 . + . utg47_pilon exonerate:protein2genome:local exon 918793 920157 . + . insertions 3 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 918793 920157 1670 + . alignment_id 0 ; Query GL50803_15009-t26_1-p1 ; Align 918793 1 861 ; Align 919654 289 297 ; Align 919954 388 204 utg265_pilon exonerate:protein2genome:local gene 899479 900195 1112 - . gene_id 0 ; sequence GL50803_15011-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 899479 900195 . - . utg265_pilon exonerate:protein2genome:local exon 899479 900195 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 899479 900195 1112 - . alignment_id 0 ; Query GL50803_15011-t26_1-p1 ; Align 900196 1 717 utg265_pilon exonerate:protein2genome:local gene 890025 891719 1872 - . gene_id 0 ; sequence GL50803_15013-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 890025 891719 . - . utg265_pilon exonerate:protein2genome:local exon 890025 891719 . - . insertions 3 ; deletions 7 utg265_pilon exonerate:protein2genome:local similarity 890025 891719 1872 - . alignment_id 0 ; Query GL50803_15013-t26_1-p1 ; Align 891720 1 102 ; Align 891615 35 441 ; Align 891174 184 171 ; Align 891003 242 411 ; Align 890592 381 54 ; Align 890538 400 327 ; Align 890211 510 186 utg18_pilon exonerate:protein2genome:local gene 110427 113921 4166 - . gene_id 0 ; sequence GL50803_15016-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 110427 113921 . - . utg18_pilon exonerate:protein2genome:local exon 110427 113921 . - . insertions 0 ; deletions 10 utg18_pilon exonerate:protein2genome:local similarity 110427 113921 4166 - . alignment_id 0 ; Query GL50803_15016-t26_1-p1 ; Align 113922 1 1380 ; Align 112542 462 21 ; Align 112521 470 942 ; Align 111579 786 105 ; Align 111474 826 522 ; Align 110952 1001 525 utg18_pilon exonerate:protein2genome:local gene 114199 115536 1745 - . gene_id 0 ; sequence GL50803_15017-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 114199 115536 . - . utg18_pilon exonerate:protein2genome:local exon 114199 115536 . - . insertions 15 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 114199 115536 1745 - . alignment_id 0 ; Query GL50803_15017-t26_1-p1 ; Align 115537 1 921 ; Align 114601 308 402 utg47_pilon exonerate:protein2genome:local gene 1441084 1442448 1886 - . gene_id 0 ; sequence GL50803_15022-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1441084 1442448 . - . utg47_pilon exonerate:protein2genome:local exon 1441084 1442448 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1441084 1442448 1886 - . alignment_id 0 ; Query GL50803_15022-t26_1-p1 ; Align 1442449 1 1365 utg47_pilon exonerate:protein2genome:local gene 1442483 1445089 3835 - . gene_id 0 ; sequence GL50803_15023-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1442483 1445089 . - . utg47_pilon exonerate:protein2genome:local exon 1442483 1445089 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1442483 1445089 3835 - . alignment_id 0 ; Query GL50803_15023-t26_1-p1 ; Align 1445090 1 2607 utg212_pilon exonerate:protein2genome:local gene 435889 437656 2420 - . gene_id 0 ; sequence GL50803_15026-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 435889 437656 . - . utg212_pilon exonerate:protein2genome:local exon 435889 437656 . - . insertions 0 ; deletions 2 ; frameshifts 4 utg212_pilon exonerate:protein2genome:local similarity 435889 437656 2420 - . alignment_id 0 ; Query GL50803_15026-t26_1-p1 ; Align 437657 3 120 ; Align 437536 43 3 ; Align 437533 45 69 ; Align 437463 68 612 ; Align 436849 273 960 utg212_pilon exonerate:protein2genome:local gene 424741 425487 1019 + . gene_id 0 ; sequence GL50803_15030-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 424741 425487 . + . utg212_pilon exonerate:protein2genome:local exon 424741 425487 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 424741 425487 1019 + . alignment_id 0 ; Query GL50803_15030-t26_1-p1 ; Align 424741 1 747 utg18_pilon exonerate:protein2genome:local gene 542590 543360 934 + . gene_id 0 ; sequence GL50803_15034-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 542590 543360 . + . utg18_pilon exonerate:protein2genome:local exon 542590 543360 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 542590 543360 934 + . alignment_id 0 ; Query GL50803_15034-t26_1-p1 ; Align 542590 1 771 utg18_pilon exonerate:protein2genome:local gene 540126 541726 2086 - . gene_id 0 ; sequence GL50803_15035-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 540126 541726 . - . utg18_pilon exonerate:protein2genome:local exon 540126 541726 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local similarity 540126 541726 2086 - . alignment_id 0 ; Query GL50803_15035-t26_1-p1 ; Align 541727 1 36 ; Align 541689 13 1563 utg18_pilon exonerate:protein2genome:local gene 533718 534833 1536 + . gene_id 0 ; sequence GL50803_15039-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 533718 534833 . + . utg18_pilon exonerate:protein2genome:local exon 533718 534833 . + . insertions 9 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 533718 534833 1536 + . alignment_id 0 ; Query GL50803_15039-t26_1-p1 ; Align 533718 1 144 ; Align 533871 49 963 utg18_pilon exonerate:protein2genome:local gene 533033 533722 897 + . gene_id 0 ; sequence GL50803_15041-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 533033 533722 . + . utg18_pilon exonerate:protein2genome:local exon 533033 533722 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 533033 533722 897 + . alignment_id 0 ; Query GL50803_15041-t26_1-p1 ; Align 533033 1 690 utg18_pilon exonerate:protein2genome:local gene 531721 533019 2150 + . gene_id 0 ; sequence GL50803_15042-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 531721 533019 . + . utg18_pilon exonerate:protein2genome:local exon 531721 533019 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 531721 533019 2150 + . alignment_id 0 ; Query GL50803_15042-t26_1-p1 ; Align 531721 1 1299 utg18_pilon exonerate:protein2genome:local gene 525430 526158 913 + . gene_id 0 ; sequence GL50803_15045-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 525430 526158 . + . utg18_pilon exonerate:protein2genome:local exon 525430 526158 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 525430 526158 913 + . alignment_id 0 ; Query GL50803_15045-t26_1-p1 ; Align 525430 1 729 utg18_pilon exonerate:protein2genome:local gene 524935 525339 690 - . gene_id 0 ; sequence GL50803_15046-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 524935 525339 . - . utg18_pilon exonerate:protein2genome:local exon 524935 525339 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 524935 525339 690 - . alignment_id 0 ; Query GL50803_15046-t26_1-p1 ; Align 525340 1 405 utg47_pilon exonerate:protein2genome:local gene 880241 882209 3368 + . gene_id 0 ; sequence GL50803_15048-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 880241 882209 . + . utg47_pilon exonerate:protein2genome:local exon 880241 882209 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 880241 882209 3368 + . alignment_id 0 ; Query GL50803_15048-t26_1-p1 ; Align 880241 1 861 ; Align 881103 288 1107 utg47_pilon exonerate:protein2genome:local gene 882309 884364 2979 + . gene_id 0 ; sequence GL50803_15049-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 882309 884364 . + . utg47_pilon exonerate:protein2genome:local exon 882309 884364 . + . insertions 3 ; deletions 2 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 882309 884364 2979 + . alignment_id 0 ; Query GL50803_15049-t26_1-p1 ; Align 882309 1 816 ; Align 883127 274 195 ; Align 883324 340 51 ; Align 883378 357 987 utg47_pilon exonerate:protein2genome:local gene 897305 897589 320 - . gene_id 0 ; sequence GL50803_15053-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 897305 897589 . - . utg47_pilon exonerate:protein2genome:local exon 897305 897589 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 897305 897589 320 - . alignment_id 0 ; Query GL50803_15053-t26_1-p1 ; Align 897590 1 204 ; Align 897386 70 81 utg47_pilon exonerate:protein2genome:local gene 898130 902674 7030 - . gene_id 0 ; sequence GL50803_15054-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 898130 902674 . - . utg47_pilon exonerate:protein2genome:local exon 898130 902674 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 898130 902674 7030 - . alignment_id 0 ; Query GL50803_15054-t26_1-p1 ; Align 902675 1 1446 ; Align 901226 483 3096 utg64_pilon exonerate:protein2genome:local gene 796693 797801 1444 - . gene_id 0 ; sequence GL50803_15062-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 796693 797801 . - . utg64_pilon exonerate:protein2genome:local exon 796693 797801 . - . insertions 0 ; deletions 2 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 796693 797801 1444 - . alignment_id 0 ; Query GL50803_15062-t26_1-p1 ; Align 797802 1 456 ; Align 797346 154 525 ; Align 796819 330 126 utg64_pilon exonerate:protein2genome:local gene 800560 802624 3282 + . gene_id 0 ; sequence GL50803_15063-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 800560 802624 . + . utg64_pilon exonerate:protein2genome:local exon 800560 802624 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 800560 802624 3282 + . alignment_id 0 ; Query GL50803_15063-t26_1-p1 ; Align 800560 6 1209 ; Align 801770 409 855 utg64_pilon exonerate:protein2genome:local gene 802642 804357 2148 - . gene_id 0 ; sequence GL50803_15064-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 803184 804357 . - . utg64_pilon exonerate:protein2genome:local exon 803184 804357 . - . insertions 0 ; deletions 5 utg64_pilon exonerate:protein2genome:local splice5 803182 803183 . - . intron_id 1 ; splice_site "TT" utg64_pilon exonerate:protein2genome:local intron 803145 803183 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 803145 803146 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 802642 803144 . - . utg64_pilon exonerate:protein2genome:local exon 802642 803144 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 802642 804357 2148 - . alignment_id 0 ; Query GL50803_15064-t26_1-p1 ; Align 804358 1 1113 ; Align 803245 377 60 ; Align 803143 398 501 utg64_pilon exonerate:protein2genome:local gene 819830 821299 2107 + . gene_id 0 ; sequence GL50803_15067-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 819830 821299 . + . utg64_pilon exonerate:protein2genome:local exon 819830 821299 . + . insertions 12 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 819830 821299 2107 + . alignment_id 0 ; Query GL50803_15067-t26_1-p1 ; Align 819830 1 693 ; Align 820535 232 765 utg11_pilon exonerate:protein2genome:local gene 142763 143737 1506 - . gene_id 0 ; sequence GL50803_15076-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 142763 143737 . - . utg11_pilon exonerate:protein2genome:local exon 142763 143737 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 142763 143737 1506 - . alignment_id 0 ; Query GL50803_15076-t26_1-p1 ; Align 143738 1 975 utg11_pilon exonerate:protein2genome:local gene 143764 145059 1739 + . gene_id 0 ; sequence GL50803_15077-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 143764 145059 . + . utg11_pilon exonerate:protein2genome:local exon 143764 145059 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 143764 145059 1739 + . alignment_id 0 ; Query GL50803_15077-t26_1-p1 ; Align 143764 1 1296 utg11_pilon exonerate:protein2genome:local gene 152286 153476 1545 + . gene_id 0 ; sequence GL50803_15078-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 152286 153476 . + . utg11_pilon exonerate:protein2genome:local exon 152286 153476 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 152286 153476 1545 + . alignment_id 0 ; Query GL50803_15078-t26_1-p1 ; Align 152286 1 1191 utg11_pilon exonerate:protein2genome:local gene 155813 156418 947 + . gene_id 0 ; sequence GL50803_15080-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 155813 156418 . + . utg11_pilon exonerate:protein2genome:local exon 155813 156418 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 155813 156418 947 + . alignment_id 0 ; Query GL50803_15080-t26_1-p1 ; Align 155813 1 606 utg11_pilon exonerate:protein2genome:local gene 156451 158265 2534 + . gene_id 0 ; sequence GL50803_15081-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 156451 158265 . + . utg11_pilon exonerate:protein2genome:local exon 156451 158265 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 156451 158265 2534 + . alignment_id 0 ; Query GL50803_15081-t26_1-p1 ; Align 156451 1 1815 utg11_pilon exonerate:protein2genome:local gene 1329274 1332952 4461 - . gene_id 0 ; sequence GL50803_15084-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1329274 1332952 . - . utg11_pilon exonerate:protein2genome:local exon 1329274 1332952 . - . insertions 0 ; deletions 3 ; frameshifts 4 utg11_pilon exonerate:protein2genome:local similarity 1329274 1332952 4461 - . alignment_id 0 ; Query GL50803_15084-t26_1-p1 ; Align 1332953 1 555 ; Align 1332396 186 3 ; Align 1332393 188 882 ; Align 1331511 483 24 ; Align 1331485 491 30 ; Align 1331455 502 2181 utg11_pilon exonerate:protein2genome:local gene 1359438 1360499 1173 - . gene_id 0 ; sequence GL50803_15085-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1359438 1360499 . - . utg11_pilon exonerate:protein2genome:local exon 1359438 1360499 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1359438 1360499 1173 - . alignment_id 0 ; Query GL50803_15085-t26_1-p1 ; Align 1360500 1 1062 utg731_pilon exonerate:protein2genome:local gene 795210 795881 983 - . gene_id 0 ; sequence GL50803_15089-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 795210 795881 . - . utg731_pilon exonerate:protein2genome:local exon 795210 795881 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 795210 795881 983 - . alignment_id 0 ; Query GL50803_15089-t26_1-p1 ; Align 795882 1 672 utg731_pilon exonerate:protein2genome:local gene 792094 793641 2640 - . gene_id 0 ; sequence GL50803_15090-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 792094 793641 . - . utg731_pilon exonerate:protein2genome:local exon 792094 793641 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 792094 793641 2640 - . alignment_id 0 ; Query GL50803_15090-t26_1-p1 ; Align 793642 1 1548 utg308_pilon exonerate:protein2genome:local gene 794045 794713 924 - . gene_id 0 ; sequence GL50803_15093-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 794045 794713 . - . utg308_pilon exonerate:protein2genome:local exon 794045 794713 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 794045 794713 924 - . alignment_id 0 ; Query GL50803_15093-t26_1-p1 ; Align 794714 1 669 utg731_pilon exonerate:protein2genome:local gene 784010 784561 843 - . gene_id 0 ; sequence GL50803_15094-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 784010 784561 . - . utg731_pilon exonerate:protein2genome:local exon 784010 784561 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 784010 784561 843 - . alignment_id 0 ; Query GL50803_15094-t26_1-p1 ; Align 784562 1 552 utg349_pilon exonerate:protein2genome:local gene 1259763 1260770 1641 - . gene_id 0 ; sequence GL50803_15097-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1259763 1260770 . - . utg349_pilon exonerate:protein2genome:local exon 1259763 1260770 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1259763 1260770 1641 - . alignment_id 0 ; Query GL50803_15097-t26_1-p1 ; Align 1260771 1 984 ; Align 1259787 330 24 utg47_pilon exonerate:protein2genome:local gene 346915 347556 1037 + . gene_id 0 ; sequence GL50803_15099-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 346915 347556 . + . utg47_pilon exonerate:protein2genome:local exon 346915 347556 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 346915 347556 1037 + . alignment_id 0 ; Query GL50803_15099-t26_1-p1 ; Align 346915 1 642 utg47_pilon exonerate:protein2genome:local gene 337386 338315 1378 + . gene_id 0 ; sequence GL50803_15101-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 337386 338315 . + . utg47_pilon exonerate:protein2genome:local exon 337386 338315 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 337386 338315 1378 + . alignment_id 0 ; Query GL50803_15101-t26_1-p1 ; Align 337386 1 930 utg364_pilon exonerate:protein2genome:local gene 58189 59613 1663 + . gene_id 0 ; sequence GL50803_15103-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 58189 59613 . + . utg364_pilon exonerate:protein2genome:local exon 58189 59613 . + . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 58189 59613 1663 + . alignment_id 0 ; Query GL50803_15103-t26_1-p1 ; Align 58189 1 1425 utg364_pilon exonerate:protein2genome:local gene 61508 63586 3022 + . gene_id 0 ; sequence GL50803_15104-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 61508 63586 . + . utg364_pilon exonerate:protein2genome:local exon 61508 63586 . + . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 61508 63586 3022 + . alignment_id 0 ; Query GL50803_15104-t26_1-p1 ; Align 61508 16 2079 utg364_pilon exonerate:protein2genome:local gene 69624 70394 956 + . gene_id 0 ; sequence GL50803_15105-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 69624 70394 . + . utg364_pilon exonerate:protein2genome:local exon 69624 70394 . + . insertions 3 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 69624 70394 956 + . alignment_id 0 ; Query GL50803_15105-t26_1-p1 ; Align 69624 1 444 ; Align 70071 149 324 utg364_pilon exonerate:protein2genome:local gene 72376 75828 5584 - . gene_id 0 ; sequence GL50803_15106-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 72376 75828 . - . utg364_pilon exonerate:protein2genome:local exon 72376 75828 . - . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 72376 75828 5584 - . alignment_id 0 ; Query GL50803_15106-t26_1-p1 ; Align 75829 1 3453 utg47_pilon exonerate:protein2genome:local gene 408176 412174 3848 + . gene_id 0 ; sequence GL50803_15109-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 408176 412174 . + . utg47_pilon exonerate:protein2genome:local exon 408176 412174 . + . insertions 6 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 408176 412174 3848 + . alignment_id 0 ; Query GL50803_15109-t26_1-p1 ; Align 408176 1 1113 ; Align 409289 373 747 ; Align 410042 622 1050 ; Align 411092 973 786 ; Align 411878 1237 297 utg47_pilon exonerate:protein2genome:local gene 415112 415660 836 - . gene_id 0 ; sequence GL50803_15110-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 415112 415660 . - . utg47_pilon exonerate:protein2genome:local exon 415112 415660 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 415112 415660 836 - . alignment_id 0 ; Query GL50803_15110-t26_1-p1 ; Align 415661 1 549 utg47_pilon exonerate:protein2genome:local gene 419181 421268 2823 + . gene_id 0 ; sequence GL50803_15112-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 419181 421268 . + . utg47_pilon exonerate:protein2genome:local exon 419181 421268 . + . insertions 0 ; deletions 11 utg47_pilon exonerate:protein2genome:local similarity 419181 421268 2823 + . alignment_id 0 ; Query GL50803_15112-t26_1-p1 ; Align 419181 1 126 ; Align 419307 47 162 ; Align 419469 103 279 ; Align 419748 197 1365 ; Align 421113 656 156 utg47_pilon exonerate:protein2genome:local gene 422371 423765 2140 + . gene_id 0 ; sequence GL50803_15113-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 422371 423765 . + . utg47_pilon exonerate:protein2genome:local exon 422371 423765 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 422371 423765 2140 + . alignment_id 0 ; Query GL50803_15113-t26_1-p1 ; Align 422371 1 162 ; Align 422533 56 1233 utg11_pilon exonerate:protein2genome:local gene 1546924 1547625 1146 - . gene_id 0 ; sequence GL50803_15120-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1546924 1547625 . - . utg11_pilon exonerate:protein2genome:local exon 1546924 1547625 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1546924 1547625 1146 - . alignment_id 0 ; Query GL50803_15120-t26_1-p1 ; Align 1547626 1 702 utg18_pilon exonerate:protein2genome:local gene 131384 178532 2002 - . gene_id 0 ; sequence GL50803_15123-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 176895 178532 . - . utg18_pilon exonerate:protein2genome:local exon 176895 178532 . - . insertions 15 ; deletions 3 utg18_pilon exonerate:protein2genome:local splice5 176893 176894 . - . intron_id 1 ; splice_site "CT" utg18_pilon exonerate:protein2genome:local intron 131531 176894 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 131531 131532 . - . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 131384 131530 . - . utg18_pilon exonerate:protein2genome:local exon 131384 131530 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 131384 178532 2002 - . alignment_id 0 ; Query GL50803_15123-t26_1-p1 ; Align 178533 1 261 ; Align 178269 88 186 ; Align 178080 150 258 ; Align 177822 237 51 ; Align 177771 256 549 ; Align 177219 439 9 ; Align 177204 442 309 ; Align 131531 545 147 utg308_pilon exonerate:protein2genome:local gene 176473 176772 498 - . gene_id 0 ; sequence GL50803_15124-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 176473 176772 . - . utg308_pilon exonerate:protein2genome:local exon 176473 176772 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 176473 176772 498 - . alignment_id 0 ; Query GL50803_15124-t26_1-p1 ; Align 176773 1 300 utg308_pilon exonerate:protein2genome:local gene 169451 170227 793 + . gene_id 0 ; sequence GL50803_15125-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 169451 170227 . + . utg308_pilon exonerate:protein2genome:local exon 169451 170227 . + . insertions 12 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 169451 170227 793 + . alignment_id 0 ; Query GL50803_15125-t26_1-p1 ; Align 169451 4 111 ; Align 169565 41 519 ; Align 170093 214 135 utg308_pilon exonerate:protein2genome:local gene 168714 169340 994 + . gene_id 0 ; sequence GL50803_15126-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 168714 169340 . + . utg308_pilon exonerate:protein2genome:local exon 168714 169340 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 168714 169340 994 + . alignment_id 0 ; Query GL50803_15126-t26_1-p1 ; Align 168714 1 627 utg308_pilon exonerate:protein2genome:local gene 163969 164736 1173 - . gene_id 0 ; sequence GL50803_15127-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 163969 164736 . - . utg308_pilon exonerate:protein2genome:local exon 163969 164736 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 163969 164736 1173 - . alignment_id 0 ; Query GL50803_15127-t26_1-p1 ; Align 164737 1 768 utg308_pilon exonerate:protein2genome:local gene 160769 161176 682 - . gene_id 0 ; sequence GL50803_15130-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 160769 161176 . - . utg308_pilon exonerate:protein2genome:local exon 160769 161176 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 160769 161176 682 - . alignment_id 0 ; Query GL50803_15130-t26_1-p1 ; Align 161177 1 408 utg731_pilon exonerate:protein2genome:local gene 403850 406951 4070 - . gene_id 0 ; sequence GL50803_15134-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 403850 406951 . - . utg731_pilon exonerate:protein2genome:local exon 403850 406951 . - . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 403850 406951 4070 - . alignment_id 0 ; Query GL50803_15134-t26_1-p1 ; Align 406952 1 1476 ; Align 405476 496 1626 utg731_pilon exonerate:protein2genome:local gene 413082 413699 556 + . gene_id 0 ; sequence GL50803_15135-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 413082 413699 . + . utg731_pilon exonerate:protein2genome:local exon 413082 413699 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 413082 413699 556 + . alignment_id 0 ; Query GL50803_15135-t26_1-p1 ; Align 413082 1 618 utg731_pilon exonerate:protein2genome:local gene 426347 426988 674 - . gene_id 0 ; sequence GL50803_15137-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 426347 426988 . - . utg731_pilon exonerate:protein2genome:local exon 426347 426988 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 426347 426988 674 - . alignment_id 0 ; Query GL50803_15137-t26_1-p1 ; Align 426989 1 642 utg64_pilon exonerate:protein2genome:local gene 942518 943006 741 - . gene_id 0 ; sequence GL50803_15139-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 942518 943006 . - . utg64_pilon exonerate:protein2genome:local exon 942518 943006 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 942518 943006 741 - . alignment_id 0 ; Query GL50803_15139-t26_1-p1 ; Align 943007 1 489 utg64_pilon exonerate:protein2genome:local gene 703664 704113 736 - . gene_id 0 ; sequence GL50803_15144-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 703664 704113 . - . utg64_pilon exonerate:protein2genome:local exon 703664 704113 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 703664 704113 736 - . alignment_id 0 ; Query GL50803_15144-t26_1-p1 ; Align 704114 1 450 utg64_pilon exonerate:protein2genome:local gene 706400 708391 2716 + . gene_id 0 ; sequence GL50803_15145-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 706400 708391 . + . utg64_pilon exonerate:protein2genome:local exon 706400 708391 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 706400 708391 2716 + . alignment_id 0 ; Query GL50803_15145-t26_1-p1 ; Align 706400 1 1992 utg731_pilon exonerate:protein2genome:local gene 133079 134908 2791 + . gene_id 0 ; sequence GL50803_15148-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 133079 134908 . + . utg731_pilon exonerate:protein2genome:local exon 133079 134908 . + . insertions 3 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 133079 134908 2791 + . alignment_id 0 ; Query GL50803_15148-t26_1-p1 ; Align 133079 1 1659 ; Align 134741 554 72 ; Align 134813 580 45 ; Align 134858 596 51 utg731_pilon exonerate:protein2genome:local gene 137657 140395 3570 - . gene_id 0 ; sequence GL50803_15149-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 137657 140395 . - . utg731_pilon exonerate:protein2genome:local exon 137657 140395 . - . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 137657 140395 3570 - . alignment_id 0 ; Query GL50803_15149-t26_1-p1 ; Align 140396 1 2181 ; Align 138206 728 549 utg64_pilon exonerate:protein2genome:local gene 175302 175946 614 + . gene_id 0 ; sequence GL50803_15154-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 175302 175946 . + . utg64_pilon exonerate:protein2genome:local exon 175302 175946 . + . insertions 18 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 175302 175946 614 + . alignment_id 0 ; Query GL50803_15154-t26_1-p1 ; Align 175302 1 96 ; Align 175404 33 372 ; Align 175788 157 159 utg64_pilon exonerate:protein2genome:local gene 164933 166522 2577 + . gene_id 0 ; sequence GL50803_15156-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 164933 166522 . + . utg64_pilon exonerate:protein2genome:local exon 164933 166522 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 164933 166522 2577 + . alignment_id 0 ; Query GL50803_15156-t26_1-p1 ; Align 164933 1 1590 utg64_pilon exonerate:protein2genome:local gene 163534 164733 1709 - . gene_id 0 ; sequence GL50803_15157-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 163534 164733 . - . utg64_pilon exonerate:protein2genome:local exon 163534 164733 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 163534 164733 1709 - . alignment_id 0 ; Query GL50803_15157-t26_1-p1 ; Align 164734 1 1200 utg11_pilon exonerate:protein2genome:local gene 109121 109330 256 + . gene_id 0 ; sequence GL50803_15158-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 109121 109330 . + . utg11_pilon exonerate:protein2genome:local exon 109121 109330 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 109121 109330 256 + . alignment_id 0 ; Query GL50803_15158-t26_1-p1 ; Align 109121 1 210 utg11_pilon exonerate:protein2genome:local gene 1196232 1196708 852 - . gene_id 0 ; sequence GL50803_15162-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1196232 1196708 . - . utg11_pilon exonerate:protein2genome:local exon 1196232 1196708 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1196232 1196708 852 - . alignment_id 0 ; Query GL50803_15162-t26_1-p1 ; Align 1196709 1 477 utg11_pilon exonerate:protein2genome:local gene 1185855 1186961 1707 - . gene_id 0 ; sequence GL50803_15164-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1185855 1186961 . - . utg11_pilon exonerate:protein2genome:local exon 1185855 1186961 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1185855 1186961 1707 - . alignment_id 0 ; Query GL50803_15164-t26_1-p1 ; Align 1186962 1 1107 utg11_pilon exonerate:protein2genome:local gene 1170559 1171212 823 + . gene_id 0 ; sequence GL50803_15166-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1170559 1171212 . + . utg11_pilon exonerate:protein2genome:local exon 1170559 1171212 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1170559 1171212 823 + . alignment_id 0 ; Query GL50803_15166-t26_1-p1 ; Align 1170559 15 654 utg11_pilon exonerate:protein2genome:local gene 690276 692105 2202 - . gene_id 0 ; sequence GL50803_15184-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 690276 692105 . - . utg11_pilon exonerate:protein2genome:local exon 690276 692105 . - . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 690276 692105 2202 - . alignment_id 0 ; Query GL50803_15184-t26_1-p1 ; Align 692106 1 1107 ; Align 690996 370 573 ; Align 690423 562 147 utg11_pilon exonerate:protein2genome:local gene 693688 694840 1654 - . gene_id 0 ; sequence GL50803_15186-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 693688 694840 . - . utg11_pilon exonerate:protein2genome:local exon 693688 694840 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 693688 694840 1654 - . alignment_id 0 ; Query GL50803_15186-t26_1-p1 ; Align 694841 1 111 ; Align 694729 38 1041 utg11_pilon exonerate:protein2genome:local gene 694801 696551 2650 + . gene_id 0 ; sequence GL50803_15187-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 694801 696551 . + . utg11_pilon exonerate:protein2genome:local exon 694801 696551 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 694801 696551 2650 + . alignment_id 0 ; Query GL50803_15187-t26_1-p1 ; Align 694801 1 1161 ; Align 695964 389 588 utg11_pilon exonerate:protein2genome:local gene 713576 716481 3935 - . gene_id 0 ; sequence GL50803_15190-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 713576 716481 . - . utg11_pilon exonerate:protein2genome:local exon 713576 716481 . - . insertions 6 ; deletions 7 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 713576 716481 3935 - . alignment_id 0 ; Query GL50803_15190-t26_1-p1 ; Align 716482 1 624 ; Align 715856 210 1590 ; Align 714260 740 180 ; Align 714080 802 57 ; Align 714023 825 447 utg11_pilon exonerate:protein2genome:local gene 717876 718361 582 - . gene_id 0 ; sequence GL50803_15191-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 717876 718361 . - . utg11_pilon exonerate:protein2genome:local exon 717876 718361 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 717876 718361 582 - . alignment_id 0 ; Query GL50803_15191-t26_1-p1 ; Align 718362 38 486 utg11_pilon exonerate:protein2genome:local gene 720946 723511 2739 - . gene_id 0 ; sequence GL50803_15192-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 720946 723511 . - . utg11_pilon exonerate:protein2genome:local exon 720946 723511 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 720946 723511 2739 - . alignment_id 0 ; Query GL50803_15192-t26_1-p1 ; Align 723512 2 102 ; Align 723410 37 6 ; Align 723403 39 2457 utg11_pilon exonerate:protein2genome:local gene 723411 724328 1190 + . gene_id 0 ; sequence GL50803_15193-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 723411 724328 . + . utg11_pilon exonerate:protein2genome:local exon 723411 724328 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 723411 724328 1190 + . alignment_id 0 ; Query GL50803_15193-t26_1-p1 ; Align 723411 11 918 utg47_pilon exonerate:protein2genome:local gene 1822731 1823300 814 + . gene_id 0 ; sequence GL50803_15196-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1822731 1823300 . + . utg47_pilon exonerate:protein2genome:local exon 1822731 1823300 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1822731 1823300 814 + . alignment_id 0 ; Query GL50803_15196-t26_1-p1 ; Align 1822731 24 63 ; Align 1822797 45 504 utg11_pilon exonerate:protein2genome:local gene 432117 432734 919 + . gene_id 0 ; sequence GL50803_15204-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 432117 432734 . + . utg11_pilon exonerate:protein2genome:local exon 432117 432734 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 432117 432734 919 + . alignment_id 0 ; Query GL50803_15204-t26_1-p1 ; Align 432117 1 618 utg11_pilon exonerate:protein2genome:local gene 432854 433576 1104 + . gene_id 0 ; sequence GL50803_15205-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 432854 433576 . + . utg11_pilon exonerate:protein2genome:local exon 432854 433576 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 432854 433576 1104 + . alignment_id 0 ; Query GL50803_15205-t26_1-p1 ; Align 432854 1 723 utg212_pilon exonerate:protein2genome:local gene 14045 115880 683 + . gene_id 0 ; sequence GL50803_15206-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14045 14327 . + . utg212_pilon exonerate:protein2genome:local exon 14045 14327 . + . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local splice5 14328 14329 . + . intron_id 1 ; splice_site "GC" utg212_pilon exonerate:protein2genome:local intron 14328 56795 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 56794 56795 . + . intron_id 0 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local cds 56796 57005 . + . utg212_pilon exonerate:protein2genome:local exon 56796 57005 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 57006 57007 . + . intron_id 2 ; splice_site "AT" utg212_pilon exonerate:protein2genome:local intron 57006 115737 . + . intron_id 2 utg212_pilon exonerate:protein2genome:local splice3 115736 115737 . + . intron_id 1 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local cds 115738 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115738 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14045 115880 683 + . alignment_id 0 ; Query GL50803_15206-t26_1-p1 ; Align 14045 1 81 ; Align 14126 29 201 ; Align 56798 97 207 ; Align 115740 167 141 utg64_pilon exonerate:protein2genome:local gene 322980 324065 1624 - . gene_id 0 ; sequence GL50803_15213-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 322980 324065 . - . utg64_pilon exonerate:protein2genome:local exon 322980 324065 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 322980 324065 1624 - . alignment_id 0 ; Query GL50803_15213-t26_1-p1 ; Align 324066 1 1086 utg64_pilon exonerate:protein2genome:local gene 324254 325177 1617 + . gene_id 0 ; sequence GL50803_15214-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 324254 325177 . + . utg64_pilon exonerate:protein2genome:local exon 324254 325177 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 324254 325177 1617 + . alignment_id 0 ; Query GL50803_15214-t26_1-p1 ; Align 324254 1 924 utg64_pilon exonerate:protein2genome:local gene 325338 326267 1612 + . gene_id 0 ; sequence GL50803_15215-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 325338 326267 . + . utg64_pilon exonerate:protein2genome:local exon 325338 326267 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 325338 326267 1612 + . alignment_id 0 ; Query GL50803_15215-t26_1-p1 ; Align 325338 1 930 utg64_pilon exonerate:protein2genome:local gene 327331 330390 4480 + . gene_id 0 ; sequence GL50803_15216-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 327331 330390 . + . utg64_pilon exonerate:protein2genome:local exon 327331 330390 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 327331 330390 4480 + . alignment_id 0 ; Query GL50803_15216-t26_1-p1 ; Align 327331 1 2364 ; Align 329695 790 696 utg64_pilon exonerate:protein2genome:local gene 337940 340282 3940 - . gene_id 0 ; sequence GL50803_15218-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 337940 340282 . - . utg64_pilon exonerate:protein2genome:local exon 337940 340282 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 337940 340282 3940 - . alignment_id 0 ; Query GL50803_15218-t26_1-p1 ; Align 340283 7 2343 utg64_pilon exonerate:protein2genome:local gene 342922 344094 1642 - . gene_id 0 ; sequence GL50803_15219-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 342922 344094 . - . utg64_pilon exonerate:protein2genome:local exon 342922 344094 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 342922 344094 1642 - . alignment_id 0 ; Query GL50803_15219-t26_1-p1 ; Align 344095 1 1173 utg308_pilon exonerate:protein2genome:local gene 794045 794684 346 - . gene_id 0 ; sequence GL50803_15222-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 794441 794684 . - . utg308_pilon exonerate:protein2genome:local exon 794441 794684 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local splice5 794439 794440 . - . intron_id 1 ; splice_site "CT" utg308_pilon exonerate:protein2genome:local intron 794313 794440 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 794313 794314 . - . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 794045 794312 . - . utg308_pilon exonerate:protein2genome:local exon 794045 794312 . - . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 794045 794684 346 - . alignment_id 0 ; Query GL50803_15222-t26_1-p1 ; Align 794685 15 117 ; Align 794567 54 36 ; Align 794530 66 87 ; Align 794312 96 33 ; Align 794279 109 234 utg308_pilon exonerate:protein2genome:local gene 190239 190394 172 - . gene_id 0 ; sequence GL50803_15223-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 190239 190394 . - . utg308_pilon exonerate:protein2genome:local exon 190239 190394 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 190239 190394 172 - . alignment_id 0 ; Query GL50803_15223-t26_1-p1 ; Align 190395 2 156 utg308_pilon exonerate:protein2genome:local gene 415578 416444 997 - . gene_id 0 ; sequence GL50803_15226-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 415578 416444 . - . utg308_pilon exonerate:protein2genome:local exon 415578 416444 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 415578 416444 997 - . alignment_id 0 ; Query GL50803_15226-t26_1-p1 ; Align 416445 1 471 ; Align 415974 159 396 utg308_pilon exonerate:protein2genome:local gene 419185 419574 659 + . gene_id 0 ; sequence GL50803_15228-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 419185 419574 . + . utg308_pilon exonerate:protein2genome:local exon 419185 419574 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 419185 419574 659 + . alignment_id 0 ; Query GL50803_15228-t26_1-p1 ; Align 419185 1 390 utg47_pilon exonerate:protein2genome:local gene 153993 156525 2916 - . gene_id 0 ; sequence GL50803_15232-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 153993 156525 . - . utg47_pilon exonerate:protein2genome:local exon 153993 156525 . - . insertions 0 ; deletions 3 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 153993 156525 2916 - . alignment_id 0 ; Query GL50803_15232-t26_1-p1 ; Align 156526 1 810 ; Align 155716 272 69 ; Align 155646 295 3 ; Align 155643 297 624 ; Align 155019 506 1026 utg212_pilon exonerate:protein2genome:local gene 164371 555594 1230 + . gene_id 0 ; sequence GL50803_15237-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 164371 165116 . + . utg212_pilon exonerate:protein2genome:local exon 164371 165116 . + . insertions 30 ; deletions 7 utg212_pilon exonerate:protein2genome:local splice5 165117 165118 . + . intron_id 1 ; splice_site "GT" utg212_pilon exonerate:protein2genome:local intron 165117 355677 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 355676 355677 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 355678 355683 . + . utg212_pilon exonerate:protein2genome:local exon 355678 355683 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 355684 355685 . + . intron_id 2 ; splice_site "GT" utg212_pilon exonerate:protein2genome:local intron 355684 473244 . + . intron_id 2 utg212_pilon exonerate:protein2genome:local splice3 473243 473244 . + . intron_id 1 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local cds 473245 473358 . + . utg212_pilon exonerate:protein2genome:local exon 473245 473358 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 473359 473360 . + . intron_id 3 ; splice_site "GT" utg212_pilon exonerate:protein2genome:local intron 473359 514056 . + . intron_id 3 utg212_pilon exonerate:protein2genome:local splice3 514055 514056 . + . intron_id 2 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 514057 514661 . + . utg212_pilon exonerate:protein2genome:local exon 514057 514661 . + . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 514662 514663 . + . intron_id 4 ; splice_site "GC" utg212_pilon exonerate:protein2genome:local intron 514662 555505 . + . intron_id 4 utg212_pilon exonerate:protein2genome:local splice3 555504 555505 . + . intron_id 3 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local cds 555506 555594 . + . utg212_pilon exonerate:protein2genome:local exon 555506 555594 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 164371 555594 1230 + . alignment_id 0 ; Query GL50803_15237-t26_1-p1 ; Align 164371 1 105 ; Align 164479 36 45 ; Align 164530 51 45 ; Align 164578 66 21 ; Align 164599 75 54 ; Align 164662 93 69 ; Align 164731 118 87 ; Align 164818 150 36 ; Align 164857 162 69 ; Align 164929 185 114 ; Align 165046 223 69 ; Align 355679 247 3 ; Align 473246 249 111 ; Align 514058 287 249 ; Align 514310 370 351 ; Align 555508 488 87 utg47_pilon exonerate:protein2genome:local gene 187292 188752 1912 - . gene_id 0 ; sequence GL50803_15239-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 187292 188752 . - . utg47_pilon exonerate:protein2genome:local exon 187292 188752 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 187292 188752 1912 - . alignment_id 0 ; Query GL50803_15239-t26_1-p1 ; Align 188753 1 1461 utg47_pilon exonerate:protein2genome:local gene 188764 189999 1834 + . gene_id 0 ; sequence GL50803_15240-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 188764 189999 . + . utg47_pilon exonerate:protein2genome:local exon 188764 189999 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 188764 189999 1834 + . alignment_id 0 ; Query GL50803_15240-t26_1-p1 ; Align 188764 1 1236 utg11_pilon exonerate:protein2genome:local gene 473624 474307 1017 - . gene_id 0 ; sequence GL50803_15244-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 473624 474307 . - . utg11_pilon exonerate:protein2genome:local exon 473624 474307 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 473624 474307 1017 - . alignment_id 0 ; Query GL50803_15244-t26_1-p1 ; Align 474308 1 684 utg64_pilon exonerate:protein2genome:local gene 900544 903174 4171 - . gene_id 0 ; sequence GL50803_15247-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 900544 903174 . - . utg64_pilon exonerate:protein2genome:local exon 900544 903174 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 900544 903174 4171 - . alignment_id 0 ; Query GL50803_15247-t26_1-p1 ; Align 903175 1 2631 utg64_pilon exonerate:protein2genome:local gene 903266 904189 1415 - . gene_id 0 ; sequence GL50803_15248-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 903266 904189 . - . utg64_pilon exonerate:protein2genome:local exon 903266 904189 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 903266 904189 1415 - . alignment_id 0 ; Query GL50803_15248-t26_1-p1 ; Align 904190 18 924 utg11_pilon exonerate:protein2genome:local gene 1601578 1603446 2698 + . gene_id 0 ; sequence GL50803_15250-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1601578 1603446 . + . utg11_pilon exonerate:protein2genome:local exon 1601578 1603446 . + . insertions 12 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1601578 1603446 2698 + . alignment_id 0 ; Query GL50803_15250-t26_1-p1 ; Align 1601578 1 1758 ; Align 1603345 587 63 ; Align 1603411 608 36 utg99_pilon exonerate:protein2genome:local gene 99253 100132 1344 + . gene_id 0 ; sequence GL50803_15251-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 99253 100132 . + . utg99_pilon exonerate:protein2genome:local exon 99253 100132 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg99_pilon exonerate:protein2genome:local similarity 99253 100132 1344 + . alignment_id 0 ; Query GL50803_15251-t26_1-p1 ; Align 99253 1 324 ; Align 99578 109 528 ; Align 100106 286 27 utg99_pilon exonerate:protein2genome:local gene 111012 111531 817 + . gene_id 0 ; sequence GL50803_15252-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 111012 111531 . + . utg99_pilon exonerate:protein2genome:local exon 111012 111531 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg99_pilon exonerate:protein2genome:local similarity 111012 111531 817 + . alignment_id 0 ; Query GL50803_15252-t26_1-p1 ; Align 111012 5 42 ; Align 111055 19 18 ; Align 111073 26 459 utg731_pilon exonerate:protein2genome:local gene 1161742 1163286 1978 + . gene_id 0 ; sequence GL50803_15255-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1161742 1163286 . + . utg731_pilon exonerate:protein2genome:local exon 1161742 1163286 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1161742 1163286 1978 + . alignment_id 0 ; Query GL50803_15255-t26_1-p1 ; Align 1161742 1 705 ; Align 1162447 238 840 utg731_pilon exonerate:protein2genome:local gene 1165299 1166089 1078 - . gene_id 0 ; sequence GL50803_15256-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1165299 1166089 . - . utg731_pilon exonerate:protein2genome:local exon 1165299 1166089 . - . insertions 0 ; deletions 2 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 1165299 1166089 1078 - . alignment_id 0 ; Query GL50803_15256-t26_1-p1 ; Align 1166090 1 753 ; Align 1165335 252 6 ; Align 1165329 256 30 utg47_pilon exonerate:protein2genome:local gene 1711529 1711963 724 - . gene_id 0 ; sequence GL50803_15260-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1711529 1711963 . - . utg47_pilon exonerate:protein2genome:local exon 1711529 1711963 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1711529 1711963 724 - . alignment_id 0 ; Query GL50803_15260-t26_1-p1 ; Align 1711964 1 435 utg349_pilon exonerate:protein2genome:local gene 1123554 1127357 3723 + . gene_id 0 ; sequence GL50803_15264-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1123554 1127357 . + . utg349_pilon exonerate:protein2genome:local exon 1123554 1127357 . + . insertions 21 ; deletions 18 utg349_pilon exonerate:protein2genome:local similarity 1123554 1127357 3723 + . alignment_id 0 ; Query GL50803_15264-t26_1-p1 ; Align 1123554 1831 324 ; Align 1123890 1939 309 ; Align 1124199 2043 72 ; Align 1124271 2069 255 ; Align 1124526 2156 393 ; Align 1124919 2289 345 ; Align 1125264 2405 33 ; Align 1125297 2418 504 ; Align 1125801 2588 687 ; Align 1126488 2818 24 ; Align 1126521 2826 162 ; Align 1126683 2881 99 ; Align 1126782 2916 414 ; Align 1127196 3055 78 ; Align 1127274 3082 84 utg349_pilon exonerate:protein2genome:local gene 1097154 1098068 1202 - . gene_id 0 ; sequence GL50803_15265-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1097154 1098068 . - . utg349_pilon exonerate:protein2genome:local exon 1097154 1098068 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1097154 1098068 1202 - . alignment_id 0 ; Query GL50803_15265-t26_1-p1 ; Align 1098069 1 780 ; Align 1097286 261 132 utg308_pilon exonerate:protein2genome:local gene 94512 95261 977 - . gene_id 0 ; sequence GL50803_15267-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 94512 95261 . - . utg308_pilon exonerate:protein2genome:local exon 94512 95261 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 94512 95261 977 - . alignment_id 0 ; Query GL50803_15267-t26_1-p1 ; Align 95262 1 750 utg308_pilon exonerate:protein2genome:local gene 95357 98017 3754 - . gene_id 0 ; sequence GL50803_15268-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 95357 98017 . - . utg308_pilon exonerate:protein2genome:local exon 95357 98017 . - . insertions 15 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 95357 98017 3754 - . alignment_id 0 ; Query GL50803_15268-t26_1-p1 ; Align 98018 1 1518 ; Align 96485 507 1128 utg308_pilon exonerate:protein2genome:local gene 98599 100446 2372 + . gene_id 0 ; sequence GL50803_15269-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 98599 100446 . + . utg308_pilon exonerate:protein2genome:local exon 98599 100446 . + . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 98599 100446 2372 + . alignment_id 0 ; Query GL50803_15269-t26_1-p1 ; Align 98599 1 1566 ; Align 100165 524 123 ; Align 100288 566 159 utg308_pilon exonerate:protein2genome:local gene 110691 112211 1858 - . gene_id 0 ; sequence GL50803_15270-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 111206 112211 . - . utg308_pilon exonerate:protein2genome:local exon 111206 112211 . - . insertions 0 ; deletions 4 utg308_pilon exonerate:protein2genome:local splice5 111204 111205 . - . intron_id 1 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 111164 111205 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 111164 111165 . - . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 110691 111163 . - . utg308_pilon exonerate:protein2genome:local exon 110691 111163 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 110691 112211 1858 - . alignment_id 0 ; Query GL50803_15270-t26_1-p1 ; Align 112212 1 315 ; Align 111897 108 27 ; Align 111870 119 663 ; Align 111162 341 258 ; Align 110904 428 213 utg308_pilon exonerate:protein2genome:local gene 964274 965977 1946 + . gene_id 0 ; sequence GL50803_15276-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 964274 965977 . + . utg308_pilon exonerate:protein2genome:local exon 964274 965977 . + . insertions 3 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 964274 965977 1946 + . alignment_id 0 ; Query GL50803_15276-t26_1-p1 ; Align 964274 1 267 ; Align 964544 90 222 ; Align 964766 165 1212 utg11_pilon exonerate:protein2genome:local gene 597103 598204 1462 + . gene_id 0 ; sequence GL50803_15279-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 597103 598204 . + . utg11_pilon exonerate:protein2genome:local exon 597103 598204 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 597103 598204 1462 + . alignment_id 0 ; Query GL50803_15279-t26_1-p1 ; Align 597103 1 1044 ; Align 598148 350 57 utg11_pilon exonerate:protein2genome:local gene 594673 595350 874 - . gene_id 0 ; sequence GL50803_15280-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 594673 595350 . - . utg11_pilon exonerate:protein2genome:local exon 594673 595350 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 594673 595350 874 - . alignment_id 0 ; Query GL50803_15280-t26_1-p1 ; Align 595351 24 654 ; Align 594694 242 21 utg11_pilon exonerate:protein2genome:local gene 573339 574154 1099 + . gene_id 0 ; sequence GL50803_15284-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 573339 574154 . + . utg11_pilon exonerate:protein2genome:local exon 573339 574154 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 573339 574154 1099 + . alignment_id 0 ; Query GL50803_15284-t26_1-p1 ; Align 573339 1 816 utg11_pilon exonerate:protein2genome:local gene 570393 572006 2041 + . gene_id 0 ; sequence GL50803_15285-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 570393 572006 . + . utg11_pilon exonerate:protein2genome:local exon 570393 572006 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 570393 572006 2041 + . alignment_id 0 ; Query GL50803_15285-t26_1-p1 ; Align 570393 1 609 ; Align 571002 205 1005 utg349_pilon exonerate:protein2genome:local gene 517787 519085 2095 - . gene_id 0 ; sequence GL50803_15289-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 517787 519085 . - . utg349_pilon exonerate:protein2genome:local exon 517787 519085 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 517787 519085 2095 - . alignment_id 0 ; Query GL50803_15289-t26_1-p1 ; Align 519086 1 1299 utg349_pilon exonerate:protein2genome:local gene 512531 513835 1907 - . gene_id 0 ; sequence GL50803_15290-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 512531 513835 . - . utg349_pilon exonerate:protein2genome:local exon 512531 513835 . - . insertions 6 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 512531 513835 1907 - . alignment_id 0 ; Query GL50803_15290-t26_1-p1 ; Align 513836 1 1020 ; Align 512810 341 279 utg349_pilon exonerate:protein2genome:local gene 492390 493292 1185 - . gene_id 0 ; sequence GL50803_15292-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 492390 493292 . - . utg349_pilon exonerate:protein2genome:local exon 492390 493292 . - . insertions 12 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 492390 493292 1185 - . alignment_id 0 ; Query GL50803_15292-t26_1-p1 ; Align 493293 4 438 ; Align 492843 150 453 utg64_pilon exonerate:protein2genome:local gene 243811 245751 2380 + . gene_id 0 ; sequence GL50803_15295-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 243811 245751 . + . utg64_pilon exonerate:protein2genome:local exon 243811 245751 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 243811 245751 2380 + . alignment_id 0 ; Query GL50803_15295-t26_1-p1 ; Align 243811 1 1941 utg64_pilon exonerate:protein2genome:local gene 237115 238089 1328 + . gene_id 0 ; sequence GL50803_15296-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 237115 238089 . + . utg64_pilon exonerate:protein2genome:local exon 237115 238089 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 237115 238089 1328 + . alignment_id 0 ; Query GL50803_15296-t26_1-p1 ; Align 237115 1 975 utg64_pilon exonerate:protein2genome:local gene 235951 236982 1608 - . gene_id 0 ; sequence GL50803_15297-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 235951 236982 . - . utg64_pilon exonerate:protein2genome:local exon 235951 236982 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 235951 236982 1608 - . alignment_id 0 ; Query GL50803_15297-t26_1-p1 ; Align 236983 1 1032 utg64_pilon exonerate:protein2genome:local gene 444434 588322 3164 - . gene_id 0 ; sequence GL50803_15303-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 588304 588322 . - . utg64_pilon exonerate:protein2genome:local exon 588304 588322 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 588302 588303 . - . intron_id 1 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 446869 588303 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 446869 446870 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 444434 446868 . - . utg64_pilon exonerate:protein2genome:local exon 444434 446868 . - . insertions 3 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 444434 588322 3164 - . alignment_id 0 ; Query GL50803_15303-t26_1-p1 ; Align 588323 3 18 ; Align 446867 10 516 ; Align 446351 185 1119 ; Align 445229 558 516 ; Align 444713 731 279 utg64_pilon exonerate:protein2genome:local gene 438917 443491 6441 + . gene_id 0 ; sequence GL50803_15304-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 438917 443491 . + . utg64_pilon exonerate:protein2genome:local exon 438917 443491 . + . insertions 12 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 438917 443491 6441 + . alignment_id 0 ; Query GL50803_15304-t26_1-p1 ; Align 438917 2 699 ; Align 439628 235 3864 utg64_pilon exonerate:protein2genome:local gene 438241 438909 1066 + . gene_id 0 ; sequence GL50803_15305-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 438241 438909 . + . utg64_pilon exonerate:protein2genome:local exon 438241 438909 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 438241 438909 1066 + . alignment_id 0 ; Query GL50803_15305-t26_1-p1 ; Align 438241 1 669 utg64_pilon exonerate:protein2genome:local gene 416327 420682 5814 + . gene_id 0 ; sequence GL50803_15306-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 416327 420682 . + . utg64_pilon exonerate:protein2genome:local exon 416327 420682 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 416327 420682 5814 + . alignment_id 0 ; Query GL50803_15306-t26_1-p1 ; Align 416327 1 4356 utg64_pilon exonerate:protein2genome:local gene 408921 409445 867 + . gene_id 0 ; sequence GL50803_15307-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 408921 409445 . + . utg64_pilon exonerate:protein2genome:local exon 408921 409445 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 408921 409445 867 + . alignment_id 0 ; Query GL50803_15307-t26_1-p1 ; Align 408921 1 525 utg99_pilon exonerate:protein2genome:local gene 525490 527688 3506 - . gene_id 0 ; sequence GL50803_15310-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 525490 527688 . - . utg99_pilon exonerate:protein2genome:local exon 525490 527688 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 525490 527688 3506 - . alignment_id 0 ; Query GL50803_15310-t26_1-p1 ; Align 527689 1 2199 utg99_pilon exonerate:protein2genome:local gene 523639 524310 944 - . gene_id 0 ; sequence GL50803_15311-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 523639 524310 . - . utg99_pilon exonerate:protein2genome:local exon 523639 524310 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 523639 524310 944 - . alignment_id 0 ; Query GL50803_15311-t26_1-p1 ; Align 524311 1 672 utg99_pilon exonerate:protein2genome:local gene 506954 508003 1318 - . gene_id 0 ; sequence GL50803_15313-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 506954 508003 . - . utg99_pilon exonerate:protein2genome:local exon 506954 508003 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 506954 508003 1318 - . alignment_id 0 ; Query GL50803_15313-t26_1-p1 ; Align 508004 1 1050 utg308_pilon exonerate:protein2genome:local gene 730869 735734 6648 - . gene_id 0 ; sequence GL50803_15317-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 731261 735734 . - . utg308_pilon exonerate:protein2genome:local exon 731261 735734 . - . insertions 6 ; deletions 4 utg308_pilon exonerate:protein2genome:local splice5 731259 731260 . - . intron_id 1 ; splice_site "AT" utg308_pilon exonerate:protein2genome:local intron 731231 731260 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 731231 731232 . - . intron_id 0 ; splice_site "GG" utg308_pilon exonerate:protein2genome:local cds 730869 731230 . - . utg308_pilon exonerate:protein2genome:local exon 730869 731230 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 730869 735734 6648 - . alignment_id 0 ; Query GL50803_15317-t26_1-p1 ; Align 735735 1 774 ; Align 734958 259 2646 ; Align 732312 1145 978 ; Align 731331 1471 69 ; Align 731229 1495 108 ; Align 731121 1532 252 utg349_pilon exonerate:protein2genome:local gene 358200 359279 1720 + . gene_id 0 ; sequence GL50803_15324-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 358200 359279 . + . utg349_pilon exonerate:protein2genome:local exon 358200 359279 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 358200 359279 1720 + . alignment_id 0 ; Query GL50803_15324-t26_1-p1 ; Align 358200 13 1080 utg47_pilon exonerate:protein2genome:local gene 1034517 1035119 760 - . gene_id 0 ; sequence GL50803_15326-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1034517 1035119 . - . utg47_pilon exonerate:protein2genome:local exon 1034517 1035119 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1034517 1035119 760 - . alignment_id 0 ; Query GL50803_15326-t26_1-p1 ; Align 1035120 6 603 utg47_pilon exonerate:protein2genome:local gene 82508 83110 760 - . gene_id 0 ; sequence GL50803_15326-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 82508 83110 . - . utg47_pilon exonerate:protein2genome:local exon 82508 83110 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 82508 83110 760 - . alignment_id 0 ; Query GL50803_15326-t26_1-p1 ; Align 83111 6 603 utg731_pilon exonerate:protein2genome:local gene 1588618 1589220 760 + . gene_id 0 ; sequence GL50803_15326-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1588618 1589220 . + . utg731_pilon exonerate:protein2genome:local exon 1588618 1589220 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1588618 1589220 760 + . alignment_id 0 ; Query GL50803_15326-t26_1-p1 ; Align 1588618 6 603 utg731_pilon exonerate:protein2genome:local gene 1579866 1580468 760 - . gene_id 0 ; sequence GL50803_15326-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1579866 1580468 . - . utg731_pilon exonerate:protein2genome:local exon 1579866 1580468 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1579866 1580468 760 - . alignment_id 0 ; Query GL50803_15326-t26_1-p1 ; Align 1580469 6 603 utg731_pilon exonerate:protein2genome:local gene 813946 817950 4554 - . gene_id 0 ; sequence GL50803_15329-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 815523 817950 . - . utg731_pilon exonerate:protein2genome:local exon 815523 817950 . - . insertions 3 ; deletions 5 utg731_pilon exonerate:protein2genome:local splice5 815521 815522 . - . intron_id 1 ; splice_site "AC" utg731_pilon exonerate:protein2genome:local intron 815460 815522 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 815460 815461 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 813946 815459 . - . utg731_pilon exonerate:protein2genome:local exon 813946 815459 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 813946 817950 4554 - . alignment_id 0 ; Query GL50803_15329-t26_1-p1 ; Align 817951 1 789 ; Align 817159 264 453 ; Align 816706 419 24 ; Align 816682 428 1158 ; Align 815458 815 1512 utg731_pilon exonerate:protein2genome:local gene 831125 833830 3159 + . gene_id 0 ; sequence GL50803_15331-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 831125 833830 . + . utg731_pilon exonerate:protein2genome:local exon 831125 833830 . + . insertions 12 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 831125 833830 3159 + . alignment_id 0 ; Query GL50803_15331-t26_1-p1 ; Align 831125 1 423 ; Align 831554 142 63 ; Align 831617 165 51 ; Align 831668 183 954 ; Align 832625 501 75 ; Align 832700 527 234 ; Align 832937 605 894 utg731_pilon exonerate:protein2genome:local gene 1227610 1232883 7695 + . gene_id 0 ; sequence GL50803_15334-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1227610 1230723 . + . utg731_pilon exonerate:protein2genome:local exon 1227610 1230723 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1230724 1230725 . + . intron_id 1 ; splice_site "GA" utg731_pilon exonerate:protein2genome:local intron 1230724 1230777 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1230776 1230777 . + . intron_id 0 ; splice_site "CG" utg731_pilon exonerate:protein2genome:local cds 1230778 1232883 . + . utg731_pilon exonerate:protein2genome:local exon 1230778 1232883 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1227610 1232883 7695 + . alignment_id 0 ; Query GL50803_15334-t26_1-p1 ; Align 1227610 7 3114 ; Align 1230778 1045 2106 utg47_pilon exonerate:protein2genome:local gene 1246528 1247190 953 - . gene_id 0 ; sequence GL50803_15338-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1246528 1247190 . - . utg47_pilon exonerate:protein2genome:local exon 1246528 1247190 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1246528 1247190 953 - . alignment_id 0 ; Query GL50803_15338-t26_1-p1 ; Align 1247191 1 663 utg47_pilon exonerate:protein2genome:local gene 1247756 1249783 2352 - . gene_id 0 ; sequence GL50803_15339-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1247756 1249783 . - . utg47_pilon exonerate:protein2genome:local exon 1247756 1249783 . - . insertions 15 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1247756 1249783 2352 - . alignment_id 0 ; Query GL50803_15339-t26_1-p1 ; Align 1249784 1 1848 ; Align 1247933 617 33 ; Align 1247900 629 30 ; Align 1247858 639 102 utg47_pilon exonerate:protein2genome:local gene 1251691 1254456 3858 - . gene_id 0 ; sequence GL50803_15340-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1251691 1254456 . - . utg47_pilon exonerate:protein2genome:local exon 1251691 1254456 . - . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 1251691 1254456 3858 - . alignment_id 0 ; Query GL50803_15340-t26_1-p1 ; Align 1254457 1 1194 ; Align 1253263 403 834 ; Align 1252429 682 738 utg47_pilon exonerate:protein2genome:local gene 1260259 1261698 2034 - . gene_id 0 ; sequence GL50803_15342-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1260456 1261698 . - . utg47_pilon exonerate:protein2genome:local exon 1260456 1261698 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1260454 1260455 . - . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1260423 1260455 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1260423 1260424 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1260259 1260422 . - . utg47_pilon exonerate:protein2genome:local exon 1260259 1260422 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1260259 1261698 2034 - . alignment_id 0 ; Query GL50803_15342-t26_1-p1 ; Align 1261699 1 1242 ; Align 1260421 416 60 ; Align 1260361 437 102 utg47_pilon exonerate:protein2genome:local gene 1262750 1264030 1824 + . gene_id 0 ; sequence GL50803_15343-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1262750 1264030 . + . utg47_pilon exonerate:protein2genome:local exon 1262750 1264030 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1262750 1264030 1824 + . alignment_id 0 ; Query GL50803_15343-t26_1-p1 ; Align 1262750 1 1281 utg47_pilon exonerate:protein2genome:local gene 1267785 1271009 5135 + . gene_id 0 ; sequence GL50803_15344-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1267785 1271009 . + . utg47_pilon exonerate:protein2genome:local exon 1267785 1271009 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1267785 1271009 5135 + . alignment_id 0 ; Query GL50803_15344-t26_1-p1 ; Align 1267785 1 3225 utg11_pilon exonerate:protein2genome:local gene 852468 855518 4053 - . gene_id 0 ; sequence GL50803_15347-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 852468 855518 . - . utg11_pilon exonerate:protein2genome:local exon 852468 855518 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 852468 855518 4053 - . alignment_id 0 ; Query GL50803_15347-t26_1-p1 ; Align 855519 1 3051 utg308_pilon exonerate:protein2genome:local gene 852547 854106 2342 - . gene_id 0 ; sequence GL50803_15353-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 852547 854106 . - . utg308_pilon exonerate:protein2genome:local exon 852547 854106 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 852547 854106 2342 - . alignment_id 0 ; Query GL50803_15353-t26_1-p1 ; Align 854107 1 1560 utg265_pilon exonerate:protein2genome:local gene 1004884 1009218 7214 - . gene_id 0 ; sequence GL50803_15364-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1004884 1009218 . - . utg265_pilon exonerate:protein2genome:local exon 1004884 1009218 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1004884 1009218 7214 - . alignment_id 0 ; Query GL50803_15364-t26_1-p1 ; Align 1009219 1 4335 utg265_pilon exonerate:protein2genome:local gene 426422 427010 600 + . gene_id 0 ; sequence GL50803_15367-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 426422 427010 . + . utg265_pilon exonerate:protein2genome:local exon 426422 427010 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 426422 427010 600 + . alignment_id 0 ; Query GL50803_15367-t26_1-p1 ; Align 426422 1 225 ; Align 426648 76 363 utg265_pilon exonerate:protein2genome:local gene 427061 428578 2290 - . gene_id 0 ; sequence GL50803_15368-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 427061 428578 . - . utg265_pilon exonerate:protein2genome:local exon 427061 428578 . - . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 427061 428578 2290 - . alignment_id 0 ; Query GL50803_15368-t26_1-p1 ; Align 428579 1 327 ; Align 428252 112 168 ; Align 428084 169 1023 utg265_pilon exonerate:protein2genome:local gene 430127 430759 788 - . gene_id 0 ; sequence GL50803_15369-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 430127 430759 . - . utg265_pilon exonerate:protein2genome:local exon 430127 430759 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 430127 430759 788 - . alignment_id 0 ; Query GL50803_15369-t26_1-p1 ; Align 430760 1 633 utg265_pilon exonerate:protein2genome:local gene 264732 464136 10211 + . gene_id 0 ; sequence GL50803_15376-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 264732 264771 . + . utg265_pilon exonerate:protein2genome:local exon 264732 264771 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 264772 264773 . + . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 264772 406163 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 406162 406163 . + . intron_id 0 ; splice_site "TG" utg265_pilon exonerate:protein2genome:local cds 406164 406255 . + . utg265_pilon exonerate:protein2genome:local exon 406164 406255 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 406256 406257 . + . intron_id 2 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 406256 456356 . + . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 456355 456356 . + . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 456357 464136 . + . utg265_pilon exonerate:protein2genome:local exon 456357 464136 . + . insertions 0 ; deletions 3 ; frameshifts 4 utg265_pilon exonerate:protein2genome:local similarity 264732 464136 10211 + . alignment_id 0 ; Query GL50803_15376-t26_1-p1 ; Align 264732 270 39 ; Align 406166 284 90 ; Align 456357 314 3357 ; Align 459715 1433 1338 ; Align 461053 1880 6 ; Align 461060 1882 1266 ; Align 462326 2305 726 ; Align 463054 2548 1083 utg265_pilon exonerate:protein2genome:local gene 464137 466416 2982 - . gene_id 0 ; sequence GL50803_15377-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 465396 466416 . - . utg265_pilon exonerate:protein2genome:local exon 465396 466416 . - . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local splice5 465394 465395 . - . intron_id 1 ; splice_site "AT" utg265_pilon exonerate:protein2genome:local intron 465366 465395 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 465366 465367 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 464849 465365 . - . utg265_pilon exonerate:protein2genome:local exon 464849 465365 . - . insertions 0 ; deletions 5 utg265_pilon exonerate:protein2genome:local splice5 464847 464848 . - . intron_id 2 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 464816 464848 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 464816 464817 . - . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 464137 464815 . - . utg265_pilon exonerate:protein2genome:local exon 464137 464815 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 464137 466416 2982 - . alignment_id 0 ; Query GL50803_15377-t26_1-p1 ; Align 466417 1 441 ; Align 465976 151 579 ; Align 465364 345 12 ; Align 465352 351 132 ; Align 465220 396 198 ; Align 465022 464 171 ; Align 464815 522 678 utg308_pilon exonerate:protein2genome:local gene 922153 922908 912 + . gene_id 0 ; sequence GL50803_15380-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 922153 922908 . + . utg308_pilon exonerate:protein2genome:local exon 922153 922908 . + . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 922153 922908 912 + . alignment_id 0 ; Query GL50803_15380-t26_1-p1 ; Align 922153 4 48 ; Align 922204 20 705 utg308_pilon exonerate:protein2genome:local gene 908512 911892 4656 + . gene_id 0 ; sequence GL50803_15382-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 908512 911892 . + . utg308_pilon exonerate:protein2genome:local exon 908512 911892 . + . insertions 3 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 908512 911892 4656 + . alignment_id 0 ; Query GL50803_15382-t26_1-p1 ; Align 908512 1 2514 ; Align 911029 839 24 ; Align 911053 848 840 utg308_pilon exonerate:protein2genome:local gene 907591 908328 1259 - . gene_id 0 ; sequence GL50803_15383-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 907591 908328 . - . utg308_pilon exonerate:protein2genome:local exon 907591 908328 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 907591 908328 1259 - . alignment_id 0 ; Query GL50803_15383-t26_1-p1 ; Align 908329 1 738 utg11_pilon exonerate:protein2genome:local gene 308203 308700 678 - . gene_id 0 ; sequence GL50803_15386-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 308203 308700 . - . utg11_pilon exonerate:protein2genome:local exon 308203 308700 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 308203 308700 678 - . alignment_id 0 ; Query GL50803_15386-t26_1-p1 ; Align 308701 1 498 utg11_pilon exonerate:protein2genome:local gene 353191 355848 3359 - . gene_id 0 ; sequence GL50803_15392-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 353191 355848 . - . utg11_pilon exonerate:protein2genome:local exon 353191 355848 . - . insertions 3 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 353191 355848 3359 - . alignment_id 0 ; Query GL50803_15392-t26_1-p1 ; Align 355849 1 288 ; Align 355561 98 156 ; Align 355405 151 552 ; Align 354853 338 1626 ; Align 353224 880 33 utg349_pilon exonerate:protein2genome:local gene 1400735 1406389 6509 - . gene_id 0 ; sequence GL50803_15395-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1405483 1406389 . - . utg349_pilon exonerate:protein2genome:local exon 1405483 1406389 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1405481 1405482 . - . intron_id 1 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local intron 1405453 1405482 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1405453 1405454 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1400735 1405452 . - . utg349_pilon exonerate:protein2genome:local exon 1400735 1405452 . - . insertions 21 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1400735 1406389 6509 - . alignment_id 0 ; Query GL50803_15395-t26_1-p1 ; Align 1406390 1 906 ; Align 1405451 304 1365 ; Align 1404080 759 66 ; Align 1404008 781 849 ; Align 1403156 1064 1251 ; Align 1401902 1481 564 ; Align 1401335 1669 600 utg349_pilon exonerate:protein2genome:local gene 1397637 1398656 1671 + . gene_id 0 ; sequence GL50803_15397-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1397637 1398656 . + . utg349_pilon exonerate:protein2genome:local exon 1397637 1398656 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1397637 1398656 1671 + . alignment_id 0 ; Query GL50803_15397-t26_1-p1 ; Align 1397637 1 1020 utg349_pilon exonerate:protein2genome:local gene 1391532 1392614 1860 - . gene_id 0 ; sequence GL50803_15398-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1391532 1392614 . - . utg349_pilon exonerate:protein2genome:local exon 1391532 1392614 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1391532 1392614 1860 - . alignment_id 0 ; Query GL50803_15398-t26_1-p1 ; Align 1392615 1 1083 utg349_pilon exonerate:protein2genome:local gene 1388540 1391491 3607 + . gene_id 0 ; sequence GL50803_15399-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1388540 1391491 . + . utg349_pilon exonerate:protein2genome:local exon 1388540 1391491 . + . insertions 12 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 1388540 1391491 3607 + . alignment_id 0 ; Query GL50803_15399-t26_1-p1 ; Align 1388540 1 1389 ; Align 1389935 464 510 ; Align 1390451 634 207 ; Align 1390658 705 423 ; Align 1391081 847 411 utg47_pilon exonerate:protein2genome:local gene 1745191 1746529 590 - . gene_id 0 ; sequence GL50803_15400-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1746333 1746529 . - . utg47_pilon exonerate:protein2genome:local exon 1746333 1746529 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1746331 1746332 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1745615 1746332 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1745615 1745616 . - . intron_id 0 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1745191 1745614 . - . utg47_pilon exonerate:protein2genome:local exon 1745191 1745614 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1745191 1746529 590 - . alignment_id 0 ; Query GL50803_15400-t26_1-p1 ; Align 1746530 23 195 ; Align 1745614 89 306 ; Align 1745305 191 114 utg349_pilon exonerate:protein2genome:local gene 1352662 1355820 3698 + . gene_id 0 ; sequence GL50803_15404-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1352662 1355820 . + . utg349_pilon exonerate:protein2genome:local exon 1352662 1355820 . + . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 1352662 1355820 3698 + . alignment_id 0 ; Query GL50803_15404-t26_1-p1 ; Align 1352662 1 516 ; Align 1353178 175 2574 ; Align 1355752 1034 69 utg11_pilon exonerate:protein2genome:local gene 1664489 1667284 3229 - . gene_id 0 ; sequence GL50803_15406-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1666627 1667284 . - . utg11_pilon exonerate:protein2genome:local exon 1666627 1667284 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1666625 1666626 . - . intron_id 1 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local intron 1666567 1666626 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1666567 1666568 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1664489 1666566 . - . utg11_pilon exonerate:protein2genome:local exon 1664489 1666566 . - . insertions 0 ; deletions 9 utg11_pilon exonerate:protein2genome:local similarity 1664489 1667284 3229 - . alignment_id 0 ; Query GL50803_15406-t26_1-p1 ; Align 1667285 105 657 ; Align 1666565 325 54 ; Align 1666511 344 342 ; Align 1666169 461 1110 ; Align 1665059 832 399 ; Align 1664660 966 15 ; Align 1664645 974 156 utg349_pilon exonerate:protein2genome:local gene 190026 191571 2217 + . gene_id 0 ; sequence GL50803_15409-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 190026 191571 . + . utg349_pilon exonerate:protein2genome:local exon 190026 191571 . + . insertions 3 ; deletions 1 ; frameshifts 4 utg349_pilon exonerate:protein2genome:local similarity 190026 191571 2217 + . alignment_id 0 ; Query GL50803_15409-t26_1-p1 ; Align 190026 1 774 ; Align 190801 259 75 ; Align 190878 285 78 ; Align 190959 311 174 ; Align 191134 369 438 utg349_pilon exonerate:protein2genome:local gene 189039 189906 1156 + . gene_id 0 ; sequence GL50803_15410-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 189039 189906 . + . utg349_pilon exonerate:protein2genome:local exon 189039 189906 . + . insertions 12 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 189039 189906 1156 + . alignment_id 0 ; Query GL50803_15410-t26_1-p1 ; Align 189039 1 69 ; Align 189109 24 90 ; Align 189211 54 696 utg349_pilon exonerate:protein2genome:local gene 186930 189063 3070 + . gene_id 0 ; sequence GL50803_15411-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 186930 189063 . + . utg349_pilon exonerate:protein2genome:local exon 186930 189063 . + . insertions 18 ; deletions 2 ; frameshifts 4 utg349_pilon exonerate:protein2genome:local similarity 186930 189063 3070 + . alignment_id 0 ; Query GL50803_15411-t26_1-p1 ; Align 186930 1 537 ; Align 187469 180 3 ; Align 187472 182 384 ; Align 187858 311 207 ; Align 188077 380 15 ; Align 188095 385 174 ; Align 188272 443 792 utg349_pilon exonerate:protein2genome:local gene 184849 186813 2361 + . gene_id 0 ; sequence GL50803_15412-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 184849 186813 . + . utg349_pilon exonerate:protein2genome:local exon 184849 186813 . + . insertions 0 ; deletions 3 ; frameshifts 3 utg349_pilon exonerate:protein2genome:local similarity 184849 186813 2361 + . alignment_id 0 ; Query GL50803_15412-t26_1-p1 ; Align 184849 8 627 ; Align 185478 218 183 ; Align 185662 280 1008 ; Align 186670 617 144 utg349_pilon exonerate:protein2genome:local gene 184178 184726 913 + . gene_id 0 ; sequence GL50803_15413-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 184178 184726 . + . utg349_pilon exonerate:protein2genome:local exon 184178 184726 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 184178 184726 913 + . alignment_id 0 ; Query GL50803_15413-t26_1-p1 ; Align 184178 24 549 utg47_pilon exonerate:protein2genome:local gene 1524641 1527052 2434 + . gene_id 0 ; sequence GL50803_15416-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1524641 1525760 . + . utg47_pilon exonerate:protein2genome:local exon 1524641 1525760 . + . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 1525761 1525762 . + . intron_id 1 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 1525761 1525808 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1525807 1525808 . + . intron_id 0 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local cds 1525809 1527052 . + . utg47_pilon exonerate:protein2genome:local exon 1525809 1527052 . + . insertions 0 ; deletions 7 utg47_pilon exonerate:protein2genome:local similarity 1524641 1527052 2434 + . alignment_id 0 ; Query GL50803_15416-t26_1-p1 ; Align 1524641 256 276 ; Align 1524917 350 801 ; Align 1525718 618 42 ; Align 1525811 633 192 ; Align 1526003 698 186 ; Align 1526189 761 63 ; Align 1526252 783 447 ; Align 1526699 933 297 ; Align 1526996 1035 57 utg47_pilon exonerate:protein2genome:local gene 1513299 1514780 2106 - . gene_id 0 ; sequence GL50803_15418-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1513299 1514780 . - . utg47_pilon exonerate:protein2genome:local exon 1513299 1514780 . - . insertions 0 ; deletions 2 ; frameshifts 3 utg47_pilon exonerate:protein2genome:local similarity 1513299 1514780 2106 - . alignment_id 0 ; Query GL50803_15418-t26_1-p1 ; Align 1514781 1 216 ; Align 1514563 74 945 ; Align 1513617 390 318 utg47_pilon exonerate:protein2genome:local gene 1506277 1508250 1901 + . gene_id 0 ; sequence GL50803_15419-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1506277 1508250 . + . utg47_pilon exonerate:protein2genome:local exon 1506277 1508250 . + . insertions 15 ; deletions 7 utg47_pilon exonerate:protein2genome:local similarity 1506277 1508250 1901 + . alignment_id 0 ; Query GL50803_15419-t26_1-p1 ; Align 1506277 19 546 ; Align 1506823 203 9 ; Align 1506832 207 300 ; Align 1507132 308 39 ; Align 1507171 324 402 ; Align 1507588 458 663 utg731_pilon exonerate:protein2genome:local gene 1042251 1042934 1124 + . gene_id 0 ; sequence GL50803_15427-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1042251 1042934 . + . utg731_pilon exonerate:protein2genome:local exon 1042251 1042934 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1042251 1042934 1124 + . alignment_id 0 ; Query GL50803_15427-t26_1-p1 ; Align 1042251 9 684 utg731_pilon exonerate:protein2genome:local gene 1040125 1042140 3058 + . gene_id 0 ; sequence GL50803_15428-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1040125 1042140 . + . utg731_pilon exonerate:protein2genome:local exon 1040125 1042140 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1040125 1042140 3058 + . alignment_id 0 ; Query GL50803_15428-t26_1-p1 ; Align 1040125 1 2016 utg731_pilon exonerate:protein2genome:local gene 1036688 1038046 1584 + . gene_id 0 ; sequence GL50803_15429-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1036688 1038046 . + . utg731_pilon exonerate:protein2genome:local exon 1036688 1038046 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1036688 1038046 1584 + . alignment_id 0 ; Query GL50803_15429-t26_1-p1 ; Align 1036688 1 1359 utg731_pilon exonerate:protein2genome:local gene 1032995 1034785 2744 - . gene_id 0 ; sequence GL50803_15432-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1032995 1034785 . - . utg731_pilon exonerate:protein2genome:local exon 1032995 1034785 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1032995 1034785 2744 - . alignment_id 0 ; Query GL50803_15432-t26_1-p1 ; Align 1034786 1 1791 utg731_pilon exonerate:protein2genome:local gene 1009957 1010739 1236 + . gene_id 0 ; sequence GL50803_15436-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1009957 1010739 . + . utg731_pilon exonerate:protein2genome:local exon 1009957 1010739 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1009957 1010739 1236 + . alignment_id 0 ; Query GL50803_15436-t26_1-p1 ; Align 1009957 1 783 utg308_pilon exonerate:protein2genome:local gene 282381 285221 4037 - . gene_id 0 ; sequence GL50803_15442-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 282381 285221 . - . utg308_pilon exonerate:protein2genome:local exon 282381 285221 . - . insertions 6 ; deletions 4 utg308_pilon exonerate:protein2genome:local similarity 282381 285221 4037 - . alignment_id 0 ; Query GL50803_15442-t26_1-p1 ; Align 285222 1 834 ; Align 284382 279 1071 ; Align 283311 640 930 utg308_pilon exonerate:protein2genome:local gene 279633 280616 907 - . gene_id 0 ; sequence GL50803_15444-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 280466 280616 . - . utg308_pilon exonerate:protein2genome:local exon 280466 280616 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 280464 280465 . - . intron_id 1 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 280421 280465 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 280421 280422 . - . intron_id 0 ; splice_site "CG" utg308_pilon exonerate:protein2genome:local cds 279633 280420 . - . utg308_pilon exonerate:protein2genome:local exon 279633 280420 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 279633 280616 907 - . alignment_id 0 ; Query GL50803_15444-t26_1-p1 ; Align 280617 1 150 ; Align 280419 52 786 utg308_pilon exonerate:protein2genome:local gene 276742 277599 1456 - . gene_id 0 ; sequence GL50803_15445-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 276742 277599 . - . utg308_pilon exonerate:protein2genome:local exon 276742 277599 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 276742 277599 1456 - . alignment_id 0 ; Query GL50803_15445-t26_1-p1 ; Align 277600 1 858 utg308_pilon exonerate:protein2genome:local gene 275626 276642 1672 - . gene_id 0 ; sequence GL50803_15446-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 275626 276642 . - . utg308_pilon exonerate:protein2genome:local exon 275626 276642 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 275626 276642 1672 - . alignment_id 0 ; Query GL50803_15446-t26_1-p1 ; Align 276643 1 360 ; Align 276280 121 654 utg308_pilon exonerate:protein2genome:local gene 264669 267438 3959 - . gene_id 0 ; sequence GL50803_15450-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 264669 267438 . - . utg308_pilon exonerate:protein2genome:local exon 264669 267438 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 264669 267438 3959 - . alignment_id 0 ; Query GL50803_15450-t26_1-p1 ; Align 267439 1 2640 ; Align 264798 881 129 utg308_pilon exonerate:protein2genome:local gene 257788 264540 7692 - . gene_id 0 ; sequence GL50803_15451-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 257788 264540 . - . utg308_pilon exonerate:protein2genome:local exon 257788 264540 . - . insertions 30 ; deletions 5 utg308_pilon exonerate:protein2genome:local similarity 257788 264540 7692 - . alignment_id 0 ; Query GL50803_15451-t26_1-p1 ; Align 264541 1 1626 ; Align 262912 543 126 ; Align 262783 585 636 ; Align 262147 799 807 ; Align 261340 1070 435 ; Align 260896 1215 285 ; Align 260608 1310 1131 ; Align 259465 1687 834 ; Align 258631 1966 843 utg308_pilon exonerate:protein2genome:local gene 250555 251988 1687 + . gene_id 0 ; sequence GL50803_15454-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 250555 251988 . + . utg308_pilon exonerate:protein2genome:local exon 250555 251988 . + . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 250555 251988 1687 + . alignment_id 0 ; Query GL50803_15454-t26_1-p1 ; Align 250555 1 537 ; Align 251092 181 426 ; Align 251518 324 471 utg308_pilon exonerate:protein2genome:local gene 248752 249462 1235 + . gene_id 0 ; sequence GL50803_15455-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 248752 249462 . + . utg308_pilon exonerate:protein2genome:local exon 248752 249462 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 248752 249462 1235 + . alignment_id 0 ; Query GL50803_15455-t26_1-p1 ; Align 248752 1 711 utg308_pilon exonerate:protein2genome:local gene 246206 248635 3143 + . gene_id 0 ; sequence GL50803_15456-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 246206 248635 . + . utg308_pilon exonerate:protein2genome:local exon 246206 248635 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 246206 248635 3143 + . alignment_id 0 ; Query GL50803_15456-t26_1-p1 ; Align 246206 1 2430 utg18_pilon exonerate:protein2genome:local gene 413007 414407 1360 - . gene_id 0 ; sequence GL50803_15460-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 413007 414407 . - . utg18_pilon exonerate:protein2genome:local exon 413007 414407 . - . insertions 6 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 413007 414407 1360 - . alignment_id 0 ; Query GL50803_15460-t26_1-p1 ; Align 414408 1 711 ; Align 413697 239 306 ; Align 413391 342 132 ; Align 413253 386 246 utg18_pilon exonerate:protein2genome:local gene 420689 421357 1007 + . gene_id 0 ; sequence GL50803_15461-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 420689 421357 . + . utg18_pilon exonerate:protein2genome:local exon 420689 421357 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 420689 421357 1007 + . alignment_id 0 ; Query GL50803_15461-t26_1-p1 ; Align 420689 1 669 utg18_pilon exonerate:protein2genome:local gene 427808 429433 2136 - . gene_id 0 ; sequence GL50803_15464-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 427808 429433 . - . utg18_pilon exonerate:protein2genome:local exon 427808 429433 . - . insertions 6 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 427808 429433 2136 - . alignment_id 0 ; Query GL50803_15464-t26_1-p1 ; Align 429434 1 717 ; Align 428717 241 504 ; Align 428207 409 399 utg265_pilon exonerate:protein2genome:local gene 987987 989690 2373 - . gene_id 0 ; sequence GL50803_15469-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 987987 989690 . - . utg265_pilon exonerate:protein2genome:local exon 987987 989690 . - . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 987987 989690 2373 - . alignment_id 0 ; Query GL50803_15469-t26_1-p1 ; Align 989691 3 1122 ; Align 988566 377 579 utg265_pilon exonerate:protein2genome:local gene 979990 980523 789 - . gene_id 0 ; sequence GL50803_15472-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 979990 980523 . - . utg265_pilon exonerate:protein2genome:local exon 979990 980523 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 979990 980523 789 - . alignment_id 0 ; Query GL50803_15472-t26_1-p1 ; Align 980524 1 534 utg265_pilon exonerate:protein2genome:local gene 976572 979826 4338 + . gene_id 0 ; sequence GL50803_15473-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 976572 979826 . + . utg265_pilon exonerate:protein2genome:local exon 976572 979826 . + . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 976572 979826 4338 + . alignment_id 0 ; Query GL50803_15473-t26_1-p1 ; Align 976572 8 198 ; Align 976770 75 3057 utg265_pilon exonerate:protein2genome:local gene 976104 976556 718 - . gene_id 0 ; sequence GL50803_15474-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 976104 976556 . - . utg265_pilon exonerate:protein2genome:local exon 976104 976556 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 976104 976556 718 - . alignment_id 0 ; Query GL50803_15474-t26_1-p1 ; Align 976557 1 453 utg265_pilon exonerate:protein2genome:local gene 970597 972282 2151 + . gene_id 0 ; sequence GL50803_15475-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 970597 972282 . + . utg265_pilon exonerate:protein2genome:local exon 970597 972282 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 970597 972282 2151 + . alignment_id 0 ; Query GL50803_15475-t26_1-p1 ; Align 970597 6 1686 utg265_pilon exonerate:protein2genome:local gene 967425 970442 4088 + . gene_id 0 ; sequence GL50803_15476-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 967425 970442 . + . utg265_pilon exonerate:protein2genome:local exon 967425 970442 . + . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 967425 970442 4088 + . alignment_id 0 ; Query GL50803_15476-t26_1-p1 ; Align 967425 1 1203 ; Align 968628 403 1815 utg265_pilon exonerate:protein2genome:local gene 966604 967386 1268 - . gene_id 0 ; sequence GL50803_15477-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 966604 967386 . - . utg265_pilon exonerate:protein2genome:local exon 966604 967386 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 966604 967386 1268 - . alignment_id 0 ; Query GL50803_15477-t26_1-p1 ; Align 967387 1 783 utg265_pilon exonerate:protein2genome:local gene 961773 965963 5346 + . gene_id 0 ; sequence GL50803_15478-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 961773 962901 . + . utg265_pilon exonerate:protein2genome:local exon 961773 962901 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 962902 962903 . + . intron_id 1 ; splice_site "TA" utg265_pilon exonerate:protein2genome:local intron 962902 962931 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 962930 962931 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 962932 965963 . + . utg265_pilon exonerate:protein2genome:local exon 962932 965963 . + . insertions 9 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 961773 965963 5346 + . alignment_id 0 ; Query GL50803_15478-t26_1-p1 ; Align 961773 1233 1128 ; Align 962934 1610 372 ; Align 963315 1734 2649 utg265_pilon exonerate:protein2genome:local gene 952728 953828 1283 + . gene_id 0 ; sequence GL50803_15479-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 952728 953828 . + . utg265_pilon exonerate:protein2genome:local exon 952728 953828 . + . insertions 0 ; deletions 1 ; frameshifts 3 utg265_pilon exonerate:protein2genome:local similarity 952728 953828 1283 + . alignment_id 0 ; Query GL50803_15479-t26_1-p1 ; Align 952728 2 231 ; Align 952960 79 399 ; Align 953360 212 162 ; Align 953523 266 123 ; Align 953646 308 183 utg349_pilon exonerate:protein2genome:local gene 898876 903567 6032 - . gene_id 0 ; sequence GL50803_15482-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 898876 903567 . - . utg349_pilon exonerate:protein2genome:local exon 898876 903567 . - . insertions 6 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 898876 903567 6032 - . alignment_id 0 ; Query GL50803_15482-t26_1-p1 ; Align 903568 1 822 ; Align 902746 276 51 ; Align 902695 294 471 ; Align 902224 453 360 ; Align 901864 574 1485 ; Align 900376 1069 198 ; Align 900178 1136 1017 ; Align 899158 1475 282 utg349_pilon exonerate:protein2genome:local gene 912762 913934 1691 - . gene_id 0 ; sequence GL50803_15483-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 912762 913934 . - . utg349_pilon exonerate:protein2genome:local exon 912762 913934 . - . insertions 12 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 912762 913934 1691 - . alignment_id 0 ; Query GL50803_15483-t26_1-p1 ; Align 913935 1 255 ; Align 913668 86 906 utg349_pilon exonerate:protein2genome:local gene 919039 939225 26974 - . gene_id 0 ; sequence GL50803_15485-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 919039 939225 . - . utg349_pilon exonerate:protein2genome:local exon 919039 939225 . - . insertions 30 ; deletions 20 utg349_pilon exonerate:protein2genome:local similarity 919039 939225 26974 - . alignment_id 0 ; Query GL50803_15485-t26_1-p1 ; Align 939226 1 75 ; Align 939151 30 909 ; Align 938242 334 12 ; Align 938230 339 2211 ; Align 936019 1078 36 ; Align 935983 1093 633 ; Align 935347 1304 63 ; Align 935272 1325 675 ; Align 934597 1551 1095 ; Align 933499 1916 4578 ; Align 928915 3442 129 ; Align 928786 3486 2184 ; Align 926602 4215 693 ; Align 925906 4446 327 ; Align 925576 4555 699 ; Align 924877 4789 867 ; Align 924010 5079 1107 ; Align 922903 5449 3621 ; Align 919282 6659 243 utg349_pilon exonerate:protein2genome:local gene 944467 947346 4255 - . gene_id 0 ; sequence GL50803_15487-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 944467 947346 . - . utg349_pilon exonerate:protein2genome:local exon 944467 947346 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 944467 947346 4255 - . alignment_id 0 ; Query GL50803_15487-t26_1-p1 ; Align 947347 1 2880 utg349_pilon exonerate:protein2genome:local gene 1275781 1276433 857 + . gene_id 0 ; sequence GL50803_15490-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1275781 1276433 . + . utg349_pilon exonerate:protein2genome:local exon 1275781 1276433 . + . insertions 3 ; deletions 0 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 1275781 1276433 857 + . alignment_id 0 ; Query GL50803_15490-t26_1-p1 ; Align 1275781 5 39 ; Align 1275823 18 45 ; Align 1275870 33 564 utg349_pilon exonerate:protein2genome:local gene 1283995 1286604 3603 - . gene_id 0 ; sequence GL50803_15495-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1283995 1286604 . - . utg349_pilon exonerate:protein2genome:local exon 1283995 1286604 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1283995 1286604 3603 - . alignment_id 0 ; Query GL50803_15495-t26_1-p1 ; Align 1286605 1 2571 ; Align 1284034 859 39 utg349_pilon exonerate:protein2genome:local gene 1287249 1288337 904 + . gene_id 0 ; sequence GL50803_15496-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1287249 1288337 . + . utg349_pilon exonerate:protein2genome:local exon 1287249 1288337 . + . insertions 0 ; deletions 7 utg349_pilon exonerate:protein2genome:local similarity 1287249 1288337 904 + . alignment_id 0 ; Query GL50803_15496-t26_1-p1 ; Align 1287249 1 72 ; Align 1287321 29 48 ; Align 1287369 47 780 ; Align 1288149 308 189 utg349_pilon exonerate:protein2genome:local gene 1290354 1291316 638 - . gene_id 0 ; sequence GL50803_15497-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1290354 1291316 . - . utg349_pilon exonerate:protein2genome:local exon 1290354 1291316 . - . insertions 6 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1290354 1291316 638 - . alignment_id 0 ; Query GL50803_15497-t26_1-p1 ; Align 1291317 1 345 ; Align 1290972 117 450 ; Align 1290519 267 108 ; Align 1290408 303 54 utg349_pilon exonerate:protein2genome:local gene 1299695 1300987 2033 - . gene_id 0 ; sequence GL50803_15499-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1299695 1300987 . - . utg349_pilon exonerate:protein2genome:local exon 1299695 1300987 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1299695 1300987 2033 - . alignment_id 0 ; Query GL50803_15499-t26_1-p1 ; Align 1300988 1 1293 utg349_pilon exonerate:protein2genome:local gene 1301078 1301497 623 + . gene_id 0 ; sequence GL50803_15500-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1301078 1301497 . + . utg349_pilon exonerate:protein2genome:local exon 1301078 1301497 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1301078 1301497 623 + . alignment_id 0 ; Query GL50803_15500-t26_1-p1 ; Align 1301078 3 420 utg349_pilon exonerate:protein2genome:local gene 1308743 1309849 1613 + . gene_id 0 ; sequence GL50803_15501-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1308743 1309849 . + . utg349_pilon exonerate:protein2genome:local exon 1308743 1309849 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1308743 1309849 1613 + . alignment_id 0 ; Query GL50803_15501-t26_1-p1 ; Align 1308743 1 1107 utg731_pilon exonerate:protein2genome:local gene 865376 867061 2707 - . gene_id 0 ; sequence GL50803_15513-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 865376 867061 . - . utg731_pilon exonerate:protein2genome:local exon 865376 867061 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 865376 867061 2707 - . alignment_id 0 ; Query GL50803_15513-t26_1-p1 ; Align 867062 1 1686 utg731_pilon exonerate:protein2genome:local gene 871857 873201 2062 + . gene_id 0 ; sequence GL50803_15514-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 871857 873201 . + . utg731_pilon exonerate:protein2genome:local exon 871857 873201 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 871857 873201 2062 + . alignment_id 0 ; Query GL50803_15514-t26_1-p1 ; Align 871857 80 303 ; Align 872161 181 1041 utg731_pilon exonerate:protein2genome:local gene 873267 876152 3807 + . gene_id 0 ; sequence GL50803_15515-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 873267 876152 . + . utg731_pilon exonerate:protein2genome:local exon 873267 876152 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 873267 876152 3807 + . alignment_id 0 ; Query GL50803_15515-t26_1-p1 ; Align 873267 1 2886 utg731_pilon exonerate:protein2genome:local gene 885449 885925 834 - . gene_id 0 ; sequence GL50803_15520-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 885449 885925 . - . utg731_pilon exonerate:protein2genome:local exon 885449 885925 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 885449 885925 834 - . alignment_id 0 ; Query GL50803_15520-t26_1-p1 ; Align 885926 1 477 utg731_pilon exonerate:protein2genome:local gene 892682 894295 2133 + . gene_id 0 ; sequence GL50803_15521-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 892682 894295 . + . utg731_pilon exonerate:protein2genome:local exon 892682 894295 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 892682 894295 2133 + . alignment_id 0 ; Query GL50803_15521-t26_1-p1 ; Align 892682 1 1614 utg731_pilon exonerate:protein2genome:local gene 903596 905797 3008 - . gene_id 0 ; sequence GL50803_15522-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 903596 905797 . - . utg731_pilon exonerate:protein2genome:local exon 903596 905797 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 903596 905797 3008 - . alignment_id 0 ; Query GL50803_15522-t26_1-p1 ; Align 905798 1 1302 ; Align 904493 435 897 utg731_pilon exonerate:protein2genome:local gene 921389 921799 671 + . gene_id 0 ; sequence GL50803_15525-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 921389 921799 . + . utg731_pilon exonerate:protein2genome:local exon 921389 921799 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 921389 921799 671 + . alignment_id 0 ; Query GL50803_15525-t26_1-p1 ; Align 921389 1 411 utg11_pilon exonerate:protein2genome:local gene 924832 925779 971 - . gene_id 0 ; sequence GL50803_15529-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 924832 925779 . - . utg11_pilon exonerate:protein2genome:local exon 924832 925779 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 924832 925779 971 - . alignment_id 0 ; Query GL50803_15529-t26_1-p1 ; Align 925780 1 426 ; Align 925351 143 519 utg11_pilon exonerate:protein2genome:local gene 924169 924783 848 + . gene_id 0 ; sequence GL50803_15530-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 924169 924783 . + . utg11_pilon exonerate:protein2genome:local exon 924169 924783 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 924169 924783 848 + . alignment_id 0 ; Query GL50803_15530-t26_1-p1 ; Align 924169 1 615 utg11_pilon exonerate:protein2genome:local gene 928801 930252 2214 - . gene_id 0 ; sequence GL50803_15531-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 928801 930252 . - . utg11_pilon exonerate:protein2genome:local exon 928801 930252 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 928801 930252 2214 - . alignment_id 0 ; Query GL50803_15531-t26_1-p1 ; Align 930253 21 1452 utg11_pilon exonerate:protein2genome:local gene 934121 934774 982 - . gene_id 0 ; sequence GL50803_15532-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 934121 934774 . - . utg11_pilon exonerate:protein2genome:local exon 934121 934774 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 934121 934774 982 - . alignment_id 0 ; Query GL50803_15532-t26_1-p1 ; Align 934775 1 654 utg11_pilon exonerate:protein2genome:local gene 947688 948851 1969 - . gene_id 0 ; sequence GL50803_15535-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 947688 948851 . - . utg11_pilon exonerate:protein2genome:local exon 947688 948851 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 947688 948851 1969 - . alignment_id 0 ; Query GL50803_15535-t26_1-p1 ; Align 948852 1 1164 utg11_pilon exonerate:protein2genome:local gene 950714 951736 1122 + . gene_id 0 ; sequence GL50803_15537-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 950714 951736 . + . utg11_pilon exonerate:protein2genome:local exon 950714 951736 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 950714 951736 1122 + . alignment_id 0 ; Query GL50803_15537-t26_1-p1 ; Align 950714 10 684 ; Align 951398 239 339 utg11_pilon exonerate:protein2genome:local gene 952381 953391 1650 - . gene_id 0 ; sequence GL50803_15538-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 952381 953391 . - . utg11_pilon exonerate:protein2genome:local exon 952381 953391 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 952381 953391 1650 - . alignment_id 0 ; Query GL50803_15538-t26_1-p1 ; Align 953392 1 1011 utg64_pilon exonerate:protein2genome:local gene 565970 567847 2706 - . gene_id 0 ; sequence GL50803_15545-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 565970 567847 . - . utg64_pilon exonerate:protein2genome:local exon 565970 567847 . - . insertions 6 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 565970 567847 2706 - . alignment_id 0 ; Query GL50803_15545-t26_1-p1 ; Align 567848 1 1446 ; Align 566399 483 105 ; Align 566291 518 321 utg64_pilon exonerate:protein2genome:local gene 568854 569636 1174 + . gene_id 0 ; sequence GL50803_15546-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 568854 569636 . + . utg64_pilon exonerate:protein2genome:local exon 568854 569636 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 568854 569636 1174 + . alignment_id 0 ; Query GL50803_15546-t26_1-p1 ; Align 568854 1 783 utg64_pilon exonerate:protein2genome:local gene 570325 572220 2520 - . gene_id 0 ; sequence GL50803_15547-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 570325 572220 . - . utg64_pilon exonerate:protein2genome:local exon 570325 572220 . - . insertions 3 ; deletions 8 utg64_pilon exonerate:protein2genome:local similarity 570325 572220 2520 - . alignment_id 0 ; Query GL50803_15547-t26_1-p1 ; Align 572221 1 708 ; Align 571513 239 324 ; Align 571189 351 18 ; Align 571171 359 639 ; Align 570529 572 204 utg64_pilon exonerate:protein2genome:local gene 572548 575735 4312 - . gene_id 0 ; sequence GL50803_15548-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 572548 575735 . - . utg64_pilon exonerate:protein2genome:local exon 572548 575735 . - . insertions 0 ; deletions 2 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 572548 575735 4312 - . alignment_id 0 ; Query GL50803_15548-t26_1-p1 ; Align 575736 3 1725 ; Align 574011 579 861 ; Align 573148 867 600 utg64_pilon exonerate:protein2genome:local gene 576041 578275 3545 + . gene_id 0 ; sequence GL50803_15549-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 576041 578275 . + . utg64_pilon exonerate:protein2genome:local exon 576041 578275 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 576041 578275 3545 + . alignment_id 0 ; Query GL50803_15549-t26_1-p1 ; Align 576041 1 2235 utg64_pilon exonerate:protein2genome:local gene 581984 582445 792 + . gene_id 0 ; sequence GL50803_15551-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 581984 582445 . + . utg64_pilon exonerate:protein2genome:local exon 581984 582445 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 581984 582445 792 + . alignment_id 0 ; Query GL50803_15551-t26_1-p1 ; Align 581984 1 462 utg64_pilon exonerate:protein2genome:local gene 583678 585406 1975 + . gene_id 0 ; sequence GL50803_15553-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 583678 585406 . + . utg64_pilon exonerate:protein2genome:local exon 583678 585406 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 583678 585406 1975 + . alignment_id 0 ; Query GL50803_15553-t26_1-p1 ; Align 583678 6 1587 ; Align 585266 535 141 utg731_pilon exonerate:protein2genome:local gene 323633 325822 3096 + . gene_id 0 ; sequence GL50803_15555-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 323633 325822 . + . utg731_pilon exonerate:protein2genome:local exon 323633 325822 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 323633 325822 3096 + . alignment_id 0 ; Query GL50803_15555-t26_1-p1 ; Align 323633 1 2190 utg731_pilon exonerate:protein2genome:local gene 322575 323585 1208 - . gene_id 0 ; sequence GL50803_15556-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 322575 323585 . - . utg731_pilon exonerate:protein2genome:local exon 322575 323585 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 322575 323585 1208 - . alignment_id 0 ; Query GL50803_15556-t26_1-p1 ; Align 323586 1 1011 utg731_pilon exonerate:protein2genome:local gene 316620 317999 1861 - . gene_id 0 ; sequence GL50803_15559-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 316620 317999 . - . utg731_pilon exonerate:protein2genome:local exon 316620 317999 . - . insertions 15 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 316620 317999 1861 - . alignment_id 0 ; Query GL50803_15559-t26_1-p1 ; Align 318000 3 426 ; Align 317571 145 744 ; Align 316815 393 195 utg212_pilon exonerate:protein2genome:local gene 9677 10600 1309 + . gene_id 0 ; sequence GL50803_15564-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 9677 10600 . + . utg212_pilon exonerate:protein2genome:local exon 9677 10600 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 9677 10600 1309 + . alignment_id 0 ; Query GL50803_15564-t26_1-p1 ; Align 9677 25 924 utg11_pilon exonerate:protein2genome:local gene 1776292 1777341 1649 - . gene_id 0 ; sequence GL50803_15566-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1776292 1777341 . - . utg11_pilon exonerate:protein2genome:local exon 1776292 1777341 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1776292 1777341 1649 - . alignment_id 0 ; Query GL50803_15566-t26_1-p1 ; Align 1777342 1 1050 utg11_pilon exonerate:protein2genome:local gene 1779689 1780330 1108 + . gene_id 0 ; sequence GL50803_15567-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1779689 1780330 . + . utg11_pilon exonerate:protein2genome:local exon 1779689 1780330 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1779689 1780330 1108 + . alignment_id 0 ; Query GL50803_15567-t26_1-p1 ; Align 1779689 1 642 utg11_pilon exonerate:protein2genome:local gene 1788815 1789651 1004 + . gene_id 0 ; sequence GL50803_15569-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1788815 1789651 . + . utg11_pilon exonerate:protein2genome:local exon 1788815 1789651 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1788815 1789651 1004 + . alignment_id 0 ; Query GL50803_15569-t26_1-p1 ; Align 1788815 1 573 ; Align 1789388 194 264 utg18_pilon exonerate:protein2genome:local gene 465394 467499 2363 + . gene_id 0 ; sequence GL50803_15573-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 465394 467499 . + . utg18_pilon exonerate:protein2genome:local exon 465394 467499 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 465394 467499 2363 + . alignment_id 0 ; Query GL50803_15573-t26_1-p1 ; Align 465394 43 2106 utg18_pilon exonerate:protein2genome:local gene 472377 474562 3452 - . gene_id 0 ; sequence GL50803_15574-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 472377 474562 . - . utg18_pilon exonerate:protein2genome:local exon 472377 474562 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local similarity 472377 474562 3452 - . alignment_id 0 ; Query GL50803_15574-t26_1-p1 ; Align 474563 1 30 ; Align 474531 11 834 ; Align 473697 290 1320 utg18_pilon exonerate:protein2genome:local gene 484673 486922 3150 + . gene_id 0 ; sequence GL50803_15576-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 484673 486922 . + . utg18_pilon exonerate:protein2genome:local exon 484673 486922 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 484673 486922 3150 + . alignment_id 0 ; Query GL50803_15576-t26_1-p1 ; Align 484673 1 2250 utg47_pilon exonerate:protein2genome:local gene 24169 25194 1639 + . gene_id 0 ; sequence GL50803_15581-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 24169 25194 . + . utg47_pilon exonerate:protein2genome:local exon 24169 25194 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 24169 25194 1639 + . alignment_id 0 ; Query GL50803_15581-t26_1-p1 ; Align 24169 1 1026 utg47_pilon exonerate:protein2genome:local gene 49254 53258 5162 + . gene_id 0 ; sequence GL50803_15585-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 49254 53258 . + . utg47_pilon exonerate:protein2genome:local exon 49254 53258 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 49254 53258 5162 + . alignment_id 0 ; Query GL50803_15585-t26_1-p1 ; Align 49254 1 828 ; Align 50085 277 3174 utg47_pilon exonerate:protein2genome:local gene 57881 58651 1112 - . gene_id 0 ; sequence GL50803_15587-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 57881 58651 . - . utg47_pilon exonerate:protein2genome:local exon 57881 58651 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 57881 58651 1112 - . alignment_id 0 ; Query GL50803_15587-t26_1-p1 ; Align 58652 1 771 utg731_pilon exonerate:protein2genome:local gene 1360672 1361706 1585 + . gene_id 0 ; sequence GL50803_15589-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1360672 1361706 . + . utg731_pilon exonerate:protein2genome:local exon 1360672 1361706 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1360672 1361706 1585 + . alignment_id 0 ; Query GL50803_15589-t26_1-p1 ; Align 1360672 1 1035 utg731_pilon exonerate:protein2genome:local gene 46292 49860 4442 + . gene_id 0 ; sequence GL50803_15591-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 46292 49860 . + . utg731_pilon exonerate:protein2genome:local exon 46292 49860 . + . insertions 3 ; deletions 1 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 46292 49860 4442 + . alignment_id 0 ; Query GL50803_15591-t26_1-p1 ; Align 46292 1 189 ; Align 46481 65 21 ; Align 46503 72 30 ; Align 46534 82 3210 ; Align 49747 1152 114 utg731_pilon exonerate:protein2genome:local gene 85660 87648 2815 + . gene_id 0 ; sequence GL50803_15594-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 85660 87648 . + . utg731_pilon exonerate:protein2genome:local exon 85660 87648 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 85660 87648 2815 + . alignment_id 0 ; Query GL50803_15594-t26_1-p1 ; Align 85660 1 1989 utg308_pilon exonerate:protein2genome:local gene 484948 485481 802 + . gene_id 0 ; sequence GL50803_15598-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 484948 485481 . + . utg308_pilon exonerate:protein2genome:local exon 484948 485481 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 484948 485481 802 + . alignment_id 0 ; Query GL50803_15598-t26_1-p1 ; Align 484948 1 534 utg308_pilon exonerate:protein2genome:local gene 487983 488474 596 + . gene_id 0 ; sequence GL50803_15599-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 487983 488474 . + . utg308_pilon exonerate:protein2genome:local exon 487983 488474 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 487983 488474 596 + . alignment_id 0 ; Query GL50803_15599-t26_1-p1 ; Align 487983 1 492 utg308_pilon exonerate:protein2genome:local gene 499392 499919 727 + . gene_id 0 ; sequence GL50803_15600-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 499392 499919 . + . utg308_pilon exonerate:protein2genome:local exon 499392 499919 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 499392 499919 727 + . alignment_id 0 ; Query GL50803_15600-t26_1-p1 ; Align 499392 1 528 utg308_pilon exonerate:protein2genome:local gene 510862 511242 531 + . gene_id 0 ; sequence GL50803_15602-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 510862 511242 . + . utg308_pilon exonerate:protein2genome:local exon 510862 511242 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 510862 511242 531 + . alignment_id 0 ; Query GL50803_15602-t26_1-p1 ; Align 510862 1 381 utg308_pilon exonerate:protein2genome:local gene 511290 512072 1081 + . gene_id 0 ; sequence GL50803_15603-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 511290 512072 . + . utg308_pilon exonerate:protein2genome:local exon 511290 512072 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 511290 512072 1081 + . alignment_id 0 ; Query GL50803_15603-t26_1-p1 ; Align 511290 1 783 utg308_pilon exonerate:protein2genome:local gene 513733 514506 957 - . gene_id 0 ; sequence GL50803_15604-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 513733 514506 . - . utg308_pilon exonerate:protein2genome:local exon 513733 514506 . - . insertions 3 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 513733 514506 957 - . alignment_id 0 ; Query GL50803_15604-t26_1-p1 ; Align 514507 1 471 ; Align 514036 160 81 ; Align 513952 187 219 utg308_pilon exonerate:protein2genome:local gene 514738 515883 1666 - . gene_id 0 ; sequence GL50803_15605-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 514738 515883 . - . utg308_pilon exonerate:protein2genome:local exon 514738 515883 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 514738 515883 1666 - . alignment_id 0 ; Query GL50803_15605-t26_1-p1 ; Align 515884 1 1146 utg308_pilon exonerate:protein2genome:local gene 524499 524783 469 - . gene_id 0 ; sequence GL50803_15606-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 524499 524783 . - . utg308_pilon exonerate:protein2genome:local exon 524499 524783 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 524499 524783 469 - . alignment_id 0 ; Query GL50803_15606-t26_1-p1 ; Align 524784 1 285 utg1966_pilon exonerate:protein2genome:local gene 147256 147666 382 + . gene_id 0 ; sequence GL50803_15767-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 147256 147666 . + . utg1966_pilon exonerate:protein2genome:local exon 147256 147666 . + . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 147256 147666 382 + . alignment_id 0 ; Query GL50803_15767-t26_1-p1 ; Align 147256 3 411 utg731_pilon exonerate:protein2genome:local gene 1454151 1454972 918 - . gene_id 0 ; sequence GL50803_15777-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1454151 1454972 . - . utg731_pilon exonerate:protein2genome:local exon 1454151 1454972 . - . insertions 0 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 1454151 1454972 918 - . alignment_id 0 ; Query GL50803_15777-t26_1-p1 ; Align 1454973 189 114 ; Align 1454859 231 708 utg47_pilon exonerate:protein2genome:local gene 1997417 1998403 1121 + . gene_id 0 ; sequence GL50803_15820-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1997417 1998403 . + . utg47_pilon exonerate:protein2genome:local exon 1997417 1998403 . + . insertions 12 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1997417 1998403 1121 + . alignment_id 0 ; Query GL50803_15820-t26_1-p1 ; Align 1997417 1 741 ; Align 1998170 248 234 utg99_pilon exonerate:protein2genome:local gene 374395 376740 3899 + . gene_id 0 ; sequence GL50803_15823-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 374395 376740 . + . utg99_pilon exonerate:protein2genome:local exon 374395 376740 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 374395 376740 3899 + . alignment_id 0 ; Query GL50803_15823-t26_1-p1 ; Align 374395 1 2346 utg265_pilon exonerate:protein2genome:local gene 17417 18989 2618 + . gene_id 0 ; sequence GL50803_15832-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 17417 18989 . + . utg265_pilon exonerate:protein2genome:local exon 17417 18989 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 17417 18989 2618 + . alignment_id 0 ; Query GL50803_15832-t26_1-p1 ; Align 17417 1 36 ; Align 17454 13 1536 utg212_pilon exonerate:protein2genome:local gene 43925 44734 1260 + . gene_id 0 ; sequence GL50803_15834-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 43925 44734 . + . utg212_pilon exonerate:protein2genome:local exon 43925 44734 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 43925 44734 1260 + . alignment_id 0 ; Query GL50803_15834-t26_1-p1 ; Align 43925 1 810 utg47_pilon exonerate:protein2genome:local gene 512193 512957 942 + . gene_id 0 ; sequence GL50803_15847-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 512193 512957 . + . utg47_pilon exonerate:protein2genome:local exon 512193 512957 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 512193 512957 942 + . alignment_id 0 ; Query GL50803_15847-t26_1-p1 ; Align 512193 1 765 utg47_pilon exonerate:protein2genome:local gene 446805 448605 2730 + . gene_id 0 ; sequence GL50803_15867-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 446805 448605 . + . utg47_pilon exonerate:protein2genome:local exon 446805 448605 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 446805 448605 2730 + . alignment_id 0 ; Query GL50803_15867-t26_1-p1 ; Align 446805 1 942 ; Align 447748 316 858 utg47_pilon exonerate:protein2genome:local gene 448631 450452 2149 - . gene_id 0 ; sequence GL50803_15868-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 448631 450452 . - . utg47_pilon exonerate:protein2genome:local exon 448631 450452 . - . insertions 12 ; deletions 4 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 448631 450452 2149 - . alignment_id 0 ; Query GL50803_15868-t26_1-p1 ; Align 450453 1 333 ; Align 450116 112 18 ; Align 450095 118 315 ; Align 449780 226 486 ; Align 449288 388 336 ; Align 448952 501 120 ; Align 448829 541 198 utg47_pilon exonerate:protein2genome:local gene 450597 451274 1176 + . gene_id 0 ; sequence GL50803_15869-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 450597 451274 . + . utg47_pilon exonerate:protein2genome:local exon 450597 451274 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 450597 451274 1176 + . alignment_id 0 ; Query GL50803_15869-t26_1-p1 ; Align 450597 1 678 utg349_pilon exonerate:protein2genome:local gene 1412729 1414129 2310 - . gene_id 0 ; sequence GL50803_15871-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1412729 1414129 . - . utg349_pilon exonerate:protein2genome:local exon 1412729 1414129 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1412729 1414129 2310 - . alignment_id 0 ; Query GL50803_15871-t26_1-p1 ; Align 1414130 1 1401 utg11_pilon exonerate:protein2genome:local gene 284196 287774 3928 + . gene_id 0 ; sequence GL50803_15873-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 284196 287774 . + . utg11_pilon exonerate:protein2genome:local exon 284196 287774 . + . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 284196 287774 3928 + . alignment_id 0 ; Query GL50803_15873-t26_1-p1 ; Align 284196 1 837 ; Align 285033 282 930 ; Align 285963 593 1812 utg731_pilon exonerate:protein2genome:local gene 1317688 1319169 1219 - . gene_id 0 ; sequence GL50803_15887-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1317688 1319169 . - . utg731_pilon exonerate:protein2genome:local exon 1317688 1319169 . - . insertions 0 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 1317688 1319169 1219 - . alignment_id 0 ; Query GL50803_15887-t26_1-p1 ; Align 1319170 37 546 ; Align 1318624 220 186 ; Align 1318438 286 750 utg99_pilon exonerate:protein2genome:local gene 382980 384851 2618 + . gene_id 0 ; sequence GL50803_15888-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 382980 384851 . + . utg99_pilon exonerate:protein2genome:local exon 382980 384851 . + . insertions 12 ; deletions 3 utg99_pilon exonerate:protein2genome:local similarity 382980 384851 2618 + . alignment_id 0 ; Query GL50803_15888-t26_1-p1 ; Align 382980 1 456 ; Align 383448 153 582 ; Align 384030 348 432 ; Align 384462 493 156 ; Align 384618 546 234 utg99_pilon exonerate:protein2genome:local gene 384886 385983 1484 + . gene_id 0 ; sequence GL50803_15889-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 384886 385983 . + . utg99_pilon exonerate:protein2genome:local exon 384886 385983 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 384886 385983 1484 + . alignment_id 0 ; Query GL50803_15889-t26_1-p1 ; Align 384886 1 1098 utg265_pilon exonerate:protein2genome:local gene 152105 291209 380 + . gene_id 0 ; sequence GL50803_15893-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 152105 152216 . + . utg265_pilon exonerate:protein2genome:local exon 152105 152216 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 152217 152218 . + . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 152217 290787 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 290786 290787 . + . intron_id 0 ; splice_site "CA" utg265_pilon exonerate:protein2genome:local cds 290788 291209 . + . utg265_pilon exonerate:protein2genome:local exon 290788 291209 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 152105 291209 380 + . alignment_id 0 ; Query GL50803_15893-t26_1-p1 ; Align 152105 24 111 ; Align 290790 62 420 utg47_pilon exonerate:protein2genome:local gene 608799 610688 2822 - . gene_id 0 ; sequence GL50803_15897-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 608799 610688 . - . utg47_pilon exonerate:protein2genome:local exon 608799 610688 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 608799 610688 2822 - . alignment_id 0 ; Query GL50803_15897-t26_1-p1 ; Align 610689 1 1437 ; Align 609252 481 453 utg47_pilon exonerate:protein2genome:local gene 607129 608765 2064 + . gene_id 0 ; sequence GL50803_15898-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 607129 608765 . + . utg47_pilon exonerate:protein2genome:local exon 607129 608765 . + . insertions 6 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 607129 608765 2064 + . alignment_id 0 ; Query GL50803_15898-t26_1-p1 ; Align 607129 1 228 ; Align 607359 78 228 ; Align 607593 154 1173 utg47_pilon exonerate:protein2genome:local gene 1991593 1991817 308 + . gene_id 0 ; sequence GL50803_1590-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1991593 1991817 . + . utg47_pilon exonerate:protein2genome:local exon 1991593 1991817 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1991593 1991817 308 + . alignment_id 0 ; Query GL50803_1590-t26_1-p1 ; Align 1991593 1 225 utg47_pilon exonerate:protein2genome:local gene 1547265 1547737 457 - . gene_id 0 ; sequence GL50803_15906-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1547265 1547737 . - . utg47_pilon exonerate:protein2genome:local exon 1547265 1547737 . - . insertions 0 ; deletions 3 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1547265 1547737 457 - . alignment_id 0 ; Query GL50803_15906-t26_1-p1 ; Align 1547738 137 126 ; Align 1547610 179 6 ; Align 1547604 182 36 ; Align 1547568 195 171 ; Align 1547397 253 132 utg265_pilon exonerate:protein2genome:local gene 154026 154187 125 - . gene_id 0 ; sequence GL50803_15907-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 154026 154187 . - . utg265_pilon exonerate:protein2genome:local exon 154026 154187 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 154026 154187 125 - . alignment_id 0 ; Query GL50803_15907-t26_1-p1 ; Align 154188 149 105 ; Align 154083 185 57 utg265_pilon exonerate:protein2genome:local gene 690112 690796 1035 + . gene_id 0 ; sequence GL50803_15918-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 690112 690796 . + . utg265_pilon exonerate:protein2genome:local exon 690112 690796 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 690112 690796 1035 + . alignment_id 0 ; Query GL50803_15918-t26_1-p1 ; Align 690112 1 411 ; Align 690524 138 273 utg349_pilon exonerate:protein2genome:local gene 781524 783650 3048 - . gene_id 0 ; sequence GL50803_15930-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 781524 783650 . - . utg349_pilon exonerate:protein2genome:local exon 781524 783650 . - . insertions 0 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 781524 783650 3048 - . alignment_id 0 ; Query GL50803_15930-t26_1-p1 ; Align 783651 1 843 ; Align 782808 283 603 ; Align 782205 485 402 ; Align 781803 621 279 utg47_pilon exonerate:protein2genome:local gene 1530929 1531759 985 + . gene_id 0 ; sequence GL50803_15936-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1530929 1531759 . + . utg47_pilon exonerate:protein2genome:local exon 1530929 1531759 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1530929 1531759 985 + . alignment_id 0 ; Query GL50803_15936-t26_1-p1 ; Align 1530929 1 831 utg265_pilon exonerate:protein2genome:local gene 625065 626102 1377 + . gene_id 0 ; sequence GL50803_15939-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 625065 626102 . + . utg265_pilon exonerate:protein2genome:local exon 625065 626102 . + . insertions 0 ; deletions 5 utg265_pilon exonerate:protein2genome:local similarity 625065 626102 1377 + . alignment_id 0 ; Query GL50803_15939-t26_1-p1 ; Align 625065 78 27 ; Align 625092 88 675 ; Align 625767 314 15 ; Align 625782 322 321 utg265_pilon exonerate:protein2genome:local gene 882286 882870 727 + . gene_id 0 ; sequence GL50803_15944-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 882286 882870 . + . utg265_pilon exonerate:protein2genome:local exon 882286 882870 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 882286 882870 727 + . alignment_id 0 ; Query GL50803_15944-t26_1-p1 ; Align 882286 1 585 utg99_pilon exonerate:protein2genome:local gene 400005 401033 1719 - . gene_id 0 ; sequence GL50803_15948-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 400005 401033 . - . utg99_pilon exonerate:protein2genome:local exon 400005 401033 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 400005 401033 1719 - . alignment_id 0 ; Query GL50803_15948-t26_1-p1 ; Align 401034 1 1029 utg349_pilon exonerate:protein2genome:local gene 672086 675440 5254 + . gene_id 0 ; sequence GL50803_15953-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 672086 675440 . + . utg349_pilon exonerate:protein2genome:local exon 672086 675440 . + . insertions 0 ; deletions 0 ; frameshifts 4 utg349_pilon exonerate:protein2genome:local similarity 672086 675440 5254 + . alignment_id 0 ; Query GL50803_15953-t26_1-p1 ; Align 672086 1 561 ; Align 672648 188 75 ; Align 672725 213 2580 ; Align 675306 1073 135 utg349_pilon exonerate:protein2genome:local gene 669800 671882 3056 - . gene_id 0 ; sequence GL50803_15954-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 669800 671882 . - . utg349_pilon exonerate:protein2genome:local exon 669800 671882 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 669800 671882 3056 - . alignment_id 0 ; Query GL50803_15954-t26_1-p1 ; Align 671883 1 246 ; Align 671636 83 1836 utg64_pilon exonerate:protein2genome:local gene 622010 622321 533 + . gene_id 0 ; sequence GL50803_15955-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 622010 622321 . + . utg64_pilon exonerate:protein2genome:local exon 622010 622321 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 622010 622321 533 + . alignment_id 0 ; Query GL50803_15955-t26_1-p1 ; Align 622010 1 312 utg64_pilon exonerate:protein2genome:local gene 623408 625258 3078 - . gene_id 0 ; sequence GL50803_15956-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 623408 625258 . - . utg64_pilon exonerate:protein2genome:local exon 623408 625258 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 623408 625258 3078 - . alignment_id 0 ; Query GL50803_15956-t26_1-p1 ; Align 625259 1 1851 utg47_pilon exonerate:protein2genome:local gene 499224 501677 2761 + . gene_id 0 ; sequence GL50803_15958-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 499224 501677 . + . utg47_pilon exonerate:protein2genome:local exon 499224 501677 . + . insertions 3 ; deletions 6 ; frameshifts 3 utg47_pilon exonerate:protein2genome:local similarity 499224 501677 2761 + . alignment_id 0 ; Query GL50803_15958-t26_1-p1 ; Align 499224 234 186 ; Align 499411 297 270 ; Align 499681 388 21 ; Align 499702 398 75 ; Align 499778 424 441 ; Align 500220 571 1068 ; Align 501291 927 387 utg99_pilon exonerate:protein2genome:local gene 350063 351646 2090 - . gene_id 0 ; sequence GL50803_15962-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 350063 351646 . - . utg99_pilon exonerate:protein2genome:local exon 350063 351646 . - . insertions 6 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 350063 351646 2090 - . alignment_id 0 ; Query GL50803_15962-t26_1-p1 ; Align 351647 1 1407 ; Align 350234 470 171 utg47_pilon exonerate:protein2genome:local gene 29679 170628 1052 + . gene_id 0 ; sequence GL50803_15965-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 29679 29957 . + . utg47_pilon exonerate:protein2genome:local exon 29679 29957 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 29958 29959 . + . intron_id 1 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local intron 29958 30767 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 30766 30767 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 30768 31318 . + . utg47_pilon exonerate:protein2genome:local exon 30768 31318 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 31319 31320 . + . intron_id 2 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 31319 170330 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 170329 170330 . + . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 170331 170628 . + . utg47_pilon exonerate:protein2genome:local exon 170331 170628 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 29679 170628 1052 + . alignment_id 0 ; Query GL50803_15965-t26_1-p1 ; Align 29679 21 279 ; Align 30768 114 549 ; Align 170332 298 297 utg47_pilon exonerate:protein2genome:local gene 1994013 1995728 2638 + . gene_id 0 ; sequence GL50803_1597-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1994013 1995728 . + . utg47_pilon exonerate:protein2genome:local exon 1994013 1995728 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1994013 1995728 2638 + . alignment_id 0 ; Query GL50803_1597-t26_1-p1 ; Align 1994013 1 1716 utg18_pilon exonerate:protein2genome:local gene 263092 265380 2717 - . gene_id 0 ; sequence GL50803_15972-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 263092 265380 . - . utg18_pilon exonerate:protein2genome:local exon 263092 265380 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 263092 265380 2717 - . alignment_id 0 ; Query GL50803_15972-t26_1-p1 ; Align 265381 575 2289 utg47_pilon exonerate:protein2genome:local gene 324061 326901 3770 - . gene_id 0 ; sequence GL50803_15977-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 324061 326901 . - . utg47_pilon exonerate:protein2genome:local exon 324061 326901 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 324061 326901 3770 - . alignment_id 0 ; Query GL50803_15977-t26_1-p1 ; Align 326902 1 2841 utg308_pilon exonerate:protein2genome:local gene 596760 598331 2618 + . gene_id 0 ; sequence GL50803_15983-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 596760 598331 . + . utg308_pilon exonerate:protein2genome:local exon 596760 598331 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 596760 598331 2618 + . alignment_id 0 ; Query GL50803_15983-t26_1-p1 ; Align 596760 19 1572 utg308_pilon exonerate:protein2genome:local gene 600809 601639 1016 - . gene_id 0 ; sequence GL50803_15984-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 600809 601639 . - . utg308_pilon exonerate:protein2genome:local exon 600809 601639 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 600809 601639 1016 - . alignment_id 0 ; Query GL50803_15984-t26_1-p1 ; Align 601640 1 321 ; Align 601316 108 507 utg308_pilon exonerate:protein2genome:local gene 601676 602463 1203 + . gene_id 0 ; sequence GL50803_15985-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 601676 602463 . + . utg308_pilon exonerate:protein2genome:local exon 601676 602463 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 601676 602463 1203 + . alignment_id 0 ; Query GL50803_15985-t26_1-p1 ; Align 601676 1 279 ; Align 601957 95 507 utg265_pilon exonerate:protein2genome:local gene 678096 679097 1479 + . gene_id 0 ; sequence GL50803_15987-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 678096 679097 . + . utg265_pilon exonerate:protein2genome:local exon 678096 679097 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 678096 679097 1479 + . alignment_id 0 ; Query GL50803_15987-t26_1-p1 ; Align 678096 5 1002 utg265_pilon exonerate:protein2genome:local gene 679128 682760 4715 + . gene_id 0 ; sequence GL50803_15988-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 679128 682760 . + . utg265_pilon exonerate:protein2genome:local exon 679128 682760 . + . insertions 3 ; deletions 5 utg265_pilon exonerate:protein2genome:local similarity 679128 682760 4715 + . alignment_id 0 ; Query GL50803_15988-t26_1-p1 ; Align 679128 1 1446 ; Align 680577 483 756 ; Align 681333 736 882 ; Align 682215 1034 546 utg11_pilon exonerate:protein2genome:local gene 843424 844290 1024 - . gene_id 0 ; sequence GL50803_15989-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 843424 844290 . - . utg11_pilon exonerate:protein2genome:local exon 843424 844290 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 843424 844290 1024 - . alignment_id 0 ; Query GL50803_15989-t26_1-p1 ; Align 844291 1 642 ; Align 843649 216 33 ; Align 843616 228 192 utg11_pilon exonerate:protein2genome:local gene 838109 841144 3841 - . gene_id 0 ; sequence GL50803_15991-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 838109 841144 . - . utg11_pilon exonerate:protein2genome:local exon 838109 841144 . - . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 838109 841144 3841 - . alignment_id 0 ; Query GL50803_15991-t26_1-p1 ; Align 841145 1 2610 ; Align 838535 872 123 ; Align 838412 916 303 utg731_pilon exonerate:protein2genome:local gene 475078 598934 3573 + . gene_id 0 ; sequence GL50803_15993-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 475078 478199 . + . utg731_pilon exonerate:protein2genome:local exon 475078 478199 . + . insertions 0 ; deletions 4 utg731_pilon exonerate:protein2genome:local splice5 478200 478201 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 478200 598909 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 598908 598909 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 598910 598934 . + . utg731_pilon exonerate:protein2genome:local exon 598910 598934 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 475078 598934 3573 + . alignment_id 0 ; Query GL50803_15993-t26_1-p1 ; Align 475078 1 2052 ; Align 477130 687 534 ; Align 477664 866 138 ; Align 477802 913 396 ; Align 598911 1046 24 utg18_pilon exonerate:protein2genome:local gene 378170 383029 6977 - . gene_id 0 ; sequence GL50803_15995-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 378170 383029 . - . utg18_pilon exonerate:protein2genome:local exon 378170 383029 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 378170 383029 6977 - . alignment_id 0 ; Query GL50803_15995-t26_1-p1 ; Align 383030 1 4860 utg99_pilon exonerate:protein2genome:local gene 337201 339165 2222 + . gene_id 0 ; sequence GL50803_16001-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 337201 339165 . + . utg99_pilon exonerate:protein2genome:local exon 337201 339165 . + . insertions 0 ; deletions 4 utg99_pilon exonerate:protein2genome:local similarity 337201 339165 2222 + . alignment_id 0 ; Query GL50803_16001-t26_1-p1 ; Align 337201 1 1434 ; Align 338635 482 105 ; Align 338740 518 426 utg99_pilon exonerate:protein2genome:local gene 360592 361401 1234 + . gene_id 0 ; sequence GL50803_16006-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 360592 361401 . + . utg99_pilon exonerate:protein2genome:local exon 360592 361401 . + . insertions 0 ; deletions 2 utg99_pilon exonerate:protein2genome:local similarity 360592 361401 1234 + . alignment_id 0 ; Query GL50803_16006-t26_1-p1 ; Align 360592 51 423 ; Align 361015 194 387 utg47_pilon exonerate:protein2genome:local gene 1853106 1854605 2410 + . gene_id 0 ; sequence GL50803_16013-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1853106 1854605 . + . utg47_pilon exonerate:protein2genome:local exon 1853106 1854605 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1853106 1854605 2410 + . alignment_id 0 ; Query GL50803_16013-t26_1-p1 ; Align 1853106 1 1500 utg47_pilon exonerate:protein2genome:local gene 2157073 2160162 4015 - . gene_id 0 ; sequence GL50803_16020-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2157073 2160162 . - . utg47_pilon exonerate:protein2genome:local exon 2157073 2160162 . - . insertions 3 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 2157073 2160162 4015 - . alignment_id 0 ; Query GL50803_16020-t26_1-p1 ; Align 2160163 1 1275 ; Align 2158885 426 501 ; Align 2158384 594 1203 ; Align 2157181 997 108 utg99_pilon exonerate:protein2genome:local gene 545516 548326 3013 + . gene_id 0 ; sequence GL50803_16021-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 545516 548326 . + . utg99_pilon exonerate:protein2genome:local exon 545516 548326 . + . insertions 6 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 545516 548326 3013 + . alignment_id 0 ; Query GL50803_16021-t26_1-p1 ; Align 545516 1 1761 ; Align 547280 588 429 ; Align 547712 731 615 utg18_pilon exonerate:protein2genome:local gene 311655 312950 2072 - . gene_id 0 ; sequence GL50803_16034-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 311655 312950 . - . utg18_pilon exonerate:protein2genome:local exon 311655 312950 . - . insertions 3 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 311655 312950 2072 - . alignment_id 0 ; Query GL50803_16034-t26_1-p1 ; Align 312951 1 1134 ; Align 311814 379 159 utg731_pilon exonerate:protein2genome:local gene 795909 800612 6749 + . gene_id 0 ; sequence GL50803_16037-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 795909 800612 . + . utg731_pilon exonerate:protein2genome:local exon 795909 800612 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 795909 800612 6749 + . alignment_id 0 ; Query GL50803_16037-t26_1-p1 ; Align 795909 1 4704 utg731_pilon exonerate:protein2genome:local gene 789558 792053 3927 + . gene_id 0 ; sequence GL50803_16039-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 789558 792053 . + . utg731_pilon exonerate:protein2genome:local exon 789558 792053 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 789558 792053 3927 + . alignment_id 0 ; Query GL50803_16039-t26_1-p1 ; Align 789558 17 2496 utg212_pilon exonerate:protein2genome:local gene 268714 270586 2748 - . gene_id 0 ; sequence GL50803_16042-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 268714 270586 . - . utg212_pilon exonerate:protein2genome:local exon 268714 270586 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 268714 270586 2748 - . alignment_id 0 ; Query GL50803_16042-t26_1-p1 ; Align 270587 1 144 ; Align 270442 49 1728 utg47_pilon exonerate:protein2genome:local gene 290116 290598 651 - . gene_id 0 ; sequence GL50803_16044-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 290116 290598 . - . utg47_pilon exonerate:protein2genome:local exon 290116 290598 . - . insertions 0 ; deletions 6 utg47_pilon exonerate:protein2genome:local similarity 290116 290598 651 - . alignment_id 0 ; Query GL50803_16044-t26_1-p1 ; Align 290599 5 60 ; Align 290539 30 405 ; Align 290134 166 18 utg47_pilon exonerate:protein2genome:local gene 1312084 1314138 2611 + . gene_id 0 ; sequence GL50803_16049-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1312084 1314138 . + . utg47_pilon exonerate:protein2genome:local exon 1312084 1314138 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1312084 1314138 2611 + . alignment_id 0 ; Query GL50803_16049-t26_1-p1 ; Align 1312084 1 2055 utg47_pilon exonerate:protein2genome:local gene 1309006 1311973 3633 - . gene_id 0 ; sequence GL50803_16050-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1309006 1311973 . - . utg47_pilon exonerate:protein2genome:local exon 1309006 1311973 . - . insertions 6 ; deletions 2 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 1309006 1311973 3633 - . alignment_id 0 ; Query GL50803_16050-t26_1-p1 ; Align 1311974 1 258 ; Align 1311715 87 978 ; Align 1310735 414 468 ; Align 1310266 570 363 ; Align 1309897 691 648 ; Align 1309249 908 243 utg47_pilon exonerate:protein2genome:local gene 1063864 1064496 933 - . gene_id 0 ; sequence GL50803_16054-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1063864 1064496 . - . utg47_pilon exonerate:protein2genome:local exon 1063864 1064496 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1063864 1064496 933 - . alignment_id 0 ; Query GL50803_16054-t26_1-p1 ; Align 1064497 1 633 utg212_pilon exonerate:protein2genome:local gene 203904 205485 2047 - . gene_id 0 ; sequence GL50803_16064-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 203904 205485 . - . utg212_pilon exonerate:protein2genome:local exon 203904 205485 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 203904 205485 2047 - . alignment_id 0 ; Query GL50803_16064-t26_1-p1 ; Align 205486 1 276 ; Align 205209 93 1305 utg212_pilon exonerate:protein2genome:local gene 196128 198380 2777 - . gene_id 0 ; sequence GL50803_16065-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 196128 198380 . - . utg212_pilon exonerate:protein2genome:local exon 196128 198380 . - . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 196128 198380 2777 - . alignment_id 0 ; Query GL50803_16065-t26_1-p1 ; Align 198381 1 522 ; Align 197856 175 1728 utg64_pilon exonerate:protein2genome:local gene 614931 615887 1494 - . gene_id 0 ; sequence GL50803_16067-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 614931 615887 . - . utg64_pilon exonerate:protein2genome:local exon 614931 615887 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 614931 615887 1494 - . alignment_id 0 ; Query GL50803_16067-t26_1-p1 ; Align 615888 1 957 utg64_pilon exonerate:protein2genome:local gene 612670 614265 2386 + . gene_id 0 ; sequence GL50803_16068-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 612670 614265 . + . utg64_pilon exonerate:protein2genome:local exon 612670 614265 . + . insertions 0 ; deletions 5 utg64_pilon exonerate:protein2genome:local similarity 612670 614265 2386 + . alignment_id 0 ; Query GL50803_16068-t26_1-p1 ; Align 612670 1 966 ; Align 613636 325 45 ; Align 613681 343 585 utg64_pilon exonerate:protein2genome:local gene 615983 617509 2272 - . gene_id 0 ; sequence GL50803_16069-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 615983 617509 . - . utg64_pilon exonerate:protein2genome:local exon 615983 617509 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 615983 617509 2272 - . alignment_id 0 ; Query GL50803_16069-t26_1-p1 ; Align 617510 1 1527 utg64_pilon exonerate:protein2genome:local gene 619038 621290 3171 + . gene_id 0 ; sequence GL50803_16070-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 619038 619200 . + . utg64_pilon exonerate:protein2genome:local exon 619038 619200 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 619201 619202 . + . intron_id 1 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local intron 619201 619248 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 619247 619248 . + . intron_id 0 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local cds 619249 621290 . + . utg64_pilon exonerate:protein2genome:local exon 619249 621290 . + . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 619038 621290 3171 + . alignment_id 0 ; Query GL50803_16070-t26_1-p1 ; Align 619038 1 162 ; Align 619251 56 585 ; Align 619836 253 1455 utg731_pilon exonerate:protein2genome:local gene 739530 740132 1063 + . gene_id 0 ; sequence GL50803_16076-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 739530 740132 . + . utg731_pilon exonerate:protein2genome:local exon 739530 740132 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 739530 740132 1063 + . alignment_id 0 ; Query GL50803_16076-t26_1-p1 ; Align 739530 1 603 utg47_pilon exonerate:protein2genome:local gene 596435 597280 1136 - . gene_id 0 ; sequence GL50803_16077-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 596435 597280 . - . utg47_pilon exonerate:protein2genome:local exon 596435 597280 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 596435 597280 1136 - . alignment_id 0 ; Query GL50803_16077-t26_1-p1 ; Align 597281 1 846 utg47_pilon exonerate:protein2genome:local gene 595227 596414 1834 + . gene_id 0 ; sequence GL50803_16078-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 595227 596414 . + . utg47_pilon exonerate:protein2genome:local exon 595227 596414 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 595227 596414 1834 + . alignment_id 0 ; Query GL50803_16078-t26_1-p1 ; Align 595227 1 1188 utg47_pilon exonerate:protein2genome:local gene 547869 549489 2436 + . gene_id 0 ; sequence GL50803_16085-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 547869 549489 . + . utg47_pilon exonerate:protein2genome:local exon 547869 549489 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 547869 549489 2436 + . alignment_id 0 ; Query GL50803_16085-t26_1-p1 ; Align 547869 1 1044 ; Align 548914 349 576 utg47_pilon exonerate:protein2genome:local gene 549567 550318 1243 + . gene_id 0 ; sequence GL50803_16086-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 549567 550318 . + . utg47_pilon exonerate:protein2genome:local exon 549567 550318 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 549567 550318 1243 + . alignment_id 0 ; Query GL50803_16086-t26_1-p1 ; Align 549567 1 75 ; Align 549644 27 675 utg731_pilon exonerate:protein2genome:local gene 465905 467086 1493 + . gene_id 0 ; sequence GL50803_16089-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 465905 467086 . + . utg731_pilon exonerate:protein2genome:local exon 465905 467086 . + . insertions 0 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 465905 467086 1493 + . alignment_id 0 ; Query GL50803_16089-t26_1-p1 ; Align 465905 16 885 ; Align 466790 315 297 utg731_pilon exonerate:protein2genome:local gene 467108 468364 1395 - . gene_id 0 ; sequence GL50803_16090-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 467108 468364 . - . utg731_pilon exonerate:protein2genome:local exon 467108 468364 . - . insertions 0 ; deletions 7 utg731_pilon exonerate:protein2genome:local similarity 467108 468364 1395 - . alignment_id 0 ; Query GL50803_16090-t26_1-p1 ; Align 468365 13 618 ; Align 467747 220 30 ; Align 467717 231 348 ; Align 467369 348 12 ; Align 467357 353 51 ; Align 467306 371 36 ; Align 467270 385 162 utg11_pilon exonerate:protein2genome:local gene 96943 98427 1764 + . gene_id 0 ; sequence GL50803_16110-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 96943 98427 . + . utg11_pilon exonerate:protein2genome:local exon 96943 98427 . + . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 96943 98427 1764 + . alignment_id 0 ; Query GL50803_16110-t26_1-p1 ; Align 96943 1 645 ; Align 97588 218 33 ; Align 97621 230 807 utg11_pilon exonerate:protein2genome:local gene 95067 96929 2755 + . gene_id 0 ; sequence GL50803_16111-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 95067 96929 . + . utg11_pilon exonerate:protein2genome:local exon 95067 96929 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 95067 96929 2755 + . alignment_id 0 ; Query GL50803_16111-t26_1-p1 ; Align 95067 1 39 ; Align 95109 14 1821 utg47_pilon exonerate:protein2genome:local gene 614045 614776 756 - . gene_id 0 ; sequence GL50803_16113-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 614045 614776 . - . utg47_pilon exonerate:protein2genome:local exon 614045 614776 . - . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 614045 614776 756 - . alignment_id 0 ; Query GL50803_16113-t26_1-p1 ; Align 614777 1 540 ; Align 614237 185 192 utg47_pilon exonerate:protein2genome:local gene 620532 620801 452 - . gene_id 0 ; sequence GL50803_16114-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 620532 620801 . - . utg47_pilon exonerate:protein2genome:local exon 620532 620801 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 620532 620801 452 - . alignment_id 0 ; Query GL50803_16114-t26_1-p1 ; Align 620802 1 270 utg18_pilon exonerate:protein2genome:local gene 270451 274679 5552 - . gene_id 0 ; sequence GL50803_16122-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 270451 274679 . - . utg18_pilon exonerate:protein2genome:local exon 270451 274679 . - . insertions 21 ; deletions 0 ; frameshifts 5 utg18_pilon exonerate:protein2genome:local similarity 270451 274679 5552 - . alignment_id 0 ; Query GL50803_16122-t26_1-p1 ; Align 274680 1 894 ; Align 273780 299 687 ; Align 273087 528 147 ; Align 272937 577 240 ; Align 272691 657 3 ; Align 272683 658 2232 utg47_pilon exonerate:protein2genome:local gene 1775738 1777522 2875 - . gene_id 0 ; sequence GL50803_16124-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1775738 1777522 . - . utg47_pilon exonerate:protein2genome:local exon 1775738 1777522 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1775738 1777522 2875 - . alignment_id 0 ; Query GL50803_16124-t26_1-p1 ; Align 1777523 1 1785 utg47_pilon exonerate:protein2genome:local gene 1769746 1773078 4836 - . gene_id 0 ; sequence GL50803_16125-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1769746 1773078 . - . utg47_pilon exonerate:protein2genome:local exon 1769746 1773078 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1769746 1773078 4836 - . alignment_id 0 ; Query GL50803_16125-t26_1-p1 ; Align 1773079 1 3333 utg47_pilon exonerate:protein2genome:local gene 1764202 1765143 1292 + . gene_id 0 ; sequence GL50803_16126-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1764202 1765143 . + . utg47_pilon exonerate:protein2genome:local exon 1764202 1765143 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1764202 1765143 1292 + . alignment_id 0 ; Query GL50803_16126-t26_1-p1 ; Align 1764202 1 942 utg47_pilon exonerate:protein2genome:local gene 1763011 1764129 1742 + . gene_id 0 ; sequence GL50803_16127-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1763011 1764129 . + . utg47_pilon exonerate:protein2genome:local exon 1763011 1764129 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1763011 1764129 1742 + . alignment_id 0 ; Query GL50803_16127-t26_1-p1 ; Align 1763011 1 1119 utg47_pilon exonerate:protein2genome:local gene 1759613 1761664 3043 + . gene_id 0 ; sequence GL50803_16129-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1759613 1761664 . + . utg47_pilon exonerate:protein2genome:local exon 1759613 1761664 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1759613 1761664 3043 + . alignment_id 0 ; Query GL50803_16129-t26_1-p1 ; Align 1759613 1 1122 ; Align 1760735 376 930 utg47_pilon exonerate:protein2genome:local gene 1756428 1757738 1966 + . gene_id 0 ; sequence GL50803_16130-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1756428 1757738 . + . utg47_pilon exonerate:protein2genome:local exon 1756428 1757738 . + . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1756428 1757738 1966 + . alignment_id 0 ; Query GL50803_16130-t26_1-p1 ; Align 1756428 1 1008 ; Align 1757436 340 303 utg11_pilon exonerate:protein2genome:local gene 1464038 1466572 2951 - . gene_id 0 ; sequence GL50803_16135-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1464038 1466572 . - . utg11_pilon exonerate:protein2genome:local exon 1464038 1466572 . - . insertions 0 ; deletions 8 utg11_pilon exonerate:protein2genome:local similarity 1464038 1466572 2951 - . alignment_id 0 ; Query GL50803_16135-t26_1-p1 ; Align 1466573 4 1377 ; Align 1465196 466 642 ; Align 1464554 681 243 ; Align 1464311 766 273 utg308_pilon exonerate:protein2genome:local gene 770571 772037 2118 - . gene_id 0 ; sequence GL50803_16141-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 770571 772037 . - . utg308_pilon exonerate:protein2genome:local exon 770571 772037 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 770571 772037 2118 - . alignment_id 0 ; Query GL50803_16141-t26_1-p1 ; Align 772038 1 1467 utg731_pilon exonerate:protein2genome:local gene 492341 497924 7594 - . gene_id 0 ; sequence GL50803_16143-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 497406 497924 . - . utg731_pilon exonerate:protein2genome:local exon 497406 497924 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 497404 497405 . - . intron_id 1 ; splice_site "GC" utg731_pilon exonerate:protein2genome:local intron 497373 497405 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 497373 497374 . - . intron_id 0 ; splice_site "TG" utg731_pilon exonerate:protein2genome:local cds 492341 497372 . - . utg731_pilon exonerate:protein2genome:local exon 492341 497372 . - . insertions 9 ; deletions 6 ; frameshifts 4 utg731_pilon exonerate:protein2genome:local similarity 492341 497924 7594 - . alignment_id 0 ; Query GL50803_16143-t26_1-p1 ; Align 497925 1 519 ; Align 497373 174 342 ; Align 497030 288 33 ; Align 496996 299 777 ; Align 496217 559 741 ; Align 495476 809 165 ; Align 495311 866 603 ; Align 494705 1067 2085 ; Align 492614 1762 273 utg99_pilon exonerate:protein2genome:local gene 290978 293359 2697 - . gene_id 0 ; sequence GL50803_16149-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 291865 293359 . - . utg99_pilon exonerate:protein2genome:local exon 291865 293359 . - . insertions 0 ; deletions 4 utg99_pilon exonerate:protein2genome:local splice5 291863 291864 . - . intron_id 1 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 291829 291864 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 291829 291830 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 290978 291828 . - . utg99_pilon exonerate:protein2genome:local exon 290978 291828 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 290978 293359 2697 - . alignment_id 0 ; Query GL50803_16149-t26_1-p1 ; Align 293360 1 1224 ; Align 292136 410 231 ; Align 291905 490 39 ; Align 291827 504 849 utg47_pilon exonerate:protein2genome:local gene 565982 569239 4196 + . gene_id 0 ; sequence GL50803_16152-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 565982 569239 . + . utg47_pilon exonerate:protein2genome:local exon 565982 569239 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 565982 569239 4196 + . alignment_id 0 ; Query GL50803_16152-t26_1-p1 ; Align 565982 1 3258 utg731_pilon exonerate:protein2genome:local gene 299688 300263 827 - . gene_id 0 ; sequence GL50803_16156-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 299688 300263 . - . utg731_pilon exonerate:protein2genome:local exon 299688 300263 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 299688 300263 827 - . alignment_id 0 ; Query GL50803_16156-t26_1-p1 ; Align 300264 1 576 utg731_pilon exonerate:protein2genome:local gene 297344 299656 3126 + . gene_id 0 ; sequence GL50803_16157-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 297344 299656 . + . utg731_pilon exonerate:protein2genome:local exon 297344 299656 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 297344 299656 3126 + . alignment_id 0 ; Query GL50803_16157-t26_1-p1 ; Align 297344 1 1059 ; Align 298403 355 714 ; Align 299117 594 540 utg731_pilon exonerate:protein2genome:local gene 289069 292446 4390 + . gene_id 0 ; sequence GL50803_16158-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 289069 292446 . + . utg731_pilon exonerate:protein2genome:local exon 289069 292446 . + . insertions 0 ; deletions 8 utg731_pilon exonerate:protein2genome:local similarity 289069 292446 4390 + . alignment_id 0 ; Query GL50803_16158-t26_1-p1 ; Align 289069 1 2118 ; Align 291187 712 18 ; Align 291205 721 1242 utg731_pilon exonerate:protein2genome:local gene 287790 288917 1486 + . gene_id 0 ; sequence GL50803_16159-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 287790 288917 . + . utg731_pilon exonerate:protein2genome:local exon 287790 288917 . + . insertions 3 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 287790 288917 1486 + . alignment_id 0 ; Query GL50803_16159-t26_1-p1 ; Align 287790 1 546 ; Align 288336 184 144 ; Align 288483 232 435 utg731_pilon exonerate:protein2genome:local gene 283211 284284 1480 + . gene_id 0 ; sequence GL50803_16160-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 283211 284284 . + . utg731_pilon exonerate:protein2genome:local exon 283211 284284 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 283211 284284 1480 + . alignment_id 0 ; Query GL50803_16160-t26_1-p1 ; Align 283211 1 174 ; Align 283385 61 900 utg265_pilon exonerate:protein2genome:local gene 649574 651724 3198 - . gene_id 0 ; sequence GL50803_16161-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 649574 651724 . - . utg265_pilon exonerate:protein2genome:local exon 649574 651724 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 649574 651724 3198 - . alignment_id 0 ; Query GL50803_16161-t26_1-p1 ; Align 651725 1 2151 utg265_pilon exonerate:protein2genome:local gene 651805 652317 711 - . gene_id 0 ; sequence GL50803_16162-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 651805 652317 . - . utg265_pilon exonerate:protein2genome:local exon 651805 652317 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 651805 652317 711 - . alignment_id 0 ; Query GL50803_16162-t26_1-p1 ; Align 652318 1 513 utg11_pilon exonerate:protein2genome:local gene 221349 387320 868 + . gene_id 0 ; sequence GL50803_16167-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 221349 221870 . + . utg11_pilon exonerate:protein2genome:local exon 221349 221870 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 221871 221872 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 221871 276339 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 276338 276339 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 276340 276723 . + . utg11_pilon exonerate:protein2genome:local exon 276340 276723 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 276724 276725 . + . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 276724 386044 . + . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 386043 386044 . + . intron_id 1 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 386045 386456 . + . utg11_pilon exonerate:protein2genome:local exon 386045 386456 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 386457 386458 . + . intron_id 3 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 386457 387096 . + . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 387095 387096 . + . intron_id 2 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 387097 387320 . + . utg11_pilon exonerate:protein2genome:local exon 387097 387320 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 221349 387320 868 + . alignment_id 0 ; Query GL50803_16167-t26_1-p1 ; Align 221349 21 384 ; Align 221733 150 138 ; Align 276340 196 384 ; Align 386045 324 411 ; Align 387099 462 222 utg47_pilon exonerate:protein2genome:local gene 2002762 2003793 1419 - . gene_id 0 ; sequence GL50803_16172-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2002762 2003793 . - . utg47_pilon exonerate:protein2genome:local exon 2002762 2003793 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2002762 2003793 1419 - . alignment_id 0 ; Query GL50803_16172-t26_1-p1 ; Align 2003794 1 1032 utg47_pilon exonerate:protein2genome:local gene 2009555 2010403 1434 - . gene_id 0 ; sequence GL50803_16173-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2009555 2010403 . - . utg47_pilon exonerate:protein2genome:local exon 2009555 2010403 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2009555 2010403 1434 - . alignment_id 0 ; Query GL50803_16173-t26_1-p1 ; Align 2010404 1 849 utg11_pilon exonerate:protein2genome:local gene 1422988 1424245 1842 - . gene_id 0 ; sequence GL50803_16180-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1422988 1424245 . - . utg11_pilon exonerate:protein2genome:local exon 1422988 1424245 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 1422988 1424245 1842 - . alignment_id 0 ; Query GL50803_16180-t26_1-p1 ; Align 1424246 1 123 ; Align 1424122 42 1134 utg18_pilon exonerate:protein2genome:local gene 194879 196732 2221 - . gene_id 0 ; sequence GL50803_16184-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 194879 196732 . - . utg18_pilon exonerate:protein2genome:local exon 194879 196732 . - . insertions 0 ; deletions 4 utg18_pilon exonerate:protein2genome:local similarity 194879 196732 2221 - . alignment_id 0 ; Query GL50803_16184-t26_1-p1 ; Align 196733 1 450 ; Align 196283 155 1404 utg308_pilon exonerate:protein2genome:local gene 421549 423654 3003 - . gene_id 0 ; sequence GL50803_16188-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 421549 423654 . - . utg308_pilon exonerate:protein2genome:local exon 421549 423654 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 421549 423654 3003 - . alignment_id 0 ; Query GL50803_16188-t26_1-p1 ; Align 423655 1 2106 utg212_pilon exonerate:protein2genome:local gene 132055 133845 2677 - . gene_id 0 ; sequence GL50803_16192-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 132055 133845 . - . utg212_pilon exonerate:protein2genome:local exon 132055 133845 . - . insertions 0 ; deletions 4 utg212_pilon exonerate:protein2genome:local similarity 132055 133845 2677 - . alignment_id 0 ; Query GL50803_16192-t26_1-p1 ; Align 133846 1 789 ; Align 133057 268 1002 utg47_pilon exonerate:protein2genome:local gene 819633 822223 3703 + . gene_id 0 ; sequence GL50803_16194-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 819633 822223 . + . utg47_pilon exonerate:protein2genome:local exon 819633 822223 . + . insertions 3 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 819633 822223 3703 + . alignment_id 0 ; Query GL50803_16194-t26_1-p1 ; Align 819633 1 549 ; Align 820185 184 210 ; Align 820397 255 1827 utg349_pilon exonerate:protein2genome:local gene 328088 331438 4624 + . gene_id 0 ; sequence GL50803_16199-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 328088 331438 . + . utg349_pilon exonerate:protein2genome:local exon 328088 331438 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 328088 331438 4624 + . alignment_id 0 ; Query GL50803_16199-t26_1-p1 ; Align 328088 1 3351 utg349_pilon exonerate:protein2genome:local gene 320830 321948 1863 + . gene_id 0 ; sequence GL50803_16200-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 320830 321948 . + . utg349_pilon exonerate:protein2genome:local exon 320830 321948 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 320830 321948 1863 + . alignment_id 0 ; Query GL50803_16200-t26_1-p1 ; Align 320830 1 1119 utg349_pilon exonerate:protein2genome:local gene 313959 315464 2492 + . gene_id 0 ; sequence GL50803_16202-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 313959 315464 . + . utg349_pilon exonerate:protein2genome:local exon 313959 315464 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 313959 315464 2492 + . alignment_id 0 ; Query GL50803_16202-t26_1-p1 ; Align 313959 1 1506 utg99_pilon exonerate:protein2genome:local gene 299529 301448 2754 + . gene_id 0 ; sequence GL50803_16205-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 299529 301448 . + . utg99_pilon exonerate:protein2genome:local exon 299529 301448 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 299529 301448 2754 + . alignment_id 0 ; Query GL50803_16205-t26_1-p1 ; Align 299529 1 1920 utg349_pilon exonerate:protein2genome:local gene 1546790 1549576 4109 - . gene_id 0 ; sequence GL50803_16214-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1546790 1549576 . - . utg349_pilon exonerate:protein2genome:local exon 1546790 1549576 . - . insertions 6 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1546790 1549576 4109 - . alignment_id 0 ; Query GL50803_16214-t26_1-p1 ; Align 1549577 1 2544 ; Align 1547027 849 237 utg349_pilon exonerate:protein2genome:local gene 1544105 1546699 3132 - . gene_id 0 ; sequence GL50803_16215-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1544105 1546699 . - . utg349_pilon exonerate:protein2genome:local exon 1544105 1546699 . - . insertions 6 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 1544105 1546699 3132 - . alignment_id 0 ; Query GL50803_16215-t26_1-p1 ; Align 1546700 1 939 ; Align 1545755 314 348 ; Align 1545407 431 174 ; Align 1545233 493 36 ; Align 1545197 506 1092 utg349_pilon exonerate:protein2genome:local gene 682029 683330 1853 - . gene_id 0 ; sequence GL50803_16217-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 682029 683330 . - . utg349_pilon exonerate:protein2genome:local exon 682029 683330 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 682029 683330 1853 - . alignment_id 0 ; Query GL50803_16217-t26_1-p1 ; Align 683331 1 1302 utg47_pilon exonerate:protein2genome:local gene 1898994 1900940 2887 + . gene_id 0 ; sequence GL50803_16220-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1898994 1900940 . + . utg47_pilon exonerate:protein2genome:local exon 1898994 1900940 . + . insertions 9 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1898994 1900940 2887 + . alignment_id 0 ; Query GL50803_16220-t26_1-p1 ; Align 1898994 1 1641 ; Align 1900644 548 297 utg11_pilon exonerate:protein2genome:local gene 1127001 1279509 3363 + . gene_id 0 ; sequence GL50803_16222-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1127001 1129703 . + . utg11_pilon exonerate:protein2genome:local exon 1127001 1129703 . + . insertions 18 ; deletions 7 utg11_pilon exonerate:protein2genome:local splice5 1129704 1129705 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1129704 1279446 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1279445 1279446 . + . intron_id 0 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local cds 1279447 1279509 . + . utg11_pilon exonerate:protein2genome:local exon 1279447 1279509 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1127001 1279509 3363 + . alignment_id 0 ; Query GL50803_16222-t26_1-p1 ; Align 1127001 778 1497 ; Align 1128501 1277 276 ; Align 1128780 1369 99 ; Align 1128888 1402 273 ; Align 1129161 1494 300 ; Align 1129464 1594 75 ; Align 1129539 1624 51 ; Align 1129590 1642 114 ; Align 1279447 1680 63 utg11_pilon exonerate:protein2genome:local gene 1132246 1137471 8097 - . gene_id 0 ; sequence GL50803_16223-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1132246 1137471 . - . utg11_pilon exonerate:protein2genome:local exon 1132246 1137471 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1132246 1137471 8097 - . alignment_id 0 ; Query GL50803_16223-t26_1-p1 ; Align 1137472 1 4515 ; Align 1132954 1506 708 utg11_pilon exonerate:protein2genome:local gene 1138120 1140837 3603 + . gene_id 0 ; sequence GL50803_16224-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1138120 1140837 . + . utg11_pilon exonerate:protein2genome:local exon 1138120 1140837 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1138120 1140837 3603 + . alignment_id 0 ; Query GL50803_16224-t26_1-p1 ; Align 1138120 1 1518 ; Align 1139641 507 1197 utg11_pilon exonerate:protein2genome:local gene 1140844 1143763 3516 - . gene_id 0 ; sequence GL50803_16225-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1141129 1143763 . - . utg11_pilon exonerate:protein2genome:local exon 1141129 1143763 . - . insertions 12 ; deletions 1 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local splice5 1141127 1141128 . - . intron_id 1 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 1141099 1141128 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1141099 1141100 . - . intron_id 0 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local cds 1140844 1141098 . - . utg11_pilon exonerate:protein2genome:local exon 1140844 1141098 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1140844 1143763 3516 - . alignment_id 0 ; Query GL50803_16225-t26_1-p1 ; Align 1143764 1 1185 ; Align 1142578 396 486 ; Align 1142080 558 822 ; Align 1141258 833 129 ; Align 1141099 876 255 utg11_pilon exonerate:protein2genome:local gene 1143822 1146824 3895 + . gene_id 0 ; sequence GL50803_16226-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1143822 1145000 . + . utg11_pilon exonerate:protein2genome:local exon 1143822 1145000 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1145001 1145002 . + . intron_id 1 ; splice_site "CA" utg11_pilon exonerate:protein2genome:local intron 1145001 1145093 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1145092 1145093 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1145094 1146824 . + . utg11_pilon exonerate:protein2genome:local exon 1145094 1146824 . + . insertions 3 ; deletions 7 utg11_pilon exonerate:protein2genome:local similarity 1143822 1146824 3895 + . alignment_id 0 ; Query GL50803_16226-t26_1-p1 ; Align 1143822 1 864 ; Align 1144686 290 315 ; Align 1145094 395 75 ; Align 1145169 421 84 ; Align 1145253 450 324 ; Align 1145577 559 321 ; Align 1145901 666 45 ; Align 1145946 682 621 ; Align 1146567 892 258 utg11_pilon exonerate:protein2genome:local gene 1146868 1148322 2333 + . gene_id 0 ; sequence GL50803_16227-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1146868 1148322 . + . utg11_pilon exonerate:protein2genome:local exon 1146868 1148322 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1146868 1148322 2333 + . alignment_id 0 ; Query GL50803_16227-t26_1-p1 ; Align 1146868 1 1455 utg11_pilon exonerate:protein2genome:local gene 1148436 1149191 1130 + . gene_id 0 ; sequence GL50803_16228-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1148436 1149191 . + . utg11_pilon exonerate:protein2genome:local exon 1148436 1149191 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1148436 1149191 1130 + . alignment_id 0 ; Query GL50803_16228-t26_1-p1 ; Align 1148436 1 756 utg18_pilon exonerate:protein2genome:local gene 56180 59008 3329 + . gene_id 0 ; sequence GL50803_16230-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 56180 58273 . + . utg18_pilon exonerate:protein2genome:local exon 56180 58273 . + . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local splice5 58274 58275 . + . intron_id 1 ; splice_site "AT" utg18_pilon exonerate:protein2genome:local intron 58274 58355 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 58354 58355 . + . intron_id 0 ; splice_site "TC" utg18_pilon exonerate:protein2genome:local cds 58356 58451 . + . utg18_pilon exonerate:protein2genome:local exon 58356 58451 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 58452 58453 . + . intron_id 2 ; splice_site "AT" utg18_pilon exonerate:protein2genome:local intron 58452 58539 . + . intron_id 2 utg18_pilon exonerate:protein2genome:local splice3 58538 58539 . + . intron_id 1 ; splice_site "AT" utg18_pilon exonerate:protein2genome:local cds 58540 59008 . + . utg18_pilon exonerate:protein2genome:local exon 58540 59008 . + . insertions 0 ; deletions 2 ; frameshifts 4 utg18_pilon exonerate:protein2genome:local similarity 56180 59008 3329 + . alignment_id 0 ; Query GL50803_16230-t26_1-p1 ; Align 56180 1 1491 ; Align 57671 500 603 ; Align 58356 701 96 ; Align 58540 733 72 ; Align 58614 757 72 ; Align 58688 781 24 ; Align 58712 791 297 utg212_pilon exonerate:protein2genome:local gene 34772 36715 2647 + . gene_id 0 ; sequence GL50803_16232-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 34772 36715 . + . utg212_pilon exonerate:protein2genome:local exon 34772 36715 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 34772 36715 2647 + . alignment_id 0 ; Query GL50803_16232-t26_1-p1 ; Align 34772 9 1944 utg212_pilon exonerate:protein2genome:local gene 36727 37365 558 - . gene_id 0 ; sequence GL50803_16233-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 36727 37365 . - . utg212_pilon exonerate:protein2genome:local exon 36727 37365 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 36727 37365 558 - . alignment_id 0 ; Query GL50803_16233-t26_1-p1 ; Align 37366 1 639 utg212_pilon exonerate:protein2genome:local gene 31065 31577 799 - . gene_id 0 ; sequence GL50803_16234-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 31065 31577 . - . utg212_pilon exonerate:protein2genome:local exon 31065 31577 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 31065 31577 799 - . alignment_id 0 ; Query GL50803_16234-t26_1-p1 ; Align 31578 1 513 utg212_pilon exonerate:protein2genome:local gene 29835 30989 1730 - . gene_id 0 ; sequence GL50803_16235-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 29835 30989 . - . utg212_pilon exonerate:protein2genome:local exon 29835 30989 . - . insertions 0 ; deletions 0 ; frameshifts 6 utg212_pilon exonerate:protein2genome:local similarity 29835 30989 1730 - . alignment_id 0 ; Query GL50803_16235-t26_1-p1 ; Align 30990 21 75 ; Align 30910 46 51 ; Align 30858 63 1023 utg212_pilon exonerate:protein2genome:local gene 28294 28599 458 - . gene_id 0 ; sequence GL50803_16236-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 28294 28599 . - . utg212_pilon exonerate:protein2genome:local exon 28294 28599 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 28294 28599 458 - . alignment_id 0 ; Query GL50803_16236-t26_1-p1 ; Align 28600 1 306 utg212_pilon exonerate:protein2genome:local gene 22889 24919 3240 - . gene_id 0 ; sequence GL50803_16237-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 22889 24919 . - . utg212_pilon exonerate:protein2genome:local exon 22889 24919 . - . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local similarity 22889 24919 3240 - . alignment_id 0 ; Query GL50803_16237-t26_1-p1 ; Align 24920 1 96 ; Align 24824 34 1935 utg64_pilon exonerate:protein2genome:local gene 635775 636914 1745 + . gene_id 0 ; sequence GL50803_16240-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 635775 636914 . + . utg64_pilon exonerate:protein2genome:local exon 635775 636914 . + . insertions 0 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 635775 636914 1745 + . alignment_id 0 ; Query GL50803_16240-t26_1-p1 ; Align 635775 1 927 ; Align 636702 314 213 utg308_pilon exonerate:protein2genome:local gene 628785 629534 1139 - . gene_id 0 ; sequence GL50803_16245-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 628785 629534 . - . utg308_pilon exonerate:protein2genome:local exon 628785 629534 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 628785 629534 1139 - . alignment_id 0 ; Query GL50803_16245-t26_1-p1 ; Align 629535 1 750 utg308_pilon exonerate:protein2genome:local gene 629555 631476 2318 + . gene_id 0 ; sequence GL50803_16246-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 629555 631476 . + . utg308_pilon exonerate:protein2genome:local exon 629555 631476 . + . insertions 0 ; deletions 3 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 629555 631476 2318 + . alignment_id 0 ; Query GL50803_16246-t26_1-p1 ; Align 629555 1 174 ; Align 629731 60 843 ; Align 630574 343 903 utg308_pilon exonerate:protein2genome:local gene 634180 636453 3147 - . gene_id 0 ; sequence GL50803_16247-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 634180 636453 . - . utg308_pilon exonerate:protein2genome:local exon 634180 636453 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 634180 636453 3147 - . alignment_id 0 ; Query GL50803_16247-t26_1-p1 ; Align 636454 1 384 ; Align 636067 129 1887 utg18_pilon exonerate:protein2genome:local gene 26511 28622 2732 - . gene_id 0 ; sequence GL50803_16251-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 26511 28622 . - . utg18_pilon exonerate:protein2genome:local exon 26511 28622 . - . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 26511 28622 2732 - . alignment_id 0 ; Query GL50803_16251-t26_1-p1 ; Align 28623 1 1566 ; Align 27057 525 546 utg349_pilon exonerate:protein2genome:local gene 961908 1080174 2343 + . gene_id 0 ; sequence GL50803_16256-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 961908 961995 . + . utg349_pilon exonerate:protein2genome:local exon 961908 961995 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 961996 961997 . + . intron_id 1 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 961996 1078615 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1078614 1078615 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1078616 1080174 . + . utg349_pilon exonerate:protein2genome:local exon 1078616 1080174 . + . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 961908 1080174 2343 + . alignment_id 0 ; Query GL50803_16256-t26_1-p1 ; Align 961908 500 87 ; Align 1078618 530 738 ; Align 1079356 777 42 ; Align 1079398 793 777 utg47_pilon exonerate:protein2genome:local gene 454589 454907 485 + . gene_id 0 ; sequence GL50803_16263-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 454589 454907 . + . utg47_pilon exonerate:protein2genome:local exon 454589 454907 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 454589 454907 485 + . alignment_id 0 ; Query GL50803_16263-t26_1-p1 ; Align 454589 1 42 ; Align 454632 15 276 utg47_pilon exonerate:protein2genome:local gene 458829 461944 4330 - . gene_id 0 ; sequence GL50803_16264-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 458829 461944 . - . utg47_pilon exonerate:protein2genome:local exon 458829 461944 . - . insertions 0 ; deletions 3 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 458829 461944 4330 - . alignment_id 0 ; Query GL50803_16264-t26_1-p1 ; Align 461945 1 1407 ; Align 460537 470 678 ; Align 459858 696 639 ; Align 459219 912 390 utg47_pilon exonerate:protein2genome:local gene 462050 462790 1229 - . gene_id 0 ; sequence GL50803_16265-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 462050 462790 . - . utg47_pilon exonerate:protein2genome:local exon 462050 462790 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 462050 462790 1229 - . alignment_id 0 ; Query GL50803_16265-t26_1-p1 ; Align 462791 1 741 utg47_pilon exonerate:protein2genome:local gene 477366 478565 1499 - . gene_id 0 ; sequence GL50803_16266-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 477366 478565 . - . utg47_pilon exonerate:protein2genome:local exon 477366 478565 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 477366 478565 1499 - . alignment_id 0 ; Query GL50803_16266-t26_1-p1 ; Align 478566 1 318 ; Align 478248 108 687 ; Align 477561 339 195 utg47_pilon exonerate:protein2genome:local gene 480580 482193 2491 + . gene_id 0 ; sequence GL50803_16267-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 480580 482193 . + . utg47_pilon exonerate:protein2genome:local exon 480580 482193 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 480580 482193 2491 + . alignment_id 0 ; Query GL50803_16267-t26_1-p1 ; Align 480580 1 1506 ; Align 482089 503 105 utg349_pilon exonerate:protein2genome:local gene 731444 733066 1871 - . gene_id 0 ; sequence GL50803_16269-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 731444 733066 . - . utg349_pilon exonerate:protein2genome:local exon 731444 733066 . - . insertions 0 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 731444 733066 1871 - . alignment_id 0 ; Query GL50803_16269-t26_1-p1 ; Align 733067 1 1110 ; Align 731957 374 102 ; Align 731855 409 273 ; Align 731582 501 138 utg349_pilon exonerate:protein2genome:local gene 726256 727611 1614 - . gene_id 0 ; sequence GL50803_16271-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 726256 727611 . - . utg349_pilon exonerate:protein2genome:local exon 726256 727611 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 726256 727611 1614 - . alignment_id 0 ; Query GL50803_16271-t26_1-p1 ; Align 727612 1 108 ; Align 727504 38 1248 utg349_pilon exonerate:protein2genome:local gene 722065 725763 5790 + . gene_id 0 ; sequence GL50803_16272-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 722065 725763 . + . utg349_pilon exonerate:protein2genome:local exon 722065 725763 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 722065 725763 5790 + . alignment_id 0 ; Query GL50803_16272-t26_1-p1 ; Align 722065 1 3699 utg349_pilon exonerate:protein2genome:local gene 715200 722045 9821 + . gene_id 0 ; sequence GL50803_16273-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 715200 722045 . + . utg349_pilon exonerate:protein2genome:local exon 715200 722045 . + . insertions 0 ; deletions 10 utg349_pilon exonerate:protein2genome:local similarity 715200 722045 9821 + . alignment_id 0 ; Query GL50803_16273-t26_1-p1 ; Align 715200 1 1539 ; Align 716739 515 783 ; Align 717522 777 1134 ; Align 718656 1156 114 ; Align 718770 1195 1881 ; Align 720651 1824 1149 ; Align 721800 2211 246 utg265_pilon exonerate:protein2genome:local gene 55870 57852 2828 + . gene_id 0 ; sequence GL50803_16279-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 55870 57852 . + . utg265_pilon exonerate:protein2genome:local exon 55870 57852 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 55870 57852 2828 + . alignment_id 0 ; Query GL50803_16279-t26_1-p1 ; Align 55870 1 1983 utg265_pilon exonerate:protein2genome:local gene 39584 41395 2630 + . gene_id 0 ; sequence GL50803_16283-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 39584 41395 . + . utg265_pilon exonerate:protein2genome:local exon 39584 41395 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 39584 41395 2630 + . alignment_id 0 ; Query GL50803_16283-t26_1-p1 ; Align 39584 1 1812 utg731_pilon exonerate:protein2genome:local gene 1508728 1510287 2293 - . gene_id 0 ; sequence GL50803_16285-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1508728 1510287 . - . utg731_pilon exonerate:protein2genome:local exon 1508728 1510287 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1508728 1510287 2293 - . alignment_id 0 ; Query GL50803_16285-t26_1-p1 ; Align 1510288 1 1560 utg731_pilon exonerate:protein2genome:local gene 1505402 1508554 4274 + . gene_id 0 ; sequence GL50803_16286-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1505402 1508554 . + . utg731_pilon exonerate:protein2genome:local exon 1505402 1508554 . + . insertions 18 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1505402 1508554 4274 + . alignment_id 0 ; Query GL50803_16286-t26_1-p1 ; Align 1505402 1 720 ; Align 1506131 241 165 ; Align 1506305 296 1314 ; Align 1507619 735 936 utg731_pilon exonerate:protein2genome:local gene 1601468 1603951 3699 - . gene_id 0 ; sequence GL50803_16287-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1601468 1603951 . - . utg731_pilon exonerate:protein2genome:local exon 1601468 1603951 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1601468 1603951 3699 - . alignment_id 0 ; Query GL50803_16287-t26_1-p1 ; Align 1603952 37 2484 utg731_pilon exonerate:protein2genome:local gene 1604046 1605240 1386 - . gene_id 0 ; sequence GL50803_16288-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1604046 1605240 . - . utg731_pilon exonerate:protein2genome:local exon 1604046 1605240 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 1604046 1605240 1386 - . alignment_id 0 ; Query GL50803_16288-t26_1-p1 ; Align 1605241 1 915 ; Align 1604325 306 258 ; Align 1604067 393 21 utg731_pilon exonerate:protein2genome:local gene 1605828 1607736 2459 - . gene_id 0 ; sequence GL50803_16289-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1605828 1607736 . - . utg731_pilon exonerate:protein2genome:local exon 1605828 1607736 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 1605828 1607736 2459 - . alignment_id 0 ; Query GL50803_16289-t26_1-p1 ; Align 1607737 2 45 ; Align 1607691 17 1863 utg308_pilon exonerate:protein2genome:local gene 978802 980370 1960 - . gene_id 0 ; sequence GL50803_16293-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 978802 980370 . - . utg308_pilon exonerate:protein2genome:local exon 978802 980370 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 978802 980370 1960 - . alignment_id 0 ; Query GL50803_16293-t26_1-p1 ; Align 980371 5 1569 utg99_pilon exonerate:protein2genome:local gene 168754 169436 706 - . gene_id 0 ; sequence GL50803_16297-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 168754 169436 . - . utg99_pilon exonerate:protein2genome:local exon 168754 169436 . - . insertions 0 ; deletions 1 ; frameshifts 5 utg99_pilon exonerate:protein2genome:local similarity 168754 169436 706 - . alignment_id 0 ; Query GL50803_16297-t26_1-p1 ; Align 169437 2 108 ; Align 169324 38 57 ; Align 169267 58 513 utg99_pilon exonerate:protein2genome:local gene 169373 169783 675 + . gene_id 0 ; sequence GL50803_16298-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 169373 169783 . + . utg99_pilon exonerate:protein2genome:local exon 169373 169783 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 169373 169783 675 + . alignment_id 0 ; Query GL50803_16298-t26_1-p1 ; Align 169373 1 411 utg99_pilon exonerate:protein2genome:local gene 170406 172964 3644 - . gene_id 0 ; sequence GL50803_16299-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 170406 172964 . - . utg99_pilon exonerate:protein2genome:local exon 170406 172964 . - . insertions 0 ; deletions 10 utg99_pilon exonerate:protein2genome:local similarity 170406 172964 3644 - . alignment_id 0 ; Query GL50803_16299-t26_1-p1 ; Align 172965 1 1530 ; Align 171435 512 27 ; Align 171408 523 72 ; Align 171336 548 408 ; Align 170928 686 33 ; Align 170895 700 87 ; Align 170808 730 402 utg99_pilon exonerate:protein2genome:local gene 176562 178982 2775 + . gene_id 0 ; sequence GL50803_16300-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 176562 178982 . + . utg99_pilon exonerate:protein2genome:local exon 176562 178982 . + . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 176562 178982 2775 + . alignment_id 0 ; Query GL50803_16300-t26_1-p1 ; Align 176562 258 111 ; Align 176673 296 2310 utg265_pilon exonerate:protein2genome:local gene 144390 146982 3273 - . gene_id 0 ; sequence GL50803_16307-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 144390 146982 . - . utg265_pilon exonerate:protein2genome:local exon 144390 146982 . - . insertions 6 ; deletions 2 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 144390 146982 3273 - . alignment_id 0 ; Query GL50803_16307-t26_1-p1 ; Align 146983 39 879 ; Align 146103 332 231 ; Align 145869 409 780 ; Align 145086 669 276 ; Align 144810 763 420 utg99_pilon exonerate:protein2genome:local gene 34280 34726 779 + . gene_id 0 ; sequence GL50803_16310-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 34280 34726 . + . utg99_pilon exonerate:protein2genome:local exon 34280 34726 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 34280 34726 779 + . alignment_id 0 ; Query GL50803_16310-t26_1-p1 ; Align 34280 1 447 utg99_pilon exonerate:protein2genome:local gene 32934 34193 2059 + . gene_id 0 ; sequence GL50803_16311-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 32934 34193 . + . utg99_pilon exonerate:protein2genome:local exon 32934 34193 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 32934 34193 2059 + . alignment_id 0 ; Query GL50803_16311-t26_1-p1 ; Align 32934 1 1260 utg99_pilon exonerate:protein2genome:local gene 28831 31775 3764 - . gene_id 0 ; sequence GL50803_16312-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 28831 31775 . - . utg99_pilon exonerate:protein2genome:local exon 28831 31775 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg99_pilon exonerate:protein2genome:local similarity 28831 31775 3764 - . alignment_id 0 ; Query GL50803_16312-t26_1-p1 ; Align 31776 1 687 ; Align 31088 230 312 ; Align 30775 334 1944 utg99_pilon exonerate:protein2genome:local gene 17460 19202 2821 - . gene_id 0 ; sequence GL50803_16313-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 17460 19202 . - . utg99_pilon exonerate:protein2genome:local exon 17460 19202 . - . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 17460 19202 2821 - . alignment_id 0 ; Query GL50803_16313-t26_1-p1 ; Align 19203 1 1350 ; Align 17850 451 390 utg265_pilon exonerate:protein2genome:local gene 102966 105730 2092 - . gene_id 0 ; sequence GL50803_16315-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 102966 105730 . - . utg265_pilon exonerate:protein2genome:local exon 102966 105730 . - . insertions 18 ; deletions 4 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 102966 105730 2092 - . alignment_id 0 ; Query GL50803_16315-t26_1-p1 ; Align 105731 176 864 ; Align 104867 467 723 ; Align 104142 708 6 ; Align 104136 711 396 ; Align 103734 843 51 ; Align 103671 860 705 utg265_pilon exonerate:protein2genome:local gene 117001 126131 12689 + . gene_id 0 ; sequence GL50803_16317-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 117001 126131 . + . utg265_pilon exonerate:protein2genome:local exon 117001 126131 . + . insertions 6 ; deletions 4 ; frameshifts 5 utg265_pilon exonerate:protein2genome:local similarity 117001 126131 12689 + . alignment_id 0 ; Query GL50803_16317-t26_1-p1 ; Align 117001 1 765 ; Align 117767 256 1272 ; Align 119039 682 1074 ; Align 120114 1040 3 ; Align 120117 1042 840 ; Align 120959 1323 990 ; Align 121950 1653 2733 ; Align 124689 2564 1443 utg47_pilon exonerate:protein2genome:local gene 1866860 2064800 8602 + . gene_id 0 ; sequence GL50803_16318-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1866860 1868460 . + . utg47_pilon exonerate:protein2genome:local exon 1866860 1868460 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1868461 1868462 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1868461 2060176 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 2060175 2060176 . + . intron_id 0 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 2060177 2064800 . + . utg47_pilon exonerate:protein2genome:local exon 2060177 2064800 . + . insertions 27 ; deletions 8 utg47_pilon exonerate:protein2genome:local similarity 1866860 2064800 8602 + . alignment_id 0 ; Query GL50803_16318-t26_1-p1 ; Align 1866860 1 1485 ; Align 1868345 497 93 ; Align 1868438 529 21 ; Align 2060178 537 444 ; Align 2060625 685 642 ; Align 2061276 899 60 ; Align 2061336 924 330 ; Align 2061675 1034 1272 ; Align 2062947 1459 1086 ; Align 2064036 1821 168 ; Align 2064204 1879 366 ; Align 2064573 2001 228 utg265_pilon exonerate:protein2genome:local gene 537663 544135 8361 - . gene_id 0 ; sequence GL50803_16321-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 537663 544135 . - . utg265_pilon exonerate:protein2genome:local exon 537663 544135 . - . insertions 6 ; deletions 4 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 537663 544135 8361 - . alignment_id 0 ; Query GL50803_16321-t26_1-p1 ; Align 544136 474 282 ; Align 543851 568 3492 ; Align 540359 1733 249 ; Align 540110 1817 405 ; Align 539705 1953 1182 ; Align 538520 2347 516 ; Align 538002 2520 339 utg265_pilon exonerate:protein2genome:local gene 545623 547395 2700 + . gene_id 0 ; sequence GL50803_16322-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 545623 547395 . + . utg265_pilon exonerate:protein2genome:local exon 545623 547395 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 545623 547395 2700 + . alignment_id 0 ; Query GL50803_16322-t26_1-p1 ; Align 545623 1 1773 utg349_pilon exonerate:protein2genome:local gene 1606092 1608305 3012 - . gene_id 0 ; sequence GL50803_16326-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1606092 1608305 . - . utg349_pilon exonerate:protein2genome:local exon 1606092 1608305 . - . insertions 9 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1606092 1608305 3012 - . alignment_id 0 ; Query GL50803_16326-t26_1-p1 ; Align 1608306 24 495 ; Align 1607802 189 1710 utg349_pilon exonerate:protein2genome:local gene 1614672 1616369 2663 - . gene_id 0 ; sequence GL50803_16328-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1614672 1616369 . - . utg349_pilon exonerate:protein2genome:local exon 1614672 1616369 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1614672 1616369 2663 - . alignment_id 0 ; Query GL50803_16328-t26_1-p1 ; Align 1616370 3 1698 utg18_pilon exonerate:protein2genome:local gene 397767 402972 6803 - . gene_id 0 ; sequence GL50803_16332-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 397767 402972 . - . utg18_pilon exonerate:protein2genome:local exon 397767 402972 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg18_pilon exonerate:protein2genome:local similarity 397767 402972 6803 - . alignment_id 0 ; Query GL50803_16332-t26_1-p1 ; Align 402973 1 1230 ; Align 401743 412 3 ; Align 401739 413 3972 utg47_pilon exonerate:protein2genome:local gene 988710 992456 5061 + . gene_id 0 ; sequence GL50803_16339-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 988710 992456 . + . utg47_pilon exonerate:protein2genome:local exon 988710 992456 . + . insertions 15 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 988710 992456 5061 + . alignment_id 0 ; Query GL50803_16339-t26_1-p1 ; Align 988710 1 408 ; Align 989130 137 2079 ; Align 991212 830 1245 utg265_pilon exonerate:protein2genome:local gene 73665 78614 6239 + . gene_id 0 ; sequence GL50803_16342-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 73665 78614 . + . utg265_pilon exonerate:protein2genome:local exon 73665 78614 . + . insertions 9 ; deletions 5 utg265_pilon exonerate:protein2genome:local similarity 73665 78614 6239 + . alignment_id 0 ; Query GL50803_16342-t26_1-p1 ; Align 73665 1 711 ; Align 74379 238 24 ; Align 74409 246 3195 ; Align 77604 1316 1011 utg265_pilon exonerate:protein2genome:local gene 70999 73569 4064 - . gene_id 0 ; sequence GL50803_16343-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 70999 73569 . - . utg265_pilon exonerate:protein2genome:local exon 70999 73569 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 70999 73569 4064 - . alignment_id 0 ; Query GL50803_16343-t26_1-p1 ; Align 73570 1 2571 utg47_pilon exonerate:protein2genome:local gene 1625241 1626332 1306 - . gene_id 0 ; sequence GL50803_16348-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1625241 1626332 . - . utg47_pilon exonerate:protein2genome:local exon 1625241 1626332 . - . insertions 12 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1625241 1626332 1306 - . alignment_id 0 ; Query GL50803_16348-t26_1-p1 ; Align 1626333 1 798 ; Align 1625535 268 156 ; Align 1625367 320 126 utg349_pilon exonerate:protein2genome:local gene 867012 868433 2011 - . gene_id 0 ; sequence GL50803_16350-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 867012 868433 . - . utg349_pilon exonerate:protein2genome:local exon 867012 868433 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 867012 868433 2011 - . alignment_id 0 ; Query GL50803_16350-t26_1-p1 ; Align 868434 1 1422 utg349_pilon exonerate:protein2genome:local gene 860751 863384 2922 - . gene_id 0 ; sequence GL50803_16351-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 862352 863384 . - . utg349_pilon exonerate:protein2genome:local exon 862352 863384 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 862350 862351 . - . intron_id 1 ; splice_site "CT" utg349_pilon exonerate:protein2genome:local intron 862319 862351 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 862319 862320 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 860751 862318 . - . utg349_pilon exonerate:protein2genome:local exon 860751 862318 . - . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 860751 863384 2922 - . alignment_id 0 ; Query GL50803_16351-t26_1-p1 ; Align 863385 675 732 ; Align 862653 920 300 ; Align 862317 1021 15 ; Align 862302 1028 1551 utg47_pilon exonerate:protein2genome:local gene 1092707 1094980 3340 - . gene_id 0 ; sequence GL50803_16353-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1092707 1094980 . - . utg47_pilon exonerate:protein2genome:local exon 1092707 1094980 . - . insertions 12 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1092707 1094980 3340 - . alignment_id 0 ; Query GL50803_16353-t26_1-p1 ; Align 1094981 1 627 ; Align 1094354 211 1248 ; Align 1093103 627 165 ; Align 1092929 682 222 utg47_pilon exonerate:protein2genome:local gene 1084902 1087028 2841 + . gene_id 0 ; sequence GL50803_16354-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1084902 1087028 . + . utg47_pilon exonerate:protein2genome:local exon 1084902 1087028 . + . insertions 0 ; deletions 9 utg47_pilon exonerate:protein2genome:local similarity 1084902 1087028 2841 + . alignment_id 0 ; Query GL50803_16354-t26_1-p1 ; Align 1084902 1 954 ; Align 1085856 322 468 ; Align 1086324 483 87 ; Align 1086411 513 618 utg47_pilon exonerate:protein2genome:local gene 1081870 1084878 3667 + . gene_id 0 ; sequence GL50803_16355-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1081870 1084878 . + . utg47_pilon exonerate:protein2genome:local exon 1081870 1084878 . + . insertions 3 ; deletions 7 utg47_pilon exonerate:protein2genome:local similarity 1081870 1084878 3667 + . alignment_id 0 ; Query GL50803_16355-t26_1-p1 ; Align 1081870 1 759 ; Align 1082632 254 342 ; Align 1082974 371 144 ; Align 1083118 420 696 ; Align 1083814 655 1065 utg47_pilon exonerate:protein2genome:local gene 1077312 1079057 2431 - . gene_id 0 ; sequence GL50803_16356-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1077312 1079057 . - . utg47_pilon exonerate:protein2genome:local exon 1077312 1079057 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1077312 1079057 2431 - . alignment_id 0 ; Query GL50803_16356-t26_1-p1 ; Align 1079058 1 1746 utg47_pilon exonerate:protein2genome:local gene 1075307 1075757 552 + . gene_id 0 ; sequence GL50803_16357-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1075307 1075757 . + . utg47_pilon exonerate:protein2genome:local exon 1075307 1075757 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1075307 1075757 552 + . alignment_id 0 ; Query GL50803_16357-t26_1-p1 ; Align 1075307 14 375 ; Align 1075683 139 75 utg47_pilon exonerate:protein2genome:local gene 1103326 1103513 201 + . gene_id 0 ; sequence GL50803_1636-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1103326 1103513 . + . utg47_pilon exonerate:protein2genome:local exon 1103326 1103513 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1103326 1103513 201 + . alignment_id 0 ; Query GL50803_1636-t26_1-p1 ; Align 1103326 1 90 ; Align 1103418 31 9 ; Align 1103427 35 87 utg99_pilon exonerate:protein2genome:local gene 135417 136853 2389 - . gene_id 0 ; sequence GL50803_16363-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 135417 136853 . - . utg99_pilon exonerate:protein2genome:local exon 135417 136853 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 135417 136853 2389 - . alignment_id 0 ; Query GL50803_16363-t26_1-p1 ; Align 136854 1 1437 utg99_pilon exonerate:protein2genome:local gene 139048 141264 2990 - . gene_id 0 ; sequence GL50803_16364-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 139048 141264 . - . utg99_pilon exonerate:protein2genome:local exon 139048 141264 . - . insertions 0 ; deletions 3 utg99_pilon exonerate:protein2genome:local similarity 139048 141264 2990 - . alignment_id 0 ; Query GL50803_16364-t26_1-p1 ; Align 141265 1 2061 ; Align 139204 690 81 ; Align 139123 718 75 utg99_pilon exonerate:protein2genome:local gene 142606 146298 4493 + . gene_id 0 ; sequence GL50803_16365-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 142606 146298 . + . utg99_pilon exonerate:protein2genome:local exon 142606 146298 . + . insertions 21 ; deletions 12 utg99_pilon exonerate:protein2genome:local similarity 142606 146298 4493 + . alignment_id 0 ; Query GL50803_16365-t26_1-p1 ; Align 142606 1 276 ; Align 142882 95 417 ; Align 143308 234 360 ; Align 143668 355 51 ; Align 143719 373 60 ; Align 143779 395 132 ; Align 143911 440 384 ; Align 144295 571 378 ; Align 144673 698 261 ; Align 144937 785 144 ; Align 145084 833 102 ; Align 145192 867 72 ; Align 145264 892 1035 utg11_pilon exonerate:protein2genome:local gene 227613 229256 2296 + . gene_id 0 ; sequence GL50803_16367-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 227613 229256 . + . utg11_pilon exonerate:protein2genome:local exon 227613 229256 . + . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 227613 229256 2296 + . alignment_id 0 ; Query GL50803_16367-t26_1-p1 ; Align 227613 1 1470 ; Align 229089 491 168 utg11_pilon exonerate:protein2genome:local gene 240036 240353 524 - . gene_id 0 ; sequence GL50803_16368-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 240036 240353 . - . utg11_pilon exonerate:protein2genome:local exon 240036 240353 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 240036 240353 524 - . alignment_id 0 ; Query GL50803_16368-t26_1-p1 ; Align 240354 1 318 utg11_pilon exonerate:protein2genome:local gene 244524 245513 1097 + . gene_id 0 ; sequence GL50803_16369-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 244524 245513 . + . utg11_pilon exonerate:protein2genome:local exon 244524 245513 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 244524 245513 1097 + . alignment_id 0 ; Query GL50803_16369-t26_1-p1 ; Align 244524 1 573 ; Align 245097 194 417 utg11_pilon exonerate:protein2genome:local gene 245990 250510 6032 + . gene_id 0 ; sequence GL50803_16370-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 245990 250510 . + . utg11_pilon exonerate:protein2genome:local exon 245990 250510 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 245990 250510 6032 + . alignment_id 0 ; Query GL50803_16370-t26_1-p1 ; Align 245990 1 810 ; Align 246803 271 3708 utg11_pilon exonerate:protein2genome:local gene 256329 258356 3327 + . gene_id 0 ; sequence GL50803_16371-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 256329 258356 . + . utg11_pilon exonerate:protein2genome:local exon 256329 258356 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 256329 258356 3327 + . alignment_id 0 ; Query GL50803_16371-t26_1-p1 ; Align 256329 1 2028 utg11_pilon exonerate:protein2genome:local gene 659274 663329 4537 - . gene_id 0 ; sequence GL50803_16373-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 659274 663329 . - . utg11_pilon exonerate:protein2genome:local exon 659274 663329 . - . insertions 15 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 659274 663329 4537 - . alignment_id 0 ; Query GL50803_16373-t26_1-p1 ; Align 663330 158 1602 ; Align 661728 694 390 ; Align 661332 824 1683 ; Align 659646 1385 201 ; Align 659442 1452 120 ; Align 659319 1492 45 utg47_pilon exonerate:protein2genome:local gene 426093 428273 3215 + . gene_id 0 ; sequence GL50803_16374-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 426093 428273 . + . utg47_pilon exonerate:protein2genome:local exon 426093 428273 . + . insertions 0 ; deletions 1 ; frameshifts 3 utg47_pilon exonerate:protein2genome:local similarity 426093 428273 3215 + . alignment_id 0 ; Query GL50803_16374-t26_1-p1 ; Align 426093 1 399 ; Align 426494 134 3 ; Align 426497 136 747 ; Align 427245 385 1029 utg47_pilon exonerate:protein2genome:local gene 424297 425882 2608 - . gene_id 0 ; sequence GL50803_16375-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 424297 425882 . - . utg47_pilon exonerate:protein2genome:local exon 424297 425882 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 424297 425882 2608 - . alignment_id 0 ; Query GL50803_16375-t26_1-p1 ; Align 425883 1 621 ; Align 425260 209 963 utg47_pilon exonerate:protein2genome:local gene 415593 417143 2271 + . gene_id 0 ; sequence GL50803_16376-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 415593 417143 . + . utg47_pilon exonerate:protein2genome:local exon 415593 417143 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 415593 417143 2271 + . alignment_id 0 ; Query GL50803_16376-t26_1-p1 ; Align 415593 2 153 ; Align 415752 53 1392 utg11_pilon exonerate:protein2genome:local gene 213766 215394 2679 - . gene_id 0 ; sequence GL50803_16380-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 213766 215394 . - . utg11_pilon exonerate:protein2genome:local exon 213766 215394 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 213766 215394 2679 - . alignment_id 0 ; Query GL50803_16380-t26_1-p1 ; Align 215395 1 1629 utg212_pilon exonerate:protein2genome:local gene 153135 153869 1185 + . gene_id 0 ; sequence GL50803_16384-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 153135 153869 . + . utg212_pilon exonerate:protein2genome:local exon 153135 153869 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 153135 153869 1185 + . alignment_id 0 ; Query GL50803_16384-t26_1-p1 ; Align 153135 1 735 utg212_pilon exonerate:protein2genome:local gene 157453 158940 1781 - . gene_id 0 ; sequence GL50803_16386-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 157453 158940 . - . utg212_pilon exonerate:protein2genome:local exon 157453 158940 . - . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 157453 158940 1781 - . alignment_id 0 ; Query GL50803_16386-t26_1-p1 ; Align 158941 1 1326 ; Align 157612 443 159 utg212_pilon exonerate:protein2genome:local gene 159027 159545 919 + . gene_id 0 ; sequence GL50803_16387-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 159027 159545 . + . utg212_pilon exonerate:protein2genome:local exon 159027 159545 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 159027 159545 919 + . alignment_id 0 ; Query GL50803_16387-t26_1-p1 ; Align 159027 1 519 utg18_pilon exonerate:protein2genome:local gene 115685 123799 9857 - . gene_id 0 ; sequence GL50803_16390-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 115685 123799 . - . utg18_pilon exonerate:protein2genome:local exon 115685 123799 . - . insertions 3 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 115685 123799 9857 - . alignment_id 0 ; Query GL50803_16390-t26_1-p1 ; Align 123800 18 4581 ; Align 119219 1546 1176 ; Align 118040 1938 1803 ; Align 116237 2540 552 utg18_pilon exonerate:protein2genome:local gene 96302 98491 3024 + . gene_id 0 ; sequence GL50803_16392-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 96302 98491 . + . utg18_pilon exonerate:protein2genome:local exon 96302 98491 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 96302 98491 3024 + . alignment_id 0 ; Query GL50803_16392-t26_1-p1 ; Align 96302 1 2190 utg11_pilon exonerate:protein2genome:local gene 77974 79869 2673 + . gene_id 0 ; sequence GL50803_16402-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 77974 79869 . + . utg11_pilon exonerate:protein2genome:local exon 77974 79869 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 77974 79869 2673 + . alignment_id 0 ; Query GL50803_16402-t26_1-p1 ; Align 77974 1 1896 utg11_pilon exonerate:protein2genome:local gene 74732 75211 745 - . gene_id 0 ; sequence GL50803_16404-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 74732 75211 . - . utg11_pilon exonerate:protein2genome:local exon 74732 75211 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 74732 75211 745 - . alignment_id 0 ; Query GL50803_16404-t26_1-p1 ; Align 75212 1 480 utg11_pilon exonerate:protein2genome:local gene 73175 74689 1499 - . gene_id 0 ; sequence GL50803_16405-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 73175 74689 . - . utg11_pilon exonerate:protein2genome:local exon 73175 74689 . - . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 73175 74689 1499 - . alignment_id 0 ; Query GL50803_16405-t26_1-p1 ; Align 74690 1 951 ; Align 73739 321 564 utg11_pilon exonerate:protein2genome:local gene 69918 71363 2117 + . gene_id 0 ; sequence GL50803_16406-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 69918 71363 . + . utg11_pilon exonerate:protein2genome:local exon 69918 71363 . + . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 69918 71363 2117 + . alignment_id 0 ; Query GL50803_16406-t26_1-p1 ; Align 69918 1 1323 ; Align 71241 445 123 utg11_pilon exonerate:protein2genome:local gene 57379 58491 1694 - . gene_id 0 ; sequence GL50803_16407-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 57379 58491 . - . utg11_pilon exonerate:protein2genome:local exon 57379 58491 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 57379 58491 1694 - . alignment_id 0 ; Query GL50803_16407-t26_1-p1 ; Align 58492 1 1113 utg11_pilon exonerate:protein2genome:local gene 51894 52352 717 - . gene_id 0 ; sequence GL50803_16411-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 51894 52352 . - . utg11_pilon exonerate:protein2genome:local exon 51894 52352 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 51894 52352 717 - . alignment_id 0 ; Query GL50803_16411-t26_1-p1 ; Align 52353 1 459 utg11_pilon exonerate:protein2genome:local gene 49193 51727 3855 - . gene_id 0 ; sequence GL50803_16412-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 49193 51727 . - . utg11_pilon exonerate:protein2genome:local exon 49193 51727 . - . insertions 0 ; deletions 1 ; frameshifts 3 utg11_pilon exonerate:protein2genome:local similarity 49193 51727 3855 - . alignment_id 0 ; Query GL50803_16412-t26_1-p1 ; Align 51728 1 207 ; Align 51519 71 1353 ; Align 50165 522 972 utg731_pilon exonerate:protein2genome:local gene 437513 438295 910 - . gene_id 0 ; sequence GL50803_16414-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 437513 438295 . - . utg731_pilon exonerate:protein2genome:local exon 437513 438295 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 437513 438295 910 - . alignment_id 0 ; Query GL50803_16414-t26_1-p1 ; Align 438296 1 783 utg731_pilon exonerate:protein2genome:local gene 435359 437455 2394 - . gene_id 0 ; sequence GL50803_16415-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 435359 437455 . - . utg731_pilon exonerate:protein2genome:local exon 435359 437455 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 435359 437455 2394 - . alignment_id 0 ; Query GL50803_16415-t26_1-p1 ; Align 437456 1 981 ; Align 436472 328 1113 utg349_pilon exonerate:protein2genome:local gene 181384 182161 1105 - . gene_id 0 ; sequence GL50803_16424-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 181384 182161 . - . utg349_pilon exonerate:protein2genome:local exon 181384 182161 . - . insertions 24 ; deletions 1 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 181384 182161 1105 - . alignment_id 0 ; Query GL50803_16424-t26_1-p1 ; Align 182162 1 594 ; Align 181567 200 33 ; Align 181522 211 42 ; Align 181468 225 84 utg349_pilon exonerate:protein2genome:local gene 178094 181291 4331 + . gene_id 0 ; sequence GL50803_16425-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 178094 181291 . + . utg349_pilon exonerate:protein2genome:local exon 178094 181291 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 178094 181291 4331 + . alignment_id 0 ; Query GL50803_16425-t26_1-p1 ; Align 178094 1 2811 ; Align 180908 938 384 utg47_pilon exonerate:protein2genome:local gene 1817406 1818971 1659 + . gene_id 0 ; sequence GL50803_16426-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1817406 1818971 . + . utg47_pilon exonerate:protein2genome:local exon 1817406 1818971 . + . insertions 3 ; deletions 8 utg47_pilon exonerate:protein2genome:local similarity 1817406 1818971 1659 + . alignment_id 0 ; Query GL50803_16426-t26_1-p1 ; Align 1817406 1 585 ; Align 1817991 200 297 ; Align 1818288 303 399 ; Align 1818690 436 282 utg47_pilon exonerate:protein2genome:local gene 1800432 1805714 6539 + . gene_id 0 ; sequence GL50803_16427-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1800432 1805714 . + . utg47_pilon exonerate:protein2genome:local exon 1800432 1805714 . + . insertions 12 ; deletions 8 utg47_pilon exonerate:protein2genome:local similarity 1800432 1805714 6539 + . alignment_id 0 ; Query GL50803_16427-t26_1-p1 ; Align 1800432 1 522 ; Align 1800954 177 978 ; Align 1801935 503 45 ; Align 1801989 518 930 ; Align 1802919 829 42 ; Align 1802961 845 123 ; Align 1803084 887 63 ; Align 1803147 909 2403 ; Align 1805550 1711 165 utg47_pilon exonerate:protein2genome:local gene 1789224 1791062 2045 - . gene_id 0 ; sequence GL50803_16428-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1789224 1791062 . - . utg47_pilon exonerate:protein2genome:local exon 1789224 1791062 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1789224 1791062 2045 - . alignment_id 0 ; Query GL50803_16428-t26_1-p1 ; Align 1791063 1 1839 utg349_pilon exonerate:protein2genome:local gene 124669 125178 777 - . gene_id 0 ; sequence GL50803_16429-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 124669 125178 . - . utg349_pilon exonerate:protein2genome:local exon 124669 125178 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 124669 125178 777 - . alignment_id 0 ; Query GL50803_16429-t26_1-p1 ; Align 125179 1 510 utg349_pilon exonerate:protein2genome:local gene 206792 207889 1570 - . gene_id 0 ; sequence GL50803_1643-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 206792 207889 . - . utg349_pilon exonerate:protein2genome:local exon 206792 207889 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 206792 207889 1570 - . alignment_id 0 ; Query GL50803_1643-t26_1-p1 ; Align 207890 1 1098 utg349_pilon exonerate:protein2genome:local gene 117200 120337 2976 - . gene_id 0 ; sequence GL50803_16430-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 120173 120337 . - . utg349_pilon exonerate:protein2genome:local exon 120173 120337 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 120171 120172 . - . intron_id 1 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 120143 120172 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 120143 120144 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 117200 120142 . - . utg349_pilon exonerate:protein2genome:local exon 117200 120142 . - . insertions 3 ; deletions 7 utg349_pilon exonerate:protein2genome:local similarity 117200 120337 2976 - . alignment_id 0 ; Query GL50803_16430-t26_1-p1 ; Align 120338 1173 165 ; Align 120143 1228 1095 ; Align 119048 1596 708 ; Align 118337 1832 117 ; Align 118220 1872 450 ; Align 117770 2025 570 utg349_pilon exonerate:protein2genome:local gene 114742 115323 952 - . gene_id 0 ; sequence GL50803_16431-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 114742 115323 . - . utg349_pilon exonerate:protein2genome:local exon 114742 115323 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 114742 115323 952 - . alignment_id 0 ; Query GL50803_16431-t26_1-p1 ; Align 115324 1 582 utg64_pilon exonerate:protein2genome:local gene 720442 722382 2784 + . gene_id 0 ; sequence GL50803_16433-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 720442 722382 . + . utg64_pilon exonerate:protein2genome:local exon 720442 722382 . + . insertions 12 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 720442 722382 2784 + . alignment_id 0 ; Query GL50803_16433-t26_1-p1 ; Align 720442 1 1344 ; Align 721798 449 585 utg64_pilon exonerate:protein2genome:local gene 744648 746726 3032 + . gene_id 0 ; sequence GL50803_16435-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 744648 746726 . + . utg64_pilon exonerate:protein2genome:local exon 744648 746726 . + . insertions 3 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 744648 746726 3032 + . alignment_id 0 ; Query GL50803_16435-t26_1-p1 ; Align 744648 1 798 ; Align 745449 267 804 ; Align 746253 536 99 ; Align 746352 570 375 utg64_pilon exonerate:protein2genome:local gene 746897 756430 13105 - . gene_id 0 ; sequence GL50803_16436-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 746897 756430 . - . utg64_pilon exonerate:protein2genome:local exon 746897 756430 . - . insertions 0 ; deletions 4 ; frameshifts 6 utg64_pilon exonerate:protein2genome:local similarity 746897 756430 13105 - . alignment_id 0 ; Query GL50803_16436-t26_1-p1 ; Align 756431 1 840 ; Align 755590 281 3 ; Align 755587 283 204 ; Align 755382 351 57 ; Align 755325 371 480 ; Align 754844 531 4584 ; Align 750260 2060 1194 ; Align 749065 2458 1500 ; Align 747565 2959 3 ; Align 747560 2960 663 utg349_pilon exonerate:protein2genome:local gene 1568182 1569795 1528 + . gene_id 0 ; sequence GL50803_16438-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1568182 1569795 . + . utg349_pilon exonerate:protein2genome:local exon 1568182 1569795 . + . insertions 3 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1568182 1569795 1528 + . alignment_id 0 ; Query GL50803_16438-t26_1-p1 ; Align 1568182 1 858 ; Align 1569043 287 384 ; Align 1569427 416 369 utg11_pilon exonerate:protein2genome:local gene 1604148 1606610 4134 - . gene_id 0 ; sequence GL50803_16443-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1604148 1606610 . - . utg11_pilon exonerate:protein2genome:local exon 1604148 1606610 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1604148 1606610 4134 - . alignment_id 0 ; Query GL50803_16443-t26_1-p1 ; Align 1606611 1 2463 utg11_pilon exonerate:protein2genome:local gene 1594750 1597026 2794 + . gene_id 0 ; sequence GL50803_16444-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1594750 1597026 . + . utg11_pilon exonerate:protein2genome:local exon 1594750 1597026 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1594750 1597026 2794 + . alignment_id 0 ; Query GL50803_16444-t26_1-p1 ; Align 1594750 1 2277 utg731_pilon exonerate:protein2genome:local gene 806433 812312 5942 - . gene_id 0 ; sequence GL50803_16445-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 806433 812312 . - . utg731_pilon exonerate:protein2genome:local exon 806433 812312 . - . insertions 30 ; deletions 10 utg731_pilon exonerate:protein2genome:local similarity 806433 812312 5942 - . alignment_id 0 ; Query GL50803_16445-t26_1-p1 ; Align 812313 1 270 ; Align 812040 91 822 ; Align 811215 365 513 ; Align 810696 536 477 ; Align 810213 695 168 ; Align 810045 752 156 ; Align 809889 805 42 ; Align 809847 820 21 ; Align 809826 828 258 ; Align 809568 915 66 ; Align 809502 940 495 ; Align 809007 1107 492 ; Align 808512 1271 213 ; Align 808296 1342 21 ; Align 808269 1349 1836 utg308_pilon exonerate:protein2genome:local gene 684673 685590 1453 + . gene_id 0 ; sequence GL50803_16450-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 684673 685590 . + . utg308_pilon exonerate:protein2genome:local exon 684673 685590 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 684673 685590 1453 + . alignment_id 0 ; Query GL50803_16450-t26_1-p1 ; Align 684673 1 918 utg349_pilon exonerate:protein2genome:local gene 407560 408699 1249 + . gene_id 0 ; sequence GL50803_16452-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 407560 408699 . + . utg349_pilon exonerate:protein2genome:local exon 407560 408699 . + . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 407560 408699 1249 + . alignment_id 0 ; Query GL50803_16452-t26_1-p1 ; Align 407560 1 276 ; Align 407836 94 36 ; Align 407872 107 195 ; Align 408067 173 633 utg349_pilon exonerate:protein2genome:local gene 401830 402777 1562 + . gene_id 0 ; sequence GL50803_16453-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 401830 402777 . + . utg349_pilon exonerate:protein2genome:local exon 401830 402777 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 401830 402777 1562 + . alignment_id 0 ; Query GL50803_16453-t26_1-p1 ; Align 401830 1 948 utg349_pilon exonerate:protein2genome:local gene 399571 401748 3245 - . gene_id 0 ; sequence GL50803_16454-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 399571 401748 . - . utg349_pilon exonerate:protein2genome:local exon 399571 401748 . - . insertions 18 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 399571 401748 3245 - . alignment_id 0 ; Query GL50803_16454-t26_1-p1 ; Align 401749 1 249 ; Align 401491 84 48 ; Align 401434 100 1863 utg349_pilon exonerate:protein2genome:local gene 397642 399531 3041 - . gene_id 0 ; sequence GL50803_16456-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 397642 399531 . - . utg349_pilon exonerate:protein2genome:local exon 397642 399531 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 397642 399531 3041 - . alignment_id 0 ; Query GL50803_16456-t26_1-p1 ; Align 399532 1 1890 utg349_pilon exonerate:protein2genome:local gene 384456 386126 1676 - . gene_id 0 ; sequence GL50803_16457-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 384456 386126 . - . utg349_pilon exonerate:protein2genome:local exon 384456 386126 . - . insertions 3 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 384456 386126 1676 - . alignment_id 0 ; Query GL50803_16457-t26_1-p1 ; Align 386127 1 366 ; Align 385761 124 63 ; Align 385695 145 315 ; Align 385380 253 924 utg265_pilon exonerate:protein2genome:local gene 403686 407296 5828 - . gene_id 0 ; sequence GL50803_16460-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 403686 407296 . - . utg265_pilon exonerate:protein2genome:local exon 403686 407296 . - . insertions 0 ; deletions 0 ; frameshifts 5 utg265_pilon exonerate:protein2genome:local similarity 403686 407296 5828 - . alignment_id 0 ; Query GL50803_16460-t26_1-p1 ; Align 407297 1 351 ; Align 406945 118 54 ; Align 406890 136 99 ; Align 406790 169 1281 ; Align 405507 596 1821 utg47_pilon exonerate:protein2genome:local gene 950203 951163 1276 + . gene_id 0 ; sequence GL50803_16463-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 950203 951163 . + . utg47_pilon exonerate:protein2genome:local exon 950203 951163 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 950203 951163 1276 + . alignment_id 0 ; Query GL50803_16463-t26_1-p1 ; Align 950203 1 258 ; Align 950462 87 702 utg47_pilon exonerate:protein2genome:local gene 964647 967217 3419 + . gene_id 0 ; sequence GL50803_16464-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 964647 967217 . + . utg47_pilon exonerate:protein2genome:local exon 964647 967217 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 964647 967217 3419 + . alignment_id 0 ; Query GL50803_16464-t26_1-p1 ; Align 964647 1 2571 utg47_pilon exonerate:protein2genome:local gene 1565404 1566318 1432 + . gene_id 0 ; sequence GL50803_16468-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1565404 1566318 . + . utg47_pilon exonerate:protein2genome:local exon 1565404 1566318 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1565404 1566318 1432 + . alignment_id 0 ; Query GL50803_16468-t26_1-p1 ; Align 1565404 1 915 utg47_pilon exonerate:protein2genome:local gene 1552022 1554392 3384 - . gene_id 0 ; sequence GL50803_16471-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1552022 1554392 . - . utg47_pilon exonerate:protein2genome:local exon 1552022 1554392 . - . insertions 0 ; deletions 0 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 1552022 1554392 3384 - . alignment_id 0 ; Query GL50803_16471-t26_1-p1 ; Align 1554393 1 2040 ; Align 1552349 681 327 utg47_pilon exonerate:protein2genome:local gene 1921349 2029080 1134 + . gene_id 0 ; sequence GL50803_16472-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1921349 1921584 . + . utg47_pilon exonerate:protein2genome:local exon 1921349 1921584 . + . insertions 15 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1921585 1921586 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1921585 1922155 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1922154 1922155 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1922156 1922881 . + . utg47_pilon exonerate:protein2genome:local exon 1922156 1922881 . + . insertions 6 ; deletions 2 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local splice5 1922882 1922883 . + . intron_id 2 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1922882 1962237 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1962236 1962237 . + . intron_id 1 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 1962238 1962324 . + . utg47_pilon exonerate:protein2genome:local exon 1962238 1962324 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1962325 1962326 . + . intron_id 3 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local intron 1962325 2028955 . + . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 2028954 2028955 . + . intron_id 2 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 2028956 2029080 . + . utg47_pilon exonerate:protein2genome:local exon 2028956 2029080 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1921349 2029080 1134 + . alignment_id 0 ; Query GL50803_16472-t26_1-p1 ; Align 1921349 40 30 ; Align 1921382 50 81 ; Align 1921475 77 108 ; Align 1922157 114 303 ; Align 1922463 215 24 ; Align 1922488 223 27 ; Align 1922518 232 180 ; Align 1922698 293 93 ; Align 1922791 325 90 ; Align 1962240 356 84 ; Align 2028958 385 123 utg731_pilon exonerate:protein2genome:local gene 773913 774980 1417 - . gene_id 0 ; sequence GL50803_16475-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 773913 774980 . - . utg731_pilon exonerate:protein2genome:local exon 773913 774980 . - . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 773913 774980 1417 - . alignment_id 0 ; Query GL50803_16475-t26_1-p1 ; Align 774981 1 783 ; Align 774198 265 285 utg731_pilon exonerate:protein2genome:local gene 772206 773891 2086 - . gene_id 0 ; sequence GL50803_16476-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 772206 773891 . - . utg731_pilon exonerate:protein2genome:local exon 772206 773891 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 772206 773891 2086 - . alignment_id 0 ; Query GL50803_16476-t26_1-p1 ; Align 773892 1 1686 utg731_pilon exonerate:protein2genome:local gene 769955 771694 2818 + . gene_id 0 ; sequence GL50803_16477-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 769955 771694 . + . utg731_pilon exonerate:protein2genome:local exon 769955 771694 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 769955 771694 2818 + . alignment_id 0 ; Query GL50803_16477-t26_1-p1 ; Align 769955 1 1740 utg731_pilon exonerate:protein2genome:local gene 752369 754234 2103 - . gene_id 0 ; sequence GL50803_16478-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 752369 754234 . - . utg731_pilon exonerate:protein2genome:local exon 752369 754234 . - . insertions 3 ; deletions 7 utg731_pilon exonerate:protein2genome:local similarity 752369 754234 2103 - . alignment_id 0 ; Query GL50803_16478-t26_1-p1 ; Align 754235 1 564 ; Align 753671 191 588 ; Align 753083 388 525 ; Align 752558 564 21 ; Align 752537 574 93 ; Align 752441 605 72 utg212_pilon exonerate:protein2genome:local gene 494264 497903 5264 + . gene_id 0 ; sequence GL50803_16479-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 494264 497903 . + . utg212_pilon exonerate:protein2genome:local exon 494264 497903 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 494264 497903 5264 + . alignment_id 0 ; Query GL50803_16479-t26_1-p1 ; Align 494264 1 1407 ; Align 495672 470 2232 utg212_pilon exonerate:protein2genome:local gene 486841 488058 1571 + . gene_id 0 ; sequence GL50803_16482-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 486841 488058 . + . utg212_pilon exonerate:protein2genome:local exon 486841 488058 . + . insertions 6 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 486841 488058 1571 + . alignment_id 0 ; Query GL50803_16482-t26_1-p1 ; Align 486841 1 837 ; Align 487684 280 375 utg212_pilon exonerate:protein2genome:local gene 485799 486656 1283 - . gene_id 0 ; sequence GL50803_16483-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 485799 486656 . - . utg212_pilon exonerate:protein2genome:local exon 485799 486656 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 485799 486656 1283 - . alignment_id 0 ; Query GL50803_16483-t26_1-p1 ; Align 486657 1 858 utg212_pilon exonerate:protein2genome:local gene 479256 484087 6711 - . gene_id 0 ; sequence GL50803_16484-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 479256 484087 . - . utg212_pilon exonerate:protein2genome:local exon 479256 484087 . - . insertions 21 ; deletions 0 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 479256 484087 6711 - . alignment_id 0 ; Query GL50803_16484-t26_1-p1 ; Align 484088 1 609 ; Align 483476 204 15 ; Align 483458 209 198 ; Align 483257 275 1557 ; Align 481699 794 1155 ; Align 480543 1179 906 ; Align 479625 1481 369 utg212_pilon exonerate:protein2genome:local gene 478590 479186 954 - . gene_id 0 ; sequence GL50803_16485-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 478590 479186 . - . utg212_pilon exonerate:protein2genome:local exon 478590 479186 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 478590 479186 954 - . alignment_id 0 ; Query GL50803_16485-t26_1-p1 ; Align 479187 1 597 utg212_pilon exonerate:protein2genome:local gene 477024 477563 639 - . gene_id 0 ; sequence GL50803_16486-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 477024 477563 . - . utg212_pilon exonerate:protein2genome:local exon 477024 477563 . - . insertions 0 ; deletions 2 utg212_pilon exonerate:protein2genome:local similarity 477024 477563 639 - . alignment_id 0 ; Query GL50803_16486-t26_1-p1 ; Align 477564 165 219 ; Align 477345 240 321 utg265_pilon exonerate:protein2genome:local gene 832771 833112 482 + . gene_id 0 ; sequence GL50803_1649-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 832771 833112 . + . utg265_pilon exonerate:protein2genome:local exon 832771 833112 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 832771 833112 482 + . alignment_id 0 ; Query GL50803_1649-t26_1-p1 ; Align 832771 1 342 utg47_pilon exonerate:protein2genome:local gene 2092273 2098011 5426 - . gene_id 0 ; sequence GL50803_16492-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2093301 2098011 . - . utg47_pilon exonerate:protein2genome:local exon 2093301 2098011 . - . insertions 3 ; deletions 16 utg47_pilon exonerate:protein2genome:local splice5 2093299 2093300 . - . intron_id 1 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local intron 2093259 2093300 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 2093259 2093260 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2092273 2093258 . - . utg47_pilon exonerate:protein2genome:local exon 2092273 2093258 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2092273 2098011 5426 - . alignment_id 0 ; Query GL50803_16492-t26_1-p1 ; Align 2098012 1003 102 ; Align 2097910 1038 264 ; Align 2097646 1127 747 ; Align 2096896 1376 213 ; Align 2096683 1448 141 ; Align 2096542 1499 387 ; Align 2096155 1629 261 ; Align 2095894 1717 372 ; Align 2095522 1843 570 ; Align 2094952 2034 1347 ; Align 2093605 2487 303 ; Align 2093257 2589 15 ; Align 2093239 2594 966 utg47_pilon exonerate:protein2genome:local gene 2090451 2092169 2010 - . gene_id 0 ; sequence GL50803_16493-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2090451 2092169 . - . utg47_pilon exonerate:protein2genome:local exon 2090451 2092169 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 2090451 2092169 2010 - . alignment_id 0 ; Query GL50803_16493-t26_1-p1 ; Align 2092170 1 627 ; Align 2091543 211 585 ; Align 2090958 408 507 utg47_pilon exonerate:protein2genome:local gene 2087134 2089170 2142 - . gene_id 0 ; sequence GL50803_16494-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2087134 2089170 . - . utg47_pilon exonerate:protein2genome:local exon 2087134 2089170 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 2087134 2089170 2142 - . alignment_id 0 ; Query GL50803_16494-t26_1-p1 ; Align 2089171 1 1563 ; Align 2087608 524 474 utg47_pilon exonerate:protein2genome:local gene 2084025 2085287 1509 - . gene_id 0 ; sequence GL50803_16495-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2084231 2085287 . - . utg47_pilon exonerate:protein2genome:local exon 2084231 2085287 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 2084229 2084230 . - . intron_id 1 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local intron 2084201 2084230 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 2084201 2084202 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2084025 2084200 . - . utg47_pilon exonerate:protein2genome:local exon 2084025 2084200 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2084025 2085287 1509 - . alignment_id 0 ; Query GL50803_16495-t26_1-p1 ; Align 2085288 1 126 ; Align 2085162 44 930 ; Align 2084199 355 174 utg11_pilon exonerate:protein2genome:local gene 1364219 1365841 2566 - . gene_id 0 ; sequence GL50803_16498-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1364219 1365841 . - . utg11_pilon exonerate:protein2genome:local exon 1364219 1365841 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1364219 1365841 2566 - . alignment_id 0 ; Query GL50803_16498-t26_1-p1 ; Align 1365842 1 1623 utg11_pilon exonerate:protein2genome:local gene 1360700 1362847 3493 + . gene_id 0 ; sequence GL50803_16500-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1360700 1362847 . + . utg11_pilon exonerate:protein2genome:local exon 1360700 1362847 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1360700 1362847 3493 + . alignment_id 0 ; Query GL50803_16500-t26_1-p1 ; Align 1360700 1 2148 utg349_pilon exonerate:protein2genome:local gene 1223531 1638874 1648 + . gene_id 0 ; sequence GL50803_16501-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1223531 1223954 . + . utg349_pilon exonerate:protein2genome:local exon 1223531 1223954 . + . insertions 3 ; deletions 4 utg349_pilon exonerate:protein2genome:local splice5 1223955 1223956 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1223955 1244995 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1244994 1244995 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1244996 1245442 . + . utg349_pilon exonerate:protein2genome:local exon 1244996 1245442 . + . insertions 18 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1245443 1245444 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1245443 1433152 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1433151 1433152 . + . intron_id 1 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1433153 1433299 . + . utg349_pilon exonerate:protein2genome:local exon 1433153 1433299 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local splice5 1433300 1433301 . + . intron_id 3 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local intron 1433300 1434329 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 1434328 1434329 . + . intron_id 2 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1434330 1434503 . + . utg349_pilon exonerate:protein2genome:local exon 1434330 1434503 . + . insertions 9 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1434504 1434505 . + . intron_id 4 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 1434504 1434800 . + . intron_id 4 utg349_pilon exonerate:protein2genome:local splice3 1434799 1434800 . + . intron_id 3 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local cds 1434801 1435095 . + . utg349_pilon exonerate:protein2genome:local exon 1434801 1435095 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1435096 1435097 . + . intron_id 5 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1435096 1442543 . + . intron_id 5 utg349_pilon exonerate:protein2genome:local splice3 1442542 1442543 . + . intron_id 4 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 1442544 1442785 . + . utg349_pilon exonerate:protein2genome:local exon 1442544 1442785 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1442786 1442787 . + . intron_id 6 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local intron 1442786 1637411 . + . intron_id 6 utg349_pilon exonerate:protein2genome:local splice3 1637410 1637411 . + . intron_id 5 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1637412 1637637 . + . utg349_pilon exonerate:protein2genome:local exon 1637412 1637637 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1637638 1637639 . + . intron_id 7 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 1637638 1638750 . + . intron_id 7 utg349_pilon exonerate:protein2genome:local splice3 1638749 1638750 . + . intron_id 6 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1638751 1638874 . + . utg349_pilon exonerate:protein2genome:local exon 1638751 1638874 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1223531 1638874 1648 + . alignment_id 0 ; Query GL50803_16501-t26_1-p1 ; Align 1223531 1 96 ; Align 1223627 37 243 ; Align 1223873 118 81 ; Align 1244998 146 87 ; Align 1245088 175 111 ; Align 1245202 212 45 ; Align 1245247 228 54 ; Align 1245307 246 9 ; Align 1245319 249 96 ; Align 1245418 281 24 ; Align 1433155 290 93 ; Align 1433248 322 15 ; Align 1433263 328 36 ; Align 1434332 341 15 ; Align 1434353 346 111 ; Align 1434467 383 36 ; Align 1434803 396 111 ; Align 1434914 434 180 ; Align 1442545 495 240 ; Align 1637414 576 162 ; Align 1637576 631 60 ; Align 1638752 652 123 utg11_pilon exonerate:protein2genome:local gene 1404002 1405450 1574 + . gene_id 0 ; sequence GL50803_16502-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1404002 1405450 . + . utg11_pilon exonerate:protein2genome:local exon 1404002 1405450 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1404002 1405450 1574 + . alignment_id 0 ; Query GL50803_16502-t26_1-p1 ; Align 1404002 2 1449 utg11_pilon exonerate:protein2genome:local gene 1387292 1389448 2302 - . gene_id 0 ; sequence GL50803_16503-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1388185 1389448 . - . utg11_pilon exonerate:protein2genome:local exon 1388185 1389448 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1388183 1388184 . - . intron_id 1 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 1388149 1388184 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1388149 1388150 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1387292 1388148 . - . utg11_pilon exonerate:protein2genome:local exon 1387292 1388148 . - . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 1387292 1389448 2302 - . alignment_id 0 ; Query GL50803_16503-t26_1-p1 ; Align 1389449 1 975 ; Align 1388474 327 288 ; Align 1388147 424 636 ; Align 1387511 640 219 utg11_pilon exonerate:protein2genome:local gene 1381782 1384439 4068 + . gene_id 0 ; sequence GL50803_16504-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1381782 1384439 . + . utg11_pilon exonerate:protein2genome:local exon 1381782 1384439 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1381782 1384439 4068 + . alignment_id 0 ; Query GL50803_16504-t26_1-p1 ; Align 1381782 1 2658 utg11_pilon exonerate:protein2genome:local gene 1378078 1379145 1467 - . gene_id 0 ; sequence GL50803_16506-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1378078 1379145 . - . utg11_pilon exonerate:protein2genome:local exon 1378078 1379145 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1378078 1379145 1467 - . alignment_id 0 ; Query GL50803_16506-t26_1-p1 ; Align 1379146 1 1068 utg11_pilon exonerate:protein2genome:local gene 1373238 1375856 4035 - . gene_id 0 ; sequence GL50803_16507-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1373238 1375856 . - . utg11_pilon exonerate:protein2genome:local exon 1373238 1375856 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1373238 1375856 4035 - . alignment_id 0 ; Query GL50803_16507-t26_1-p1 ; Align 1375857 1 1047 ; Align 1374810 352 1572 utg11_pilon exonerate:protein2genome:local gene 1369693 1371795 2919 - . gene_id 0 ; sequence GL50803_16508-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1369693 1371795 . - . utg11_pilon exonerate:protein2genome:local exon 1369693 1371795 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1369693 1371795 2919 - . alignment_id 0 ; Query GL50803_16508-t26_1-p1 ; Align 1371796 446 2103 utg265_pilon exonerate:protein2genome:local gene 831467 831574 124 - . gene_id 0 ; sequence GL50803_1651-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 831467 831574 . - . utg265_pilon exonerate:protein2genome:local exon 831467 831574 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 831467 831574 124 - . alignment_id 0 ; Query GL50803_1651-t26_1-p1 ; Align 831575 1 108 utg11_pilon exonerate:protein2genome:local gene 313529 315823 3868 + . gene_id 0 ; sequence GL50803_16512-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 313529 315823 . + . utg11_pilon exonerate:protein2genome:local exon 313529 315823 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 313529 315823 3868 + . alignment_id 0 ; Query GL50803_16512-t26_1-p1 ; Align 313529 1 2295 utg11_pilon exonerate:protein2genome:local gene 338470 345807 9965 - . gene_id 0 ; sequence GL50803_16513-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 338470 345807 . - . utg11_pilon exonerate:protein2genome:local exon 338470 345807 . - . insertions 0 ; deletions 6 utg11_pilon exonerate:protein2genome:local similarity 338470 345807 9965 - . alignment_id 0 ; Query GL50803_16513-t26_1-p1 ; Align 345808 1 501 ; Align 345307 171 12 ; Align 345295 178 6825 utg11_pilon exonerate:protein2genome:local gene 360302 362446 2981 + . gene_id 0 ; sequence GL50803_16516-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 360302 362446 . + . utg11_pilon exonerate:protein2genome:local exon 360302 362446 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 360302 362446 2981 + . alignment_id 0 ; Query GL50803_16516-t26_1-p1 ; Align 360302 1 2145 utg308_pilon exonerate:protein2genome:local gene 715513 718857 4657 - . gene_id 0 ; sequence GL50803_16518-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 715513 718857 . - . utg308_pilon exonerate:protein2genome:local exon 715513 718857 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 715513 718857 4657 - . alignment_id 0 ; Query GL50803_16518-t26_1-p1 ; Align 718858 1 3345 utg308_pilon exonerate:protein2genome:local gene 723653 724771 1983 + . gene_id 0 ; sequence GL50803_16519-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 723653 724771 . + . utg308_pilon exonerate:protein2genome:local exon 723653 724771 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 723653 724771 1983 + . alignment_id 0 ; Query GL50803_16519-t26_1-p1 ; Align 723653 1 1119 utg308_pilon exonerate:protein2genome:local gene 725343 728872 4834 + . gene_id 0 ; sequence GL50803_16520-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 725343 728872 . + . utg308_pilon exonerate:protein2genome:local exon 725343 728872 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 725343 728872 4834 + . alignment_id 0 ; Query GL50803_16520-t26_1-p1 ; Align 725343 1 2346 ; Align 727690 783 651 ; Align 728342 1000 531 utg308_pilon exonerate:protein2genome:local gene 729967 730842 1286 - . gene_id 0 ; sequence GL50803_16521-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 729967 730842 . - . utg308_pilon exonerate:protein2genome:local exon 729967 730842 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 729967 730842 1286 - . alignment_id 0 ; Query GL50803_16521-t26_1-p1 ; Align 730843 1 876 utg308_pilon exonerate:protein2genome:local gene 735930 736379 611 - . gene_id 0 ; sequence GL50803_16522-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 735930 736379 . - . utg308_pilon exonerate:protein2genome:local exon 735930 736379 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 735930 736379 611 - . alignment_id 0 ; Query GL50803_16522-t26_1-p1 ; Align 736380 1 450 utg308_pilon exonerate:protein2genome:local gene 736390 737034 799 - . gene_id 0 ; sequence GL50803_16523-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 736390 737034 . - . utg308_pilon exonerate:protein2genome:local exon 736390 737034 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 736390 737034 799 - . alignment_id 0 ; Query GL50803_16523-t26_1-p1 ; Align 737035 18 645 utg308_pilon exonerate:protein2genome:local gene 740105 741241 1981 + . gene_id 0 ; sequence GL50803_16525-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 740105 741241 . + . utg308_pilon exonerate:protein2genome:local exon 740105 741241 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 740105 741241 1981 + . alignment_id 0 ; Query GL50803_16525-t26_1-p1 ; Align 740105 1 1137 utg308_pilon exonerate:protein2genome:local gene 747590 748780 1935 - . gene_id 0 ; sequence GL50803_16526-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 747590 748780 . - . utg308_pilon exonerate:protein2genome:local exon 747590 748780 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 747590 748780 1935 - . alignment_id 0 ; Query GL50803_16526-t26_1-p1 ; Align 748781 1 1191 utg11_pilon exonerate:protein2genome:local gene 172149 172463 180 - . gene_id 0 ; sequence GL50803_16529-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 172149 172463 . - . utg11_pilon exonerate:protein2genome:local exon 172149 172463 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 172149 172463 180 - . alignment_id 0 ; Query GL50803_16529-t26_1-p1 ; Align 172464 1 315 utg47_pilon exonerate:protein2genome:local gene 1368725 1371215 3362 + . gene_id 0 ; sequence GL50803_16532-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1368725 1371215 . + . utg47_pilon exonerate:protein2genome:local exon 1368725 1371215 . + . insertions 0 ; deletions 6 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 1368725 1371215 3362 + . alignment_id 0 ; Query GL50803_16532-t26_1-p1 ; Align 1368725 2 168 ; Align 1368895 58 3 ; Align 1368898 60 564 ; Align 1369462 251 600 ; Align 1370063 451 1002 ; Align 1371066 786 72 ; Align 1371138 811 78 utg47_pilon exonerate:protein2genome:local gene 1365928 1368712 3489 + . gene_id 0 ; sequence GL50803_16533-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1365928 1368712 . + . utg47_pilon exonerate:protein2genome:local exon 1365928 1368712 . + . insertions 0 ; deletions 5 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 1365928 1368712 3489 + . alignment_id 0 ; Query GL50803_16533-t26_1-p1 ; Align 1365928 1 660 ; Align 1366588 222 12 ; Align 1366602 226 564 ; Align 1367166 415 330 ; Align 1367497 525 300 ; Align 1367797 628 42 ; Align 1367840 642 873 utg47_pilon exonerate:protein2genome:local gene 886092 1365632 2708 + . gene_id 0 ; sequence GL50803_16534-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 886092 886215 . + . utg47_pilon exonerate:protein2genome:local exon 886092 886215 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 886216 886217 . + . intron_id 1 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 886216 986003 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 986002 986003 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 986004 986409 . + . utg47_pilon exonerate:protein2genome:local exon 986004 986409 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 986410 986411 . + . intron_id 2 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 986410 1045643 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1045642 1045643 . + . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1045644 1045797 . + . utg47_pilon exonerate:protein2genome:local exon 1045644 1045797 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1045798 1045799 . + . intron_id 3 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1045798 1202911 . + . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 1202910 1202911 . + . intron_id 2 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 1202912 1202995 . + . utg47_pilon exonerate:protein2genome:local exon 1202912 1202995 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1202996 1202997 . + . intron_id 4 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1202996 1336039 . + . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 1336038 1336039 . + . intron_id 3 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1336040 1336075 . + . utg47_pilon exonerate:protein2genome:local exon 1336040 1336075 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1336076 1336077 . + . intron_id 5 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1336076 1363391 . + . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 1363390 1363391 . + . intron_id 4 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1363392 1365632 . + . utg47_pilon exonerate:protein2genome:local exon 1363392 1365632 . + . insertions 3 ; deletions 8 utg47_pilon exonerate:protein2genome:local similarity 886092 1365632 2708 + . alignment_id 0 ; Query GL50803_16534-t26_1-p1 ; Align 886092 4 123 ; Align 986006 46 402 ; Align 1045645 181 51 ; Align 1045699 198 99 ; Align 1202912 231 45 ; Align 1202957 248 39 ; Align 1336040 261 36 ; Align 1363392 273 18 ; Align 1363413 279 96 ; Align 1363509 313 189 ; Align 1363698 379 1239 ; Align 1364937 795 696 utg47_pilon exonerate:protein2genome:local gene 1360619 1361783 1415 - . gene_id 0 ; sequence GL50803_16535-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1360619 1361783 . - . utg47_pilon exonerate:protein2genome:local exon 1360619 1361783 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1360619 1361783 1415 - . alignment_id 0 ; Query GL50803_16535-t26_1-p1 ; Align 1361784 230 150 ; Align 1361634 281 393 ; Align 1361240 412 621 utg47_pilon exonerate:protein2genome:local gene 1353236 1354879 2455 - . gene_id 0 ; sequence GL50803_16537-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1353236 1354879 . - . utg47_pilon exonerate:protein2genome:local exon 1353236 1354879 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1353236 1354879 2455 - . alignment_id 0 ; Query GL50803_16537-t26_1-p1 ; Align 1354880 1 1644 utg18_pilon exonerate:protein2genome:local gene 421387 422790 2286 - . gene_id 0 ; sequence GL50803_16540-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 421387 422790 . - . utg18_pilon exonerate:protein2genome:local exon 421387 422790 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 421387 422790 2286 - . alignment_id 0 ; Query GL50803_16540-t26_1-p1 ; Align 422791 1 1404 utg18_pilon exonerate:protein2genome:local gene 425499 427793 3186 + . gene_id 0 ; sequence GL50803_16541-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 425499 427793 . + . utg18_pilon exonerate:protein2genome:local exon 425499 427793 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 425499 427793 3186 + . alignment_id 0 ; Query GL50803_16541-t26_1-p1 ; Align 425499 1 2295 utg18_pilon exonerate:protein2genome:local gene 329807 331537 2458 - . gene_id 0 ; sequence GL50803_16543-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 329807 331537 . - . utg18_pilon exonerate:protein2genome:local exon 329807 331537 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 329807 331537 2458 - . alignment_id 0 ; Query GL50803_16543-t26_1-p1 ; Align 331538 1 1731 utg18_pilon exonerate:protein2genome:local gene 335225 353704 23710 - . gene_id 0 ; sequence GL50803_16544-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 335225 353704 . - . utg18_pilon exonerate:protein2genome:local exon 335225 353704 . - . insertions 18 ; deletions 18 utg18_pilon exonerate:protein2genome:local similarity 335225 353704 23710 - . alignment_id 0 ; Query GL50803_16544-t26_1-p1 ; Align 353705 1 870 ; Align 352835 294 93 ; Align 352742 327 2688 ; Align 350054 1225 540 ; Align 349514 1406 12 ; Align 349502 1413 3348 ; Align 346151 2529 330 ; Align 345821 2640 4725 ; Align 341096 4216 870 ; Align 340214 4506 1200 ; Align 339014 4907 213 ; Align 338798 4978 1290 ; Align 337508 5411 387 ; Align 337121 5541 1896 utg47_pilon exonerate:protein2genome:local gene 733737 738865 7673 + . gene_id 0 ; sequence GL50803_16547-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 733737 738865 . + . utg47_pilon exonerate:protein2genome:local exon 733737 738865 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 733737 738865 7673 + . alignment_id 0 ; Query GL50803_16547-t26_1-p1 ; Align 733737 1 630 ; Align 734368 211 2943 ; Align 737312 1192 1554 utg47_pilon exonerate:protein2genome:local gene 747713 748438 1091 - . gene_id 0 ; sequence GL50803_16548-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 747713 748438 . - . utg47_pilon exonerate:protein2genome:local exon 747713 748438 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 747713 748438 1091 - . alignment_id 0 ; Query GL50803_16548-t26_1-p1 ; Align 748439 3 726 utg47_pilon exonerate:protein2genome:local gene 748504 750538 3144 - . gene_id 0 ; sequence GL50803_16549-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 748504 750538 . - . utg47_pilon exonerate:protein2genome:local exon 748504 750538 . - . insertions 0 ; deletions 4 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 748504 750538 3144 - . alignment_id 0 ; Query GL50803_16549-t26_1-p1 ; Align 750539 1 1143 ; Align 749396 385 783 ; Align 748612 646 3 ; Align 748609 648 105 utg47_pilon exonerate:protein2genome:local gene 752741 753793 1249 - . gene_id 0 ; sequence GL50803_16550-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 753430 753793 . - . utg47_pilon exonerate:protein2genome:local exon 753430 753793 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 753428 753429 . - . intron_id 1 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 753394 753429 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 753394 753395 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 752741 753393 . - . utg47_pilon exonerate:protein2genome:local exon 752741 753393 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 752741 753793 1249 - . alignment_id 0 ; Query GL50803_16550-t26_1-p1 ; Align 753794 1 363 ; Align 753392 123 24 ; Align 753368 134 627 utg47_pilon exonerate:protein2genome:local gene 756737 757810 1240 - . gene_id 0 ; sequence GL50803_16552-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 756737 757810 . - . utg47_pilon exonerate:protein2genome:local exon 756737 757810 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 756737 757810 1240 - . alignment_id 0 ; Query GL50803_16552-t26_1-p1 ; Align 757811 1 1074 utg47_pilon exonerate:protein2genome:local gene 756173 756751 820 + . gene_id 0 ; sequence GL50803_16553-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 756173 756751 . + . utg47_pilon exonerate:protein2genome:local exon 756173 756751 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 756173 756751 820 + . alignment_id 0 ; Query GL50803_16553-t26_1-p1 ; Align 756173 1 579 utg47_pilon exonerate:protein2genome:local gene 758123 758701 888 + . gene_id 0 ; sequence GL50803_16554-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 758123 758701 . + . utg47_pilon exonerate:protein2genome:local exon 758123 758701 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 758123 758701 888 + . alignment_id 0 ; Query GL50803_16554-t26_1-p1 ; Align 758123 1 579 utg47_pilon exonerate:protein2genome:local gene 763836 767644 4758 + . gene_id 0 ; sequence GL50803_16556-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 763836 767644 . + . utg47_pilon exonerate:protein2genome:local exon 763836 767644 . + . insertions 6 ; deletions 5 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 763836 767644 4758 + . alignment_id 0 ; Query GL50803_16556-t26_1-p1 ; Align 763836 1 516 ; Align 764352 176 1242 ; Align 765600 590 552 ; Align 766154 775 1092 ; Align 767246 1140 399 utg11_pilon exonerate:protein2genome:local gene 452050 458850 8837 - . gene_id 0 ; sequence GL50803_16558-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 452907 458850 . - . utg11_pilon exonerate:protein2genome:local exon 452907 458850 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local splice5 452905 452906 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 452874 452906 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 452874 452875 . - . intron_id 0 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local cds 452050 452873 . - . utg11_pilon exonerate:protein2genome:local exon 452050 452873 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 452050 458850 8837 - . alignment_id 0 ; Query GL50803_16558-t26_1-p1 ; Align 458851 1 2742 ; Align 456109 917 3201 ; Align 452872 1985 273 ; Align 452599 2077 549 utg47_pilon exonerate:protein2genome:local gene 695579 697025 2253 - . gene_id 0 ; sequence GL50803_1656-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 695579 697025 . - . utg47_pilon exonerate:protein2genome:local exon 695579 697025 . - . insertions 0 ; deletions 4 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 695579 697025 2253 - . alignment_id 0 ; Query GL50803_1656-t26_1-p1 ; Align 697026 1 147 ; Align 696879 53 519 ; Align 696359 226 477 ; Align 695882 386 303 utg11_pilon exonerate:protein2genome:local gene 471421 473424 1796 - . gene_id 0 ; sequence GL50803_16560-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 471630 473424 . - . utg11_pilon exonerate:protein2genome:local exon 471630 473424 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 471628 471629 . - . intron_id 1 ; splice_site "TT" utg11_pilon exonerate:protein2genome:local intron 471600 471629 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 471600 471601 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 471421 471599 . - . utg11_pilon exonerate:protein2genome:local exon 471421 471599 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 471421 473424 1796 - . alignment_id 0 ; Query GL50803_16560-t26_1-p1 ; Align 473425 1 1398 ; Align 472027 468 396 ; Align 471598 601 177 utg11_pilon exonerate:protein2genome:local gene 574530 576497 3126 + . gene_id 0 ; sequence GL50803_16567-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 574530 576497 . + . utg11_pilon exonerate:protein2genome:local exon 574530 576497 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 574530 576497 3126 + . alignment_id 0 ; Query GL50803_16567-t26_1-p1 ; Align 574530 10 1968 utg11_pilon exonerate:protein2genome:local gene 584201 587026 3624 + . gene_id 0 ; sequence GL50803_16568-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 584201 587026 . + . utg11_pilon exonerate:protein2genome:local exon 584201 587026 . + . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 584201 587026 3624 + . alignment_id 0 ; Query GL50803_16568-t26_1-p1 ; Align 584201 1 1023 ; Align 585224 345 1803 utg11_pilon exonerate:protein2genome:local gene 600839 602008 1857 + . gene_id 0 ; sequence GL50803_16569-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 600839 602008 . + . utg11_pilon exonerate:protein2genome:local exon 600839 602008 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 600839 602008 1857 + . alignment_id 0 ; Query GL50803_16569-t26_1-p1 ; Align 600839 1 1170 utg47_pilon exonerate:protein2genome:local gene 697106 697420 541 + . gene_id 0 ; sequence GL50803_1657-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 697106 697420 . + . utg47_pilon exonerate:protein2genome:local exon 697106 697420 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 697106 697420 541 + . alignment_id 0 ; Query GL50803_1657-t26_1-p1 ; Align 697106 1 315 utg11_pilon exonerate:protein2genome:local gene 602220 604814 3543 + . gene_id 0 ; sequence GL50803_16570-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 602220 604814 . + . utg11_pilon exonerate:protein2genome:local exon 602220 604814 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 602220 604814 3543 + . alignment_id 0 ; Query GL50803_16570-t26_1-p1 ; Align 602220 1 2595 utg47_pilon exonerate:protein2genome:local gene 877676 878209 908 + . gene_id 0 ; sequence GL50803_16572-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 877676 878209 . + . utg47_pilon exonerate:protein2genome:local exon 877676 878209 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 877676 878209 908 + . alignment_id 0 ; Query GL50803_16572-t26_1-p1 ; Align 877676 1 534 utg47_pilon exonerate:protein2genome:local gene 878297 880112 2552 - . gene_id 0 ; sequence GL50803_16573-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 878297 880112 . - . utg47_pilon exonerate:protein2genome:local exon 878297 880112 . - . insertions 0 ; deletions 2 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 878297 880112 2552 - . alignment_id 0 ; Query GL50803_16573-t26_1-p1 ; Align 880113 1 1293 ; Align 878818 433 288 ; Align 878528 530 231 utg47_pilon exonerate:protein2genome:local gene 887806 891143 4245 + . gene_id 0 ; sequence GL50803_16574-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 887806 891143 . + . utg47_pilon exonerate:protein2genome:local exon 887806 891143 . + . insertions 0 ; deletions 2 ; frameshifts 5 utg47_pilon exonerate:protein2genome:local similarity 887806 891143 4245 + . alignment_id 0 ; Query GL50803_16574-t26_1-p1 ; Align 887806 1 420 ; Align 888227 141 846 ; Align 889074 423 546 ; Align 889622 606 444 ; Align 890067 754 63 ; Align 890130 776 1014 utg47_pilon exonerate:protein2genome:local gene 925898 929125 4651 - . gene_id 0 ; sequence GL50803_16575-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 925898 929125 . - . utg47_pilon exonerate:protein2genome:local exon 925898 929125 . - . insertions 0 ; deletions 9 utg47_pilon exonerate:protein2genome:local similarity 925898 929125 4651 - . alignment_id 0 ; Query GL50803_16575-t26_1-p1 ; Align 929126 1 219 ; Align 928907 78 765 ; Align 928142 334 15 ; Align 928127 343 2229 utg47_pilon exonerate:protein2genome:local gene 931936 933804 2274 - . gene_id 0 ; sequence GL50803_16577-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 931936 933804 . - . utg47_pilon exonerate:protein2genome:local exon 931936 933804 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 931936 933804 2274 - . alignment_id 0 ; Query GL50803_16577-t26_1-p1 ; Align 933805 11 1728 ; Align 932077 588 45 ; Align 932032 604 96 utg47_pilon exonerate:protein2genome:local gene 935201 937814 3244 - . gene_id 0 ; sequence GL50803_16578-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 935201 937814 . - . utg47_pilon exonerate:protein2genome:local exon 935201 937814 . - . insertions 0 ; deletions 1 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 935201 937814 3244 - . alignment_id 0 ; Query GL50803_16578-t26_1-p1 ; Align 937815 7 828 ; Align 936987 284 453 ; Align 936530 435 1329 utg47_pilon exonerate:protein2genome:local gene 2048471 2049445 980 - . gene_id 0 ; sequence GL50803_16581-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2048471 2049445 . - . utg47_pilon exonerate:protein2genome:local exon 2048471 2049445 . - . insertions 15 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2048471 2049445 980 - . alignment_id 0 ; Query GL50803_16581-t26_1-p1 ; Align 2049446 44 174 ; Align 2049272 103 705 ; Align 2048552 338 81 utg47_pilon exonerate:protein2genome:local gene 2044612 2045274 1019 + . gene_id 0 ; sequence GL50803_16582-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2044612 2045274 . + . utg47_pilon exonerate:protein2genome:local exon 2044612 2045274 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2044612 2045274 1019 + . alignment_id 0 ; Query GL50803_16582-t26_1-p1 ; Align 2044612 1 663 utg47_pilon exonerate:protein2genome:local gene 2016119 2018617 3022 - . gene_id 0 ; sequence GL50803_16585-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2016119 2018617 . - . utg47_pilon exonerate:protein2genome:local exon 2016119 2018617 . - . insertions 9 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2016119 2018617 3022 - . alignment_id 0 ; Query GL50803_16585-t26_1-p1 ; Align 2018618 595 729 ; Align 2017880 838 1761 utg47_pilon exonerate:protein2genome:local gene 2014473 2015393 1162 - . gene_id 0 ; sequence GL50803_16587-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2014473 2015393 . - . utg47_pilon exonerate:protein2genome:local exon 2014473 2015393 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2014473 2015393 1162 - . alignment_id 0 ; Query GL50803_16587-t26_1-p1 ; Align 2015394 1 921 utg47_pilon exonerate:protein2genome:local gene 1995786 1996148 526 - . gene_id 0 ; sequence GL50803_16588-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1995786 1996148 . - . utg47_pilon exonerate:protein2genome:local exon 1995786 1996148 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1995786 1996148 526 - . alignment_id 0 ; Query GL50803_16588-t26_1-p1 ; Align 1996149 1 264 ; Align 1995885 90 99 utg731_pilon exonerate:protein2genome:local gene 704689 711459 10195 + . gene_id 0 ; sequence GL50803_16592-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 704689 711459 . + . utg731_pilon exonerate:protein2genome:local exon 704689 711459 . + . insertions 12 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 704689 711459 10195 + . alignment_id 0 ; Query GL50803_16592-t26_1-p1 ; Align 704689 1 492 ; Align 705181 166 5427 ; Align 710614 1975 12 ; Align 710629 1979 132 ; Align 710764 2023 696 utg731_pilon exonerate:protein2genome:local gene 726551 729625 4348 - . gene_id 0 ; sequence GL50803_16595-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 726551 729625 . - . utg731_pilon exonerate:protein2genome:local exon 726551 729625 . - . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 726551 729625 4348 - . alignment_id 0 ; Query GL50803_16595-t26_1-p1 ; Align 729626 784 1881 ; Align 727745 1412 198 ; Align 727547 1480 996 utg731_pilon exonerate:protein2genome:local gene 734116 735903 2555 - . gene_id 0 ; sequence GL50803_16596-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 734116 735903 . - . utg731_pilon exonerate:protein2genome:local exon 734116 735903 . - . insertions 3 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 734116 735903 2555 - . alignment_id 0 ; Query GL50803_16596-t26_1-p1 ; Align 735904 1 381 ; Align 735523 129 60 ; Align 735460 149 894 ; Align 734566 450 450 utg349_pilon exonerate:protein2genome:local gene 1115650 1116453 967 + . gene_id 0 ; sequence GL50803_16598-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1115650 1116453 . + . utg349_pilon exonerate:protein2genome:local exon 1115650 1116453 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1115650 1116453 967 + . alignment_id 0 ; Query GL50803_16598-t26_1-p1 ; Align 1115650 1 489 ; Align 1116139 165 315 utg349_pilon exonerate:protein2genome:local gene 1137461 1142920 6918 + . gene_id 0 ; sequence GL50803_16599-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1137461 1142920 . + . utg349_pilon exonerate:protein2genome:local exon 1137461 1142920 . + . insertions 9 ; deletions 7 utg349_pilon exonerate:protein2genome:local similarity 1137461 1142920 6918 + . alignment_id 0 ; Query GL50803_16599-t26_1-p1 ; Align 1137461 367 327 ; Align 1137788 477 381 ; Align 1138178 604 291 ; Align 1138469 702 1068 ; Align 1139537 1059 1053 ; Align 1140590 1411 141 ; Align 1140731 1460 2163 ; Align 1142894 2182 27 utg349_pilon exonerate:protein2genome:local gene 1142930 1144840 2334 + . gene_id 0 ; sequence GL50803_16601-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1142930 1144840 . + . utg349_pilon exonerate:protein2genome:local exon 1142930 1144840 . + . insertions 0 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 1142930 1144840 2334 + . alignment_id 0 ; Query GL50803_16601-t26_1-p1 ; Align 1142930 1 330 ; Align 1143260 112 204 ; Align 1143464 181 18 ; Align 1143482 190 411 ; Align 1143893 328 948 utg349_pilon exonerate:protein2genome:local gene 1150811 1153153 3284 + . gene_id 0 ; sequence GL50803_16602-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1150811 1153153 . + . utg349_pilon exonerate:protein2genome:local exon 1150811 1153153 . + . insertions 9 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 1150811 1153153 3284 + . alignment_id 0 ; Query GL50803_16602-t26_1-p1 ; Align 1150811 1 1647 ; Align 1152458 553 234 ; Align 1152701 631 63 ; Align 1152764 653 390 utg349_pilon exonerate:protein2genome:local gene 761686 765591 4806 - . gene_id 0 ; sequence GL50803_16603-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 761686 765591 . - . utg349_pilon exonerate:protein2genome:local exon 761686 765591 . - . insertions 3 ; deletions 7 utg349_pilon exonerate:protein2genome:local similarity 761686 765591 4806 - . alignment_id 0 ; Query GL50803_16603-t26_1-p1 ; Align 765592 1 597 ; Align 764995 201 159 ; Align 764836 255 186 ; Align 764647 317 528 ; Align 764119 497 285 ; Align 763834 593 2148 utg349_pilon exonerate:protein2genome:local gene 749222 755338 8691 + . gene_id 0 ; sequence GL50803_16604-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 749222 755338 . + . utg349_pilon exonerate:protein2genome:local exon 749222 755338 . + . insertions 12 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 749222 755338 8691 + . alignment_id 0 ; Query GL50803_16604-t26_1-p1 ; Align 749222 1 1494 ; Align 750722 499 3537 ; Align 754265 1678 1074 utg349_pilon exonerate:protein2genome:local gene 746619 749192 3646 - . gene_id 0 ; sequence GL50803_16605-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 746619 749192 . - . utg349_pilon exonerate:protein2genome:local exon 746619 749192 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 746619 749192 3646 - . alignment_id 0 ; Query GL50803_16605-t26_1-p1 ; Align 749193 1 1344 ; Align 747849 450 1230 utg349_pilon exonerate:protein2genome:local gene 741757 744279 2763 - . gene_id 0 ; sequence GL50803_16606-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 741757 744279 . - . utg349_pilon exonerate:protein2genome:local exon 741757 744279 . - . insertions 3 ; deletions 9 utg349_pilon exonerate:protein2genome:local similarity 741757 744279 2763 - . alignment_id 0 ; Query GL50803_16606-t26_1-p1 ; Align 744280 1 645 ; Align 743632 216 204 ; Align 743428 286 282 ; Align 743146 381 600 ; Align 742546 585 204 ; Align 742342 654 249 ; Align 742093 738 336 utg349_pilon exonerate:protein2genome:local gene 738977 739999 1518 + . gene_id 0 ; sequence GL50803_16607-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 738977 739999 . + . utg349_pilon exonerate:protein2genome:local exon 738977 739999 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 738977 739999 1518 + . alignment_id 0 ; Query GL50803_16607-t26_1-p1 ; Align 738977 1 1023 utg349_pilon exonerate:protein2genome:local gene 1657003 1658160 1763 + . gene_id 0 ; sequence GL50803_16612-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1657003 1658160 . + . utg349_pilon exonerate:protein2genome:local exon 1657003 1658160 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1657003 1658160 1763 + . alignment_id 0 ; Query GL50803_16612-t26_1-p1 ; Align 1657003 1 921 ; Align 1657924 309 237 utg349_pilon exonerate:protein2genome:local gene 1654000 1656846 4167 - . gene_id 0 ; sequence GL50803_16613-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1654000 1656846 . - . utg349_pilon exonerate:protein2genome:local exon 1654000 1656846 . - . insertions 0 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 1654000 1656846 4167 - . alignment_id 0 ; Query GL50803_16613-t26_1-p1 ; Align 1656847 1 1380 ; Align 1655467 464 510 ; Align 1654957 635 957 utg349_pilon exonerate:protein2genome:local gene 1626024 1627652 2236 + . gene_id 0 ; sequence GL50803_16615-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1626024 1626784 . + . utg349_pilon exonerate:protein2genome:local exon 1626024 1626784 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1626785 1626786 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1626785 1626814 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1626813 1626814 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1626815 1627652 . + . utg349_pilon exonerate:protein2genome:local exon 1626815 1627652 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1626024 1627652 2236 + . alignment_id 0 ; Query GL50803_16615-t26_1-p1 ; Align 1626024 1 681 ; Align 1626705 229 78 ; Align 1626816 256 837 utg265_pilon exonerate:protein2genome:local gene 581925 583061 1722 - . gene_id 0 ; sequence GL50803_16622-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 581925 583061 . - . utg265_pilon exonerate:protein2genome:local exon 581925 583061 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 581925 583061 1722 - . alignment_id 0 ; Query GL50803_16622-t26_1-p1 ; Align 583062 1 36 ; Align 583026 14 1101 utg265_pilon exonerate:protein2genome:local gene 581411 581911 704 + . gene_id 0 ; sequence GL50803_16623-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 581411 581911 . + . utg265_pilon exonerate:protein2genome:local exon 581411 581911 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 581411 581911 704 + . alignment_id 0 ; Query GL50803_16623-t26_1-p1 ; Align 581411 1 501 utg265_pilon exonerate:protein2genome:local gene 515018 565331 3197 - . gene_id 0 ; sequence GL50803_16629-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 563165 565331 . - . utg265_pilon exonerate:protein2genome:local exon 563165 565331 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 563163 563164 . - . intron_id 1 ; splice_site "AT" utg265_pilon exonerate:protein2genome:local intron 515053 563164 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 515053 515054 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 515018 515052 . - . utg265_pilon exonerate:protein2genome:local exon 515018 515052 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 515018 565331 3197 - . alignment_id 0 ; Query GL50803_16629-t26_1-p1 ; Align 565332 1 2166 ; Align 515051 724 33 utg265_pilon exonerate:protein2genome:local gene 603536 607333 5825 - . gene_id 0 ; sequence GL50803_16630-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 603536 607333 . - . utg265_pilon exonerate:protein2genome:local exon 603536 607333 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 603536 607333 5825 - . alignment_id 0 ; Query GL50803_16630-t26_1-p1 ; Align 607334 1 1914 ; Align 605420 640 1884 utg64_pilon exonerate:protein2genome:local gene 280846 337916 3212 + . gene_id 0 ; sequence GL50803_16635-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 280846 280929 . + . utg64_pilon exonerate:protein2genome:local exon 280846 280929 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 280930 280931 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 280930 335393 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 335392 335393 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 335394 337916 . + . utg64_pilon exonerate:protein2genome:local exon 335394 337916 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 280846 337916 3212 + . alignment_id 0 ; Query GL50803_16635-t26_1-p1 ; Align 280846 445 84 ; Align 335394 473 2523 utg64_pilon exonerate:protein2genome:local gene 315962 316642 1140 - . gene_id 0 ; sequence GL50803_16636-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 315962 316642 . - . utg64_pilon exonerate:protein2genome:local exon 315962 316642 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 315962 316642 1140 - . alignment_id 0 ; Query GL50803_16636-t26_1-p1 ; Align 316643 1 681 utg64_pilon exonerate:protein2genome:local gene 314948 315853 1245 - . gene_id 0 ; sequence GL50803_16637-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 314948 315853 . - . utg64_pilon exonerate:protein2genome:local exon 314948 315853 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 314948 315853 1245 - . alignment_id 0 ; Query GL50803_16637-t26_1-p1 ; Align 315854 1 906 utg64_pilon exonerate:protein2genome:local gene 309393 311138 2410 + . gene_id 0 ; sequence GL50803_16638-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 309393 311138 . + . utg64_pilon exonerate:protein2genome:local exon 309393 311138 . + . insertions 0 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 309393 311138 2410 + . alignment_id 0 ; Query GL50803_16638-t26_1-p1 ; Align 309393 1 702 ; Align 310095 239 1044 utg64_pilon exonerate:protein2genome:local gene 307451 309214 2921 - . gene_id 0 ; sequence GL50803_16639-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 307451 309214 . - . utg64_pilon exonerate:protein2genome:local exon 307451 309214 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 307451 309214 2921 - . alignment_id 0 ; Query GL50803_16639-t26_1-p1 ; Align 309215 1 1764 utg64_pilon exonerate:protein2genome:local gene 306416 307321 1322 + . gene_id 0 ; sequence GL50803_16640-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 306416 307321 . + . utg64_pilon exonerate:protein2genome:local exon 306416 307321 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 306416 307321 1322 + . alignment_id 0 ; Query GL50803_16640-t26_1-p1 ; Align 306416 1 906 utg64_pilon exonerate:protein2genome:local gene 301312 302780 1812 + . gene_id 0 ; sequence GL50803_16641-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 301312 302780 . + . utg64_pilon exonerate:protein2genome:local exon 301312 302780 . + . insertions 3 ; deletions 0 ; frameshifts 5 utg64_pilon exonerate:protein2genome:local similarity 301312 302780 1812 + . alignment_id 0 ; Query GL50803_16641-t26_1-p1 ; Align 301312 4 96 ; Align 301413 36 654 ; Align 302070 254 711 utg349_pilon exonerate:protein2genome:local gene 364439 368776 4764 - . gene_id 0 ; sequence GL50803_16642-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 364439 368776 . - . utg349_pilon exonerate:protein2genome:local exon 364439 368776 . - . insertions 0 ; deletions 11 utg349_pilon exonerate:protein2genome:local similarity 364439 368776 4764 - . alignment_id 0 ; Query GL50803_16642-t26_1-p1 ; Align 368777 1 1557 ; Align 367220 521 6 ; Align 367214 525 288 ; Align 366926 622 330 ; Align 366596 733 294 ; Align 366302 835 180 ; Align 366122 896 1158 ; Align 364964 1283 525 utg212_pilon exonerate:protein2genome:local gene 379364 380113 899 + . gene_id 0 ; sequence GL50803_16647-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 379364 380113 . + . utg212_pilon exonerate:protein2genome:local exon 379364 380113 . + . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local similarity 379364 380113 899 + . alignment_id 0 ; Query GL50803_16647-t26_1-p1 ; Align 379364 1 546 ; Align 379910 184 204 utg212_pilon exonerate:protein2genome:local gene 371076 373391 3778 + . gene_id 0 ; sequence GL50803_16648-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 371076 373391 . + . utg212_pilon exonerate:protein2genome:local exon 371076 373391 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 371076 373391 3778 + . alignment_id 0 ; Query GL50803_16648-t26_1-p1 ; Align 371076 1 2316 utg212_pilon exonerate:protein2genome:local gene 363630 366800 4229 - . gene_id 0 ; sequence GL50803_16650-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 363630 366800 . - . utg212_pilon exonerate:protein2genome:local exon 363630 366800 . - . insertions 9 ; deletions 2 utg212_pilon exonerate:protein2genome:local similarity 363630 366800 4229 - . alignment_id 0 ; Query GL50803_16650-t26_1-p1 ; Align 366801 1 1875 ; Align 364926 627 72 ; Align 364854 652 99 ; Align 364746 685 1116 utg212_pilon exonerate:protein2genome:local gene 335826 336287 781 + . gene_id 0 ; sequence GL50803_16652-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 335826 336287 . + . utg212_pilon exonerate:protein2genome:local exon 335826 336287 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 335826 336287 781 + . alignment_id 0 ; Query GL50803_16652-t26_1-p1 ; Align 335826 1 462 utg212_pilon exonerate:protein2genome:local gene 332100 335072 4480 - . gene_id 0 ; sequence GL50803_16653-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 332100 335072 . - . utg212_pilon exonerate:protein2genome:local exon 332100 335072 . - . insertions 9 ; deletions 5 ; frameshifts 9 utg212_pilon exonerate:protein2genome:local similarity 332100 335072 4480 - . alignment_id 0 ; Query GL50803_16653-t26_1-p1 ; Align 335073 1 339 ; Align 334734 115 48 ; Align 334684 132 843 ; Align 333839 414 1491 ; Align 332339 911 21 ; Align 332313 918 39 ; Align 332274 933 174 utg11_pilon exonerate:protein2genome:local gene 140454 142067 2400 - . gene_id 0 ; sequence GL50803_16658-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 140454 142067 . - . utg11_pilon exonerate:protein2genome:local exon 140454 142067 . - . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 140454 142067 2400 - . alignment_id 0 ; Query GL50803_16658-t26_1-p1 ; Align 142068 1 342 ; Align 141726 116 780 ; Align 140943 376 489 utg11_pilon exonerate:protein2genome:local gene 154562 155782 1719 - . gene_id 0 ; sequence GL50803_16659-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 154562 155782 . - . utg11_pilon exonerate:protein2genome:local exon 154562 155782 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 154562 155782 1719 - . alignment_id 0 ; Query GL50803_16659-t26_1-p1 ; Align 155783 4 1221 utg11_pilon exonerate:protein2genome:local gene 160550 163048 4090 - . gene_id 0 ; sequence GL50803_16660-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 160550 163048 . - . utg11_pilon exonerate:protein2genome:local exon 160550 163048 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 160550 163048 4090 - . alignment_id 0 ; Query GL50803_16660-t26_1-p1 ; Align 163049 20 2388 ; Align 160661 818 111 utg11_pilon exonerate:protein2genome:local gene 1072693 1073532 1356 + . gene_id 0 ; sequence GL50803_16663-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1072693 1073532 . + . utg11_pilon exonerate:protein2genome:local exon 1072693 1073532 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1072693 1073532 1356 + . alignment_id 0 ; Query GL50803_16663-t26_1-p1 ; Align 1072693 1 684 ; Align 1073380 229 153 utg11_pilon exonerate:protein2genome:local gene 1085872 1088574 4263 + . gene_id 0 ; sequence GL50803_16667-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1085872 1088574 . + . utg11_pilon exonerate:protein2genome:local exon 1085872 1088574 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1085872 1088574 4263 + . alignment_id 0 ; Query GL50803_16667-t26_1-p1 ; Align 1085872 4 1392 ; Align 1087264 469 1311 utg11_pilon exonerate:protein2genome:local gene 1088592 1090667 3135 - . gene_id 0 ; sequence GL50803_16668-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1088592 1090667 . - . utg11_pilon exonerate:protein2genome:local exon 1088592 1090667 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1088592 1090667 3135 - . alignment_id 0 ; Query GL50803_16668-t26_1-p1 ; Align 1090668 4 390 ; Align 1090275 134 1683 utg11_pilon exonerate:protein2genome:local gene 1097962 1098252 451 + . gene_id 0 ; sequence GL50803_16670-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1097962 1098252 . + . utg11_pilon exonerate:protein2genome:local exon 1097962 1098252 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1097962 1098252 451 + . alignment_id 0 ; Query GL50803_16670-t26_1-p1 ; Align 1097962 1 291 utg11_pilon exonerate:protein2genome:local gene 1108885 1110720 2799 + . gene_id 0 ; sequence GL50803_16671-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1108885 1110720 . + . utg11_pilon exonerate:protein2genome:local exon 1108885 1110720 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1108885 1110720 2799 + . alignment_id 0 ; Query GL50803_16671-t26_1-p1 ; Align 1108885 1 1836 utg11_pilon exonerate:protein2genome:local gene 1117648 1119879 2744 + . gene_id 0 ; sequence GL50803_16672-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1117648 1119879 . + . utg11_pilon exonerate:protein2genome:local exon 1117648 1119879 . + . insertions 9 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1117648 1119879 2744 + . alignment_id 0 ; Query GL50803_16672-t26_1-p1 ; Align 1117648 220 36 ; Align 1117687 232 1107 ; Align 1118797 601 141 ; Align 1118941 648 939 utg47_pilon exonerate:protein2genome:local gene 2115289 2117439 1416 - . gene_id 0 ; sequence GL50803_16674-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2115289 2117439 . - . utg47_pilon exonerate:protein2genome:local exon 2115289 2117439 . - . insertions 15 ; deletions 7 utg47_pilon exonerate:protein2genome:local similarity 2115289 2117439 1416 - . alignment_id 0 ; Query GL50803_16674-t26_1-p1 ; Align 2117440 219 528 ; Align 2116912 396 201 ; Align 2116711 466 180 ; Align 2116519 526 570 ; Align 2115949 718 27 ; Align 2115922 728 459 ; Align 2115460 881 171 utg47_pilon exonerate:protein2genome:local gene 2123881 2124894 1317 + . gene_id 0 ; sequence GL50803_16675-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2123881 2124894 . + . utg47_pilon exonerate:protein2genome:local exon 2123881 2124894 . + . insertions 12 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2123881 2124894 1317 + . alignment_id 0 ; Query GL50803_16675-t26_1-p1 ; Align 2123881 1 594 ; Align 2124487 199 408 utg47_pilon exonerate:protein2genome:local gene 2131833 2133273 1297 + . gene_id 0 ; sequence GL50803_16677-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2131833 2133273 . + . utg47_pilon exonerate:protein2genome:local exon 2131833 2133273 . + . insertions 3 ; deletions 4 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 2131833 2133273 1297 + . alignment_id 0 ; Query GL50803_16677-t26_1-p1 ; Align 2131833 1 564 ; Align 2132400 189 363 ; Align 2132763 311 333 ; Align 2133096 425 111 ; Align 2133208 462 66 utg47_pilon exonerate:protein2genome:local gene 2147001 2147963 1301 + . gene_id 0 ; sequence GL50803_16678-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2147001 2147963 . + . utg47_pilon exonerate:protein2genome:local exon 2147001 2147963 . + . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 2147001 2147963 1301 + . alignment_id 0 ; Query GL50803_16678-t26_1-p1 ; Align 2147001 1 237 ; Align 2147238 85 726 utg47_pilon exonerate:protein2genome:local gene 2149224 2151035 1896 - . gene_id 0 ; sequence GL50803_16679-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2149782 2151035 . - . utg47_pilon exonerate:protein2genome:local exon 2149782 2151035 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 2149780 2149781 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 2149734 2149781 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 2149734 2149735 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2149224 2149733 . - . utg47_pilon exonerate:protein2genome:local exon 2149224 2149733 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 2149224 2151035 1896 - . alignment_id 0 ; Query GL50803_16679-t26_1-p1 ; Align 2151036 1 1254 ; Align 2149734 419 99 ; Align 2149635 455 411 utg731_pilon exonerate:protein2genome:local gene 309619 311613 2294 + . gene_id 0 ; sequence GL50803_16681-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 309619 311613 . + . utg731_pilon exonerate:protein2genome:local exon 309619 311613 . + . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 309619 311613 2294 + . alignment_id 0 ; Query GL50803_16681-t26_1-p1 ; Align 309619 1 72 ; Align 309697 25 858 ; Align 310558 311 1056 utg1966_pilon exonerate:protein2genome:local gene 149746 150588 1003 + . gene_id 0 ; sequence GL50803_16686-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 149746 150588 . + . utg1966_pilon exonerate:protein2genome:local exon 149746 150588 . + . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 149746 150588 1003 + . alignment_id 0 ; Query GL50803_16686-t26_1-p1 ; Align 149746 239 843 utg47_pilon exonerate:protein2genome:local gene 21285 21404 112 + . gene_id 0 ; sequence GL50803_16687-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 21285 21404 . + . utg47_pilon exonerate:protein2genome:local exon 21285 21404 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 21285 21404 112 + . alignment_id 0 ; Query GL50803_16687-t26_1-p1 ; Align 21285 148 93 ; Align 21378 181 27 utg364_pilon exonerate:protein2genome:local gene 39656 39775 112 - . gene_id 0 ; sequence GL50803_16687-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 39656 39775 . - . utg364_pilon exonerate:protein2genome:local exon 39656 39775 . - . insertions 0 ; deletions 2 utg364_pilon exonerate:protein2genome:local similarity 39656 39775 112 - . alignment_id 0 ; Query GL50803_16687-t26_1-p1 ; Align 39776 148 93 ; Align 39683 181 27 utg1966_pilon exonerate:protein2genome:local gene 157292 157735 286 + . gene_id 0 ; sequence GL50803_16689-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 157292 157735 . + . utg1966_pilon exonerate:protein2genome:local exon 157292 157735 . + . insertions 9 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 157292 157735 286 + . alignment_id 0 ; Query GL50803_16689-t26_1-p1 ; Align 157292 1 252 ; Align 157553 85 183 utg1966_pilon exonerate:protein2genome:local gene 70020 70463 286 - . gene_id 0 ; sequence GL50803_16689-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 70020 70463 . - . utg1966_pilon exonerate:protein2genome:local exon 70020 70463 . - . insertions 9 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 70020 70463 286 - . alignment_id 0 ; Query GL50803_16689-t26_1-p1 ; Align 70464 1 252 ; Align 70203 85 183 utg265_pilon exonerate:protein2genome:local gene 308871 310070 1378 - . gene_id 0 ; sequence GL50803_16690-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 308871 310070 . - . utg265_pilon exonerate:protein2genome:local exon 308871 310070 . - . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 308871 310070 1378 - . alignment_id 0 ; Query GL50803_16690-t26_1-p1 ; Align 310071 1 771 ; Align 309300 259 135 ; Align 309165 307 294 utg1966_pilon exonerate:protein2genome:local gene 62719 63144 407 - . gene_id 0 ; sequence GL50803_16692-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 62719 63144 . - . utg1966_pilon exonerate:protein2genome:local exon 62719 63144 . - . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 62719 63144 407 - . alignment_id 0 ; Query GL50803_16692-t26_1-p1 ; Align 63145 1 426 utg265_pilon exonerate:protein2genome:local gene 311910 312926 837 + . gene_id 0 ; sequence GL50803_16693-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 311910 312926 . + . utg265_pilon exonerate:protein2genome:local exon 311910 312926 . + . insertions 9 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 311910 312926 837 + . alignment_id 0 ; Query GL50803_16693-t26_1-p1 ; Align 311910 1 240 ; Align 312156 81 93 ; Align 312249 115 564 ; Align 312816 303 111 utg1966_pilon exonerate:protein2genome:local gene 73287 74216 797 + . gene_id 0 ; sequence GL50803_16697-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 73287 74216 . + . utg1966_pilon exonerate:protein2genome:local exon 73287 74216 . + . insertions 0 ; deletions 7 utg1966_pilon exonerate:protein2genome:local similarity 73287 74216 797 + . alignment_id 0 ; Query GL50803_16697-t26_1-p1 ; Align 73287 1 684 ; Align 73971 233 159 ; Align 74130 289 87 utg265_pilon exonerate:protein2genome:local gene 350496 353009 3635 - . gene_id 0 ; sequence GL50803_16699-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 350496 353009 . - . utg265_pilon exonerate:protein2genome:local exon 350496 353009 . - . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 350496 353009 3635 - . alignment_id 0 ; Query GL50803_16699-t26_1-p1 ; Align 353010 856 1644 ; Align 351363 1404 867 utg265_pilon exonerate:protein2genome:local gene 359430 360545 1002 + . gene_id 0 ; sequence GL50803_16700-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 359430 360545 . + . utg265_pilon exonerate:protein2genome:local exon 359430 360545 . + . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 359430 360545 1002 + . alignment_id 0 ; Query GL50803_16700-t26_1-p1 ; Align 359430 1 504 ; Align 359934 170 189 ; Align 360123 235 423 utg1966_pilon exonerate:protein2genome:local gene 8572 12333 4435 + . gene_id 0 ; sequence GL50803_16701-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 8572 12333 . + . utg1966_pilon exonerate:protein2genome:local exon 8572 12333 . + . insertions 3 ; deletions 10 ; frameshifts 3 utg1966_pilon exonerate:protein2genome:local similarity 8572 12333 4435 + . alignment_id 0 ; Query GL50803_16701-t26_1-p1 ; Align 8572 1 348 ; Align 8922 118 1290 ; Align 10212 550 381 ; Align 10593 679 813 ; Align 11406 954 108 ; Align 11517 990 486 ; Align 12004 1153 330 utg349_pilon exonerate:protein2genome:local gene 232692 233987 1886 - . gene_id 0 ; sequence GL50803_16707-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 232692 233987 . - . utg349_pilon exonerate:protein2genome:local exon 232692 233987 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 232692 233987 1886 - . alignment_id 0 ; Query GL50803_16707-t26_1-p1 ; Align 233988 1 1203 ; Align 232782 402 90 utg349_pilon exonerate:protein2genome:local gene 238503 240382 2502 - . gene_id 0 ; sequence GL50803_16708-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 238503 240382 . - . utg349_pilon exonerate:protein2genome:local exon 238503 240382 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 238503 240382 2502 - . alignment_id 0 ; Query GL50803_16708-t26_1-p1 ; Align 240383 1 135 ; Align 240247 46 171 ; Align 240076 104 1149 ; Align 238926 487 423 utg349_pilon exonerate:protein2genome:local gene 250235 256072 8720 - . gene_id 0 ; sequence GL50803_16709-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 250235 256072 . - . utg349_pilon exonerate:protein2genome:local exon 250235 256072 . - . insertions 6 ; deletions 3 ; frameshifts 6 utg349_pilon exonerate:protein2genome:local similarity 250235 256072 8720 - . alignment_id 0 ; Query GL50803_16709-t26_1-p1 ; Align 256073 1 981 ; Align 255090 329 273 ; Align 254815 421 1332 ; Align 253477 865 1359 ; Align 252116 1318 3 ; Align 252113 1320 1878 utg212_pilon exonerate:protein2genome:local gene 454290 455894 1343 - . gene_id 0 ; sequence GL50803_16713-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 454290 455894 . - . utg212_pilon exonerate:protein2genome:local exon 454290 455894 . - . insertions 0 ; deletions 4 ; frameshifts 3 utg212_pilon exonerate:protein2genome:local similarity 454290 455894 1343 - . alignment_id 0 ; Query GL50803_16713-t26_1-p1 ; Align 455895 1 84 ; Align 455809 29 18 ; Align 455791 36 903 ; Align 454888 339 366 ; Align 454521 461 9 ; Align 454512 465 222 utg212_pilon exonerate:protein2genome:local gene 446438 449705 4167 + . gene_id 0 ; sequence GL50803_16715-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 446438 449705 . + . utg212_pilon exonerate:protein2genome:local exon 446438 449705 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 446438 449705 4167 + . alignment_id 0 ; Query GL50803_16715-t26_1-p1 ; Align 446438 1 942 ; Align 447381 315 102 ; Align 447483 350 2223 utg308_pilon exonerate:protein2genome:local gene 588352 590373 2847 - . gene_id 0 ; sequence GL50803_16716-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 588352 590373 . - . utg308_pilon exonerate:protein2genome:local exon 588352 590373 . - . insertions 3 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 588352 590373 2847 - . alignment_id 0 ; Query GL50803_16716-t26_1-p1 ; Align 590374 1 582 ; Align 589789 195 642 ; Align 589147 410 795 utg212_pilon exonerate:protein2genome:local gene 438883 439668 1204 + . gene_id 0 ; sequence GL50803_16717-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 438883 439668 . + . utg212_pilon exonerate:protein2genome:local exon 438883 439668 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 438883 439668 1204 + . alignment_id 0 ; Query GL50803_16717-t26_1-p1 ; Align 438883 1 786 utg212_pilon exonerate:protein2genome:local gene 438163 438768 971 - . gene_id 0 ; sequence GL50803_16718-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 438163 438768 . - . utg212_pilon exonerate:protein2genome:local exon 438163 438768 . - . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 438163 438768 971 - . alignment_id 0 ; Query GL50803_16718-t26_1-p1 ; Align 438769 1 51 ; Align 438715 18 552 utg212_pilon exonerate:protein2genome:local gene 426793 429315 3929 + . gene_id 0 ; sequence GL50803_16720-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 426793 429315 . + . utg212_pilon exonerate:protein2genome:local exon 426793 429315 . + . insertions 6 ; deletions 2 ; frameshifts 6 utg212_pilon exonerate:protein2genome:local similarity 426793 429315 3929 + . alignment_id 0 ; Query GL50803_16720-t26_1-p1 ; Align 426793 1 228 ; Align 427023 78 369 ; Align 427398 201 882 ; Align 428281 495 99 ; Align 428382 529 552 ; Align 428935 713 381 utg212_pilon exonerate:protein2genome:local gene 415195 417065 2530 - . gene_id 0 ; sequence GL50803_16721-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 415195 417065 . - . utg212_pilon exonerate:protein2genome:local exon 415195 417065 . - . insertions 3 ; deletions 0 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 415195 417065 2530 - . alignment_id 0 ; Query GL50803_16721-t26_1-p1 ; Align 417066 1 36 ; Align 417028 13 516 ; Align 416509 185 1314 utg64_pilon exonerate:protein2genome:local gene 530398 531738 2088 - . gene_id 0 ; sequence GL50803_16722-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 530398 531738 . - . utg64_pilon exonerate:protein2genome:local exon 530398 531738 . - . insertions 0 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 530398 531738 2088 - . alignment_id 0 ; Query GL50803_16722-t26_1-p1 ; Align 531739 1 597 ; Align 531142 203 744 utg64_pilon exonerate:protein2genome:local gene 526080 526889 1195 + . gene_id 0 ; sequence GL50803_16723-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 526080 526889 . + . utg64_pilon exonerate:protein2genome:local exon 526080 526889 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 526080 526889 1195 + . alignment_id 0 ; Query GL50803_16723-t26_1-p1 ; Align 526080 1 810 utg64_pilon exonerate:protein2genome:local gene 466161 467624 1972 + . gene_id 0 ; sequence GL50803_16728-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 466161 467624 . + . utg64_pilon exonerate:protein2genome:local exon 466161 467624 . + . insertions 0 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 466161 467624 1972 + . alignment_id 0 ; Query GL50803_16728-t26_1-p1 ; Align 466161 41 933 ; Align 467094 354 141 ; Align 467235 402 390 utg64_pilon exonerate:protein2genome:local gene 465043 466089 1403 + . gene_id 0 ; sequence GL50803_16729-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 465043 466089 . + . utg64_pilon exonerate:protein2genome:local exon 465043 466089 . + . insertions 0 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 465043 466089 1403 + . alignment_id 0 ; Query GL50803_16729-t26_1-p1 ; Align 465043 1 846 ; Align 465889 284 72 ; Align 465961 311 129 utg47_pilon exonerate:protein2genome:local gene 1204511 1213507 8698 - . gene_id 0 ; sequence GL50803_16731-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1212412 1213507 . - . utg47_pilon exonerate:protein2genome:local exon 1212412 1213507 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 1212410 1212411 . - . intron_id 1 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 1212382 1212411 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1212382 1212383 . - . intron_id 0 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local cds 1205920 1212381 . - . utg47_pilon exonerate:protein2genome:local exon 1205920 1212381 . - . insertions 21 ; deletions 15 utg47_pilon exonerate:protein2genome:local splice5 1205918 1205919 . - . intron_id 2 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local intron 1205848 1205919 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1205848 1205849 . - . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1205435 1205847 . - . utg47_pilon exonerate:protein2genome:local exon 1205435 1205847 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1205433 1205434 . - . intron_id 3 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1205396 1205434 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 1205396 1205397 . - . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1204511 1205395 . - . utg47_pilon exonerate:protein2genome:local exon 1204511 1205395 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1204511 1213507 8698 - . alignment_id 0 ; Query GL50803_16731-t26_1-p1 ; Align 1213508 1 648 ; Align 1212860 219 444 ; Align 1212416 368 3 ; Align 1212380 370 132 ; Align 1212248 415 156 ; Align 1212092 469 72 ; Align 1212017 493 180 ; Align 1211834 553 2937 ; Align 1208897 1534 96 ; Align 1208789 1566 975 ; Align 1207814 1892 372 ; Align 1207439 2016 204 ; Align 1207235 2087 153 ; Align 1207082 2140 36 ; Align 1207046 2153 24 ; Align 1207022 2162 54 ; Align 1206968 2182 1047 ; Align 1205846 2532 132 ; Align 1205711 2576 276 ; Align 1205396 2668 684 ; Align 1204712 2898 201 utg47_pilon exonerate:protein2genome:local gene 1203406 1204176 865 - . gene_id 0 ; sequence GL50803_16732-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1203406 1204176 . - . utg47_pilon exonerate:protein2genome:local exon 1203406 1204176 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1203406 1204176 865 - . alignment_id 0 ; Query GL50803_16732-t26_1-p1 ; Align 1204177 1 771 utg47_pilon exonerate:protein2genome:local gene 1201568 1203358 2496 + . gene_id 0 ; sequence GL50803_16733-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1201568 1203358 . + . utg47_pilon exonerate:protein2genome:local exon 1201568 1203358 . + . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 1201568 1203358 2496 + . alignment_id 0 ; Query GL50803_16733-t26_1-p1 ; Align 1201568 1 1266 ; Align 1202834 424 303 ; Align 1203137 528 222 utg47_pilon exonerate:protein2genome:local gene 1190445 1198376 10165 - . gene_id 0 ; sequence GL50803_16734-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1190445 1198376 . - . utg47_pilon exonerate:protein2genome:local exon 1190445 1198376 . - . insertions 0 ; deletions 9 utg47_pilon exonerate:protein2genome:local similarity 1190445 1198376 10165 - . alignment_id 0 ; Query GL50803_16734-t26_1-p1 ; Align 1198377 1 4158 ; Align 1194219 1389 975 ; Align 1193244 1719 36 ; Align 1193208 1732 1113 ; Align 1192095 2104 1650 utg47_pilon exonerate:protein2genome:local gene 1180622 1183260 3425 - . gene_id 0 ; sequence GL50803_16736-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1180622 1183260 . - . utg47_pilon exonerate:protein2genome:local exon 1180622 1183260 . - . insertions 0 ; deletions 2 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1180622 1183260 3425 - . alignment_id 0 ; Query GL50803_16736-t26_1-p1 ; Align 1183261 327 1071 ; Align 1182190 685 150 ; Align 1182038 736 1416 utg47_pilon exonerate:protein2genome:local gene 1179339 1180593 1641 + . gene_id 0 ; sequence GL50803_16737-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1179339 1180593 . + . utg47_pilon exonerate:protein2genome:local exon 1179339 1180593 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1179339 1180593 1641 + . alignment_id 0 ; Query GL50803_16737-t26_1-p1 ; Align 1179339 1 531 ; Align 1179871 178 723 utg47_pilon exonerate:protein2genome:local gene 1609030 1612146 4761 + . gene_id 0 ; sequence GL50803_16745-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1609030 1612146 . + . utg47_pilon exonerate:protein2genome:local exon 1609030 1612146 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1609030 1612146 4761 + . alignment_id 0 ; Query GL50803_16745-t26_1-p1 ; Align 1609030 1 3117 utg47_pilon exonerate:protein2genome:local gene 1598788 1600620 2286 - . gene_id 0 ; sequence GL50803_16746-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1598788 1600620 . - . utg47_pilon exonerate:protein2genome:local exon 1598788 1600620 . - . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 1598788 1600620 2286 - . alignment_id 0 ; Query GL50803_16746-t26_1-p1 ; Align 1600621 1 1059 ; Align 1599562 357 207 ; Align 1599355 427 567 utg47_pilon exonerate:protein2genome:local gene 1596418 1598731 3189 - . gene_id 0 ; sequence GL50803_16747-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1596418 1598731 . - . utg47_pilon exonerate:protein2genome:local exon 1596418 1598731 . - . insertions 0 ; deletions 2 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 1596418 1598731 3189 - . alignment_id 0 ; Query GL50803_16747-t26_1-p1 ; Align 1598732 1 1242 ; Align 1597488 416 810 ; Align 1596676 686 12 ; Align 1596664 691 246 utg731_pilon exonerate:protein2genome:local gene 383119 387195 4594 - . gene_id 0 ; sequence GL50803_16750-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 383119 387195 . - . utg731_pilon exonerate:protein2genome:local exon 383119 387195 . - . insertions 12 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 383119 387195 4594 - . alignment_id 0 ; Query GL50803_16750-t26_1-p1 ; Align 387196 1 1692 ; Align 385492 565 1002 ; Align 384490 900 519 ; Align 383971 1075 852 utg731_pilon exonerate:protein2genome:local gene 381395 383092 2252 - . gene_id 0 ; sequence GL50803_16751-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 381395 383092 . - . utg731_pilon exonerate:protein2genome:local exon 381395 383092 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 381395 383092 2252 - . alignment_id 0 ; Query GL50803_16751-t26_1-p1 ; Align 383093 1 1698 utg731_pilon exonerate:protein2genome:local gene 354118 355230 1558 - . gene_id 0 ; sequence GL50803_16758-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 354118 355230 . - . utg731_pilon exonerate:protein2genome:local exon 354118 355230 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 354118 355230 1558 - . alignment_id 0 ; Query GL50803_16758-t26_1-p1 ; Align 355231 1 1113 utg64_pilon exonerate:protein2genome:local gene 561017 562783 2652 - . gene_id 0 ; sequence GL50803_16760-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 561017 562783 . - . utg64_pilon exonerate:protein2genome:local exon 561017 562783 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 561017 562783 2652 - . alignment_id 0 ; Query GL50803_16760-t26_1-p1 ; Align 562784 1 1767 utg64_pilon exonerate:protein2genome:local gene 388986 565116 3088 + . gene_id 0 ; sequence GL50803_16761-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 388986 389015 . + . utg64_pilon exonerate:protein2genome:local exon 388986 389015 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 389016 389017 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 389016 562884 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 562883 562884 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 562885 565116 . + . utg64_pilon exonerate:protein2genome:local exon 562885 565116 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 388986 565116 3088 + . alignment_id 0 ; Query GL50803_16761-t26_1-p1 ; Align 388986 41 30 ; Align 562885 52 2232 utg212_pilon exonerate:protein2genome:local gene 560515 562428 2757 - . gene_id 0 ; sequence GL50803_16765-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 560515 562428 . - . utg212_pilon exonerate:protein2genome:local exon 560515 562428 . - . insertions 0 ; deletions 2 utg212_pilon exonerate:protein2genome:local similarity 560515 562428 2757 - . alignment_id 0 ; Query GL50803_16765-t26_1-p1 ; Align 562429 1 999 ; Align 561430 335 195 ; Align 561235 401 720 utg212_pilon exonerate:protein2genome:local gene 566687 568408 2765 + . gene_id 0 ; sequence GL50803_16766-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 566687 568408 . + . utg212_pilon exonerate:protein2genome:local exon 566687 568408 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 566687 568408 2765 + . alignment_id 0 ; Query GL50803_16766-t26_1-p1 ; Align 566687 3 1722 utg212_pilon exonerate:protein2genome:local gene 570546 580061 13379 + . gene_id 0 ; sequence GL50803_16768-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 570546 580061 . + . utg212_pilon exonerate:protein2genome:local exon 570546 580061 . + . insertions 9 ; deletions 10 ; frameshifts 12 utg212_pilon exonerate:protein2genome:local similarity 570546 580061 13379 + . alignment_id 0 ; Query GL50803_16768-t26_1-p1 ; Align 570546 1 186 ; Align 570734 64 279 ; Align 571013 158 171 ; Align 571185 216 90 ; Align 571275 247 18 ; Align 571295 253 3 ; Align 571298 255 63 ; Align 571362 276 63 ; Align 571425 298 6 ; Align 571432 300 54 ; Align 571487 319 687 ; Align 572177 548 492 ; Align 572669 713 24 ; Align 572694 721 414 ; Align 573114 859 4383 ; Align 577498 2320 474 ; Align 577973 2478 393 ; Align 578366 2610 198 ; Align 578564 2677 924 ; Align 579489 2985 573 utg11_pilon exonerate:protein2genome:local gene 621630 637457 18922 - . gene_id 0 ; sequence GL50803_16772-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 621630 637457 . - . utg11_pilon exonerate:protein2genome:local exon 621630 637457 . - . insertions 6 ; deletions 6 utg11_pilon exonerate:protein2genome:local similarity 621630 637457 18922 - . alignment_id 0 ; Query GL50803_16772-t26_1-p1 ; Align 637458 1 1908 ; Align 635547 637 4845 ; Align 630699 2252 1875 ; Align 628824 2879 411 ; Align 628413 3019 1707 ; Align 626706 3589 5076 utg11_pilon exonerate:protein2genome:local gene 614759 617296 3901 + . gene_id 0 ; sequence GL50803_16773-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 614759 617296 . + . utg11_pilon exonerate:protein2genome:local exon 614759 617296 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 614759 617296 3901 + . alignment_id 0 ; Query GL50803_16773-t26_1-p1 ; Align 614759 2 2538 utg11_pilon exonerate:protein2genome:local gene 612526 614346 2614 + . gene_id 0 ; sequence GL50803_16774-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 612526 614346 . + . utg11_pilon exonerate:protein2genome:local exon 612526 614346 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 612526 614346 2614 + . alignment_id 0 ; Query GL50803_16774-t26_1-p1 ; Align 612526 1 1821 utg308_pilon exonerate:protein2genome:local gene 792491 793381 1497 + . gene_id 0 ; sequence GL50803_16779-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 792491 793381 . + . utg308_pilon exonerate:protein2genome:local exon 792491 793381 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 792491 793381 1497 + . alignment_id 0 ; Query GL50803_16779-t26_1-p1 ; Align 792491 1 891 utg265_pilon exonerate:protein2genome:local gene 858836 859984 1468 - . gene_id 0 ; sequence GL50803_16791-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 858836 859984 . - . utg265_pilon exonerate:protein2genome:local exon 858836 859984 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 858836 859984 1468 - . alignment_id 0 ; Query GL50803_16791-t26_1-p1 ; Align 859985 6 1149 utg265_pilon exonerate:protein2genome:local gene 838966 840318 2011 - . gene_id 0 ; sequence GL50803_16792-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 838966 840318 . - . utg265_pilon exonerate:protein2genome:local exon 838966 840318 . - . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 838966 840318 2011 - . alignment_id 0 ; Query GL50803_16792-t26_1-p1 ; Align 840319 1 882 ; Align 839437 298 60 ; Align 839377 319 411 utg265_pilon exonerate:protein2genome:local gene 833206 836928 4679 - . gene_id 0 ; sequence GL50803_16793-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 835162 836928 . - . utg265_pilon exonerate:protein2genome:local exon 835162 836928 . - . insertions 12 ; deletions 2 utg265_pilon exonerate:protein2genome:local splice5 835160 835161 . - . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 835129 835161 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 835129 835130 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 833206 835128 . - . utg265_pilon exonerate:protein2genome:local exon 833206 835128 . - . insertions 0 ; deletions 5 utg265_pilon exonerate:protein2genome:local similarity 833206 836928 4679 - . alignment_id 0 ; Query GL50803_16793-t26_1-p1 ; Align 836929 1 756 ; Align 836161 253 573 ; Align 835588 446 426 ; Align 835129 588 1845 ; Align 833284 1206 27 ; Align 833257 1217 51 utg265_pilon exonerate:protein2genome:local gene 831446 832132 1093 + . gene_id 0 ; sequence GL50803_16794-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 831446 832132 . + . utg265_pilon exonerate:protein2genome:local exon 831446 832132 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 831446 832132 1093 + . alignment_id 0 ; Query GL50803_16794-t26_1-p1 ; Align 831446 1 687 utg265_pilon exonerate:protein2genome:local gene 829858 831303 2074 - . gene_id 0 ; sequence GL50803_16795-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 829858 831303 . - . utg265_pilon exonerate:protein2genome:local exon 829858 831303 . - . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 829858 831303 2074 - . alignment_id 0 ; Query GL50803_16795-t26_1-p1 ; Align 831304 35 1389 ; Align 829915 501 57 utg265_pilon exonerate:protein2genome:local gene 826577 827314 977 + . gene_id 0 ; sequence GL50803_16796-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 826577 827314 . + . utg265_pilon exonerate:protein2genome:local exon 826577 827314 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 826577 827314 977 + . alignment_id 0 ; Query GL50803_16796-t26_1-p1 ; Align 826577 6 738 utg731_pilon exonerate:protein2genome:local gene 1044092 1047940 4336 + . gene_id 0 ; sequence GL50803_16801-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1044092 1047940 . + . utg731_pilon exonerate:protein2genome:local exon 1044092 1047940 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1044092 1047940 4336 + . alignment_id 0 ; Query GL50803_16801-t26_1-p1 ; Align 1044092 1 1896 ; Align 1045988 634 1545 ; Align 1047533 1150 408 utg731_pilon exonerate:protein2genome:local gene 1035756 1036628 1534 + . gene_id 0 ; sequence GL50803_16802-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1035756 1036628 . + . utg731_pilon exonerate:protein2genome:local exon 1035756 1036628 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1035756 1036628 1534 + . alignment_id 0 ; Query GL50803_16802-t26_1-p1 ; Align 1035756 1 873 utg731_pilon exonerate:protein2genome:local gene 1030427 1031869 2033 + . gene_id 0 ; sequence GL50803_16803-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1030427 1031869 . + . utg731_pilon exonerate:protein2genome:local exon 1030427 1031869 . + . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1030427 1031869 2033 + . alignment_id 0 ; Query GL50803_16803-t26_1-p1 ; Align 1030427 1 699 ; Align 1031126 236 123 ; Align 1031249 278 621 utg731_pilon exonerate:protein2genome:local gene 1022458 1029351 11430 - . gene_id 0 ; sequence GL50803_16804-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1022458 1029351 . - . utg731_pilon exonerate:protein2genome:local exon 1022458 1029351 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1022458 1029351 11430 - . alignment_id 0 ; Query GL50803_16804-t26_1-p1 ; Align 1029352 1 3675 ; Align 1025674 1226 3216 utg308_pilon exonerate:protein2genome:local gene 293144 298537 5775 - . gene_id 0 ; sequence GL50803_16805-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 293144 298537 . - . utg308_pilon exonerate:protein2genome:local exon 293144 298537 . - . insertions 24 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 293144 298537 5775 - . alignment_id 0 ; Query GL50803_16805-t26_1-p1 ; Align 298538 1 1518 ; Align 297017 507 96 ; Align 296918 539 300 ; Align 296612 639 1884 ; Align 294716 1267 1572 utg308_pilon exonerate:protein2genome:local gene 280582 282369 2376 + . gene_id 0 ; sequence GL50803_16806-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 280582 282369 . + . utg308_pilon exonerate:protein2genome:local exon 280582 282369 . + . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 280582 282369 2376 + . alignment_id 0 ; Query GL50803_16806-t26_1-p1 ; Align 280582 1 1383 ; Align 281965 464 405 utg308_pilon exonerate:protein2genome:local gene 253632 254585 1305 + . gene_id 0 ; sequence GL50803_16808-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 253632 254585 . + . utg308_pilon exonerate:protein2genome:local exon 253632 254585 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 253632 254585 1305 + . alignment_id 0 ; Query GL50803_16808-t26_1-p1 ; Align 253632 1 954 utg212_pilon exonerate:protein2genome:local gene 325386 327153 2146 - . gene_id 0 ; sequence GL50803_16810-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 325386 327153 . - . utg212_pilon exonerate:protein2genome:local exon 325386 327153 . - . insertions 15 ; deletions 3 ; frameshifts 7 utg212_pilon exonerate:protein2genome:local similarity 325386 327153 2146 - . alignment_id 0 ; Query GL50803_16810-t26_1-p1 ; Align 327154 1 687 ; Align 326464 230 57 ; Align 326407 250 3 ; Align 326402 251 465 ; Align 325935 407 267 ; Align 325656 496 51 ; Align 325604 513 111 ; Align 325491 551 105 utg212_pilon exonerate:protein2genome:local gene 321209 323671 3495 - . gene_id 0 ; sequence GL50803_16811-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 321209 323671 . - . utg212_pilon exonerate:protein2genome:local exon 321209 323671 . - . insertions 0 ; deletions 2 utg212_pilon exonerate:protein2genome:local similarity 321209 323671 3495 - . alignment_id 0 ; Query GL50803_16811-t26_1-p1 ; Align 323672 1 2157 ; Align 321515 722 306 utg212_pilon exonerate:protein2genome:local gene 320095 321115 1606 + . gene_id 0 ; sequence GL50803_16812-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 320095 321115 . + . utg212_pilon exonerate:protein2genome:local exon 320095 321115 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 320095 321115 1606 + . alignment_id 0 ; Query GL50803_16812-t26_1-p1 ; Align 320095 1 354 ; Align 320450 119 666 utg212_pilon exonerate:protein2genome:local gene 317337 319253 2254 + . gene_id 0 ; sequence GL50803_16813-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 317337 319253 . + . utg212_pilon exonerate:protein2genome:local exon 317337 319253 . + . insertions 9 ; deletions 4 utg212_pilon exonerate:protein2genome:local similarity 317337 319253 2254 + . alignment_id 0 ; Query GL50803_16813-t26_1-p1 ; Align 317337 1 570 ; Align 317910 191 213 ; Align 318123 263 180 ; Align 318303 325 426 ; Align 318729 468 384 ; Align 319119 596 135 utg212_pilon exonerate:protein2genome:local gene 316483 317268 1254 - . gene_id 0 ; sequence GL50803_16814-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 316483 317268 . - . utg212_pilon exonerate:protein2genome:local exon 316483 317268 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 316483 317268 1254 - . alignment_id 0 ; Query GL50803_16814-t26_1-p1 ; Align 317269 1 786 utg212_pilon exonerate:protein2genome:local gene 315479 316426 1395 + . gene_id 0 ; sequence GL50803_16815-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 315479 316426 . + . utg212_pilon exonerate:protein2genome:local exon 315479 316426 . + . insertions 0 ; deletions 2 utg212_pilon exonerate:protein2genome:local similarity 315479 316426 1395 + . alignment_id 0 ; Query GL50803_16815-t26_1-p1 ; Align 315479 1 864 ; Align 316343 291 84 utg212_pilon exonerate:protein2genome:local gene 311132 312502 2338 + . gene_id 0 ; sequence GL50803_16817-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 311132 312502 . + . utg212_pilon exonerate:protein2genome:local exon 311132 312502 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 311132 312502 2338 + . alignment_id 0 ; Query GL50803_16817-t26_1-p1 ; Align 311132 1 1371 utg212_pilon exonerate:protein2genome:local gene 307200 310541 5274 - . gene_id 0 ; sequence GL50803_16818-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 307200 310541 . - . utg212_pilon exonerate:protein2genome:local exon 307200 310541 . - . insertions 12 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 307200 310541 5274 - . alignment_id 0 ; Query GL50803_16818-t26_1-p1 ; Align 310542 1 2796 ; Align 307734 933 534 utg212_pilon exonerate:protein2genome:local gene 295029 298790 4702 - . gene_id 0 ; sequence GL50803_16819-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 295029 298790 . - . utg212_pilon exonerate:protein2genome:local exon 295029 298790 . - . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 295029 298790 4702 - . alignment_id 0 ; Query GL50803_16819-t26_1-p1 ; Align 298791 1 699 ; Align 298089 234 3060 utg212_pilon exonerate:protein2genome:local gene 292625 294985 3753 + . gene_id 0 ; sequence GL50803_16820-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 292625 294985 . + . utg212_pilon exonerate:protein2genome:local exon 292625 294985 . + . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 292625 294985 3753 + . alignment_id 0 ; Query GL50803_16820-t26_1-p1 ; Align 292625 1 2019 ; Align 294647 674 339 utg212_pilon exonerate:protein2genome:local gene 290225 291058 516 - . gene_id 0 ; sequence GL50803_16821-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 290225 291058 . - . utg212_pilon exonerate:protein2genome:local exon 290225 291058 . - . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local similarity 290225 291058 516 - . alignment_id 0 ; Query GL50803_16821-t26_1-p1 ; Align 291059 1 696 ; Align 290363 234 138 utg18_pilon exonerate:protein2genome:local gene 541704 542705 1593 - . gene_id 0 ; sequence GL50803_16823-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 541704 542705 . - . utg18_pilon exonerate:protein2genome:local exon 541704 542705 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 541704 542705 1593 - . alignment_id 0 ; Query GL50803_16823-t26_1-p1 ; Align 542706 1 1002 utg18_pilon exonerate:protein2genome:local gene 537611 540079 3918 + . gene_id 0 ; sequence GL50803_16824-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 537611 540079 . + . utg18_pilon exonerate:protein2genome:local exon 537611 540079 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 537611 540079 3918 + . alignment_id 0 ; Query GL50803_16824-t26_1-p1 ; Align 537611 1 2469 utg18_pilon exonerate:protein2genome:local gene 537764 538015 291 - . gene_id 0 ; sequence GL50803_16825-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 537764 538015 . - . utg18_pilon exonerate:protein2genome:local exon 537764 538015 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 537764 538015 291 - . alignment_id 0 ; Query GL50803_16825-t26_1-p1 ; Align 538016 1 252 utg18_pilon exonerate:protein2genome:local gene 536068 537558 1828 - . gene_id 0 ; sequence GL50803_16826-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 536068 537558 . - . utg18_pilon exonerate:protein2genome:local exon 536068 537558 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 536068 537558 1828 - . alignment_id 0 ; Query GL50803_16826-t26_1-p1 ; Align 537559 1 1491 utg18_pilon exonerate:protein2genome:local gene 534839 535807 1339 - . gene_id 0 ; sequence GL50803_16827-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 534839 535807 . - . utg18_pilon exonerate:protein2genome:local exon 534839 535807 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 534839 535807 1339 - . alignment_id 0 ; Query GL50803_16827-t26_1-p1 ; Align 535808 1 969 utg18_pilon exonerate:protein2genome:local gene 529446 530015 930 - . gene_id 0 ; sequence GL50803_16829-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 529446 530015 . - . utg18_pilon exonerate:protein2genome:local exon 529446 530015 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 529446 530015 930 - . alignment_id 0 ; Query GL50803_16829-t26_1-p1 ; Align 530016 1 570 utg18_pilon exonerate:protein2genome:local gene 520746 523580 4089 - . gene_id 0 ; sequence GL50803_16830-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 520746 523580 . - . utg18_pilon exonerate:protein2genome:local exon 520746 523580 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 520746 523580 4089 - . alignment_id 0 ; Query GL50803_16830-t26_1-p1 ; Align 523581 1 2835 utg64_pilon exonerate:protein2genome:local gene 456044 457858 2813 - . gene_id 0 ; sequence GL50803_16833-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 456044 457858 . - . utg64_pilon exonerate:protein2genome:local exon 456044 457858 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 456044 457858 2813 - . alignment_id 0 ; Query GL50803_16833-t26_1-p1 ; Align 457859 1 1815 utg64_pilon exonerate:protein2genome:local gene 453279 455483 3251 + . gene_id 0 ; sequence GL50803_16834-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 453279 455483 . + . utg64_pilon exonerate:protein2genome:local exon 453279 455483 . + . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 453279 455483 3251 + . alignment_id 0 ; Query GL50803_16834-t26_1-p1 ; Align 453279 1101 1461 ; Align 454740 1590 744 utg64_pilon exonerate:protein2genome:local gene 407037 408842 1647 - . gene_id 0 ; sequence GL50803_16835-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 408065 408842 . - . utg64_pilon exonerate:protein2genome:local exon 408065 408842 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 408063 408064 . - . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 407966 408064 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 407966 407967 . - . intron_id 0 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local cds 407037 407965 . - . utg64_pilon exonerate:protein2genome:local exon 407037 407965 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 407037 408842 1647 - . alignment_id 0 ; Query GL50803_16835-t26_1-p1 ; Align 408843 1 777 ; Align 407964 261 927 utg308_pilon exonerate:protein2genome:local gene 645287 647605 3403 - . gene_id 0 ; sequence GL50803_16839-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 645287 647605 . - . utg308_pilon exonerate:protein2genome:local exon 645287 647605 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 645287 647605 3403 - . alignment_id 0 ; Query GL50803_16839-t26_1-p1 ; Align 647606 6 2319 utg308_pilon exonerate:protein2genome:local gene 647813 652572 7451 + . gene_id 0 ; sequence GL50803_16840-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 647813 652572 . + . utg308_pilon exonerate:protein2genome:local exon 647813 652572 . + . insertions 3 ; deletions 2 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 647813 652572 7451 + . alignment_id 0 ; Query GL50803_16840-t26_1-p1 ; Align 647813 1 1209 ; Align 649024 405 504 ; Align 649528 574 1242 ; Align 650773 988 1800 utg308_pilon exonerate:protein2genome:local gene 654858 656576 2226 - . gene_id 0 ; sequence GL50803_16841-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 654858 656576 . - . utg308_pilon exonerate:protein2genome:local exon 654858 656576 . - . insertions 6 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 654858 656576 2226 - . alignment_id 0 ; Query GL50803_16841-t26_1-p1 ; Align 656577 1 1239 ; Align 655332 414 474 utg308_pilon exonerate:protein2genome:local gene 661234 663396 3073 - . gene_id 0 ; sequence GL50803_16842-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 661234 663396 . - . utg308_pilon exonerate:protein2genome:local exon 661234 663396 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 661234 663396 3073 - . alignment_id 0 ; Query GL50803_16842-t26_1-p1 ; Align 663397 1 1995 ; Align 661402 667 168 utg308_pilon exonerate:protein2genome:local gene 665127 675214 3608 - . gene_id 0 ; sequence GL50803_16843-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 675123 675214 . - . utg308_pilon exonerate:protein2genome:local exon 675123 675214 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 675121 675122 . - . intron_id 1 ; splice_site "GA" utg308_pilon exonerate:protein2genome:local intron 667684 675122 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 667684 667685 . - . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 665127 667683 . - . utg308_pilon exonerate:protein2genome:local exon 665127 667683 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 665127 675214 3608 - . alignment_id 0 ; Query GL50803_16843-t26_1-p1 ; Align 675215 370 90 ; Align 667683 401 2556 utg308_pilon exonerate:protein2genome:local gene 668959 669930 1488 + . gene_id 0 ; sequence GL50803_16844-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 668959 669930 . + . utg308_pilon exonerate:protein2genome:local exon 668959 669930 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 668959 669930 1488 + . alignment_id 0 ; Query GL50803_16844-t26_1-p1 ; Align 668959 1 972 utg349_pilon exonerate:protein2genome:local gene 75972 77780 2307 + . gene_id 0 ; sequence GL50803_16860-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 75972 77780 . + . utg349_pilon exonerate:protein2genome:local exon 75972 77780 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 75972 77780 2307 + . alignment_id 0 ; Query GL50803_16860-t26_1-p1 ; Align 75972 1 1809 utg349_pilon exonerate:protein2genome:local gene 70689 71561 823 + . gene_id 0 ; sequence GL50803_16861-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 70689 71561 . + . utg349_pilon exonerate:protein2genome:local exon 70689 71561 . + . insertions 0 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 70689 71561 823 + . alignment_id 0 ; Query GL50803_16861-t26_1-p1 ; Align 70689 1 423 ; Align 71112 145 279 ; Align 71391 240 171 utg349_pilon exonerate:protein2genome:local gene 68808 69789 1400 - . gene_id 0 ; sequence GL50803_16862-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 68808 69789 . - . utg349_pilon exonerate:protein2genome:local exon 68808 69789 . - . insertions 0 ; deletions 2 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 68808 69789 1400 - . alignment_id 0 ; Query GL50803_16862-t26_1-p1 ; Align 69790 1 90 ; Align 69699 32 411 ; Align 69288 170 480 utg349_pilon exonerate:protein2genome:local gene 48938 50964 2968 + . gene_id 0 ; sequence GL50803_16863-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 48938 50964 . + . utg349_pilon exonerate:protein2genome:local exon 48938 50964 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 48938 50964 2968 + . alignment_id 0 ; Query GL50803_16863-t26_1-p1 ; Align 48938 1 174 ; Align 49114 59 1851 utg308_pilon exonerate:protein2genome:local gene 868402 871011 4433 + . gene_id 0 ; sequence GL50803_16867-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 868402 871011 . + . utg308_pilon exonerate:protein2genome:local exon 868402 871011 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 868402 871011 4433 + . alignment_id 0 ; Query GL50803_16867-t26_1-p1 ; Align 868402 1 2610 utg308_pilon exonerate:protein2genome:local gene 838305 843485 6243 + . gene_id 0 ; sequence GL50803_16869-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 838305 839470 . + . utg308_pilon exonerate:protein2genome:local exon 838305 839470 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local splice5 839471 839472 . + . intron_id 1 ; splice_site "GG" utg308_pilon exonerate:protein2genome:local intron 839471 839500 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 839499 839500 . + . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 839501 843485 . + . utg308_pilon exonerate:protein2genome:local exon 839501 843485 . + . insertions 0 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 838305 843485 6243 + . alignment_id 0 ; Query GL50803_16869-t26_1-p1 ; Align 838305 1 849 ; Align 839154 285 315 ; Align 839502 391 138 ; Align 839640 439 84 ; Align 839724 468 3762 utg349_pilon exonerate:protein2genome:local gene 431212 432208 925 + . gene_id 0 ; sequence GL50803_16875-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 431212 432208 . + . utg349_pilon exonerate:protein2genome:local exon 431212 432208 . + . insertions 0 ; deletions 2 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 431212 432208 925 + . alignment_id 0 ; Query GL50803_16875-t26_1-p1 ; Align 431212 1 531 ; Align 431743 179 171 ; Align 431914 237 237 ; Align 432152 316 57 utg349_pilon exonerate:protein2genome:local gene 435326 436225 1441 - . gene_id 0 ; sequence GL50803_16876-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 435326 436225 . - . utg349_pilon exonerate:protein2genome:local exon 435326 436225 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 435326 436225 1441 - . alignment_id 0 ; Query GL50803_16876-t26_1-p1 ; Align 436226 1 900 utg349_pilon exonerate:protein2genome:local gene 434947 435330 641 + . gene_id 0 ; sequence GL50803_16877-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 434947 435330 . + . utg349_pilon exonerate:protein2genome:local exon 434947 435330 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 434947 435330 641 + . alignment_id 0 ; Query GL50803_16877-t26_1-p1 ; Align 434947 1 384 utg349_pilon exonerate:protein2genome:local gene 442711 444177 2108 + . gene_id 0 ; sequence GL50803_16879-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 442711 444177 . + . utg349_pilon exonerate:protein2genome:local exon 442711 444177 . + . insertions 3 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 442711 444177 2108 + . alignment_id 0 ; Query GL50803_16879-t26_1-p1 ; Align 442711 464 162 ; Align 442873 519 69 ; Align 442945 542 1233 utg349_pilon exonerate:protein2genome:local gene 455784 457370 2279 + . gene_id 0 ; sequence GL50803_16880-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 455784 457370 . + . utg349_pilon exonerate:protein2genome:local exon 455784 457370 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 455784 457370 2279 + . alignment_id 0 ; Query GL50803_16880-t26_1-p1 ; Align 455784 28 1587 utg349_pilon exonerate:protein2genome:local gene 479177 480610 2105 + . gene_id 0 ; sequence GL50803_16882-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 479177 480610 . + . utg349_pilon exonerate:protein2genome:local exon 479177 480610 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 479177 480610 2105 + . alignment_id 0 ; Query GL50803_16882-t26_1-p1 ; Align 479177 1 555 ; Align 479732 187 879 utg349_pilon exonerate:protein2genome:local gene 796386 797978 2580 - . gene_id 0 ; sequence GL50803_16887-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 796386 797978 . - . utg349_pilon exonerate:protein2genome:local exon 796386 797978 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 796386 797978 2580 - . alignment_id 0 ; Query GL50803_16887-t26_1-p1 ; Align 797979 1 1593 utg349_pilon exonerate:protein2genome:local gene 798116 801703 4445 + . gene_id 0 ; sequence GL50803_16888-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 798116 801703 . + . utg349_pilon exonerate:protein2genome:local exon 798116 801703 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 798116 801703 4445 + . alignment_id 0 ; Query GL50803_16888-t26_1-p1 ; Align 798116 1 2682 ; Align 800801 895 903 utg349_pilon exonerate:protein2genome:local gene 801789 803450 1646 + . gene_id 0 ; sequence GL50803_16889-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 801789 803450 . + . utg349_pilon exonerate:protein2genome:local exon 801789 803450 . + . insertions 0 ; deletions 7 utg349_pilon exonerate:protein2genome:local similarity 801789 803450 1646 + . alignment_id 0 ; Query GL50803_16889-t26_1-p1 ; Align 801789 1 267 ; Align 802056 92 156 ; Align 802212 148 531 ; Align 802743 326 708 utg349_pilon exonerate:protein2genome:local gene 811303 812067 1128 - . gene_id 0 ; sequence GL50803_16891-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 811303 812067 . - . utg349_pilon exonerate:protein2genome:local exon 811303 812067 . - . insertions 0 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 811303 812067 1128 - . alignment_id 0 ; Query GL50803_16891-t26_1-p1 ; Align 812068 1 444 ; Align 811624 154 78 ; Align 811546 181 243 utg349_pilon exonerate:protein2genome:local gene 850098 852881 3749 - . gene_id 0 ; sequence GL50803_16893-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 850098 852881 . - . utg349_pilon exonerate:protein2genome:local exon 850098 852881 . - . insertions 6 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 850098 852881 3749 - . alignment_id 0 ; Query GL50803_16893-t26_1-p1 ; Align 852882 1 1395 ; Align 851487 468 804 ; Align 850677 736 504 ; Align 850173 906 75 utg349_pilon exonerate:protein2genome:local gene 848519 850027 2492 - . gene_id 0 ; sequence GL50803_16894-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 848519 850027 . - . utg349_pilon exonerate:protein2genome:local exon 848519 850027 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 848519 850027 2492 - . alignment_id 0 ; Query GL50803_16894-t26_1-p1 ; Align 850028 1 1509 utg18_pilon exonerate:protein2genome:local gene 247566 249146 2713 + . gene_id 0 ; sequence GL50803_16900-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 247566 249146 . + . utg18_pilon exonerate:protein2genome:local exon 247566 249146 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 247566 249146 2713 + . alignment_id 0 ; Query GL50803_16900-t26_1-p1 ; Align 247566 5 1581 utg18_pilon exonerate:protein2genome:local gene 243791 246754 3703 + . gene_id 0 ; sequence GL50803_16902-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 243791 246754 . + . utg18_pilon exonerate:protein2genome:local exon 243791 246754 . + . insertions 6 ; deletions 8 utg18_pilon exonerate:protein2genome:local similarity 243791 246754 3703 + . alignment_id 0 ; Query GL50803_16902-t26_1-p1 ; Align 243791 1 372 ; Align 244169 125 1545 ; Align 245714 643 30 ; Align 245744 655 969 ; Align 246713 981 42 utg18_pilon exonerate:protein2genome:local gene 241426 243786 3280 + . gene_id 0 ; sequence GL50803_16903-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 241426 243786 . + . utg18_pilon exonerate:protein2genome:local exon 241426 243786 . + . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 241426 243786 3280 + . alignment_id 0 ; Query GL50803_16903-t26_1-p1 ; Align 241426 1 1695 ; Align 243121 568 666 utg18_pilon exonerate:protein2genome:local gene 222285 224105 2612 - . gene_id 0 ; sequence GL50803_16905-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 222285 224105 . - . utg18_pilon exonerate:protein2genome:local exon 222285 224105 . - . insertions 0 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 222285 224105 2612 - . alignment_id 0 ; Query GL50803_16905-t26_1-p1 ; Align 224106 1 1671 ; Align 222435 559 150 utg18_pilon exonerate:protein2genome:local gene 216105 217232 1523 + . gene_id 0 ; sequence GL50803_16906-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 216105 217232 . + . utg18_pilon exonerate:protein2genome:local exon 216105 217232 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 216105 217232 1523 + . alignment_id 0 ; Query GL50803_16906-t26_1-p1 ; Align 216105 1 1128 utg47_pilon exonerate:protein2genome:local gene 8246 9564 1562 + . gene_id 0 ; sequence GL50803_16910-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 8246 9564 . + . utg47_pilon exonerate:protein2genome:local exon 8246 9564 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 8246 9564 1562 + . alignment_id 0 ; Query GL50803_16910-t26_1-p1 ; Align 8246 1 162 ; Align 8410 56 528 ; Align 8938 233 627 utg47_pilon exonerate:protein2genome:local gene 19143 20147 1200 - . gene_id 0 ; sequence GL50803_16912-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 19143 20147 . - . utg47_pilon exonerate:protein2genome:local exon 19143 20147 . - . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 19143 20147 1200 - . alignment_id 0 ; Query GL50803_16912-t26_1-p1 ; Align 20148 1 732 ; Align 19416 248 6 ; Align 19410 251 267 utg47_pilon exonerate:protein2genome:local gene 44692 49185 5568 + . gene_id 0 ; sequence GL50803_16914-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 44692 49185 . + . utg47_pilon exonerate:protein2genome:local exon 44692 49185 . + . insertions 6 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 44692 49185 5568 + . alignment_id 0 ; Query GL50803_16914-t26_1-p1 ; Align 44692 1 645 ; Align 45340 216 2520 ; Align 47863 1056 888 ; Align 48751 1353 435 utg47_pilon exonerate:protein2genome:local gene 55537 57840 3571 + . gene_id 0 ; sequence GL50803_16915-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 55537 57840 . + . utg47_pilon exonerate:protein2genome:local exon 55537 57840 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 55537 57840 3571 + . alignment_id 0 ; Query GL50803_16915-t26_1-p1 ; Align 55537 1 2304 utg47_pilon exonerate:protein2genome:local gene 59571 64566 7757 + . gene_id 0 ; sequence GL50803_16916-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 59571 64566 . + . utg47_pilon exonerate:protein2genome:local exon 59571 64566 . + . insertions 15 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 59571 64566 7757 + . alignment_id 0 ; Query GL50803_16916-t26_1-p1 ; Align 59571 1 741 ; Align 60313 248 1323 ; Align 61642 689 2463 ; Align 64114 1510 366 ; Align 64480 1633 87 utg731_pilon exonerate:protein2genome:local gene 171305 172819 1473 - . gene_id 0 ; sequence GL50803_16920-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 171305 172819 . - . utg731_pilon exonerate:protein2genome:local exon 171305 172819 . - . insertions 0 ; deletions 8 utg731_pilon exonerate:protein2genome:local similarity 171305 172819 1473 - . alignment_id 0 ; Query GL50803_16920-t26_1-p1 ; Align 172820 220 246 ; Align 172574 303 192 ; Align 172382 370 717 ; Align 171665 610 105 ; Align 171560 648 255 utg731_pilon exonerate:protein2genome:local gene 175843 178773 4368 + . gene_id 0 ; sequence GL50803_16922-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 175843 178773 . + . utg731_pilon exonerate:protein2genome:local exon 175843 178773 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 175843 178773 4368 + . alignment_id 0 ; Query GL50803_16922-t26_1-p1 ; Align 175843 1 996 ; Align 176839 334 1935 utg731_pilon exonerate:protein2genome:local gene 181732 183813 2413 + . gene_id 0 ; sequence GL50803_16923-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 181732 183813 . + . utg731_pilon exonerate:protein2genome:local exon 181732 183813 . + . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 181732 183813 2413 + . alignment_id 0 ; Query GL50803_16923-t26_1-p1 ; Align 181732 1 1194 ; Align 182926 400 285 ; Align 183211 497 603 utg731_pilon exonerate:protein2genome:local gene 187672 188412 1215 + . gene_id 0 ; sequence GL50803_16924-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 187672 188412 . + . utg731_pilon exonerate:protein2genome:local exon 187672 188412 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 187672 188412 1215 + . alignment_id 0 ; Query GL50803_16924-t26_1-p1 ; Align 187672 1 741 utg731_pilon exonerate:protein2genome:local gene 201995 203878 2157 - . gene_id 0 ; sequence GL50803_16925-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 201995 203878 . - . utg731_pilon exonerate:protein2genome:local exon 201995 203878 . - . insertions 0 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 201995 203878 2157 - . alignment_id 0 ; Query GL50803_16925-t26_1-p1 ; Align 203879 1 534 ; Align 203345 180 708 ; Align 202637 418 24 ; Align 202613 427 618 utg64_pilon exonerate:protein2genome:local gene 672412 673923 2253 + . gene_id 0 ; sequence GL50803_16926-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 672412 673923 . + . utg64_pilon exonerate:protein2genome:local exon 672412 673923 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 672412 673923 2253 + . alignment_id 0 ; Query GL50803_16926-t26_1-p1 ; Align 672412 1 1512 utg64_pilon exonerate:protein2genome:local gene 681693 682835 1660 + . gene_id 0 ; sequence GL50803_16928-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 681693 682835 . + . utg64_pilon exonerate:protein2genome:local exon 681693 682835 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 681693 682835 1660 + . alignment_id 0 ; Query GL50803_16928-t26_1-p1 ; Align 681693 1 1143 utg64_pilon exonerate:protein2genome:local gene 684688 686256 2279 - . gene_id 0 ; sequence GL50803_16929-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 684688 686256 . - . utg64_pilon exonerate:protein2genome:local exon 684688 686256 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 684688 686256 2279 - . alignment_id 0 ; Query GL50803_16929-t26_1-p1 ; Align 686257 1 1569 utg64_pilon exonerate:protein2genome:local gene 558255 692056 2315 + . gene_id 0 ; sequence GL50803_16930-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 558255 558287 . + . utg64_pilon exonerate:protein2genome:local exon 558255 558287 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 558288 558289 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 558288 690052 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 690051 690052 . + . intron_id 0 ; splice_site "AA" utg64_pilon exonerate:protein2genome:local cds 690053 692056 . + . utg64_pilon exonerate:protein2genome:local exon 690053 692056 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 558255 692056 2315 + . alignment_id 0 ; Query GL50803_16930-t26_1-p1 ; Align 558255 8 33 ; Align 690053 19 2004 utg64_pilon exonerate:protein2genome:local gene 705155 706372 1727 - . gene_id 0 ; sequence GL50803_16931-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 705155 706372 . - . utg64_pilon exonerate:protein2genome:local exon 705155 706372 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 705155 706372 1727 - . alignment_id 0 ; Query GL50803_16931-t26_1-p1 ; Align 706373 1 480 ; Align 705893 162 738 utg731_pilon exonerate:protein2genome:local gene 936938 941047 6690 - . gene_id 0 ; sequence GL50803_16934-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 936938 941047 . - . utg731_pilon exonerate:protein2genome:local exon 936938 941047 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 936938 941047 6690 - . alignment_id 0 ; Query GL50803_16934-t26_1-p1 ; Align 941048 1 4110 utg731_pilon exonerate:protein2genome:local gene 944398 946032 2476 - . gene_id 0 ; sequence GL50803_16935-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 944398 946032 . - . utg731_pilon exonerate:protein2genome:local exon 944398 946032 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 944398 946032 2476 - . alignment_id 0 ; Query GL50803_16935-t26_1-p1 ; Align 946033 330 1635 utg731_pilon exonerate:protein2genome:local gene 953498 958042 6359 - . gene_id 0 ; sequence GL50803_16936-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 953498 958042 . - . utg731_pilon exonerate:protein2genome:local exon 953498 958042 . - . insertions 3 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 953498 958042 6359 - . alignment_id 0 ; Query GL50803_16936-t26_1-p1 ; Align 958043 1 177 ; Align 957866 61 369 ; Align 957494 184 489 ; Align 957005 348 3507 utg731_pilon exonerate:protein2genome:local gene 980076 981011 1353 + . gene_id 0 ; sequence GL50803_16940-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 980076 981011 . + . utg731_pilon exonerate:protein2genome:local exon 980076 981011 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 980076 981011 1353 + . alignment_id 0 ; Query GL50803_16940-t26_1-p1 ; Align 980076 1 555 ; Align 980634 186 378 utg731_pilon exonerate:protein2genome:local gene 992487 993182 515 - . gene_id 0 ; sequence GL50803_16942-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 992487 993182 . - . utg731_pilon exonerate:protein2genome:local exon 992487 993182 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 992487 993182 515 - . alignment_id 0 ; Query GL50803_16942-t26_1-p1 ; Align 993183 1 444 ; Align 992739 150 252 utg731_pilon exonerate:protein2genome:local gene 993302 996136 3832 - . gene_id 0 ; sequence GL50803_16943-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 993302 996136 . - . utg731_pilon exonerate:protein2genome:local exon 993302 996136 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 993302 996136 3832 - . alignment_id 0 ; Query GL50803_16943-t26_1-p1 ; Align 996137 1 1512 ; Align 994622 505 1320 utg731_pilon exonerate:protein2genome:local gene 855496 1000787 2696 + . gene_id 0 ; sequence GL50803_16944-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 855496 855586 . + . utg731_pilon exonerate:protein2genome:local exon 855496 855586 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local splice5 855587 855588 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 855587 998487 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 998486 998487 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 998488 1000787 . + . utg731_pilon exonerate:protein2genome:local exon 998488 1000787 . + . insertions 3 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 855496 1000787 2696 + . alignment_id 0 ; Query GL50803_16944-t26_1-p1 ; Align 855496 496 72 ; Align 855568 521 18 ; Align 998490 528 1593 ; Align 1000083 1062 375 ; Align 1000461 1187 327 utg731_pilon exonerate:protein2genome:local gene 1005518 1007662 3560 + . gene_id 0 ; sequence GL50803_16945-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1005518 1007662 . + . utg731_pilon exonerate:protein2genome:local exon 1005518 1007662 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1005518 1007662 3560 + . alignment_id 0 ; Query GL50803_16945-t26_1-p1 ; Align 1005518 1 1698 ; Align 1007219 567 444 utg47_pilon exonerate:protein2genome:local gene 1163946 1165448 2280 + . gene_id 0 ; sequence GL50803_16948-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1163946 1165448 . + . utg47_pilon exonerate:protein2genome:local exon 1163946 1165448 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1163946 1165448 2280 + . alignment_id 0 ; Query GL50803_16948-t26_1-p1 ; Align 1163946 2 1503 utg47_pilon exonerate:protein2genome:local gene 1155379 1156065 884 + . gene_id 0 ; sequence GL50803_16949-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1155379 1156065 . + . utg47_pilon exonerate:protein2genome:local exon 1155379 1156065 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1155379 1156065 884 + . alignment_id 0 ; Query GL50803_16949-t26_1-p1 ; Align 1155379 1 687 utg99_pilon exonerate:protein2genome:local gene 544826 545473 1072 - . gene_id 0 ; sequence GL50803_1695-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 544826 545473 . - . utg99_pilon exonerate:protein2genome:local exon 544826 545473 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 544826 545473 1072 - . alignment_id 0 ; Query GL50803_1695-t26_1-p1 ; Align 545474 1 648 utg47_pilon exonerate:protein2genome:local gene 1149180 1150382 1169 - . gene_id 0 ; sequence GL50803_16950-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1149180 1150382 . - . utg47_pilon exonerate:protein2genome:local exon 1149180 1150382 . - . insertions 15 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1149180 1150382 1169 - . alignment_id 0 ; Query GL50803_16950-t26_1-p1 ; Align 1150383 1 942 ; Align 1149438 315 57 ; Align 1149378 334 78 ; Align 1149297 360 30 ; Align 1149261 370 81 utg47_pilon exonerate:protein2genome:local gene 1131210 1135607 5657 + . gene_id 0 ; sequence GL50803_16951-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1131210 1134523 . + . utg47_pilon exonerate:protein2genome:local exon 1131210 1134523 . + . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local splice5 1134524 1134525 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1134524 1134568 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1134567 1134568 . + . intron_id 0 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 1134569 1135607 . + . utg47_pilon exonerate:protein2genome:local exon 1134569 1135607 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1131210 1135607 5657 + . alignment_id 0 ; Query GL50803_16951-t26_1-p1 ; Align 1131210 1 1743 ; Align 1132953 586 1032 ; Align 1133985 931 537 ; Align 1134570 1111 1038 utg47_pilon exonerate:protein2genome:local gene 1115848 1116735 1311 + . gene_id 0 ; sequence GL50803_16952-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1115848 1116735 . + . utg47_pilon exonerate:protein2genome:local exon 1115848 1116735 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1115848 1116735 1311 + . alignment_id 0 ; Query GL50803_16952-t26_1-p1 ; Align 1115848 1 888 utg47_pilon exonerate:protein2genome:local gene 1114195 1115277 1664 + . gene_id 0 ; sequence GL50803_16953-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1114195 1115277 . + . utg47_pilon exonerate:protein2genome:local exon 1114195 1115277 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1114195 1115277 1664 + . alignment_id 0 ; Query GL50803_16953-t26_1-p1 ; Align 1114195 1 1083 utg47_pilon exonerate:protein2genome:local gene 1103497 1106922 4917 + . gene_id 0 ; sequence GL50803_16954-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1103497 1106922 . + . utg47_pilon exonerate:protein2genome:local exon 1103497 1106922 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1103497 1106922 4917 + . alignment_id 0 ; Query GL50803_16954-t26_1-p1 ; Align 1103497 1 3426 utg731_pilon exonerate:protein2genome:local gene 1242094 1244349 3075 - . gene_id 0 ; sequence GL50803_16956-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1242094 1244349 . - . utg731_pilon exonerate:protein2genome:local exon 1242094 1244349 . - . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1242094 1244349 3075 - . alignment_id 0 ; Query GL50803_16956-t26_1-p1 ; Align 1244350 1 366 ; Align 1243984 126 1890 utg731_pilon exonerate:protein2genome:local gene 1244380 1245465 1495 - . gene_id 0 ; sequence GL50803_16957-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1244380 1245465 . - . utg731_pilon exonerate:protein2genome:local exon 1244380 1245465 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1244380 1245465 1495 - . alignment_id 0 ; Query GL50803_16957-t26_1-p1 ; Align 1245466 1 1086 utg731_pilon exonerate:protein2genome:local gene 1250196 1254035 5422 - . gene_id 0 ; sequence GL50803_16958-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1250196 1254035 . - . utg731_pilon exonerate:protein2genome:local exon 1250196 1254035 . - . insertions 3 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1250196 1254035 5422 - . alignment_id 0 ; Query GL50803_16958-t26_1-p1 ; Align 1254036 4 681 ; Align 1253355 232 507 ; Align 1252845 401 975 ; Align 1251870 727 1674 utg731_pilon exonerate:protein2genome:local gene 1286500 1294680 11537 - . gene_id 0 ; sequence GL50803_16963-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1286500 1294680 . - . utg731_pilon exonerate:protein2genome:local exon 1286500 1294680 . - . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1286500 1294680 11537 - . alignment_id 0 ; Query GL50803_16963-t26_1-p1 ; Align 1294681 1 2787 ; Align 1291894 933 5394 utg349_pilon exonerate:protein2genome:local gene 1157002 1165443 9929 - . gene_id 0 ; sequence GL50803_16966-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1157002 1165443 . - . utg349_pilon exonerate:protein2genome:local exon 1157002 1165443 . - . insertions 18 ; deletions 11 utg349_pilon exonerate:protein2genome:local similarity 1157002 1165443 9929 - . alignment_id 0 ; Query GL50803_16966-t26_1-p1 ; Align 1165444 1743 90 ; Align 1165345 1773 1356 ; Align 1163989 2226 129 ; Align 1163860 2273 795 ; Align 1163065 2539 2943 ; Align 1160119 3520 69 ; Align 1160050 3544 138 ; Align 1159912 3592 624 ; Align 1159288 3801 408 ; Align 1158880 3938 609 ; Align 1158268 4141 171 ; Align 1158094 4198 1092 utg349_pilon exonerate:protein2genome:local gene 1170636 1174889 6672 - . gene_id 0 ; sequence GL50803_16967-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1170636 1174889 . - . utg349_pilon exonerate:protein2genome:local exon 1170636 1174889 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1170636 1174889 6672 - . alignment_id 0 ; Query GL50803_16967-t26_1-p1 ; Align 1174890 1 2640 ; Align 1172250 882 1614 utg349_pilon exonerate:protein2genome:local gene 1192922 1193419 790 + . gene_id 0 ; sequence GL50803_16969-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1192922 1193419 . + . utg349_pilon exonerate:protein2genome:local exon 1192922 1193419 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1192922 1193419 790 + . alignment_id 0 ; Query GL50803_16969-t26_1-p1 ; Align 1192922 1 498 utg349_pilon exonerate:protein2genome:local gene 1203295 1204008 1172 + . gene_id 0 ; sequence GL50803_16970-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1203295 1204008 . + . utg349_pilon exonerate:protein2genome:local exon 1203295 1204008 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1203295 1204008 1172 + . alignment_id 0 ; Query GL50803_16970-t26_1-p1 ; Align 1203295 1 714 utg349_pilon exonerate:protein2genome:local gene 1193879 1194592 1172 - . gene_id 0 ; sequence GL50803_16970-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1193879 1194592 . - . utg349_pilon exonerate:protein2genome:local exon 1193879 1194592 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1193879 1194592 1172 - . alignment_id 0 ; Query GL50803_16970-t26_1-p1 ; Align 1194593 1 714 utg99_pilon exonerate:protein2genome:local gene 482185 483744 2446 - . gene_id 0 ; sequence GL50803_16973-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 482185 483744 . - . utg99_pilon exonerate:protein2genome:local exon 482185 483744 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 482185 483744 2446 - . alignment_id 0 ; Query GL50803_16973-t26_1-p1 ; Align 483745 1 1560 utg99_pilon exonerate:protein2genome:local gene 534109 538584 7157 - . gene_id 0 ; sequence GL50803_16975-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 534109 538584 . - . utg99_pilon exonerate:protein2genome:local exon 534109 538584 . - . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 534109 538584 7157 - . alignment_id 0 ; Query GL50803_16975-t26_1-p1 ; Align 538585 1 873 ; Align 537709 292 3600 utg99_pilon exonerate:protein2genome:local gene 527742 529388 1759 + . gene_id 0 ; sequence GL50803_16978-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 527742 529388 . + . utg99_pilon exonerate:protein2genome:local exon 527742 529388 . + . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 527742 529388 1759 + . alignment_id 0 ; Query GL50803_16978-t26_1-p1 ; Align 527742 1 525 ; Align 528270 176 1119 utg99_pilon exonerate:protein2genome:local gene 519504 520328 1227 + . gene_id 0 ; sequence GL50803_16979-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 519504 520328 . + . utg99_pilon exonerate:protein2genome:local exon 519504 520328 . + . insertions 0 ; deletions 0 ; frameshifts 3 utg99_pilon exonerate:protein2genome:local similarity 519504 520328 1227 + . alignment_id 0 ; Query GL50803_16979-t26_1-p1 ; Align 519504 1 270 ; Align 519776 91 483 ; Align 520260 252 69 utg99_pilon exonerate:protein2genome:local gene 508089 512030 4275 - . gene_id 0 ; sequence GL50803_16980-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 511929 512030 . - . utg99_pilon exonerate:protein2genome:local exon 511929 512030 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 511927 511928 . - . intron_id 1 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 511713 511928 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 511713 511714 . - . intron_id 0 ; splice_site "AA" utg99_pilon exonerate:protein2genome:local cds 508089 511712 . - . utg99_pilon exonerate:protein2genome:local exon 508089 511712 . - . insertions 0 ; deletions 11 utg99_pilon exonerate:protein2genome:local similarity 508089 512030 4275 - . alignment_id 0 ; Query GL50803_16980-t26_1-p1 ; Align 512031 1797 102 ; Align 511713 1831 177 ; Align 511536 1895 33 ; Align 511503 1908 222 ; Align 511281 1983 279 ; Align 511002 2078 405 ; Align 510597 2214 2508 utg99_pilon exonerate:protein2genome:local gene 498242 499819 2121 - . gene_id 0 ; sequence GL50803_16981-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 498242 499819 . - . utg99_pilon exonerate:protein2genome:local exon 498242 499819 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 498242 499819 2121 - . alignment_id 0 ; Query GL50803_16981-t26_1-p1 ; Align 499820 1 1578 utg731_pilon exonerate:protein2genome:local gene 42247 45534 4530 + . gene_id 0 ; sequence GL50803_16985-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 42247 45534 . + . utg731_pilon exonerate:protein2genome:local exon 42247 45534 . + . insertions 12 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 42247 45534 4530 + . alignment_id 0 ; Query GL50803_16985-t26_1-p1 ; Align 42247 1 969 ; Align 43219 324 900 ; Align 44119 626 114 ; Align 44236 664 408 ; Align 44647 800 36 ; Align 44683 813 648 ; Align 45334 1029 201 utg731_pilon exonerate:protein2genome:local gene 83616 85577 2867 - . gene_id 0 ; sequence GL50803_16986-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 83616 85577 . - . utg731_pilon exonerate:protein2genome:local exon 83616 85577 . - . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 83616 85577 2867 - . alignment_id 0 ; Query GL50803_16986-t26_1-p1 ; Align 85578 1 633 ; Align 84939 212 1323 utg265_pilon exonerate:protein2genome:local gene 852605 872536 720 - . gene_id 0 ; sequence GL50803_16988-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 871737 872536 . - . utg265_pilon exonerate:protein2genome:local exon 871737 872536 . - . insertions 15 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 871735 871736 . - . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 852636 871736 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 852636 852637 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 852605 852635 . - . utg265_pilon exonerate:protein2genome:local exon 852605 852635 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 852605 872536 720 - . alignment_id 0 ; Query GL50803_16988-t26_1-p1 ; Align 872537 1 354 ; Align 872168 119 429 ; Align 852635 263 30 utg47_pilon exonerate:protein2genome:local gene 1730099 1733140 3591 - . gene_id 0 ; sequence GL50803_16992-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1730099 1733140 . - . utg47_pilon exonerate:protein2genome:local exon 1730099 1733140 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1730099 1733140 3591 - . alignment_id 0 ; Query GL50803_16992-t26_1-p1 ; Align 1733141 3 1080 ; Align 1732061 364 1962 utg47_pilon exonerate:protein2genome:local gene 1720699 1723938 4975 + . gene_id 0 ; sequence GL50803_16993-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1720699 1723938 . + . utg47_pilon exonerate:protein2genome:local exon 1720699 1723938 . + . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 1720699 1723938 4975 + . alignment_id 0 ; Query GL50803_16993-t26_1-p1 ; Align 1720699 1 2331 ; Align 1723030 779 165 ; Align 1723195 837 744 utg47_pilon exonerate:protein2genome:local gene 1713830 1715060 1804 - . gene_id 0 ; sequence GL50803_16996-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1713830 1715060 . - . utg47_pilon exonerate:protein2genome:local exon 1713830 1715060 . - . insertions 0 ; deletions 2 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1713830 1715060 1804 - . alignment_id 0 ; Query GL50803_16996-t26_1-p1 ; Align 1715061 1 162 ; Align 1714898 55 405 ; Align 1714493 192 663 utg11_pilon exonerate:protein2genome:local gene 529111 530934 2961 - . gene_id 0 ; sequence GL50803_16998-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 529111 530934 . - . utg11_pilon exonerate:protein2genome:local exon 529111 530934 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 529111 530934 2961 - . alignment_id 0 ; Query GL50803_16998-t26_1-p1 ; Align 530935 1 1824 utg11_pilon exonerate:protein2genome:local gene 525735 527882 2958 - . gene_id 0 ; sequence GL50803_16999-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 525735 527882 . - . utg11_pilon exonerate:protein2genome:local exon 525735 527882 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 525735 527882 2958 - . alignment_id 0 ; Query GL50803_16999-t26_1-p1 ; Align 527883 384 462 ; Align 527421 539 33 ; Align 527388 551 1653 utg11_pilon exonerate:protein2genome:local gene 524744 525316 963 + . gene_id 0 ; sequence GL50803_17000-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 524744 525316 . + . utg11_pilon exonerate:protein2genome:local exon 524744 525316 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 524744 525316 963 + . alignment_id 0 ; Query GL50803_17000-t26_1-p1 ; Align 524744 1 573 utg11_pilon exonerate:protein2genome:local gene 517544 518597 1383 + . gene_id 0 ; sequence GL50803_17003-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 517544 518597 . + . utg11_pilon exonerate:protein2genome:local exon 517544 518597 . + . insertions 3 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 517544 518597 1383 + . alignment_id 0 ; Query GL50803_17003-t26_1-p1 ; Align 517544 3 846 ; Align 518391 285 39 ; Align 518433 298 165 utg11_pilon exonerate:protein2genome:local gene 510729 513299 3296 + . gene_id 0 ; sequence GL50803_17005-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 510729 511644 . + . utg11_pilon exonerate:protein2genome:local exon 510729 511644 . + . insertions 0 ; deletions 9 utg11_pilon exonerate:protein2genome:local splice5 511645 511646 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 511645 511680 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 511679 511680 . + . intron_id 0 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local cds 511681 513299 . + . utg11_pilon exonerate:protein2genome:local exon 511681 513299 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 510729 513299 3296 + . alignment_id 0 ; Query GL50803_17005-t26_1-p1 ; Align 510729 1 450 ; Align 511179 154 87 ; Align 511266 184 48 ; Align 511314 202 147 ; Align 511461 253 81 ; Align 511542 281 102 ; Align 511683 316 1617 utg11_pilon exonerate:protein2genome:local gene 499745 503954 5460 + . gene_id 0 ; sequence GL50803_17006-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 499745 503954 . + . utg11_pilon exonerate:protein2genome:local exon 499745 503954 . + . insertions 0 ; deletions 3 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 499745 503954 5460 + . alignment_id 0 ; Query GL50803_17006-t26_1-p1 ; Align 499745 1 63 ; Align 499809 22 423 ; Align 500232 166 3723 utg11_pilon exonerate:protein2genome:local gene 427898 431020 3583 - . gene_id 0 ; sequence GL50803_17008-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 427898 431020 . - . utg11_pilon exonerate:protein2genome:local exon 427898 431020 . - . insertions 0 ; deletions 9 utg11_pilon exonerate:protein2genome:local similarity 427898 431020 3583 - . alignment_id 0 ; Query GL50803_17008-t26_1-p1 ; Align 431021 416 153 ; Align 430868 468 87 ; Align 430781 501 222 ; Align 430559 576 834 ; Align 429725 855 324 ; Align 429401 964 1293 ; Align 428108 1396 210 utg212_pilon exonerate:protein2genome:local gene 66056 68536 3699 - . gene_id 0 ; sequence GL50803_17011-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 66056 68536 . - . utg212_pilon exonerate:protein2genome:local exon 66056 68536 . - . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 66056 68536 3699 - . alignment_id 0 ; Query GL50803_17011-t26_1-p1 ; Align 68537 1 1677 ; Align 66857 560 801 utg212_pilon exonerate:protein2genome:local gene 70934 72170 1687 + . gene_id 0 ; sequence GL50803_17012-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 70934 72170 . + . utg212_pilon exonerate:protein2genome:local exon 70934 72170 . + . insertions 0 ; deletions 4 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 70934 72170 1687 + . alignment_id 0 ; Query GL50803_17012-t26_1-p1 ; Align 70934 1 624 ; Align 71559 210 516 ; Align 72075 385 96 utg212_pilon exonerate:protein2genome:local gene 76634 77227 853 - . gene_id 0 ; sequence GL50803_17013-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 76634 77227 . - . utg212_pilon exonerate:protein2genome:local exon 76634 77227 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 76634 77227 853 - . alignment_id 0 ; Query GL50803_17013-t26_1-p1 ; Align 77228 11 594 utg212_pilon exonerate:protein2genome:local gene 86599 88434 2967 + . gene_id 0 ; sequence GL50803_17014-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 86599 88434 . + . utg212_pilon exonerate:protein2genome:local exon 86599 88434 . + . insertions 0 ; deletions 2 utg212_pilon exonerate:protein2genome:local similarity 86599 88434 2967 + . alignment_id 0 ; Query GL50803_17014-t26_1-p1 ; Align 86599 1 555 ; Align 87154 187 669 ; Align 87823 411 612 utg212_pilon exonerate:protein2genome:local gene 89995 91191 1560 + . gene_id 0 ; sequence GL50803_17015-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 89995 91191 . + . utg212_pilon exonerate:protein2genome:local exon 89995 91191 . + . insertions 0 ; deletions 0 ; frameshifts 6 utg212_pilon exonerate:protein2genome:local similarity 89995 91191 1560 + . alignment_id 0 ; Query GL50803_17015-t26_1-p1 ; Align 89995 1 861 ; Align 90861 288 54 ; Align 90916 306 276 utg99_pilon exonerate:protein2genome:local gene 62136 63578 1554 - . gene_id 0 ; sequence GL50803_17023-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 62136 63578 . - . utg99_pilon exonerate:protein2genome:local exon 62136 63578 . - . insertions 0 ; deletions 6 utg99_pilon exonerate:protein2genome:local similarity 62136 63578 1554 - . alignment_id 0 ; Query GL50803_17023-t26_1-p1 ; Align 63579 301 669 ; Align 62910 527 711 ; Align 62199 767 63 utg99_pilon exonerate:protein2genome:local gene 71035 73029 3035 - . gene_id 0 ; sequence GL50803_17025-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 71035 73029 . - . utg99_pilon exonerate:protein2genome:local exon 71035 73029 . - . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 71035 73029 3035 - . alignment_id 0 ; Query GL50803_17025-t26_1-p1 ; Align 73030 1 1113 ; Align 71914 372 879 utg349_pilon exonerate:protein2genome:local gene 263227 263895 998 + . gene_id 0 ; sequence GL50803_17030-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 263227 263895 . + . utg349_pilon exonerate:protein2genome:local exon 263227 263895 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 263227 263895 998 + . alignment_id 0 ; Query GL50803_17030-t26_1-p1 ; Align 263227 1 669 utg349_pilon exonerate:protein2genome:local gene 295379 296605 1730 - . gene_id 0 ; sequence GL50803_17036-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 295379 296605 . - . utg349_pilon exonerate:protein2genome:local exon 295379 296605 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 295379 296605 1730 - . alignment_id 0 ; Query GL50803_17036-t26_1-p1 ; Align 296606 1 1227 utg349_pilon exonerate:protein2genome:local gene 296874 297626 889 + . gene_id 0 ; sequence GL50803_17037-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 296874 297626 . + . utg349_pilon exonerate:protein2genome:local exon 296874 297626 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 296874 297626 889 + . alignment_id 0 ; Query GL50803_17037-t26_1-p1 ; Align 296874 1 753 utg47_pilon exonerate:protein2genome:local gene 2283560 2286493 3535 - . gene_id 0 ; sequence GL50803_17042-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2283560 2286493 . - . utg47_pilon exonerate:protein2genome:local exon 2283560 2286493 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2283560 2286493 3535 - . alignment_id 0 ; Query GL50803_17042-t26_1-p1 ; Align 2286494 1 2934 utg47_pilon exonerate:protein2genome:local gene 2287774 2288994 2082 + . gene_id 0 ; sequence GL50803_17043-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2287774 2288994 . + . utg47_pilon exonerate:protein2genome:local exon 2287774 2288994 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2287774 2288994 2082 + . alignment_id 0 ; Query GL50803_17043-t26_1-p1 ; Align 2287774 1 1221 utg47_pilon exonerate:protein2genome:local gene 2289013 2289705 1008 - . gene_id 0 ; sequence GL50803_17044-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2289013 2289705 . - . utg47_pilon exonerate:protein2genome:local exon 2289013 2289705 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2289013 2289705 1008 - . alignment_id 0 ; Query GL50803_17044-t26_1-p1 ; Align 2289706 1 693 utg47_pilon exonerate:protein2genome:local gene 2291565 2292669 1384 - . gene_id 0 ; sequence GL50803_17045-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2291565 2292669 . - . utg47_pilon exonerate:protein2genome:local exon 2291565 2292669 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 2291565 2292669 1384 - . alignment_id 0 ; Query GL50803_17045-t26_1-p1 ; Align 2292670 1 93 ; Align 2292576 32 1011 utg47_pilon exonerate:protein2genome:local gene 2292589 2294628 3150 + . gene_id 0 ; sequence GL50803_17046-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2292589 2294628 . + . utg47_pilon exonerate:protein2genome:local exon 2292589 2294628 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2292589 2294628 3150 + . alignment_id 0 ; Query GL50803_17046-t26_1-p1 ; Align 2292589 1 2040 utg99_pilon exonerate:protein2genome:local gene 220040 221371 1688 - . gene_id 0 ; sequence GL50803_17051-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 220040 221371 . - . utg99_pilon exonerate:protein2genome:local exon 220040 221371 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 220040 221371 1688 - . alignment_id 0 ; Query GL50803_17051-t26_1-p1 ; Align 221372 1 1332 utg99_pilon exonerate:protein2genome:local gene 64971 208264 3649 - . gene_id 0 ; sequence GL50803_17053-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 205891 208264 . - . utg99_pilon exonerate:protein2genome:local exon 205891 208264 . - . insertions 6 ; deletions 2 utg99_pilon exonerate:protein2genome:local splice5 205889 205890 . - . intron_id 1 ; splice_site "CT" utg99_pilon exonerate:protein2genome:local intron 69290 205890 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 69290 69291 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 69116 69289 . - . utg99_pilon exonerate:protein2genome:local exon 69116 69289 . - . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local splice5 69114 69115 . - . intron_id 2 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 65480 69115 . - . intron_id 2 utg99_pilon exonerate:protein2genome:local splice3 65480 65481 . - . intron_id 1 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 64971 65479 . - . utg99_pilon exonerate:protein2genome:local exon 64971 65479 . - . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 64971 208264 3649 - . alignment_id 0 ; Query GL50803_17053-t26_1-p1 ; Align 208265 1 1248 ; Align 207017 418 6 ; Align 207011 421 105 ; Align 206900 456 1008 ; Align 69288 793 81 ; Align 69207 821 90 ; Align 65478 852 282 ; Align 65196 947 225 utg99_pilon exonerate:protein2genome:local gene 204096 205073 1547 + . gene_id 0 ; sequence GL50803_17054-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 204096 205073 . + . utg99_pilon exonerate:protein2genome:local exon 204096 205073 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 204096 205073 1547 + . alignment_id 0 ; Query GL50803_17054-t26_1-p1 ; Align 204096 1 978 utg99_pilon exonerate:protein2genome:local gene 202100 203755 2113 - . gene_id 0 ; sequence GL50803_17055-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 202100 203755 . - . utg99_pilon exonerate:protein2genome:local exon 202100 203755 . - . insertions 0 ; deletions 2 utg99_pilon exonerate:protein2genome:local similarity 202100 203755 2113 - . alignment_id 0 ; Query GL50803_17055-t26_1-p1 ; Align 203756 1 1458 ; Align 202298 489 198 utg99_pilon exonerate:protein2genome:local gene 201423 201977 902 - . gene_id 0 ; sequence GL50803_17056-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 201423 201977 . - . utg99_pilon exonerate:protein2genome:local exon 201423 201977 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 201423 201977 902 - . alignment_id 0 ; Query GL50803_17056-t26_1-p1 ; Align 201978 1 555 utg99_pilon exonerate:protein2genome:local gene 197353 198537 1575 - . gene_id 0 ; sequence GL50803_17058-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 197353 198537 . - . utg99_pilon exonerate:protein2genome:local exon 197353 198537 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 197353 198537 1575 - . alignment_id 0 ; Query GL50803_17058-t26_1-p1 ; Align 198538 1 1185 utg99_pilon exonerate:protein2genome:local gene 478110 479978 3038 + . gene_id 0 ; sequence GL50803_17060-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 478110 479978 . + . utg99_pilon exonerate:protein2genome:local exon 478110 479978 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 478110 479978 3038 + . alignment_id 0 ; Query GL50803_17060-t26_1-p1 ; Align 478110 1 1869 utg99_pilon exonerate:protein2genome:local gene 453846 454673 1324 + . gene_id 0 ; sequence GL50803_17062-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 453846 454673 . + . utg99_pilon exonerate:protein2genome:local exon 453846 454673 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 453846 454673 1324 + . alignment_id 0 ; Query GL50803_17062-t26_1-p1 ; Align 453846 1 828 utg99_pilon exonerate:protein2genome:local gene 448292 451882 5999 - . gene_id 0 ; sequence GL50803_17063-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 448292 451882 . - . utg99_pilon exonerate:protein2genome:local exon 448292 451882 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 448292 451882 5999 - . alignment_id 0 ; Query GL50803_17063-t26_1-p1 ; Align 451883 1 3591 utg99_pilon exonerate:protein2genome:local gene 447217 448269 1524 + . gene_id 0 ; sequence GL50803_17064-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 447217 448269 . + . utg99_pilon exonerate:protein2genome:local exon 447217 448269 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 447217 448269 1524 + . alignment_id 0 ; Query GL50803_17064-t26_1-p1 ; Align 447217 13 1053 utg99_pilon exonerate:protein2genome:local gene 444035 447073 3674 - . gene_id 0 ; sequence GL50803_17065-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 444695 447073 . - . utg99_pilon exonerate:protein2genome:local exon 444695 447073 . - . insertions 9 ; deletions 2 utg99_pilon exonerate:protein2genome:local splice5 444693 444694 . - . intron_id 1 ; splice_site "TT" utg99_pilon exonerate:protein2genome:local intron 444599 444694 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 444599 444600 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 444035 444598 . - . utg99_pilon exonerate:protein2genome:local exon 444035 444598 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 444035 447073 3674 - . alignment_id 0 ; Query GL50803_17065-t26_1-p1 ; Align 447074 1 1122 ; Align 445952 376 1008 ; Align 444935 712 189 ; Align 444746 776 51 ; Align 444599 793 564 utg47_pilon exonerate:protein2genome:local gene 1825244 1826371 1804 - . gene_id 0 ; sequence GL50803_17068-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1825244 1826371 . - . utg47_pilon exonerate:protein2genome:local exon 1825244 1826371 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1825244 1826371 1804 - . alignment_id 0 ; Query GL50803_17068-t26_1-p1 ; Align 1826372 3 99 ; Align 1826270 36 1026 utg47_pilon exonerate:protein2genome:local gene 1823498 1825057 2453 - . gene_id 0 ; sequence GL50803_17069-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1823498 1825057 . - . utg47_pilon exonerate:protein2genome:local exon 1823498 1825057 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1823498 1825057 2453 - . alignment_id 0 ; Query GL50803_17069-t26_1-p1 ; Align 1825058 1 1098 ; Align 1823960 369 141 ; Align 1823819 417 321 utg11_pilon exonerate:protein2genome:local gene 770438 772846 3084 - . gene_id 0 ; sequence GL50803_17073-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 770438 772846 . - . utg11_pilon exonerate:protein2genome:local exon 770438 772846 . - . insertions 12 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 770438 772846 3084 - . alignment_id 0 ; Query GL50803_17073-t26_1-p1 ; Align 772847 1 780 ; Align 772064 261 144 ; Align 771911 309 1473 utg11_pilon exonerate:protein2genome:local gene 761907 763757 2140 - . gene_id 0 ; sequence GL50803_17074-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 761907 763757 . - . utg11_pilon exonerate:protein2genome:local exon 761907 763757 . - . insertions 0 ; deletions 6 ; frameshifts 3 utg11_pilon exonerate:protein2genome:local similarity 761907 763757 2140 - . alignment_id 0 ; Query GL50803_17074-t26_1-p1 ; Align 763758 252 822 ; Align 762936 530 30 ; Align 762905 540 441 ; Align 762462 688 270 ; Align 762192 779 285 utg11_pilon exonerate:protein2genome:local gene 757084 758829 1730 - . gene_id 0 ; sequence GL50803_17075-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 757573 758829 . - . utg11_pilon exonerate:protein2genome:local exon 757573 758829 . - . insertions 6 ; deletions 2 utg11_pilon exonerate:protein2genome:local splice5 757571 757572 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 757543 757572 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 757543 757544 . - . intron_id 0 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local cds 757084 757542 . - . utg11_pilon exonerate:protein2genome:local exon 757084 757542 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 757084 758829 1730 - . alignment_id 0 ; Query GL50803_17075-t26_1-p1 ; Align 758830 198 660 ; Align 758164 418 366 ; Align 757798 542 225 ; Align 757543 617 459 utg349_pilon exonerate:protein2genome:local gene 1500447 1501718 1936 + . gene_id 0 ; sequence GL50803_17079-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1500447 1501718 . + . utg349_pilon exonerate:protein2genome:local exon 1500447 1501718 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1500447 1501718 1936 + . alignment_id 0 ; Query GL50803_17079-t26_1-p1 ; Align 1500447 1 1272 utg349_pilon exonerate:protein2genome:local gene 1490788 1591533 10917 + . gene_id 0 ; sequence GL50803_17080-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1490788 1498686 . + . utg349_pilon exonerate:protein2genome:local exon 1490788 1498686 . + . insertions 30 ; deletions 4 utg349_pilon exonerate:protein2genome:local splice5 1498687 1498688 . + . intron_id 1 ; splice_site "TT" utg349_pilon exonerate:protein2genome:local intron 1498687 1591467 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1591466 1591467 . + . intron_id 0 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local cds 1591468 1591533 . + . utg349_pilon exonerate:protein2genome:local exon 1591468 1591533 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1490788 1591533 10917 + . alignment_id 0 ; Query GL50803_17080-t26_1-p1 ; Align 1490788 1 1311 ; Align 1492111 438 447 ; Align 1492570 587 507 ; Align 1493083 756 2568 ; Align 1495651 1613 651 ; Align 1496302 1832 1197 ; Align 1497499 2232 1188 ; Align 1591468 2628 66 utg349_pilon exonerate:protein2genome:local gene 1489326 1490744 2097 - . gene_id 0 ; sequence GL50803_17081-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1489326 1490744 . - . utg349_pilon exonerate:protein2genome:local exon 1489326 1490744 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 1489326 1490744 2097 - . alignment_id 0 ; Query GL50803_17081-t26_1-p1 ; Align 1490745 35 774 ; Align 1489971 295 18 ; Align 1489953 302 627 utg349_pilon exonerate:protein2genome:local gene 1483280 1486666 4664 - . gene_id 0 ; sequence GL50803_17082-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1483280 1486666 . - . utg349_pilon exonerate:protein2genome:local exon 1483280 1486666 . - . insertions 9 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1483280 1486666 4664 - . alignment_id 0 ; Query GL50803_17082-t26_1-p1 ; Align 1486667 5 2064 ; Align 1484594 693 1314 utg349_pilon exonerate:protein2genome:local gene 1481537 1483186 2304 + . gene_id 0 ; sequence GL50803_17083-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1481537 1483186 . + . utg349_pilon exonerate:protein2genome:local exon 1481537 1483186 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1481537 1483186 2304 + . alignment_id 0 ; Query GL50803_17083-t26_1-p1 ; Align 1481537 1 1650 utg349_pilon exonerate:protein2genome:local gene 1467155 1471539 6565 + . gene_id 0 ; sequence GL50803_17084-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1467155 1471539 . + . utg349_pilon exonerate:protein2genome:local exon 1467155 1471539 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 1467155 1471539 6565 + . alignment_id 0 ; Query GL50803_17084-t26_1-p1 ; Align 1467155 1 3081 ; Align 1470238 1029 1302 utg731_pilon exonerate:protein2genome:local gene 276646 278157 2023 + . gene_id 0 ; sequence GL50803_17089-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 276646 278157 . + . utg731_pilon exonerate:protein2genome:local exon 276646 278157 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 276646 278157 2023 + . alignment_id 0 ; Query GL50803_17089-t26_1-p1 ; Align 276646 2 21 ; Align 276667 10 1491 utg731_pilon exonerate:protein2genome:local gene 273831 274373 948 + . gene_id 0 ; sequence GL50803_17090-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 273831 274373 . + . utg731_pilon exonerate:protein2genome:local exon 273831 274373 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 273831 274373 948 + . alignment_id 0 ; Query GL50803_17090-t26_1-p1 ; Align 273831 1 543 utg731_pilon exonerate:protein2genome:local gene 273099 273922 1171 - . gene_id 0 ; sequence GL50803_17091-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 273099 273922 . - . utg731_pilon exonerate:protein2genome:local exon 273099 273922 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 273099 273922 1171 - . alignment_id 0 ; Query GL50803_17091-t26_1-p1 ; Align 273923 1 111 ; Align 273810 39 711 utg731_pilon exonerate:protein2genome:local gene 263576 269122 7547 - . gene_id 0 ; sequence GL50803_17092-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 263576 269122 . - . utg731_pilon exonerate:protein2genome:local exon 263576 269122 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 263576 269122 7547 - . alignment_id 0 ; Query GL50803_17092-t26_1-p1 ; Align 269123 358 5547 utg731_pilon exonerate:protein2genome:local gene 254633 256810 2428 - . gene_id 0 ; sequence GL50803_17094-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 254633 256810 . - . utg731_pilon exonerate:protein2genome:local exon 254633 256810 . - . insertions 3 ; deletions 1 ; frameshifts 3 utg731_pilon exonerate:protein2genome:local similarity 254633 256810 2428 - . alignment_id 0 ; Query GL50803_17094-t26_1-p1 ; Align 256811 1 228 ; Align 256581 78 1482 ; Align 255098 572 297 ; Align 254798 671 165 utg731_pilon exonerate:protein2genome:local gene 228962 231229 3260 + . gene_id 0 ; sequence GL50803_17096-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 228962 231229 . + . utg731_pilon exonerate:protein2genome:local exon 228962 231229 . + . insertions 3 ; deletions 5 ; frameshifts 3 utg731_pilon exonerate:protein2genome:local similarity 228962 231229 3260 + . alignment_id 0 ; Query GL50803_17096-t26_1-p1 ; Align 228962 1 264 ; Align 229227 89 567 ; Align 229796 279 480 ; Align 230276 440 183 ; Align 230462 501 630 ; Align 231092 713 105 ; Align 231197 749 33 utg731_pilon exonerate:protein2genome:local gene 224447 228811 6662 - . gene_id 0 ; sequence GL50803_17097-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 224447 228811 . - . utg731_pilon exonerate:protein2genome:local exon 224447 228811 . - . insertions 15 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 224447 228811 6662 - . alignment_id 0 ; Query GL50803_17097-t26_1-p1 ; Align 228812 7 1326 ; Align 227483 449 594 ; Align 226889 648 741 ; Align 226136 895 1689 utg47_pilon exonerate:protein2genome:local gene 660108 660785 1089 + . gene_id 0 ; sequence GL50803_17102-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 660108 660785 . + . utg47_pilon exonerate:protein2genome:local exon 660108 660785 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 660108 660785 1089 + . alignment_id 0 ; Query GL50803_17102-t26_1-p1 ; Align 660108 1 678 utg47_pilon exonerate:protein2genome:local gene 660927 662042 1609 + . gene_id 0 ; sequence GL50803_17103-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 660927 662042 . + . utg47_pilon exonerate:protein2genome:local exon 660927 662042 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 660927 662042 1609 + . alignment_id 0 ; Query GL50803_17103-t26_1-p1 ; Align 660927 1 1116 utg47_pilon exonerate:protein2genome:local gene 663545 664147 995 + . gene_id 0 ; sequence GL50803_17104-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 663545 664147 . + . utg47_pilon exonerate:protein2genome:local exon 663545 664147 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 663545 664147 995 + . alignment_id 0 ; Query GL50803_17104-t26_1-p1 ; Align 663545 1 603 utg47_pilon exonerate:protein2genome:local gene 668435 674314 9349 + . gene_id 0 ; sequence GL50803_17105-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 668435 674314 . + . utg47_pilon exonerate:protein2genome:local exon 668435 674314 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 668435 674314 9349 + . alignment_id 0 ; Query GL50803_17105-t26_1-p1 ; Align 668435 1 5880 utg47_pilon exonerate:protein2genome:local gene 678934 680136 1947 - . gene_id 0 ; sequence GL50803_17106-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 678934 680136 . - . utg47_pilon exonerate:protein2genome:local exon 678934 680136 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 678934 680136 1947 - . alignment_id 0 ; Query GL50803_17106-t26_1-p1 ; Align 680137 1 1203 utg47_pilon exonerate:protein2genome:local gene 684933 688196 4905 - . gene_id 0 ; sequence GL50803_17109-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 684933 688196 . - . utg47_pilon exonerate:protein2genome:local exon 684933 688196 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 684933 688196 4905 - . alignment_id 0 ; Query GL50803_17109-t26_1-p1 ; Align 688197 1 3264 utg47_pilon exonerate:protein2genome:local gene 692073 695015 4313 - . gene_id 0 ; sequence GL50803_17110-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 692073 695015 . - . utg47_pilon exonerate:protein2genome:local exon 692073 695015 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 692073 695015 4313 - . alignment_id 0 ; Query GL50803_17110-t26_1-p1 ; Align 695016 1 2943 utg47_pilon exonerate:protein2genome:local gene 695025 695525 667 - . gene_id 0 ; sequence GL50803_17111-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 695025 695525 . - . utg47_pilon exonerate:protein2genome:local exon 695025 695525 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 695025 695525 667 - . alignment_id 0 ; Query GL50803_17111-t26_1-p1 ; Align 695526 1 501 utg47_pilon exonerate:protein2genome:local gene 697516 698610 1805 - . gene_id 0 ; sequence GL50803_17112-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 697516 698610 . - . utg47_pilon exonerate:protein2genome:local exon 697516 698610 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 697516 698610 1805 - . alignment_id 0 ; Query GL50803_17112-t26_1-p1 ; Align 698611 1 294 ; Align 698317 100 801 utg47_pilon exonerate:protein2genome:local gene 1340448 1342959 2480 + . gene_id 0 ; sequence GL50803_17115-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1340448 1342959 . + . utg47_pilon exonerate:protein2genome:local exon 1340448 1342959 . + . insertions 6 ; deletions 5 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1340448 1342959 2480 + . alignment_id 0 ; Query GL50803_17115-t26_1-p1 ; Align 1340448 1 852 ; Align 1341300 289 102 ; Align 1341405 323 411 ; Align 1341819 460 246 ; Align 1342066 543 894 utg47_pilon exonerate:protein2genome:local gene 1286962 1287610 1102 - . gene_id 0 ; sequence GL50803_17116-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1286962 1287610 . - . utg47_pilon exonerate:protein2genome:local exon 1286962 1287610 . - . insertions 0 ; deletions 0 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 1286962 1287610 1102 - . alignment_id 0 ; Query GL50803_17116-t26_1-p1 ; Align 1287611 1 357 ; Align 1287252 120 102 ; Align 1287148 154 186 utg47_pilon exonerate:protein2genome:local gene 1271028 1273195 2767 + . gene_id 0 ; sequence GL50803_17117-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1271028 1273195 . + . utg47_pilon exonerate:protein2genome:local exon 1271028 1273195 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1271028 1273195 2767 + . alignment_id 0 ; Query GL50803_17117-t26_1-p1 ; Align 1271028 1 1446 ; Align 1272476 484 375 ; Align 1272851 610 345 utg47_pilon exonerate:protein2genome:local gene 1274158 1277626 4158 - . gene_id 0 ; sequence GL50803_17118-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1274158 1277626 . - . utg47_pilon exonerate:protein2genome:local exon 1274158 1277626 . - . insertions 0 ; deletions 5 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 1274158 1277626 4158 - . alignment_id 0 ; Query GL50803_17118-t26_1-p1 ; Align 1277627 1 954 ; Align 1276672 319 36 ; Align 1276636 334 78 ; Align 1276557 360 189 ; Align 1276368 424 1839 ; Align 1274527 1037 3 ; Align 1274524 1039 366 utg47_pilon exonerate:protein2genome:local gene 1257054 1259540 2784 - . gene_id 0 ; sequence GL50803_17119-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1258770 1259540 . - . utg47_pilon exonerate:protein2genome:local exon 1258770 1259540 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1258768 1258769 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1258581 1258769 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1258581 1258582 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1257054 1258580 . - . utg47_pilon exonerate:protein2genome:local exon 1257054 1258580 . - . insertions 3 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1257054 1259540 2784 - . alignment_id 0 ; Query GL50803_17119-t26_1-p1 ; Align 1259541 1 201 ; Align 1259337 68 567 ; Align 1258581 257 24 ; Align 1258554 265 273 ; Align 1258281 357 594 ; Align 1257687 557 633 utg47_pilon exonerate:protein2genome:local gene 1236399 1238012 2488 + . gene_id 0 ; sequence GL50803_17120-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1236399 1238012 . + . utg47_pilon exonerate:protein2genome:local exon 1236399 1238012 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1236399 1238012 2488 + . alignment_id 0 ; Query GL50803_17120-t26_1-p1 ; Align 1236399 1 1614 utg11_pilon exonerate:protein2genome:local gene 1321115 1323145 3325 - . gene_id 0 ; sequence GL50803_17121-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1321115 1323145 . - . utg11_pilon exonerate:protein2genome:local exon 1321115 1323145 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1321115 1323145 3325 - . alignment_id 0 ; Query GL50803_17121-t26_1-p1 ; Align 1323146 1 2031 utg11_pilon exonerate:protein2genome:local gene 1310474 1315528 6068 - . gene_id 0 ; sequence GL50803_17123-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1310474 1315528 . - . utg11_pilon exonerate:protein2genome:local exon 1310474 1315528 . - . insertions 9 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 1310474 1315528 6068 - . alignment_id 0 ; Query GL50803_17123-t26_1-p1 ; Align 1315529 1 576 ; Align 1314953 197 4278 ; Align 1310666 1623 192 utg11_pilon exonerate:protein2genome:local gene 1301463 1302230 560 + . gene_id 0 ; sequence GL50803_17125-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1301463 1302230 . + . utg11_pilon exonerate:protein2genome:local exon 1301463 1302230 . + . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 1301463 1302230 560 + . alignment_id 0 ; Query GL50803_17125-t26_1-p1 ; Align 1301463 1 234 ; Align 1301697 82 534 utg11_pilon exonerate:protein2genome:local gene 1300556 1301227 921 - . gene_id 0 ; sequence GL50803_17126-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1300556 1301227 . - . utg11_pilon exonerate:protein2genome:local exon 1300556 1301227 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1300556 1301227 921 - . alignment_id 0 ; Query GL50803_17126-t26_1-p1 ; Align 1301228 86 672 utg11_pilon exonerate:protein2genome:local gene 1298565 1300208 2084 - . gene_id 0 ; sequence GL50803_17127-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1298565 1300208 . - . utg11_pilon exonerate:protein2genome:local exon 1298565 1300208 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1298565 1300208 2084 - . alignment_id 0 ; Query GL50803_17127-t26_1-p1 ; Align 1300209 1 912 ; Align 1299297 306 732 utg11_pilon exonerate:protein2genome:local gene 1291926 1292717 984 - . gene_id 0 ; sequence GL50803_17129-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1291926 1292717 . - . utg11_pilon exonerate:protein2genome:local exon 1291926 1292717 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1291926 1292717 984 - . alignment_id 0 ; Query GL50803_17129-t26_1-p1 ; Align 1292718 1 792 utg11_pilon exonerate:protein2genome:local gene 707682 708101 356 - . gene_id 0 ; sequence GL50803_1713-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 707682 708101 . - . utg11_pilon exonerate:protein2genome:local exon 707682 708101 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 707682 708101 356 - . alignment_id 0 ; Query GL50803_1713-t26_1-p1 ; Align 708102 46 420 utg11_pilon exonerate:protein2genome:local gene 1278196 1282749 6044 + . gene_id 0 ; sequence GL50803_17130-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1278196 1279037 . + . utg11_pilon exonerate:protein2genome:local exon 1278196 1279037 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1279038 1279039 . + . intron_id 1 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 1279038 1279091 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1279090 1279091 . + . intron_id 0 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 1279092 1282015 . + . utg11_pilon exonerate:protein2genome:local exon 1279092 1282015 . + . insertions 0 ; deletions 11 utg11_pilon exonerate:protein2genome:local splice5 1282016 1282017 . + . intron_id 2 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 1282016 1282054 . + . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 1282053 1282054 . + . intron_id 1 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1282055 1282749 . + . utg11_pilon exonerate:protein2genome:local exon 1282055 1282749 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1278196 1282749 6044 + . alignment_id 0 ; Query GL50803_17130-t26_1-p1 ; Align 1278196 1 840 ; Align 1279093 282 153 ; Align 1279246 336 78 ; Align 1279324 363 666 ; Align 1279990 586 93 ; Align 1280083 618 1308 ; Align 1281391 1059 624 ; Align 1282057 1268 693 utg11_pilon exonerate:protein2genome:local gene 1259978 1263234 4619 - . gene_id 0 ; sequence GL50803_17132-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1259978 1263234 . - . utg11_pilon exonerate:protein2genome:local exon 1259978 1263234 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 1259978 1263234 4619 - . alignment_id 0 ; Query GL50803_17132-t26_1-p1 ; Align 1263235 481 2769 ; Align 1260465 1404 381 ; Align 1260083 1531 105 utg11_pilon exonerate:protein2genome:local gene 1256728 1259010 2126 - . gene_id 0 ; sequence GL50803_17134-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1256728 1259010 . - . utg11_pilon exonerate:protein2genome:local exon 1256728 1259010 . - . insertions 3 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 1256728 1259010 2126 - . alignment_id 0 ; Query GL50803_17134-t26_1-p1 ; Align 1259011 1 843 ; Align 1258168 283 207 ; Align 1257961 353 102 ; Align 1257856 387 288 ; Align 1257568 484 336 ; Align 1257232 597 504 utg11_pilon exonerate:protein2genome:local gene 1183237 1185102 2821 - . gene_id 0 ; sequence GL50803_17139-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1183842 1185102 . - . utg11_pilon exonerate:protein2genome:local exon 1183842 1185102 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1183840 1183841 . - . intron_id 1 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local intron 1183812 1183841 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1183812 1183813 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1183237 1183811 . - . utg11_pilon exonerate:protein2genome:local exon 1183237 1183811 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1183237 1185102 2821 - . alignment_id 0 ; Query GL50803_17139-t26_1-p1 ; Align 1185103 1 1260 ; Align 1183810 422 9 ; Align 1183801 426 564 utg11_pilon exonerate:protein2genome:local gene 1188366 1191644 3809 - . gene_id 0 ; sequence GL50803_17140-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1188366 1191644 . - . utg11_pilon exonerate:protein2genome:local exon 1188366 1191644 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1188366 1191644 3809 - . alignment_id 0 ; Query GL50803_17140-t26_1-p1 ; Align 1191645 1 2841 ; Align 1188804 950 438 utg11_pilon exonerate:protein2genome:local gene 1224432 1226087 2825 + . gene_id 0 ; sequence GL50803_17143-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1224432 1226087 . + . utg11_pilon exonerate:protein2genome:local exon 1224432 1226087 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1224432 1226087 2825 + . alignment_id 0 ; Query GL50803_17143-t26_1-p1 ; Align 1224432 2 1656 utg11_pilon exonerate:protein2genome:local gene 1234427 1236031 1660 + . gene_id 0 ; sequence GL50803_17145-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1234427 1236031 . + . utg11_pilon exonerate:protein2genome:local exon 1234427 1236031 . + . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 1234427 1236031 1660 + . alignment_id 0 ; Query GL50803_17145-t26_1-p1 ; Align 1234427 1 672 ; Align 1235099 226 627 ; Align 1235726 437 306 utg11_pilon exonerate:protein2genome:local gene 1236947 1241020 6015 + . gene_id 0 ; sequence GL50803_17146-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1236947 1241020 . + . utg11_pilon exonerate:protein2genome:local exon 1236947 1241020 . + . insertions 3 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 1236947 1241020 6015 + . alignment_id 0 ; Query GL50803_17146-t26_1-p1 ; Align 1236947 1 1173 ; Align 1238123 392 2118 ; Align 1240241 1099 375 ; Align 1240616 1227 405 utg47_pilon exonerate:protein2genome:local gene 382732 384168 2237 - . gene_id 0 ; sequence GL50803_17149-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 382732 384168 . - . utg47_pilon exonerate:protein2genome:local exon 382732 384168 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 382732 384168 2237 - . alignment_id 0 ; Query GL50803_17149-t26_1-p1 ; Align 384169 15 1437 utg47_pilon exonerate:protein2genome:local gene 366059 366551 732 - . gene_id 0 ; sequence GL50803_17150-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 366059 366551 . - . utg47_pilon exonerate:protein2genome:local exon 366059 366551 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 366059 366551 732 - . alignment_id 0 ; Query GL50803_17150-t26_1-p1 ; Align 366552 1 39 ; Align 366512 14 453 utg47_pilon exonerate:protein2genome:local gene 365498 366001 819 - . gene_id 0 ; sequence GL50803_17151-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 365498 366001 . - . utg47_pilon exonerate:protein2genome:local exon 365498 366001 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 365498 366001 819 - . alignment_id 0 ; Query GL50803_17151-t26_1-p1 ; Align 366002 1 504 utg47_pilon exonerate:protein2genome:local gene 363444 365449 2545 + . gene_id 0 ; sequence GL50803_17152-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 363444 365449 . + . utg47_pilon exonerate:protein2genome:local exon 363444 365449 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 363444 365449 2545 + . alignment_id 0 ; Query GL50803_17152-t26_1-p1 ; Align 363444 1 714 ; Align 364160 240 1290 utg47_pilon exonerate:protein2genome:local gene 355480 356400 1499 - . gene_id 0 ; sequence GL50803_17153-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 355480 356400 . - . utg47_pilon exonerate:protein2genome:local exon 355480 356400 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 355480 356400 1499 - . alignment_id 0 ; Query GL50803_17153-t26_1-p1 ; Align 356401 1 921 utg47_pilon exonerate:protein2genome:local gene 350373 351197 1301 + . gene_id 0 ; sequence GL50803_17154-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 350373 351197 . + . utg47_pilon exonerate:protein2genome:local exon 350373 351197 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 350373 351197 1301 + . alignment_id 0 ; Query GL50803_17154-t26_1-p1 ; Align 350373 1 825 utg47_pilon exonerate:protein2genome:local gene 347653 349488 2632 - . gene_id 0 ; sequence GL50803_17155-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 347653 349488 . - . utg47_pilon exonerate:protein2genome:local exon 347653 349488 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 347653 349488 2632 - . alignment_id 0 ; Query GL50803_17155-t26_1-p1 ; Align 349489 1 1836 utg99_pilon exonerate:protein2genome:local gene 245150 246508 2208 + . gene_id 0 ; sequence GL50803_17157-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 245150 246508 . + . utg99_pilon exonerate:protein2genome:local exon 245150 246508 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 245150 246508 2208 + . alignment_id 0 ; Query GL50803_17157-t26_1-p1 ; Align 245150 1 1359 utg47_pilon exonerate:protein2genome:local gene 2246157 2247221 1489 + . gene_id 0 ; sequence GL50803_17161-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2246157 2247221 . + . utg47_pilon exonerate:protein2genome:local exon 2246157 2247221 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2246157 2247221 1489 + . alignment_id 0 ; Query GL50803_17161-t26_1-p1 ; Align 2246157 1 1065 utg47_pilon exonerate:protein2genome:local gene 2238900 2239403 894 + . gene_id 0 ; sequence GL50803_17163-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2238900 2239403 . + . utg47_pilon exonerate:protein2genome:local exon 2238900 2239403 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2238900 2239403 894 + . alignment_id 0 ; Query GL50803_17163-t26_1-p1 ; Align 2238900 1 504 utg47_pilon exonerate:protein2genome:local gene 2235903 2238815 4537 + . gene_id 0 ; sequence GL50803_17164-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2235903 2238815 . + . utg47_pilon exonerate:protein2genome:local exon 2235903 2238815 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2235903 2238815 4537 + . alignment_id 0 ; Query GL50803_17164-t26_1-p1 ; Align 2235903 1 2913 utg47_pilon exonerate:protein2genome:local gene 2233272 2235842 4027 + . gene_id 0 ; sequence GL50803_17165-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2233272 2235842 . + . utg47_pilon exonerate:protein2genome:local exon 2233272 2235842 . + . insertions 12 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2233272 2235842 4027 + . alignment_id 0 ; Query GL50803_17165-t26_1-p1 ; Align 2233272 26 471 ; Align 2233755 183 2088 utg47_pilon exonerate:protein2genome:local gene 2231104 2232663 1902 + . gene_id 0 ; sequence GL50803_17166-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2231104 2232663 . + . utg47_pilon exonerate:protein2genome:local exon 2231104 2232663 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2231104 2232663 1902 + . alignment_id 0 ; Query GL50803_17166-t26_1-p1 ; Align 2231104 1 1560 utg47_pilon exonerate:protein2genome:local gene 2229743 2231088 1790 - . gene_id 0 ; sequence GL50803_17167-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2229743 2231088 . - . utg47_pilon exonerate:protein2genome:local exon 2229743 2231088 . - . insertions 0 ; deletions 2 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 2229743 2231088 1790 - . alignment_id 0 ; Query GL50803_17167-t26_1-p1 ; Align 2231089 1 567 ; Align 2230521 190 156 ; Align 2230364 242 507 ; Align 2229857 413 114 utg47_pilon exonerate:protein2genome:local gene 2224989 2229065 3410 - . gene_id 0 ; sequence GL50803_17168-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2224989 2229065 . - . utg47_pilon exonerate:protein2genome:local exon 2224989 2229065 . - . insertions 27 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 2224989 2229065 3410 - . alignment_id 0 ; Query GL50803_17168-t26_1-p1 ; Align 2229066 1 978 ; Align 2228088 330 213 ; Align 2227875 402 336 ; Align 2227530 514 84 ; Align 2227440 542 480 ; Align 2226954 702 846 ; Align 2226105 984 612 ; Align 2225490 1188 501 utg47_pilon exonerate:protein2genome:local gene 2221012 2224077 3630 - . gene_id 0 ; sequence GL50803_17169-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2221012 2224077 . - . utg47_pilon exonerate:protein2genome:local exon 2221012 2224077 . - . insertions 3 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 2221012 2224077 3630 - . alignment_id 0 ; Query GL50803_17169-t26_1-p1 ; Align 2224078 1 924 ; Align 2223151 309 738 ; Align 2222413 556 594 ; Align 2221819 755 807 utg47_pilon exonerate:protein2genome:local gene 2207068 2211672 5552 - . gene_id 0 ; sequence GL50803_17170-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2207068 2211672 . - . utg47_pilon exonerate:protein2genome:local exon 2207068 2211672 . - . insertions 39 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2207068 2211672 5552 - . alignment_id 0 ; Query GL50803_17170-t26_1-p1 ; Align 2211673 1 264 ; Align 2211406 89 969 ; Align 2210431 412 1881 ; Align 2208535 1039 117 ; Align 2208415 1078 936 ; Align 2207479 1391 183 ; Align 2207284 1452 216 utg47_pilon exonerate:protein2genome:local gene 2203782 2206676 3213 - . gene_id 0 ; sequence GL50803_17172-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2203782 2206676 . - . utg47_pilon exonerate:protein2genome:local exon 2203782 2206676 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2203782 2206676 3213 - . alignment_id 0 ; Query GL50803_17172-t26_1-p1 ; Align 2206677 1 2895 utg47_pilon exonerate:protein2genome:local gene 2186140 2191854 7938 + . gene_id 0 ; sequence GL50803_17174-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2186140 2191854 . + . utg47_pilon exonerate:protein2genome:local exon 2186140 2191854 . + . insertions 9 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2186140 2191854 7938 + . alignment_id 0 ; Query GL50803_17174-t26_1-p1 ; Align 2186140 1 2031 ; Align 2188171 679 1689 ; Align 2189863 1242 507 ; Align 2190373 1411 270 ; Align 2190646 1501 1209 utg47_pilon exonerate:protein2genome:local gene 2183492 2186080 2537 - . gene_id 0 ; sequence GL50803_17175-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2183492 2186080 . - . utg47_pilon exonerate:protein2genome:local exon 2183492 2186080 . - . insertions 15 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2183492 2186080 2537 - . alignment_id 0 ; Query GL50803_17175-t26_1-p1 ; Align 2186081 1 429 ; Align 2185637 144 2145 utg47_pilon exonerate:protein2genome:local gene 2173770 2175779 2160 - . gene_id 0 ; sequence GL50803_17176-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2174703 2175779 . - . utg47_pilon exonerate:protein2genome:local exon 2174703 2175779 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 2174701 2174702 . - . intron_id 1 ; splice_site "TC" utg47_pilon exonerate:protein2genome:local intron 2174673 2174702 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 2174673 2174674 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2173770 2174672 . - . utg47_pilon exonerate:protein2genome:local exon 2173770 2174672 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2173770 2175779 2160 - . alignment_id 0 ; Query GL50803_17176-t26_1-p1 ; Align 2175780 307 1077 ; Align 2174673 666 903 utg731_pilon exonerate:protein2genome:local gene 905855 909571 5907 + . gene_id 0 ; sequence GL50803_17187-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 905855 909571 . + . utg731_pilon exonerate:protein2genome:local exon 905855 909571 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 905855 909571 5907 + . alignment_id 0 ; Query GL50803_17187-t26_1-p1 ; Align 905855 1 1107 ; Align 906965 370 2607 utg731_pilon exonerate:protein2genome:local gene 918749 920848 1968 + . gene_id 0 ; sequence GL50803_17188-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 918749 920848 . + . utg731_pilon exonerate:protein2genome:local exon 918749 920848 . + . insertions 0 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 918749 920848 1968 + . alignment_id 0 ; Query GL50803_17188-t26_1-p1 ; Align 918749 1 891 ; Align 919640 299 198 ; Align 919838 369 1011 utg731_pilon exonerate:protein2genome:local gene 921888 929036 9522 + . gene_id 0 ; sequence GL50803_17189-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 921888 929036 . + . utg731_pilon exonerate:protein2genome:local exon 921888 929036 . + . insertions 0 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 921888 929036 9522 + . alignment_id 0 ; Query GL50803_17189-t26_1-p1 ; Align 921888 1 324 ; Align 922212 110 6510 ; Align 928722 2282 210 ; Align 928932 2354 105 utg731_pilon exonerate:protein2genome:local gene 931361 932731 2223 - . gene_id 0 ; sequence GL50803_17190-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 931361 932731 . - . utg731_pilon exonerate:protein2genome:local exon 931361 932731 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 931361 932731 2223 - . alignment_id 0 ; Query GL50803_17190-t26_1-p1 ; Align 932732 1 1371 utg265_pilon exonerate:protein2genome:local gene 507079 510429 4045 - . gene_id 0 ; sequence GL50803_17192-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 507079 510429 . - . utg265_pilon exonerate:protein2genome:local exon 507079 510429 . - . insertions 12 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 507079 510429 4045 - . alignment_id 0 ; Query GL50803_17192-t26_1-p1 ; Align 510430 145 471 ; Align 509959 303 1770 ; Align 508177 893 1098 utg265_pilon exonerate:protein2genome:local gene 498628 501518 3362 + . gene_id 0 ; sequence GL50803_17193-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 498628 501518 . + . utg265_pilon exonerate:protein2genome:local exon 498628 501518 . + . insertions 0 ; deletions 7 ; frameshifts 5 utg265_pilon exonerate:protein2genome:local similarity 498628 501518 3362 + . alignment_id 0 ; Query GL50803_17193-t26_1-p1 ; Align 498628 1 423 ; Align 499053 143 111 ; Align 499165 180 651 ; Align 499816 400 213 ; Align 500030 471 606 ; Align 500637 673 123 ; Align 500760 715 39 ; Align 500799 729 180 ; Align 500979 790 540 utg265_pilon exonerate:protein2genome:local gene 483451 483984 911 + . gene_id 0 ; sequence GL50803_17195-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 483451 483984 . + . utg265_pilon exonerate:protein2genome:local exon 483451 483984 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 483451 483984 911 + . alignment_id 0 ; Query GL50803_17195-t26_1-p1 ; Align 483451 1 534 utg265_pilon exonerate:protein2genome:local gene 448189 449310 1519 - . gene_id 0 ; sequence GL50803_17198-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 448189 449310 . - . utg265_pilon exonerate:protein2genome:local exon 448189 449310 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 448189 449310 1519 - . alignment_id 0 ; Query GL50803_17198-t26_1-p1 ; Align 449311 1 1122 utg265_pilon exonerate:protein2genome:local gene 444692 446862 3023 - . gene_id 0 ; sequence GL50803_17199-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 444949 446862 . - . utg265_pilon exonerate:protein2genome:local exon 444949 446862 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local splice5 444947 444948 . - . intron_id 1 ; splice_site "GC" utg265_pilon exonerate:protein2genome:local intron 444919 444948 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 444919 444920 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 444692 444918 . - . utg265_pilon exonerate:protein2genome:local exon 444692 444918 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 444692 446862 3023 - . alignment_id 0 ; Query GL50803_17199-t26_1-p1 ; Align 446863 28 912 ; Align 445949 333 999 ; Align 444917 668 225 utg265_pilon exonerate:protein2genome:local gene 441973 443499 1692 - . gene_id 0 ; sequence GL50803_17200-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 441973 443499 . - . utg265_pilon exonerate:protein2genome:local exon 441973 443499 . - . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 441973 443499 1692 - . alignment_id 0 ; Query GL50803_17200-t26_1-p1 ; Align 443500 1 129 ; Align 443371 46 120 ; Align 443251 87 87 ; Align 443164 117 1191 utg265_pilon exonerate:protein2genome:local gene 418830 423264 4472 + . gene_id 0 ; sequence GL50803_17202-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 418830 422560 . + . utg265_pilon exonerate:protein2genome:local exon 418830 422560 . + . insertions 3 ; deletions 4 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local splice5 422561 422562 . + . intron_id 1 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local intron 422561 422597 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 422596 422597 . + . intron_id 0 ; splice_site "AC" utg265_pilon exonerate:protein2genome:local cds 422598 423264 . + . utg265_pilon exonerate:protein2genome:local exon 422598 423264 . + . insertions 3 ; deletions 0 ; frameshifts 5 utg265_pilon exonerate:protein2genome:local similarity 418830 423264 4472 + . alignment_id 0 ; Query GL50803_17202-t26_1-p1 ; Align 418830 1 408 ; Align 419238 138 705 ; Align 419944 373 45 ; Align 419989 391 2196 ; Align 422188 1123 372 ; Align 422600 1248 162 ; Align 422767 1302 216 ; Align 422986 1374 279 utg265_pilon exonerate:protein2genome:local gene 417103 418173 1532 + . gene_id 0 ; sequence GL50803_17203-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 417103 418173 . + . utg265_pilon exonerate:protein2genome:local exon 417103 418173 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 417103 418173 1532 + . alignment_id 0 ; Query GL50803_17203-t26_1-p1 ; Align 417103 6 1071 utg265_pilon exonerate:protein2genome:local gene 414265 416164 2700 + . gene_id 0 ; sequence GL50803_17205-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 414265 416164 . + . utg265_pilon exonerate:protein2genome:local exon 414265 416164 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 414265 416164 2700 + . alignment_id 0 ; Query GL50803_17205-t26_1-p1 ; Align 414265 1 1758 ; Align 416024 587 141 utg18_pilon exonerate:protein2genome:local gene 144994 145593 940 - . gene_id 0 ; sequence GL50803_1721-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 144994 145593 . - . utg18_pilon exonerate:protein2genome:local exon 144994 145593 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 144994 145593 940 - . alignment_id 0 ; Query GL50803_1721-t26_1-p1 ; Align 145594 1 600 utg731_pilon exonerate:protein2genome:local gene 1266773 1267567 787 + . gene_id 0 ; sequence GL50803_17212-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1266773 1267139 . + . utg731_pilon exonerate:protein2genome:local exon 1266773 1267139 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1267140 1267141 . + . intron_id 1 ; splice_site "AC" utg731_pilon exonerate:protein2genome:local intron 1267140 1267313 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1267312 1267313 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1267314 1267567 . + . utg731_pilon exonerate:protein2genome:local exon 1267314 1267567 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1266773 1267567 787 + . alignment_id 0 ; Query GL50803_17212-t26_1-p1 ; Align 1266773 1 21 ; Align 1266797 8 342 ; Align 1267316 123 252 utg11_pilon exonerate:protein2genome:local gene 730398 731768 2093 + . gene_id 0 ; sequence GL50803_17214-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 730398 731768 . + . utg11_pilon exonerate:protein2genome:local exon 730398 731768 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 730398 731768 2093 + . alignment_id 0 ; Query GL50803_17214-t26_1-p1 ; Align 730398 4 1371 utg11_pilon exonerate:protein2genome:local gene 718426 720914 3113 + . gene_id 0 ; sequence GL50803_17216-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 718426 720914 . + . utg11_pilon exonerate:protein2genome:local exon 718426 720914 . + . insertions 0 ; deletions 5 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 718426 720914 3113 + . alignment_id 0 ; Query GL50803_17216-t26_1-p1 ; Align 718426 8 753 ; Align 719181 260 351 ; Align 719532 381 1383 utg11_pilon exonerate:protein2genome:local gene 698685 702415 4442 - . gene_id 0 ; sequence GL50803_17217-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 698685 702415 . - . utg11_pilon exonerate:protein2genome:local exon 698685 702415 . - . insertions 3 ; deletions 6 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 698685 702415 4442 - . alignment_id 0 ; Query GL50803_17217-t26_1-p1 ; Align 702416 1 2118 ; Align 700295 707 315 ; Align 699980 815 84 ; Align 699894 844 690 ; Align 699204 1076 519 utg11_pilon exonerate:protein2genome:local gene 677595 679148 2002 - . gene_id 0 ; sequence GL50803_17219-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 677595 679148 . - . utg11_pilon exonerate:protein2genome:local exon 677595 679148 . - . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 677595 679148 2002 - . alignment_id 0 ; Query GL50803_17219-t26_1-p1 ; Align 679149 267 90 ; Align 679059 300 1464 utg364_pilon exonerate:protein2genome:local gene 66325 69561 4898 - . gene_id 0 ; sequence GL50803_17223-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 66325 69561 . - . utg364_pilon exonerate:protein2genome:local exon 66325 69561 . - . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 66325 69561 4898 - . alignment_id 0 ; Query GL50803_17223-t26_1-p1 ; Align 69562 1 3237 utg364_pilon exonerate:protein2genome:local gene 77107 78003 1452 - . gene_id 0 ; sequence GL50803_17224-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 77107 78003 . - . utg364_pilon exonerate:protein2genome:local exon 77107 78003 . - . insertions 3 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 77107 78003 1452 - . alignment_id 0 ; Query GL50803_17224-t26_1-p1 ; Align 78004 1 873 ; Align 77128 292 21 utg16500_pilon exonerate:protein2genome:local gene 16223 17119 1452 - . gene_id 0 ; sequence GL50803_17224-t26_1-p1 ; gene_orientation . utg16500_pilon exonerate:protein2genome:local cds 16223 17119 . - . utg16500_pilon exonerate:protein2genome:local exon 16223 17119 . - . insertions 3 ; deletions 0 utg16500_pilon exonerate:protein2genome:local similarity 16223 17119 1452 - . alignment_id 0 ; Query GL50803_17224-t26_1-p1 ; Align 17120 1 873 ; Align 16244 292 21 utg16500_pilon exonerate:protein2genome:local gene 19848 21557 2384 - . gene_id 0 ; sequence GL50803_17227-t26_1-p1 ; gene_orientation . utg16500_pilon exonerate:protein2genome:local cds 19848 21557 . - . utg16500_pilon exonerate:protein2genome:local exon 19848 21557 . - . insertions 0 ; deletions 0 utg16500_pilon exonerate:protein2genome:local similarity 19848 21557 2384 - . alignment_id 0 ; Query GL50803_17227-t26_1-p1 ; Align 21558 1 1710 utg47_pilon exonerate:protein2genome:local gene 1634958 1660786 3907 - . gene_id 0 ; sequence GL50803_17229-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1657589 1660786 . - . utg47_pilon exonerate:protein2genome:local exon 1657589 1660786 . - . insertions 12 ; deletions 12 utg47_pilon exonerate:protein2genome:local splice5 1657587 1657588 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1634979 1657588 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1634979 1634980 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1634958 1634978 . - . utg47_pilon exonerate:protein2genome:local exon 1634958 1634978 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1634958 1660786 3907 - . alignment_id 0 ; Query GL50803_17229-t26_1-p1 ; Align 1660787 1 513 ; Align 1660274 176 75 ; Align 1660187 201 600 ; Align 1659587 403 129 ; Align 1659458 448 180 ; Align 1659278 510 1011 ; Align 1658267 848 39 ; Align 1658228 862 639 ; Align 1634979 1075 21 utg731_pilon exonerate:protein2genome:local gene 1517133 1518065 1555 - . gene_id 0 ; sequence GL50803_17230-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1517133 1518065 . - . utg731_pilon exonerate:protein2genome:local exon 1517133 1518065 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1517133 1518065 1555 - . alignment_id 0 ; Query GL50803_17230-t26_1-p1 ; Align 1518066 1 933 utg731_pilon exonerate:protein2genome:local gene 1518309 1521314 4723 - . gene_id 0 ; sequence GL50803_17231-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1518309 1521314 . - . utg731_pilon exonerate:protein2genome:local exon 1518309 1521314 . - . insertions 0 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 1518309 1521314 4723 - . alignment_id 0 ; Query GL50803_17231-t26_1-p1 ; Align 1521315 1 1599 ; Align 1519716 538 1407 utg731_pilon exonerate:protein2genome:local gene 1525128 1527164 2614 - . gene_id 0 ; sequence GL50803_17232-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1525128 1527164 . - . utg731_pilon exonerate:protein2genome:local exon 1525128 1527164 . - . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1525128 1527164 2614 - . alignment_id 0 ; Query GL50803_17232-t26_1-p1 ; Align 1527165 1 237 ; Align 1526928 82 591 ; Align 1526337 280 1209 utg731_pilon exonerate:protein2genome:local gene 1566968 1568983 3051 + . gene_id 0 ; sequence GL50803_17236-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1566968 1568983 . + . utg731_pilon exonerate:protein2genome:local exon 1566968 1568983 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1566968 1568983 3051 + . alignment_id 0 ; Query GL50803_17236-t26_1-p1 ; Align 1566968 1 906 ; Align 1567874 304 1110 utg731_pilon exonerate:protein2genome:local gene 1571719 1572234 634 + . gene_id 0 ; sequence GL50803_17237-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1571719 1572234 . + . utg731_pilon exonerate:protein2genome:local exon 1571719 1572234 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1571719 1572234 634 + . alignment_id 0 ; Query GL50803_17237-t26_1-p1 ; Align 1571719 1 417 ; Align 1572136 141 99 utg731_pilon exonerate:protein2genome:local gene 1574497 1576329 1989 - . gene_id 0 ; sequence GL50803_17238-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1574497 1576329 . - . utg731_pilon exonerate:protein2genome:local exon 1574497 1576329 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1574497 1576329 1989 - . alignment_id 0 ; Query GL50803_17238-t26_1-p1 ; Align 1576330 1 906 ; Align 1575421 303 924 utg731_pilon exonerate:protein2genome:local gene 1572788 1574505 1930 + . gene_id 0 ; sequence GL50803_17239-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1572788 1574505 . + . utg731_pilon exonerate:protein2genome:local exon 1572788 1574505 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 1572788 1574505 1930 + . alignment_id 0 ; Query GL50803_17239-t26_1-p1 ; Align 1572788 1 90 ; Align 1572880 31 1626 utg731_pilon exonerate:protein2genome:local gene 1483319 1483771 742 + . gene_id 0 ; sequence GL50803_17241-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1483319 1483771 . + . utg731_pilon exonerate:protein2genome:local exon 1483319 1483771 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1483319 1483771 742 + . alignment_id 0 ; Query GL50803_17241-t26_1-p1 ; Align 1483319 1 453 utg731_pilon exonerate:protein2genome:local gene 1468952 1470928 2457 + . gene_id 0 ; sequence GL50803_17242-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1468952 1470928 . + . utg731_pilon exonerate:protein2genome:local exon 1468952 1470928 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1468952 1470928 2457 + . alignment_id 0 ; Query GL50803_17242-t26_1-p1 ; Align 1468952 1 504 ; Align 1469456 170 1392 ; Align 1470848 635 81 utg731_pilon exonerate:protein2genome:local gene 1460878 1465180 6982 - . gene_id 0 ; sequence GL50803_17243-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1460878 1465180 . - . utg731_pilon exonerate:protein2genome:local exon 1460878 1465180 . - . insertions 0 ; deletions 0 ; frameshifts 4 utg731_pilon exonerate:protein2genome:local similarity 1460878 1465180 6982 - . alignment_id 0 ; Query GL50803_17243-t26_1-p1 ; Align 1465181 10 4029 ; Align 1461148 1353 270 utg731_pilon exonerate:protein2genome:local gene 1458255 1459033 1088 - . gene_id 0 ; sequence GL50803_17244-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1458608 1459033 . - . utg731_pilon exonerate:protein2genome:local exon 1458608 1459033 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1458606 1458607 . - . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1458498 1458607 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1458498 1458499 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1458255 1458497 . - . utg731_pilon exonerate:protein2genome:local exon 1458255 1458497 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1458255 1459033 1088 - . alignment_id 0 ; Query GL50803_17244-t26_1-p1 ; Align 1459034 1 426 ; Align 1458498 143 243 utg731_pilon exonerate:protein2genome:local gene 1458255 1458464 348 - . gene_id 0 ; sequence GL50803_17245-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1458255 1458464 . - . utg731_pilon exonerate:protein2genome:local exon 1458255 1458464 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1458255 1458464 348 - . alignment_id 0 ; Query GL50803_17245-t26_1-p1 ; Align 1458465 1 210 utg731_pilon exonerate:protein2genome:local gene 1457590 1458222 813 - . gene_id 0 ; sequence GL50803_17246-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1457590 1458222 . - . utg731_pilon exonerate:protein2genome:local exon 1457590 1458222 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1457590 1458222 813 - . alignment_id 0 ; Query GL50803_17246-t26_1-p1 ; Align 1458223 1 633 utg11_pilon exonerate:protein2genome:local gene 1527108 1532132 7672 + . gene_id 0 ; sequence GL50803_17249-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1527108 1532132 . + . utg11_pilon exonerate:protein2genome:local exon 1527108 1532132 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1527108 1532132 7672 + . alignment_id 0 ; Query GL50803_17249-t26_1-p1 ; Align 1527108 1 5025 utg11_pilon exonerate:protein2genome:local gene 1523331 1525886 3533 + . gene_id 0 ; sequence GL50803_17250-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1523331 1525886 . + . utg11_pilon exonerate:protein2genome:local exon 1523331 1525886 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1523331 1525886 3533 + . alignment_id 0 ; Query GL50803_17250-t26_1-p1 ; Align 1523331 1 585 ; Align 1523916 198 1971 utg11_pilon exonerate:protein2genome:local gene 1517492 1523272 8328 + . gene_id 0 ; sequence GL50803_17251-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1517492 1523272 . + . utg11_pilon exonerate:protein2genome:local exon 1517492 1523272 . + . insertions 9 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 1517492 1523272 8328 + . alignment_id 0 ; Query GL50803_17251-t26_1-p1 ; Align 1517492 1 1215 ; Align 1518707 410 1074 ; Align 1519784 768 15 ; Align 1519805 773 2343 ; Align 1522148 1555 1125 utg11_pilon exonerate:protein2genome:local gene 1500272 1500745 413 + . gene_id 0 ; sequence GL50803_17253-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1500272 1500745 . + . utg11_pilon exonerate:protein2genome:local exon 1500272 1500745 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1500272 1500745 413 + . alignment_id 0 ; Query GL50803_17253-t26_1-p1 ; Align 1500272 1 444 ; Align 1500716 150 30 utg11_pilon exonerate:protein2genome:local gene 1497066 1499021 3153 + . gene_id 0 ; sequence GL50803_17254-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1497066 1499021 . + . utg11_pilon exonerate:protein2genome:local exon 1497066 1499021 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1497066 1499021 3153 + . alignment_id 0 ; Query GL50803_17254-t26_1-p1 ; Align 1497066 1 1956 utg11_pilon exonerate:protein2genome:local gene 1489369 1491360 3232 - . gene_id 0 ; sequence GL50803_17255-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1489369 1491360 . - . utg11_pilon exonerate:protein2genome:local exon 1489369 1491360 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1489369 1491360 3232 - . alignment_id 0 ; Query GL50803_17255-t26_1-p1 ; Align 1491361 1 1992 utg349_pilon exonerate:protein2genome:local gene 451373 451999 647 + . gene_id 0 ; sequence GL50803_17256-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 451373 451999 . + . utg349_pilon exonerate:protein2genome:local exon 451373 451999 . + . insertions 15 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 451373 451999 647 + . alignment_id 0 ; Query GL50803_17256-t26_1-p1 ; Align 451373 1 270 ; Align 451658 91 342 utg64_pilon exonerate:protein2genome:local gene 775066 775713 887 + . gene_id 0 ; sequence GL50803_17258-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 775066 775713 . + . utg64_pilon exonerate:protein2genome:local exon 775066 775713 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 775066 775713 887 + . alignment_id 0 ; Query GL50803_17258-t26_1-p1 ; Align 775066 1 648 utg64_pilon exonerate:protein2genome:local gene 780261 782591 2960 - . gene_id 0 ; sequence GL50803_17259-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 780758 782591 . - . utg64_pilon exonerate:protein2genome:local exon 780758 782591 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 780756 780757 . - . intron_id 1 ; splice_site "CA" utg64_pilon exonerate:protein2genome:local intron 780725 780757 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 780725 780726 . - . intron_id 0 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local cds 780261 780724 . - . utg64_pilon exonerate:protein2genome:local exon 780261 780724 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 780261 782591 2960 - . alignment_id 0 ; Query GL50803_17259-t26_1-p1 ; Align 782592 1 1782 ; Align 780810 596 51 ; Align 780723 614 462 utg64_pilon exonerate:protein2genome:local gene 778150 780252 3037 + . gene_id 0 ; sequence GL50803_17260-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 778150 780252 . + . utg64_pilon exonerate:protein2genome:local exon 778150 780252 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 778150 780252 3037 + . alignment_id 0 ; Query GL50803_17260-t26_1-p1 ; Align 778150 1 2103 utg64_pilon exonerate:protein2genome:local gene 788779 789432 1065 - . gene_id 0 ; sequence GL50803_17261-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 788779 789432 . - . utg64_pilon exonerate:protein2genome:local exon 788779 789432 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 788779 789432 1065 - . alignment_id 0 ; Query GL50803_17261-t26_1-p1 ; Align 789433 1 654 utg64_pilon exonerate:protein2genome:local gene 789731 791233 2257 + . gene_id 0 ; sequence GL50803_17262-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 789731 791233 . + . utg64_pilon exonerate:protein2genome:local exon 789731 791233 . + . insertions 0 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 789731 791233 2257 + . alignment_id 0 ; Query GL50803_17262-t26_1-p1 ; Align 789731 1 516 ; Align 790247 175 27 ; Align 790274 186 960 utg64_pilon exonerate:protein2genome:local gene 791418 792836 2229 + . gene_id 0 ; sequence GL50803_17263-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 791418 792836 . + . utg64_pilon exonerate:protein2genome:local exon 791418 792836 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 791418 792836 2229 + . alignment_id 0 ; Query GL50803_17263-t26_1-p1 ; Align 791418 1 1419 utg64_pilon exonerate:protein2genome:local gene 797890 800284 3513 + . gene_id 0 ; sequence GL50803_17264-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 797890 800284 . + . utg64_pilon exonerate:protein2genome:local exon 797890 800284 . + . insertions 9 ; deletions 1 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 797890 800284 3513 + . alignment_id 0 ; Query GL50803_17264-t26_1-p1 ; Align 797890 1 1116 ; Align 799007 373 399 ; Align 799406 507 459 ; Align 799874 660 411 utg64_pilon exonerate:protein2genome:local gene 807870 815893 13610 + . gene_id 0 ; sequence GL50803_17265-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 807870 815893 . + . utg64_pilon exonerate:protein2genome:local exon 807870 815893 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 807870 815893 13610 + . alignment_id 0 ; Query GL50803_17265-t26_1-p1 ; Align 807870 1 5265 ; Align 813137 1757 2757 utg64_pilon exonerate:protein2genome:local gene 815935 816306 498 + . gene_id 0 ; sequence GL50803_17266-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 815935 816306 . + . utg64_pilon exonerate:protein2genome:local exon 815935 816306 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 815935 816306 498 + . alignment_id 0 ; Query GL50803_17266-t26_1-p1 ; Align 815935 1 372 utg64_pilon exonerate:protein2genome:local gene 889735 890808 1266 + . gene_id 0 ; sequence GL50803_17273-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 889735 890808 . + . utg64_pilon exonerate:protein2genome:local exon 889735 890808 . + . insertions 12 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 889735 890808 1266 + . alignment_id 0 ; Query GL50803_17273-t26_1-p1 ; Align 889735 10 366 ; Align 890113 132 696 utg47_pilon exonerate:protein2genome:local gene 1494983 1495690 878 - . gene_id 0 ; sequence GL50803_17276-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1494983 1495690 . - . utg47_pilon exonerate:protein2genome:local exon 1494983 1495690 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1494983 1495690 878 - . alignment_id 0 ; Query GL50803_17276-t26_1-p1 ; Align 1495691 1 708 utg47_pilon exonerate:protein2genome:local gene 1493189 1494891 2789 - . gene_id 0 ; sequence GL50803_17277-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1493189 1494891 . - . utg47_pilon exonerate:protein2genome:local exon 1493189 1494891 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1493189 1494891 2789 - . alignment_id 0 ; Query GL50803_17277-t26_1-p1 ; Align 1494892 1 1050 ; Align 1493840 352 651 utg47_pilon exonerate:protein2genome:local gene 1491252 1492154 1428 + . gene_id 0 ; sequence GL50803_17278-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1491252 1492154 . + . utg47_pilon exonerate:protein2genome:local exon 1491252 1492154 . + . insertions 12 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1491252 1492154 1428 + . alignment_id 0 ; Query GL50803_17278-t26_1-p1 ; Align 1491252 1 360 ; Align 1491615 121 54 ; Align 1491678 139 477 utg47_pilon exonerate:protein2genome:local gene 1489898 1491274 1548 - . gene_id 0 ; sequence GL50803_17279-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1489898 1491274 . - . utg47_pilon exonerate:protein2genome:local exon 1489898 1491274 . - . insertions 3 ; deletions 5 ; frameshifts 3 utg47_pilon exonerate:protein2genome:local similarity 1489898 1491274 1548 - . alignment_id 0 ; Query GL50803_17279-t26_1-p1 ; Align 1491275 1 42 ; Align 1491230 15 39 ; Align 1491190 28 159 ; Align 1491031 85 261 ; Align 1490768 173 870 utg47_pilon exonerate:protein2genome:local gene 1488944 1489831 1295 + . gene_id 0 ; sequence GL50803_17280-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1488944 1489831 . + . utg47_pilon exonerate:protein2genome:local exon 1488944 1489831 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1488944 1489831 1295 + . alignment_id 0 ; Query GL50803_17280-t26_1-p1 ; Align 1488944 1 888 utg47_pilon exonerate:protein2genome:local gene 1471592 1476187 6693 - . gene_id 0 ; sequence GL50803_17283-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1473661 1476187 . - . utg47_pilon exonerate:protein2genome:local exon 1473661 1476187 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1473659 1473660 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1473628 1473660 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1473628 1473629 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1471592 1473627 . - . utg47_pilon exonerate:protein2genome:local exon 1471592 1473627 . - . insertions 9 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1471592 1476187 6693 - . alignment_id 0 ; Query GL50803_17283-t26_1-p1 ; Align 1476188 1 648 ; Align 1475540 218 1800 ; Align 1473740 819 78 ; Align 1473626 846 6 ; Align 1473620 850 405 ; Align 1473209 985 1326 ; Align 1471880 1427 288 utg47_pilon exonerate:protein2genome:local gene 1449510 1451678 1851 + . gene_id 0 ; sequence GL50803_17284-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1449510 1451189 . + . utg47_pilon exonerate:protein2genome:local exon 1449510 1451189 . + . insertions 12 ; deletions 4 utg47_pilon exonerate:protein2genome:local splice5 1451190 1451191 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1451190 1451219 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1451218 1451219 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1451220 1451678 . + . utg47_pilon exonerate:protein2genome:local exon 1451220 1451678 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1449510 1451678 1851 + . alignment_id 0 ; Query GL50803_17284-t26_1-p1 ; Align 1449510 12 957 ; Align 1450467 332 183 ; Align 1450653 393 300 ; Align 1450959 493 156 ; Align 1451118 545 36 ; Align 1451154 560 36 ; Align 1451220 572 144 ; Align 1451364 622 315 utg47_pilon exonerate:protein2genome:local gene 1446232 1449461 3826 + . gene_id 0 ; sequence GL50803_17285-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1446232 1449461 . + . utg47_pilon exonerate:protein2genome:local exon 1446232 1449461 . + . insertions 0 ; deletions 6 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1446232 1449461 3826 + . alignment_id 0 ; Query GL50803_17285-t26_1-p1 ; Align 1446232 9 777 ; Align 1447009 270 1713 ; Align 1448722 842 33 ; Align 1448755 855 648 ; Align 1449405 1072 57 utg47_pilon exonerate:protein2genome:local gene 1445136 1445789 842 - . gene_id 0 ; sequence GL50803_17286-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1445136 1445789 . - . utg47_pilon exonerate:protein2genome:local exon 1445136 1445789 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1445136 1445789 842 - . alignment_id 0 ; Query GL50803_17286-t26_1-p1 ; Align 1445790 12 654 utg47_pilon exonerate:protein2genome:local gene 1127238 1434103 5449 - . gene_id 0 ; sequence GL50803_17288-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1429450 1434103 . - . utg47_pilon exonerate:protein2genome:local exon 1429450 1434103 . - . insertions 6 ; deletions 5 ; frameshifts 3 utg47_pilon exonerate:protein2genome:local splice5 1429448 1429449 . - . intron_id 1 ; splice_site "TT" utg47_pilon exonerate:protein2genome:local intron 1425928 1429449 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1425928 1425929 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1425608 1425927 . - . utg47_pilon exonerate:protein2genome:local exon 1425608 1425927 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1425606 1425607 . - . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1321618 1425607 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1321618 1321619 . - . intron_id 1 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 1321372 1321617 . - . utg47_pilon exonerate:protein2genome:local exon 1321372 1321617 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1321370 1321371 . - . intron_id 3 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local intron 1288041 1321371 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 1288041 1288042 . - . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1287923 1288040 . - . utg47_pilon exonerate:protein2genome:local exon 1287923 1288040 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1287921 1287922 . - . intron_id 4 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1127375 1287922 . - . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 1127375 1127376 . - . intron_id 3 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1127238 1127374 . - . utg47_pilon exonerate:protein2genome:local exon 1127238 1127374 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1127238 1434103 5449 - . alignment_id 0 ; Query GL50803_17288-t26_1-p1 ; Align 1434104 1 48 ; Align 1434054 17 36 ; Align 1434015 29 942 ; Align 1433072 343 1215 ; Align 1431857 749 75 ; Align 1431782 777 1611 ; Align 1430171 1315 612 ; Align 1429556 1519 105 ; Align 1425926 1555 318 ; Align 1321618 1661 246 ; Align 1288041 1743 117 ; Align 1127373 1783 135 utg47_pilon exonerate:protein2genome:local gene 1395422 1396813 1677 + . gene_id 0 ; sequence GL50803_17291-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1395422 1396813 . + . utg47_pilon exonerate:protein2genome:local exon 1395422 1396813 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1395422 1396813 1677 + . alignment_id 0 ; Query GL50803_17291-t26_1-p1 ; Align 1395422 1 306 ; Align 1395731 103 1083 utg349_pilon exonerate:protein2genome:local gene 491250 492245 1535 + . gene_id 0 ; sequence GL50803_17294-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 491250 492245 . + . utg349_pilon exonerate:protein2genome:local exon 491250 492245 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 491250 492245 1535 + . alignment_id 0 ; Query GL50803_17294-t26_1-p1 ; Align 491250 1 996 utg349_pilon exonerate:protein2genome:local gene 527995 529614 2646 + . gene_id 0 ; sequence GL50803_17296-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 527995 529614 . + . utg349_pilon exonerate:protein2genome:local exon 527995 529614 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 527995 529614 2646 + . alignment_id 0 ; Query GL50803_17296-t26_1-p1 ; Align 527995 1 1620 utg349_pilon exonerate:protein2genome:local gene 555850 557055 1843 + . gene_id 0 ; sequence GL50803_17298-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 555850 557055 . + . utg349_pilon exonerate:protein2genome:local exon 555850 557055 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 555850 557055 1843 + . alignment_id 0 ; Query GL50803_17298-t26_1-p1 ; Align 555850 1 1206 utg349_pilon exonerate:protein2genome:local gene 557905 561456 4519 + . gene_id 0 ; sequence GL50803_17299-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 557905 561456 . + . utg349_pilon exonerate:protein2genome:local exon 557905 561456 . + . insertions 0 ; deletions 0 ; frameshifts 6 utg349_pilon exonerate:protein2genome:local similarity 557905 561456 4519 + . alignment_id 0 ; Query GL50803_17299-t26_1-p1 ; Align 557905 1 2775 ; Align 560685 926 618 ; Align 561304 1132 153 utg349_pilon exonerate:protein2genome:local gene 612320 614671 3691 + . gene_id 0 ; sequence GL50803_17304-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 612320 614671 . + . utg349_pilon exonerate:protein2genome:local exon 612320 614671 . + . insertions 6 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 612320 614671 3691 + . alignment_id 0 ; Query GL50803_17304-t26_1-p1 ; Align 612320 1 2124 ; Align 614444 710 132 ; Align 614582 754 90 utg18_pilon exonerate:protein2genome:local gene 557548 559293 2440 + . gene_id 0 ; sequence GL50803_17305-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 557548 559293 . + . utg18_pilon exonerate:protein2genome:local exon 557548 559293 . + . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 557548 559293 2440 + . alignment_id 0 ; Query GL50803_17305-t26_1-p1 ; Align 557548 1 270 ; Align 557818 92 18 ; Align 557836 99 1458 utg731_pilon exonerate:protein2genome:local gene 670932 672465 2329 - . gene_id 0 ; sequence GL50803_17308-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 670932 672465 . - . utg731_pilon exonerate:protein2genome:local exon 670932 672465 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 670932 672465 2329 - . alignment_id 0 ; Query GL50803_17308-t26_1-p1 ; Align 672466 1 354 ; Align 672111 119 1179 utg731_pilon exonerate:protein2genome:local gene 643024 644986 2601 + . gene_id 0 ; sequence GL50803_17312-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 643024 644986 . + . utg731_pilon exonerate:protein2genome:local exon 643024 644986 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 643024 644986 2601 + . alignment_id 0 ; Query GL50803_17312-t26_1-p1 ; Align 643024 1 1332 ; Align 644356 446 12 ; Align 644369 450 618 utg731_pilon exonerate:protein2genome:local gene 637813 642903 6599 + . gene_id 0 ; sequence GL50803_17313-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 637813 642903 . + . utg731_pilon exonerate:protein2genome:local exon 637813 642903 . + . insertions 3 ; deletions 4 ; frameshifts 3 utg731_pilon exonerate:protein2genome:local similarity 637813 642903 6599 + . alignment_id 0 ; Query GL50803_17313-t26_1-p1 ; Align 637813 5 759 ; Align 638573 258 966 ; Align 639542 580 468 ; Align 640010 737 9 ; Align 640019 742 252 ; Align 640272 827 735 ; Align 641008 1072 1896 utg731_pilon exonerate:protein2genome:local gene 628349 762915 1044 - . gene_id 0 ; sequence GL50803_17314-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 762787 762915 . - . utg731_pilon exonerate:protein2genome:local exon 762787 762915 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 762785 762786 . - . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 646330 762786 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 646330 646331 . - . intron_id 0 ; splice_site "CT" utg731_pilon exonerate:protein2genome:local cds 646183 646329 . - . utg731_pilon exonerate:protein2genome:local exon 646183 646329 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 646181 646182 . - . intron_id 2 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 629372 646182 . - . intron_id 2 utg731_pilon exonerate:protein2genome:local splice3 629372 629373 . - . intron_id 1 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local cds 628349 629371 . - . utg731_pilon exonerate:protein2genome:local exon 628349 629371 . - . insertions 0 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 628349 762915 1044 - . alignment_id 0 ; Query GL50803_17314-t26_1-p1 ; Align 762916 177 129 ; Align 646330 220 147 ; Align 629372 269 276 ; Align 629096 362 186 ; Align 628910 427 561 utg731_pilon exonerate:protein2genome:local gene 630202 632768 2817 + . gene_id 0 ; sequence GL50803_17315-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 630202 632768 . + . utg731_pilon exonerate:protein2genome:local exon 630202 632768 . + . insertions 0 ; deletions 8 ; frameshifts 5 utg731_pilon exonerate:protein2genome:local similarity 630202 632768 2817 + . alignment_id 0 ; Query GL50803_17315-t26_1-p1 ; Align 630202 62 330 ; Align 630534 173 477 ; Align 631011 335 45 ; Align 631056 353 90 ; Align 631148 384 561 ; Align 631710 571 1059 utg731_pilon exonerate:protein2genome:local gene 614096 615754 2541 + . gene_id 0 ; sequence GL50803_17316-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 614096 615754 . + . utg731_pilon exonerate:protein2genome:local exon 614096 615754 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 614096 615754 2541 + . alignment_id 0 ; Query GL50803_17316-t26_1-p1 ; Align 614096 1 1659 utg731_pilon exonerate:protein2genome:local gene 605700 609396 5229 + . gene_id 0 ; sequence GL50803_17318-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 605700 609396 . + . utg731_pilon exonerate:protein2genome:local exon 605700 609396 . + . insertions 9 ; deletions 1 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 605700 609396 5229 + . alignment_id 0 ; Query GL50803_17318-t26_1-p1 ; Align 605700 1 1044 ; Align 606745 349 279 ; Align 607030 442 600 ; Align 607630 643 45 ; Align 607678 658 1719 utg731_pilon exonerate:protein2genome:local gene 482784 553735 2323 + . gene_id 0 ; sequence GL50803_17320-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 482784 482826 . + . utg731_pilon exonerate:protein2genome:local exon 482784 482826 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 482827 482828 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 482827 536943 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 536942 536943 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 536944 537010 . + . utg731_pilon exonerate:protein2genome:local exon 536944 537010 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local splice5 537011 537012 . + . intron_id 2 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 537011 551628 . + . intron_id 2 utg731_pilon exonerate:protein2genome:local splice3 551627 551628 . + . intron_id 1 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 551629 553735 . + . utg731_pilon exonerate:protein2genome:local exon 551629 553735 . + . insertions 6 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 482784 553735 2323 + . alignment_id 0 ; Query GL50803_17320-t26_1-p1 ; Align 482784 236 42 ; Align 536946 251 15 ; Align 536961 257 48 ; Align 551630 274 126 ; Align 551759 316 681 ; Align 552440 545 804 ; Align 553244 814 357 ; Align 553604 933 132 utg64_pilon exonerate:protein2genome:local gene 914629 916584 2835 + . gene_id 0 ; sequence GL50803_17325-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 914629 916584 . + . utg64_pilon exonerate:protein2genome:local exon 914629 916584 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 914629 916584 2835 + . alignment_id 0 ; Query GL50803_17325-t26_1-p1 ; Align 914629 1 1956 utg64_pilon exonerate:protein2genome:local gene 916734 918470 2483 + . gene_id 0 ; sequence GL50803_17326-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 916734 918470 . + . utg64_pilon exonerate:protein2genome:local exon 916734 918470 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 916734 918470 2483 + . alignment_id 0 ; Query GL50803_17326-t26_1-p1 ; Align 916734 1 1737 utg64_pilon exonerate:protein2genome:local gene 918536 919867 2264 - . gene_id 0 ; sequence GL50803_17327-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 918536 919867 . - . utg64_pilon exonerate:protein2genome:local exon 918536 919867 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 918536 919867 2264 - . alignment_id 0 ; Query GL50803_17327-t26_1-p1 ; Align 919868 1 1332 utg64_pilon exonerate:protein2genome:local gene 919922 923818 5312 + . gene_id 0 ; sequence GL50803_17328-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 919922 923818 . + . utg64_pilon exonerate:protein2genome:local exon 919922 923818 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 919922 923818 5312 + . alignment_id 0 ; Query GL50803_17328-t26_1-p1 ; Align 919922 1 3897 utg64_pilon exonerate:protein2genome:local gene 923883 925001 1489 + . gene_id 0 ; sequence GL50803_17329-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 923883 925001 . + . utg64_pilon exonerate:protein2genome:local exon 923883 925001 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 923883 925001 1489 + . alignment_id 0 ; Query GL50803_17329-t26_1-p1 ; Align 923883 1 1092 ; Align 924975 366 27 utg64_pilon exonerate:protein2genome:local gene 931384 931863 740 + . gene_id 0 ; sequence GL50803_17330-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 931384 931863 . + . utg64_pilon exonerate:protein2genome:local exon 931384 931863 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 931384 931863 740 + . alignment_id 0 ; Query GL50803_17330-t26_1-p1 ; Align 931384 1 480 utg64_pilon exonerate:protein2genome:local gene 943016 948001 7672 + . gene_id 0 ; sequence GL50803_17332-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 943016 948001 . + . utg64_pilon exonerate:protein2genome:local exon 943016 948001 . + . insertions 24 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 943016 948001 7672 + . alignment_id 0 ; Query GL50803_17332-t26_1-p1 ; Align 943016 1 4239 ; Align 947258 1414 81 ; Align 947342 1441 33 ; Align 947390 1452 72 ; Align 947465 1476 354 ; Align 947819 1595 162 ; Align 947981 1650 21 utg64_pilon exonerate:protein2genome:local gene 949878 952031 3435 - . gene_id 0 ; sequence GL50803_17333-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 949878 952031 . - . utg64_pilon exonerate:protein2genome:local exon 949878 952031 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 949878 952031 3435 - . alignment_id 0 ; Query GL50803_17333-t26_1-p1 ; Align 952032 1 2154 utg64_pilon exonerate:protein2genome:local gene 956984 959293 3019 + . gene_id 0 ; sequence GL50803_17334-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 956984 959293 . + . utg64_pilon exonerate:protein2genome:local exon 956984 959293 . + . insertions 9 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 956984 959293 3019 + . alignment_id 0 ; Query GL50803_17334-t26_1-p1 ; Align 956984 1 1125 ; Align 958109 377 27 ; Align 958136 387 237 ; Align 958376 466 483 ; Align 958862 627 63 ; Align 958928 648 366 utg64_pilon exonerate:protein2genome:local gene 959419 962115 3293 + . gene_id 0 ; sequence GL50803_17335-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 959419 962115 . + . utg64_pilon exonerate:protein2genome:local exon 959419 962115 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 959419 962115 3293 + . alignment_id 0 ; Query GL50803_17335-t26_1-p1 ; Align 959419 1 1263 ; Align 960685 422 1431 utg64_pilon exonerate:protein2genome:local gene 965158 966159 1246 + . gene_id 0 ; sequence GL50803_17336-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 965158 966159 . + . utg64_pilon exonerate:protein2genome:local exon 965158 966159 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 965158 966159 1246 + . alignment_id 0 ; Query GL50803_17336-t26_1-p1 ; Align 965158 6 1002 utg64_pilon exonerate:protein2genome:local gene 964641 964994 550 - . gene_id 0 ; sequence GL50803_17337-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 964641 964994 . - . utg64_pilon exonerate:protein2genome:local exon 964641 964994 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 964641 964994 550 - . alignment_id 0 ; Query GL50803_17337-t26_1-p1 ; Align 964995 1 354 utg64_pilon exonerate:protein2genome:local gene 985597 986364 1225 + . gene_id 0 ; sequence GL50803_17340-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 985597 986364 . + . utg64_pilon exonerate:protein2genome:local exon 985597 986364 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 985597 986364 1225 + . alignment_id 0 ; Query GL50803_17340-t26_1-p1 ; Align 985597 1 768 utg64_pilon exonerate:protein2genome:local gene 998663 1000639 3061 + . gene_id 0 ; sequence GL50803_17342-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 998663 1000639 . + . utg64_pilon exonerate:protein2genome:local exon 998663 1000639 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 998663 1000639 3061 + . alignment_id 0 ; Query GL50803_17342-t26_1-p1 ; Align 998663 1 1977 utg64_pilon exonerate:protein2genome:local gene 1010850 1011326 731 + . gene_id 0 ; sequence GL50803_17345-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1010850 1011326 . + . utg64_pilon exonerate:protein2genome:local exon 1010850 1011326 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1010850 1011326 731 + . alignment_id 0 ; Query GL50803_17345-t26_1-p1 ; Align 1010850 1 477 utg64_pilon exonerate:protein2genome:local gene 1013414 1014121 817 - . gene_id 0 ; sequence GL50803_17346-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1013414 1014121 . - . utg64_pilon exonerate:protein2genome:local exon 1013414 1014121 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 1013414 1014121 817 - . alignment_id 0 ; Query GL50803_17346-t26_1-p1 ; Align 1014122 1 648 ; Align 1013474 218 60 utg64_pilon exonerate:protein2genome:local gene 1020653 1021270 965 + . gene_id 0 ; sequence GL50803_17347-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1020653 1021270 . + . utg64_pilon exonerate:protein2genome:local exon 1020653 1021270 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1020653 1021270 965 + . alignment_id 0 ; Query GL50803_17347-t26_1-p1 ; Align 1020653 1 618 utg64_pilon exonerate:protein2genome:local gene 1021308 1022567 1947 + . gene_id 0 ; sequence GL50803_17348-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1021308 1022567 . + . utg64_pilon exonerate:protein2genome:local exon 1021308 1022567 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1021308 1022567 1947 + . alignment_id 0 ; Query GL50803_17348-t26_1-p1 ; Align 1021308 1 1260 utg308_pilon exonerate:protein2genome:local gene 311979 312785 1148 + . gene_id 0 ; sequence GL50803_17350-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 311979 312785 . + . utg308_pilon exonerate:protein2genome:local exon 311979 312785 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 311979 312785 1148 + . alignment_id 0 ; Query GL50803_17350-t26_1-p1 ; Align 311979 1 765 ; Align 312744 257 42 utg308_pilon exonerate:protein2genome:local gene 312745 314162 1926 - . gene_id 0 ; sequence GL50803_17351-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 312745 314162 . - . utg308_pilon exonerate:protein2genome:local exon 312745 314162 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 312745 314162 1926 - . alignment_id 0 ; Query GL50803_17351-t26_1-p1 ; Align 314163 1 138 ; Align 314023 48 1278 utg308_pilon exonerate:protein2genome:local gene 310633 311967 1897 - . gene_id 0 ; sequence GL50803_17352-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 310633 311967 . - . utg308_pilon exonerate:protein2genome:local exon 310633 311967 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 310633 311967 1897 - . alignment_id 0 ; Query GL50803_17352-t26_1-p1 ; Align 311968 1 840 ; Align 311128 282 495 utg308_pilon exonerate:protein2genome:local gene 309677 310793 1747 - . gene_id 0 ; sequence GL50803_17353-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 309677 310793 . - . utg308_pilon exonerate:protein2genome:local exon 309677 310793 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 309677 310793 1747 - . alignment_id 0 ; Query GL50803_17353-t26_1-p1 ; Align 310794 3 165 ; Align 310628 58 951 utg308_pilon exonerate:protein2genome:local gene 341885 344359 3453 - . gene_id 0 ; sequence GL50803_17354-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 341885 344359 . - . utg308_pilon exonerate:protein2genome:local exon 341885 344359 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 341885 344359 3453 - . alignment_id 0 ; Query GL50803_17354-t26_1-p1 ; Align 344360 1 2475 utg308_pilon exonerate:protein2genome:local gene 367548 372641 6975 + . gene_id 0 ; sequence GL50803_17362-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 367548 372641 . + . utg308_pilon exonerate:protein2genome:local exon 367548 372641 . + . insertions 0 ; deletions 4 utg308_pilon exonerate:protein2genome:local similarity 367548 372641 6975 + . alignment_id 0 ; Query GL50803_17362-t26_1-p1 ; Align 367548 1 711 ; Align 368259 241 1725 ; Align 369984 817 2658 utg308_pilon exonerate:protein2genome:local gene 387126 387452 588 - . gene_id 0 ; sequence GL50803_17364-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 387126 387452 . - . utg308_pilon exonerate:protein2genome:local exon 387126 387452 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 387126 387452 588 - . alignment_id 0 ; Query GL50803_17364-t26_1-p1 ; Align 387453 1 327 utg308_pilon exonerate:protein2genome:local gene 388472 389407 1397 - . gene_id 0 ; sequence GL50803_17365-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 388472 389407 . - . utg308_pilon exonerate:protein2genome:local exon 388472 389407 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 388472 389407 1397 - . alignment_id 0 ; Query GL50803_17365-t26_1-p1 ; Align 389408 1 936 utg308_pilon exonerate:protein2genome:local gene 387690 388508 1326 + . gene_id 0 ; sequence GL50803_17366-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 387690 388508 . + . utg308_pilon exonerate:protein2genome:local exon 387690 388508 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 387690 388508 1326 + . alignment_id 0 ; Query GL50803_17366-t26_1-p1 ; Align 387690 1 819 utg308_pilon exonerate:protein2genome:local gene 389451 389996 828 + . gene_id 0 ; sequence GL50803_17367-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 389451 389996 . + . utg308_pilon exonerate:protein2genome:local exon 389451 389996 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 389451 389996 828 + . alignment_id 0 ; Query GL50803_17367-t26_1-p1 ; Align 389451 1 546 utg308_pilon exonerate:protein2genome:local gene 391167 398046 10679 - . gene_id 0 ; sequence GL50803_17368-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 391167 398046 . - . utg308_pilon exonerate:protein2genome:local exon 391167 398046 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 391167 398046 10679 - . alignment_id 0 ; Query GL50803_17368-t26_1-p1 ; Align 398047 1 5580 ; Align 392466 1862 1299 utg308_pilon exonerate:protein2genome:local gene 398115 398804 1079 + . gene_id 0 ; sequence GL50803_17369-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 398115 398804 . + . utg308_pilon exonerate:protein2genome:local exon 398115 398804 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 398115 398804 1079 + . alignment_id 0 ; Query GL50803_17369-t26_1-p1 ; Align 398115 1 690 utg308_pilon exonerate:protein2genome:local gene 524499 524870 610 - . gene_id 0 ; sequence GL50803_17371-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 524499 524870 . - . utg308_pilon exonerate:protein2genome:local exon 524499 524870 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 524499 524870 610 - . alignment_id 0 ; Query GL50803_17371-t26_1-p1 ; Align 524871 1 372 utg308_pilon exonerate:protein2genome:local gene 528982 530011 1255 - . gene_id 0 ; sequence GL50803_17374-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 528982 530011 . - . utg308_pilon exonerate:protein2genome:local exon 528982 530011 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 528982 530011 1255 - . alignment_id 0 ; Query GL50803_17374-t26_1-p1 ; Align 530012 1 39 ; Align 529972 14 990 utg308_pilon exonerate:protein2genome:local gene 529999 531084 1638 - . gene_id 0 ; sequence GL50803_17375-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 529999 531084 . - . utg308_pilon exonerate:protein2genome:local exon 529999 531084 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 529999 531084 1638 - . alignment_id 0 ; Query GL50803_17375-t26_1-p1 ; Align 531085 1 1086 utg308_pilon exonerate:protein2genome:local gene 555410 560429 5402 - . gene_id 0 ; sequence GL50803_17378-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 555410 560429 . - . utg308_pilon exonerate:protein2genome:local exon 555410 560429 . - . insertions 3 ; deletions 7 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 555410 560429 5402 - . alignment_id 0 ; Query GL50803_17378-t26_1-p1 ; Align 560430 415 867 ; Align 559563 705 342 ; Align 559218 819 555 ; Align 558662 1004 744 ; Align 557918 1253 612 ; Align 557306 1458 99 ; Align 557207 1494 822 ; Align 556385 1769 975 utg308_pilon exonerate:protein2genome:local gene 565424 568333 3549 + . gene_id 0 ; sequence GL50803_17379-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 565424 568333 . + . utg308_pilon exonerate:protein2genome:local exon 565424 568333 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 565424 568333 3549 + . alignment_id 0 ; Query GL50803_17379-t26_1-p1 ; Align 565424 1 2910 utg308_pilon exonerate:protein2genome:local gene 573194 574723 1933 + . gene_id 0 ; sequence GL50803_17380-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 573194 574723 . + . utg308_pilon exonerate:protein2genome:local exon 573194 574723 . + . insertions 6 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 573194 574723 1933 + . alignment_id 0 ; Query GL50803_17380-t26_1-p1 ; Align 573194 2 744 ; Align 573941 250 399 ; Align 574340 385 279 ; Align 574622 478 102 utg349_pilon exonerate:protein2genome:local gene 1029591 1031849 3080 - . gene_id 0 ; sequence GL50803_17385-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1029591 1031849 . - . utg349_pilon exonerate:protein2genome:local exon 1029591 1031849 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1029591 1031849 3080 - . alignment_id 0 ; Query GL50803_17385-t26_1-p1 ; Align 1031850 1 2259 utg349_pilon exonerate:protein2genome:local gene 1026027 1029497 4752 - . gene_id 0 ; sequence GL50803_17386-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1026027 1029497 . - . utg349_pilon exonerate:protein2genome:local exon 1026027 1029497 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1026027 1029497 4752 - . alignment_id 0 ; Query GL50803_17386-t26_1-p1 ; Align 1029498 1 1401 ; Align 1028097 469 2070 utg349_pilon exonerate:protein2genome:local gene 1021709 1025707 5380 + . gene_id 0 ; sequence GL50803_17387-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1021709 1025707 . + . utg349_pilon exonerate:protein2genome:local exon 1021709 1025707 . + . insertions 0 ; deletions 8 utg349_pilon exonerate:protein2genome:local similarity 1021709 1025707 5380 + . alignment_id 0 ; Query GL50803_17387-t26_1-p1 ; Align 1021709 137 903 ; Align 1022612 443 60 ; Align 1022672 466 3036 utg349_pilon exonerate:protein2genome:local gene 1004321 1007431 4433 + . gene_id 0 ; sequence GL50803_17388-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1004321 1007431 . + . utg349_pilon exonerate:protein2genome:local exon 1004321 1007431 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 1004321 1007431 4433 + . alignment_id 0 ; Query GL50803_17388-t26_1-p1 ; Align 1004321 632 45 ; Align 1004366 649 3066 utg349_pilon exonerate:protein2genome:local gene 999933 1001144 1575 - . gene_id 0 ; sequence GL50803_17389-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 999933 1001144 . - . utg349_pilon exonerate:protein2genome:local exon 999933 1001144 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 999933 1001144 1575 - . alignment_id 0 ; Query GL50803_17389-t26_1-p1 ; Align 1001145 4 789 ; Align 1000353 267 420 utg349_pilon exonerate:protein2genome:local gene 988032 990884 4362 - . gene_id 0 ; sequence GL50803_17390-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 988032 990884 . - . utg349_pilon exonerate:protein2genome:local exon 988032 990884 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 988032 990884 4362 - . alignment_id 0 ; Query GL50803_17390-t26_1-p1 ; Align 990885 1 2478 ; Align 988407 830 375 utg349_pilon exonerate:protein2genome:local gene 975866 977350 2273 - . gene_id 0 ; sequence GL50803_17391-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 975866 977350 . - . utg349_pilon exonerate:protein2genome:local exon 975866 977350 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 975866 977350 2273 - . alignment_id 0 ; Query GL50803_17391-t26_1-p1 ; Align 977351 1 1485 utg349_pilon exonerate:protein2genome:local gene 841786 973900 3422 - . gene_id 0 ; sequence GL50803_17392-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 970654 973900 . - . utg349_pilon exonerate:protein2genome:local exon 970654 973900 . - . insertions 9 ; deletions 2 utg349_pilon exonerate:protein2genome:local splice5 970652 970653 . - . intron_id 1 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local intron 841866 970653 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 841866 841867 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 841786 841865 . - . utg349_pilon exonerate:protein2genome:local exon 841786 841865 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 841786 973900 3422 - . alignment_id 0 ; Query GL50803_17392-t26_1-p1 ; Align 973901 607 615 ; Align 973286 813 990 ; Align 972293 1143 12 ; Align 972275 1147 1302 ; Align 970973 1582 318 ; Align 841864 1689 78 utg349_pilon exonerate:protein2genome:local gene 947366 948355 1480 + . gene_id 0 ; sequence GL50803_17393-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 947366 948355 . + . utg349_pilon exonerate:protein2genome:local exon 947366 948355 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 947366 948355 1480 + . alignment_id 0 ; Query GL50803_17393-t26_1-p1 ; Align 947366 10 990 utg349_pilon exonerate:protein2genome:local gene 897924 898814 1498 + . gene_id 0 ; sequence GL50803_17395-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 897924 898814 . + . utg349_pilon exonerate:protein2genome:local exon 897924 898814 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 897924 898814 1498 + . alignment_id 0 ; Query GL50803_17395-t26_1-p1 ; Align 897924 1 891 utg349_pilon exonerate:protein2genome:local gene 894938 896773 1893 - . gene_id 0 ; sequence GL50803_17396-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 894938 896773 . - . utg349_pilon exonerate:protein2genome:local exon 894938 896773 . - . insertions 3 ; deletions 11 utg349_pilon exonerate:protein2genome:local similarity 894938 896773 1893 - . alignment_id 0 ; Query GL50803_17396-t26_1-p1 ; Align 896774 1 300 ; Align 896474 102 54 ; Align 896420 121 135 ; Align 896285 167 657 ; Align 895628 389 297 ; Align 895328 488 162 ; Align 895166 543 12 ; Align 895154 551 216 utg349_pilon exonerate:protein2genome:local gene 1387429 1388370 1603 - . gene_id 0 ; sequence GL50803_17400-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1387429 1388370 . - . utg349_pilon exonerate:protein2genome:local exon 1387429 1388370 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1387429 1388370 1603 - . alignment_id 0 ; Query GL50803_17400-t26_1-p1 ; Align 1388371 1 942 utg349_pilon exonerate:protein2genome:local gene 1366448 1370554 4342 - . gene_id 0 ; sequence GL50803_17401-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1369484 1370554 . - . utg349_pilon exonerate:protein2genome:local exon 1369484 1370554 . - . insertions 6 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1369482 1369483 . - . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1369433 1369483 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1369433 1369434 . - . intron_id 0 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local cds 1366448 1369432 . - . utg349_pilon exonerate:protein2genome:local exon 1366448 1369432 . - . insertions 12 ; deletions 14 utg349_pilon exonerate:protein2genome:local similarity 1366448 1370554 4342 - . alignment_id 0 ; Query GL50803_17401-t26_1-p1 ; Align 1370555 1 984 ; Align 1369565 329 81 ; Align 1369433 356 153 ; Align 1369280 410 156 ; Align 1369124 464 222 ; Align 1368902 541 12 ; Align 1368890 546 1458 ; Align 1367429 1032 129 ; Align 1367291 1075 507 ; Align 1366784 1246 156 ; Align 1366628 1299 33 ; Align 1366595 1312 147 utg349_pilon exonerate:protein2genome:local gene 1361821 1363401 2277 - . gene_id 0 ; sequence GL50803_17402-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1361821 1363401 . - . utg349_pilon exonerate:protein2genome:local exon 1361821 1363401 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1361821 1363401 2277 - . alignment_id 0 ; Query GL50803_17402-t26_1-p1 ; Align 1363402 470 1581 utg349_pilon exonerate:protein2genome:local gene 1356972 1361696 7139 - . gene_id 0 ; sequence GL50803_17403-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1356972 1361696 . - . utg349_pilon exonerate:protein2genome:local exon 1356972 1361696 . - . insertions 9 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 1356972 1361696 7139 - . alignment_id 0 ; Query GL50803_17403-t26_1-p1 ; Align 1361697 1 726 ; Align 1360971 245 3441 ; Align 1357530 1393 81 ; Align 1357449 1421 93 ; Align 1357347 1452 375 utg349_pilon exonerate:protein2genome:local gene 1350533 1352317 2424 + . gene_id 0 ; sequence GL50803_17404-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1350533 1352317 . + . utg349_pilon exonerate:protein2genome:local exon 1350533 1352317 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 1350533 1352317 2424 + . alignment_id 0 ; Query GL50803_17404-t26_1-p1 ; Align 1350533 1 642 ; Align 1351175 216 780 ; Align 1351955 477 363 utg349_pilon exonerate:protein2genome:local gene 1244296 1350340 1675 - . gene_id 0 ; sequence GL50803_17405-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1349125 1350340 . - . utg349_pilon exonerate:protein2genome:local exon 1349125 1350340 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1349123 1349124 . - . intron_id 1 ; splice_site "TT" utg349_pilon exonerate:protein2genome:local intron 1269755 1349124 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1269755 1269756 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1269696 1269754 . - . utg349_pilon exonerate:protein2genome:local exon 1269696 1269754 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1269694 1269695 . - . intron_id 2 ; splice_site "TT" utg349_pilon exonerate:protein2genome:local intron 1244332 1269695 . - . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1244332 1244333 . - . intron_id 1 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1244296 1244331 . - . utg349_pilon exonerate:protein2genome:local exon 1244296 1244331 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1244296 1350340 1675 - . alignment_id 0 ; Query GL50803_17405-t26_1-p1 ; Align 1350341 1 1215 ; Align 1269753 407 57 ; Align 1244332 426 36 utg349_pilon exonerate:protein2genome:local gene 1340830 1343631 3842 + . gene_id 0 ; sequence GL50803_17406-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1340830 1343631 . + . utg349_pilon exonerate:protein2genome:local exon 1340830 1343631 . + . insertions 9 ; deletions 8 utg349_pilon exonerate:protein2genome:local similarity 1340830 1343631 3842 + . alignment_id 0 ; Query GL50803_17406-t26_1-p1 ; Align 1340830 700 165 ; Align 1340995 756 45 ; Align 1341040 775 117 ; Align 1341157 815 432 ; Align 1341592 959 321 ; Align 1341916 1066 705 ; Align 1342624 1301 159 ; Align 1342783 1355 99 ; Align 1342882 1389 750 utg349_pilon exonerate:protein2genome:local gene 1333486 1334322 849 + . gene_id 0 ; sequence GL50803_17407-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1333486 1334322 . + . utg349_pilon exonerate:protein2genome:local exon 1333486 1334322 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1333486 1334322 849 + . alignment_id 0 ; Query GL50803_17407-t26_1-p1 ; Align 1333486 35 60 ; Align 1333549 55 774 utg349_pilon exonerate:protein2genome:local gene 1317947 1321345 4114 - . gene_id 0 ; sequence GL50803_17408-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1317947 1321345 . - . utg349_pilon exonerate:protein2genome:local exon 1317947 1321345 . - . insertions 6 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1317947 1321345 4114 - . alignment_id 0 ; Query GL50803_17408-t26_1-p1 ; Align 1321346 1 555 ; Align 1320788 186 804 ; Align 1319981 454 2034 utg349_pilon exonerate:protein2genome:local gene 1309886 1311589 2636 - . gene_id 0 ; sequence GL50803_17411-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1309886 1311589 . - . utg349_pilon exonerate:protein2genome:local exon 1309886 1311589 . - . insertions 12 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1309886 1311589 2636 - . alignment_id 0 ; Query GL50803_17411-t26_1-p1 ; Align 1311590 1 639 ; Align 1310939 214 1053 utg349_pilon exonerate:protein2genome:local gene 1306412 1308598 3079 - . gene_id 0 ; sequence GL50803_17412-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1306412 1308598 . - . utg349_pilon exonerate:protein2genome:local exon 1306412 1308598 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1306412 1308598 3079 - . alignment_id 0 ; Query GL50803_17412-t26_1-p1 ; Align 1308599 1 2187 utg349_pilon exonerate:protein2genome:local gene 1293722 1441793 2773 + . gene_id 0 ; sequence GL50803_17413-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1293722 1295766 . + . utg349_pilon exonerate:protein2genome:local exon 1293722 1295766 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1295767 1295768 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1295767 1441633 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1441632 1441633 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1441634 1441793 . + . utg349_pilon exonerate:protein2genome:local exon 1441634 1441793 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1293722 1441793 2773 + . alignment_id 0 ; Query GL50803_17413-t26_1-p1 ; Align 1293722 1 846 ; Align 1294571 283 1194 ; Align 1441635 682 159 utg308_pilon exonerate:protein2genome:local gene 210118 212190 3166 + . gene_id 0 ; sequence GL50803_17417-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 210118 212190 . + . utg308_pilon exonerate:protein2genome:local exon 210118 212190 . + . insertions 0 ; deletions 4 utg308_pilon exonerate:protein2genome:local similarity 210118 212190 3166 + . alignment_id 0 ; Query GL50803_17417-t26_1-p1 ; Align 210118 1 300 ; Align 210418 104 123 ; Align 210541 146 1650 utg308_pilon exonerate:protein2genome:local gene 201289 202476 1800 - . gene_id 0 ; sequence GL50803_17420-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 201289 202476 . - . utg308_pilon exonerate:protein2genome:local exon 201289 202476 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 201289 202476 1800 - . alignment_id 0 ; Query GL50803_17420-t26_1-p1 ; Align 202477 1 1188 utg308_pilon exonerate:protein2genome:local gene 194575 195903 1671 - . gene_id 0 ; sequence GL50803_17421-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 194575 195903 . - . utg308_pilon exonerate:protein2genome:local exon 194575 195903 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 194575 195903 1671 - . alignment_id 0 ; Query GL50803_17421-t26_1-p1 ; Align 195904 1 1329 utg308_pilon exonerate:protein2genome:local gene 161240 161884 969 + . gene_id 0 ; sequence GL50803_17422-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 161240 161884 . + . utg308_pilon exonerate:protein2genome:local exon 161240 161884 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 161240 161884 969 + . alignment_id 0 ; Query GL50803_17422-t26_1-p1 ; Align 161240 1 645 utg308_pilon exonerate:protein2genome:local gene 152520 153752 1399 - . gene_id 0 ; sequence GL50803_17426-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 152520 153752 . - . utg308_pilon exonerate:protein2genome:local exon 152520 153752 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 152520 153752 1399 - . alignment_id 0 ; Query GL50803_17426-t26_1-p1 ; Align 153753 6 1233 utg30034_pilon exonerate:protein2genome:local gene 13693 14745 1472 + . gene_id 0 ; sequence GL50803_17427-t26_1-p1 ; gene_orientation . utg30034_pilon exonerate:protein2genome:local cds 13693 14745 . + . utg30034_pilon exonerate:protein2genome:local exon 13693 14745 . + . insertions 0 ; deletions 0 utg30034_pilon exonerate:protein2genome:local similarity 13693 14745 1472 + . alignment_id 0 ; Query GL50803_17427-t26_1-p1 ; Align 13693 1 1053 utg308_pilon exonerate:protein2genome:local gene 126199 129168 4174 - . gene_id 0 ; sequence GL50803_17429-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 126199 129168 . - . utg308_pilon exonerate:protein2genome:local exon 126199 129168 . - . insertions 21 ; deletions 1 ; frameshifts 3 utg308_pilon exonerate:protein2genome:local similarity 126199 129168 4174 - . alignment_id 0 ; Query GL50803_17429-t26_1-p1 ; Align 129169 3 39 ; Align 129127 16 21 ; Align 129105 23 399 ; Align 128703 156 93 ; Align 128607 187 924 ; Align 127681 496 207 ; Align 127462 565 1263 utg308_pilon exonerate:protein2genome:local gene 120152 123649 5369 - . gene_id 0 ; sequence GL50803_17430-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 120152 123649 . - . utg308_pilon exonerate:protein2genome:local exon 120152 123649 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 120152 123649 5369 - . alignment_id 0 ; Query GL50803_17430-t26_1-p1 ; Align 123650 1 3354 ; Align 120293 1119 141 utg308_pilon exonerate:protein2genome:local gene 108064 110670 3341 + . gene_id 0 ; sequence GL50803_17431-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 108064 110670 . + . utg308_pilon exonerate:protein2genome:local exon 108064 110670 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 108064 110670 3341 + . alignment_id 0 ; Query GL50803_17431-t26_1-p1 ; Align 108064 1316 1380 ; Align 109444 1777 1227 utg308_pilon exonerate:protein2genome:local gene 67283 71002 5390 + . gene_id 0 ; sequence GL50803_17432-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 67283 71002 . + . utg308_pilon exonerate:protein2genome:local exon 67283 71002 . + . insertions 3 ; deletions 4 utg308_pilon exonerate:protein2genome:local similarity 67283 71002 5390 + . alignment_id 0 ; Query GL50803_17432-t26_1-p1 ; Align 67283 1 1539 ; Align 68822 517 120 ; Align 68945 557 294 ; Align 69239 656 1764 utg308_pilon exonerate:protein2genome:local gene 58593 59267 909 + . gene_id 0 ; sequence GL50803_17434-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 58593 59267 . + . utg308_pilon exonerate:protein2genome:local exon 58593 59267 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 58593 59267 909 + . alignment_id 0 ; Query GL50803_17434-t26_1-p1 ; Align 58593 1 675 utg308_pilon exonerate:protein2genome:local gene 51272 52726 1354 - . gene_id 0 ; sequence GL50803_17435-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 51272 52726 . - . utg308_pilon exonerate:protein2genome:local exon 51272 52726 . - . insertions 6 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 51272 52726 1354 - . alignment_id 0 ; Query GL50803_17435-t26_1-p1 ; Align 52727 1 144 ; Align 52583 50 285 ; Align 52298 146 96 ; Align 52196 178 924 utg308_pilon exonerate:protein2genome:local gene 21552 24077 2717 - . gene_id 0 ; sequence GL50803_17438-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 21552 24077 . - . utg308_pilon exonerate:protein2genome:local exon 21552 24077 . - . insertions 3 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 21552 24077 2717 - . alignment_id 0 ; Query GL50803_17438-t26_1-p1 ; Align 24078 1 2094 ; Align 21981 699 60 ; Align 21921 721 369 utg308_pilon exonerate:protein2genome:local gene 9745 15471 6541 - . gene_id 0 ; sequence GL50803_17439-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 9745 15471 . - . utg308_pilon exonerate:protein2genome:local exon 9745 15471 . - . insertions 0 ; deletions 9 utg308_pilon exonerate:protein2genome:local similarity 9745 15471 6541 - . alignment_id 0 ; Query GL50803_17439-t26_1-p1 ; Align 15472 1 186 ; Align 15286 66 735 ; Align 14551 312 2700 ; Align 11851 1214 1848 ; Align 10003 1833 258 utg308_pilon exonerate:protein2genome:local gene 6073 6777 699 + . gene_id 0 ; sequence GL50803_17440-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 6073 6777 . + . utg308_pilon exonerate:protein2genome:local exon 6073 6777 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 6073 6777 699 + . alignment_id 0 ; Query GL50803_17440-t26_1-p1 ; Align 6073 45 705 utg47_pilon exonerate:protein2genome:local gene 269479 270426 1000 + . gene_id 0 ; sequence GL50803_17446-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 269479 270426 . + . utg47_pilon exonerate:protein2genome:local exon 269479 270426 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 269479 270426 1000 + . alignment_id 0 ; Query GL50803_17446-t26_1-p1 ; Align 269479 6 948 utg47_pilon exonerate:protein2genome:local gene 271163 273742 3076 - . gene_id 0 ; sequence GL50803_17447-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 271163 273742 . - . utg47_pilon exonerate:protein2genome:local exon 271163 273742 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 271163 273742 3076 - . alignment_id 0 ; Query GL50803_17447-t26_1-p1 ; Align 273743 1 708 ; Align 273035 238 1431 ; Align 271604 717 441 utg47_pilon exonerate:protein2genome:local gene 258236 262114 6538 - . gene_id 0 ; sequence GL50803_17448-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 258236 262114 . - . utg47_pilon exonerate:protein2genome:local exon 258236 262114 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 258236 262114 6538 - . alignment_id 0 ; Query GL50803_17448-t26_1-p1 ; Align 262115 1 3879 utg47_pilon exonerate:protein2genome:local gene 256862 258163 1992 - . gene_id 0 ; sequence GL50803_17449-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 256862 258163 . - . utg47_pilon exonerate:protein2genome:local exon 256862 258163 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 256862 258163 1992 - . alignment_id 0 ; Query GL50803_17449-t26_1-p1 ; Align 258164 1 1302 utg47_pilon exonerate:protein2genome:local gene 249539 250291 1224 - . gene_id 0 ; sequence GL50803_17451-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 249539 250291 . - . utg47_pilon exonerate:protein2genome:local exon 249539 250291 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 249539 250291 1224 - . alignment_id 0 ; Query GL50803_17451-t26_1-p1 ; Align 250292 1 753 utg47_pilon exonerate:protein2genome:local gene 245909 247957 2289 - . gene_id 0 ; sequence GL50803_17453-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 246646 247957 . - . utg47_pilon exonerate:protein2genome:local exon 246646 247957 . - . insertions 9 ; deletions 6 utg47_pilon exonerate:protein2genome:local splice5 246644 246645 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 246613 246645 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 246613 246614 . - . intron_id 0 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 245909 246612 . - . utg47_pilon exonerate:protein2genome:local exon 245909 246612 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 245909 247957 2289 - . alignment_id 0 ; Query GL50803_17453-t26_1-p1 ; Align 247958 1 849 ; Align 247109 285 15 ; Align 247094 293 54 ; Align 247040 313 150 ; Align 246881 363 234 ; Align 246611 442 702 utg47_pilon exonerate:protein2genome:local gene 244841 245800 1422 - . gene_id 0 ; sequence GL50803_17454-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 244841 245800 . - . utg47_pilon exonerate:protein2genome:local exon 244841 245800 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 244841 245800 1422 - . alignment_id 0 ; Query GL50803_17454-t26_1-p1 ; Align 245801 1 960 utg47_pilon exonerate:protein2genome:local gene 204539 205933 2227 + . gene_id 0 ; sequence GL50803_17460-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 204539 205933 . + . utg47_pilon exonerate:protein2genome:local exon 204539 205933 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 204539 205933 2227 + . alignment_id 0 ; Query GL50803_17460-t26_1-p1 ; Align 204539 1 1395 utg47_pilon exonerate:protein2genome:local gene 200283 203549 4661 + . gene_id 0 ; sequence GL50803_17461-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 200283 203549 . + . utg47_pilon exonerate:protein2genome:local exon 200283 203549 . + . insertions 0 ; deletions 8 utg47_pilon exonerate:protein2genome:local similarity 200283 203549 4661 + . alignment_id 0 ; Query GL50803_17461-t26_1-p1 ; Align 200283 1 432 ; Align 200715 146 714 ; Align 201429 385 12 ; Align 201441 390 228 ; Align 201669 471 1881 utg47_pilon exonerate:protein2genome:local gene 164982 165592 755 - . gene_id 0 ; sequence GL50803_17464-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 164982 165592 . - . utg47_pilon exonerate:protein2genome:local exon 164982 165592 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 164982 165592 755 - . alignment_id 0 ; Query GL50803_17464-t26_1-p1 ; Align 165593 1 105 ; Align 165486 37 504 utg47_pilon exonerate:protein2genome:local gene 157039 161337 5942 + . gene_id 0 ; sequence GL50803_17465-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 157039 161337 . + . utg47_pilon exonerate:protein2genome:local exon 157039 161337 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 157039 161337 5942 + . alignment_id 0 ; Query GL50803_17465-t26_1-p1 ; Align 157039 1 2232 ; Align 159271 746 2067 utg47_pilon exonerate:protein2genome:local gene 144771 145727 1416 + . gene_id 0 ; sequence GL50803_17468-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 144771 145727 . + . utg47_pilon exonerate:protein2genome:local exon 144771 145727 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 144771 145727 1416 + . alignment_id 0 ; Query GL50803_17468-t26_1-p1 ; Align 144771 12 60 ; Align 144834 32 894 utg47_pilon exonerate:protein2genome:local gene 103970 107659 4663 - . gene_id 0 ; sequence GL50803_17471-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 103970 107659 . - . utg47_pilon exonerate:protein2genome:local exon 103970 107659 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 103970 107659 4663 - . alignment_id 0 ; Query GL50803_17471-t26_1-p1 ; Align 107660 1 2520 ; Align 105137 841 1167 utg47_pilon exonerate:protein2genome:local gene 102534 103943 1863 - . gene_id 0 ; sequence GL50803_17472-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 102534 103943 . - . utg47_pilon exonerate:protein2genome:local exon 102534 103943 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 102534 103943 1863 - . alignment_id 0 ; Query GL50803_17472-t26_1-p1 ; Align 103944 15 1410 utg11_pilon exonerate:protein2genome:local gene 1643026 1644852 2560 + . gene_id 0 ; sequence GL50803_17474-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1643026 1644852 . + . utg11_pilon exonerate:protein2genome:local exon 1643026 1644852 . + . insertions 12 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1643026 1644852 2560 + . alignment_id 0 ; Query GL50803_17474-t26_1-p1 ; Align 1643026 1 549 ; Align 1643587 184 1266 utg11_pilon exonerate:protein2genome:local gene 1652276 1658770 8844 + . gene_id 0 ; sequence GL50803_17476-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1652276 1658770 . + . utg11_pilon exonerate:protein2genome:local exon 1652276 1658770 . + . insertions 6 ; deletions 6 utg11_pilon exonerate:protein2genome:local similarity 1652276 1658770 8844 + . alignment_id 0 ; Query GL50803_17476-t26_1-p1 ; Align 1652276 1 1341 ; Align 1653620 448 96 ; Align 1653716 481 48 ; Align 1653767 497 2445 ; Align 1656212 1314 369 ; Align 1656581 1438 369 ; Align 1656950 1563 1821 utg11_pilon exonerate:protein2genome:local gene 1674452 1780118 12339 + . gene_id 0 ; sequence GL50803_17478-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1674452 1684217 . + . utg11_pilon exonerate:protein2genome:local exon 1674452 1684217 . + . insertions 9 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1684218 1684219 . + . intron_id 1 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local intron 1684218 1780080 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1780079 1780080 . + . intron_id 0 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local cds 1780081 1780118 . + . utg11_pilon exonerate:protein2genome:local exon 1780081 1780118 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1674452 1780118 12339 + . alignment_id 0 ; Query GL50803_17478-t26_1-p1 ; Align 1674452 1 7986 ; Align 1682441 2663 822 ; Align 1683269 2937 948 ; Align 1780083 3254 36 utg11_pilon exonerate:protein2genome:local gene 1695268 1696423 1389 - . gene_id 0 ; sequence GL50803_17480-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1695268 1696423 . - . utg11_pilon exonerate:protein2genome:local exon 1695268 1696423 . - . insertions 0 ; deletions 2 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 1695268 1696423 1389 - . alignment_id 0 ; Query GL50803_17480-t26_1-p1 ; Align 1696424 1 927 ; Align 1695497 311 195 ; Align 1695302 377 12 ; Align 1695289 381 21 utg11_pilon exonerate:protein2genome:local gene 1697070 1698623 2472 + . gene_id 0 ; sequence GL50803_17482-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1697070 1698623 . + . utg11_pilon exonerate:protein2genome:local exon 1697070 1698623 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1697070 1698623 2472 + . alignment_id 0 ; Query GL50803_17482-t26_1-p1 ; Align 1697070 1 1059 ; Align 1698132 354 492 utg11_pilon exonerate:protein2genome:local gene 1699506 1700492 1675 - . gene_id 0 ; sequence GL50803_17483-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1699506 1700492 . - . utg11_pilon exonerate:protein2genome:local exon 1699506 1700492 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1699506 1700492 1675 - . alignment_id 0 ; Query GL50803_17483-t26_1-p1 ; Align 1700493 1 987 utg11_pilon exonerate:protein2genome:local gene 1706475 1708634 3473 + . gene_id 0 ; sequence GL50803_17484-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1706475 1708634 . + . utg11_pilon exonerate:protein2genome:local exon 1706475 1708634 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1706475 1708634 3473 + . alignment_id 0 ; Query GL50803_17484-t26_1-p1 ; Align 1706475 1 2160 utg11_pilon exonerate:protein2genome:local gene 1738007 1739650 2138 - . gene_id 0 ; sequence GL50803_17492-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1738007 1739650 . - . utg11_pilon exonerate:protein2genome:local exon 1738007 1739650 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1738007 1739650 2138 - . alignment_id 0 ; Query GL50803_17492-t26_1-p1 ; Align 1739651 1 1644 utg11_pilon exonerate:protein2genome:local gene 1782053 1782994 1151 + . gene_id 0 ; sequence GL50803_17494-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1782053 1782994 . + . utg11_pilon exonerate:protein2genome:local exon 1782053 1782994 . + . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1782053 1782994 1151 + . alignment_id 0 ; Query GL50803_17494-t26_1-p1 ; Align 1782053 1 411 ; Align 1782467 138 354 ; Align 1782821 257 174 utg11_pilon exonerate:protein2genome:local gene 1783016 1787164 4127 + . gene_id 0 ; sequence GL50803_17495-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1783016 1787164 . + . utg11_pilon exonerate:protein2genome:local exon 1783016 1787164 . + . insertions 3 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 1783016 1787164 4127 + . alignment_id 0 ; Query GL50803_17495-t26_1-p1 ; Align 1783016 1 345 ; Align 1783361 121 2991 ; Align 1786355 1118 810 utg18_pilon exonerate:protein2genome:local gene 463174 465394 2569 - . gene_id 0 ; sequence GL50803_17497-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 463174 465394 . - . utg18_pilon exonerate:protein2genome:local exon 463174 465394 . - . insertions 3 ; deletions 1 ; frameshifts 1 utg18_pilon exonerate:protein2genome:local similarity 463174 465394 2569 - . alignment_id 0 ; Query GL50803_17497-t26_1-p1 ; Align 465395 9 1635 ; Align 463760 555 6 ; Align 463753 557 471 ; Align 463279 714 105 utg18_pilon exonerate:protein2genome:local gene 487018 489651 3279 + . gene_id 0 ; sequence GL50803_17498-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 487018 489651 . + . utg18_pilon exonerate:protein2genome:local exon 487018 489651 . + . insertions 0 ; deletions 6 utg18_pilon exonerate:protein2genome:local similarity 487018 489651 3279 + . alignment_id 0 ; Query GL50803_17498-t26_1-p1 ; Align 487018 1 2118 ; Align 489136 711 324 ; Align 489460 821 192 utg18_pilon exonerate:protein2genome:local gene 489682 490563 1197 + . gene_id 0 ; sequence GL50803_17499-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 489682 490563 . + . utg18_pilon exonerate:protein2genome:local exon 489682 490563 . + . insertions 0 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 489682 490563 1197 + . alignment_id 0 ; Query GL50803_17499-t26_1-p1 ; Align 489682 1 123 ; Align 489805 43 759 utg64_pilon exonerate:protein2genome:local gene 262134 263057 874 + . gene_id 0 ; sequence GL50803_17501-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 262134 263057 . + . utg64_pilon exonerate:protein2genome:local exon 262134 263057 . + . insertions 3 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 262134 263057 874 + . alignment_id 0 ; Query GL50803_17501-t26_1-p1 ; Align 262134 1 732 ; Align 262869 245 36 ; Align 262905 258 57 ; Align 262962 279 96 utg64_pilon exonerate:protein2genome:local gene 257409 258581 1457 - . gene_id 0 ; sequence GL50803_17502-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 257409 258581 . - . utg64_pilon exonerate:protein2genome:local exon 257409 258581 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 257409 258581 1457 - . alignment_id 0 ; Query GL50803_17502-t26_1-p1 ; Align 258582 264 1173 utg64_pilon exonerate:protein2genome:local gene 217470 219132 2659 + . gene_id 0 ; sequence GL50803_17505-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 217470 219132 . + . utg64_pilon exonerate:protein2genome:local exon 217470 219132 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 217470 219132 2659 + . alignment_id 0 ; Query GL50803_17505-t26_1-p1 ; Align 217470 1 324 ; Align 217795 109 1338 utg64_pilon exonerate:protein2genome:local gene 186722 188548 2248 - . gene_id 0 ; sequence GL50803_17506-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 186722 188548 . - . utg64_pilon exonerate:protein2genome:local exon 186722 188548 . - . insertions 6 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 186722 188548 2248 - . alignment_id 0 ; Query GL50803_17506-t26_1-p1 ; Align 188549 1 984 ; Align 187565 330 501 ; Align 187058 497 51 ; Align 187007 515 285 utg64_pilon exonerate:protein2genome:local gene 185074 186699 1735 - . gene_id 0 ; sequence GL50803_17507-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 185074 186699 . - . utg64_pilon exonerate:protein2genome:local exon 185074 186699 . - . insertions 0 ; deletions 9 utg64_pilon exonerate:protein2genome:local similarity 185074 186699 1735 - . alignment_id 0 ; Query GL50803_17507-t26_1-p1 ; Align 186700 1 678 ; Align 186022 232 870 ; Align 185152 526 78 utg64_pilon exonerate:protein2genome:local gene 169170 171485 3339 - . gene_id 0 ; sequence GL50803_17508-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 169170 171485 . - . utg64_pilon exonerate:protein2genome:local exon 169170 171485 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 169170 171485 3339 - . alignment_id 0 ; Query GL50803_17508-t26_1-p1 ; Align 171486 1 2316 utg731_pilon exonerate:protein2genome:local gene 898077 1347795 1270 - . gene_id 0 ; sequence GL50803_17510-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1347516 1347795 . - . utg731_pilon exonerate:protein2genome:local exon 1347516 1347795 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1347514 1347515 . - . intron_id 1 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local intron 1174333 1347515 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1174333 1174334 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1173791 1174332 . - . utg731_pilon exonerate:protein2genome:local exon 1173791 1174332 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1173789 1173790 . - . intron_id 2 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1113987 1173790 . - . intron_id 2 utg731_pilon exonerate:protein2genome:local splice3 1113987 1113988 . - . intron_id 1 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1113128 1113986 . - . utg731_pilon exonerate:protein2genome:local exon 1113128 1113986 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local splice5 1113126 1113127 . - . intron_id 3 ; splice_site "GG" utg731_pilon exonerate:protein2genome:local intron 1098074 1113127 . - . intron_id 3 utg731_pilon exonerate:protein2genome:local splice3 1098074 1098075 . - . intron_id 2 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1097839 1098073 . - . utg731_pilon exonerate:protein2genome:local exon 1097839 1098073 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1097837 1097838 . - . intron_id 4 ; splice_site "GG" utg731_pilon exonerate:protein2genome:local intron 898159 1097838 . - . intron_id 4 utg731_pilon exonerate:protein2genome:local splice3 898159 898160 . - . intron_id 3 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 898077 898158 . - . utg731_pilon exonerate:protein2genome:local exon 898077 898158 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 898077 1347795 1270 - . alignment_id 0 ; Query GL50803_17510-t26_1-p1 ; Align 1347796 14 279 ; Align 1174331 108 258 ; Align 1174070 194 279 ; Align 1113987 287 477 ; Align 1113510 447 183 ; Align 1113327 509 198 ; Align 1098072 576 231 ; Align 898158 654 81 utg64_pilon exonerate:protein2genome:local gene 123381 124811 1750 + . gene_id 0 ; sequence GL50803_17515-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 123381 124811 . + . utg64_pilon exonerate:protein2genome:local exon 123381 124811 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 123381 124811 1750 + . alignment_id 0 ; Query GL50803_17515-t26_1-p1 ; Align 123381 1 1431 utg64_pilon exonerate:protein2genome:local gene 68084 69010 1232 - . gene_id 0 ; sequence GL50803_17516-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 68084 69010 . - . utg64_pilon exonerate:protein2genome:local exon 68084 69010 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 68084 69010 1232 - . alignment_id 0 ; Query GL50803_17516-t26_1-p1 ; Align 69011 1 528 ; Align 68480 177 396 utg64_pilon exonerate:protein2genome:local gene 50196 56204 8545 - . gene_id 0 ; sequence GL50803_17518-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 50196 56204 . - . utg64_pilon exonerate:protein2genome:local exon 50196 56204 . - . insertions 0 ; deletions 12 utg64_pilon exonerate:protein2genome:local similarity 50196 56204 8545 - . alignment_id 0 ; Query GL50803_17518-t26_1-p1 ; Align 56205 1 1197 ; Align 55008 404 423 ; Align 54585 546 33 ; Align 54552 559 1563 ; Align 52989 1081 2190 ; Align 50799 1812 123 ; Align 50676 1856 480 utg64_pilon exonerate:protein2genome:local gene 26011 28656 4181 - . gene_id 0 ; sequence GL50803_17520-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 26011 28656 . - . utg64_pilon exonerate:protein2genome:local exon 26011 28656 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 26011 28656 4181 - . alignment_id 0 ; Query GL50803_17520-t26_1-p1 ; Align 28657 1 2646 utg265_pilon exonerate:protein2genome:local gene 751079 751588 770 + . gene_id 0 ; sequence GL50803_17524-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 751079 751588 . + . utg265_pilon exonerate:protein2genome:local exon 751079 751588 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 751079 751588 770 + . alignment_id 0 ; Query GL50803_17524-t26_1-p1 ; Align 751079 1 510 utg265_pilon exonerate:protein2genome:local gene 739720 745437 8389 + . gene_id 0 ; sequence GL50803_17527-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 739720 745437 . + . utg265_pilon exonerate:protein2genome:local exon 739720 745437 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 739720 745437 8389 + . alignment_id 0 ; Query GL50803_17527-t26_1-p1 ; Align 739720 1 5718 utg265_pilon exonerate:protein2genome:local gene 732289 733302 1243 + . gene_id 0 ; sequence GL50803_17529-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 732289 733302 . + . utg265_pilon exonerate:protein2genome:local exon 732289 733302 . + . insertions 0 ; deletions 3 ; frameshifts 6 utg265_pilon exonerate:protein2genome:local similarity 732289 733302 1243 + . alignment_id 0 ; Query GL50803_17529-t26_1-p1 ; Align 732289 1 36 ; Align 732330 13 72 ; Align 732403 37 804 ; Align 733207 308 96 utg265_pilon exonerate:protein2genome:local gene 727819 728973 1559 - . gene_id 0 ; sequence GL50803_17530-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 727819 728973 . - . utg265_pilon exonerate:protein2genome:local exon 727819 728973 . - . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 727819 728973 1559 - . alignment_id 0 ; Query GL50803_17530-t26_1-p1 ; Align 728974 1 336 ; Align 728638 115 819 utg265_pilon exonerate:protein2genome:local gene 725897 727021 1401 + . gene_id 0 ; sequence GL50803_17531-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 725897 727021 . + . utg265_pilon exonerate:protein2genome:local exon 725897 727021 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 725897 727021 1401 + . alignment_id 0 ; Query GL50803_17531-t26_1-p1 ; Align 725897 97 1125 utg265_pilon exonerate:protein2genome:local gene 708363 710132 2531 + . gene_id 0 ; sequence GL50803_17532-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 708363 710132 . + . utg265_pilon exonerate:protein2genome:local exon 708363 710132 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 708363 710132 2531 + . alignment_id 0 ; Query GL50803_17532-t26_1-p1 ; Align 708363 1 1770 utg265_pilon exonerate:protein2genome:local gene 1059657 1060961 1836 - . gene_id 0 ; sequence GL50803_17536-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1059657 1060961 . - . utg265_pilon exonerate:protein2genome:local exon 1059657 1060961 . - . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1059657 1060961 1836 - . alignment_id 0 ; Query GL50803_17536-t26_1-p1 ; Align 1060962 1 1113 ; Align 1059843 372 186 utg265_pilon exonerate:protein2genome:local gene 1050757 1053042 3497 + . gene_id 0 ; sequence GL50803_17538-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1050757 1053042 . + . utg265_pilon exonerate:protein2genome:local exon 1050757 1053042 . + . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 1050757 1053042 3497 + . alignment_id 0 ; Query GL50803_17538-t26_1-p1 ; Align 1050757 1 879 ; Align 1051636 296 1407 utg265_pilon exonerate:protein2genome:local gene 1020996 1023050 2548 + . gene_id 0 ; sequence GL50803_17539-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1020996 1023050 . + . utg265_pilon exonerate:protein2genome:local exon 1020996 1023050 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1020996 1023050 2548 + . alignment_id 0 ; Query GL50803_17539-t26_1-p1 ; Align 1020996 1 2055 utg265_pilon exonerate:protein2genome:local gene 1017313 1018713 2008 - . gene_id 0 ; sequence GL50803_17540-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1017313 1018713 . - . utg265_pilon exonerate:protein2genome:local exon 1017313 1018713 . - . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 1017313 1018713 2008 - . alignment_id 0 ; Query GL50803_17540-t26_1-p1 ; Align 1018714 1 519 ; Align 1018195 176 882 utg265_pilon exonerate:protein2genome:local gene 1012370 1017214 6584 + . gene_id 0 ; sequence GL50803_17541-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1012370 1017214 . + . utg265_pilon exonerate:protein2genome:local exon 1012370 1017214 . + . insertions 3 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 1012370 1017214 6584 + . alignment_id 0 ; Query GL50803_17541-t26_1-p1 ; Align 1012370 1 522 ; Align 1012892 176 723 ; Align 1013618 417 3597 utg265_pilon exonerate:protein2genome:local gene 992472 994277 2627 - . gene_id 0 ; sequence GL50803_17543-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 992472 994277 . - . utg265_pilon exonerate:protein2genome:local exon 992472 994277 . - . insertions 0 ; deletions 7 utg265_pilon exonerate:protein2genome:local similarity 992472 994277 2627 - . alignment_id 0 ; Query GL50803_17543-t26_1-p1 ; Align 994278 1 1326 ; Align 992952 447 405 ; Align 992547 585 75 utg265_pilon exonerate:protein2genome:local gene 983105 983452 285 - . gene_id 0 ; sequence GL50803_17545-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 983105 983452 . - . utg265_pilon exonerate:protein2genome:local exon 983105 983452 . - . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 983105 983452 285 - . alignment_id 0 ; Query GL50803_17545-t26_1-p1 ; Align 983453 1 264 ; Align 983189 91 84 utg265_pilon exonerate:protein2genome:local gene 953802 955682 1721 - . gene_id 0 ; sequence GL50803_17546-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 955006 955682 . - . utg265_pilon exonerate:protein2genome:local exon 955006 955682 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 955004 955005 . - . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 954967 955005 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 954967 954968 . - . intron_id 0 ; splice_site "AA" utg265_pilon exonerate:protein2genome:local cds 953802 954966 . - . utg265_pilon exonerate:protein2genome:local exon 953802 954966 . - . insertions 6 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 953802 955682 1721 - . alignment_id 0 ; Query GL50803_17546-t26_1-p1 ; Align 955683 1 675 ; Align 954966 227 45 ; Align 954921 243 240 ; Align 954675 323 153 ; Align 954522 375 333 ; Align 954189 487 387 utg265_pilon exonerate:protein2genome:local gene 951983 952930 1622 + . gene_id 0 ; sequence GL50803_17547-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 951983 952930 . + . utg265_pilon exonerate:protein2genome:local exon 951983 952930 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 951983 952930 1622 + . alignment_id 0 ; Query GL50803_17547-t26_1-p1 ; Align 951983 1 948 utg265_pilon exonerate:protein2genome:local gene 932511 936140 4719 + . gene_id 0 ; sequence GL50803_17549-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 932511 933320 . + . utg265_pilon exonerate:protein2genome:local exon 932511 933320 . + . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 933321 933322 . + . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local intron 933321 933350 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 933349 933350 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 933351 936140 . + . utg265_pilon exonerate:protein2genome:local exon 933351 936140 . + . insertions 3 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 932511 936140 4719 + . alignment_id 0 ; Query GL50803_17549-t26_1-p1 ; Align 932511 1 774 ; Align 933288 259 33 ; Align 933351 270 1134 ; Align 934488 648 768 ; Align 935256 905 885 utg308_pilon exonerate:protein2genome:local gene 434259 435377 1702 + . gene_id 0 ; sequence GL50803_17550-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 434259 435377 . + . utg308_pilon exonerate:protein2genome:local exon 434259 435377 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 434259 435377 1702 + . alignment_id 0 ; Query GL50803_17550-t26_1-p1 ; Align 434259 1 1119 utg308_pilon exonerate:protein2genome:local gene 448422 451646 4811 + . gene_id 0 ; sequence GL50803_17551-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 448422 451646 . + . utg308_pilon exonerate:protein2genome:local exon 448422 451646 . + . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 448422 451646 4811 + . alignment_id 0 ; Query GL50803_17551-t26_1-p1 ; Align 448422 1 1167 ; Align 449592 390 2055 utg308_pilon exonerate:protein2genome:local gene 451612 452883 1878 + . gene_id 0 ; sequence GL50803_17552-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 451612 452883 . + . utg308_pilon exonerate:protein2genome:local exon 451612 452883 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 451612 452883 1878 + . alignment_id 0 ; Query GL50803_17552-t26_1-p1 ; Align 451612 1 1272 utg308_pilon exonerate:protein2genome:local gene 966741 970439 5900 + . gene_id 0 ; sequence GL50803_17558-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 966741 970439 . + . utg308_pilon exonerate:protein2genome:local exon 966741 970439 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 966741 970439 5900 + . alignment_id 0 ; Query GL50803_17558-t26_1-p1 ; Align 966741 1 1227 ; Align 967968 411 2472 utg308_pilon exonerate:protein2genome:local gene 965978 966688 999 - . gene_id 0 ; sequence GL50803_17559-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 965978 966688 . - . utg308_pilon exonerate:protein2genome:local exon 965978 966688 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 965978 966688 999 - . alignment_id 0 ; Query GL50803_17559-t26_1-p1 ; Align 966689 1 591 ; Align 966098 199 120 utg308_pilon exonerate:protein2genome:local gene 962366 964222 2336 + . gene_id 0 ; sequence GL50803_17560-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 962366 964222 . + . utg308_pilon exonerate:protein2genome:local exon 962366 964222 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 962366 964222 2336 + . alignment_id 0 ; Query GL50803_17560-t26_1-p1 ; Align 962366 1 1857 utg308_pilon exonerate:protein2genome:local gene 961307 962266 1133 + . gene_id 0 ; sequence GL50803_17561-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 961307 962266 . + . utg308_pilon exonerate:protein2genome:local exon 961307 962266 . + . insertions 24 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 961307 962266 1133 + . alignment_id 0 ; Query GL50803_17561-t26_1-p1 ; Align 961307 1 681 ; Align 961994 228 90 ; Align 962093 258 66 ; Align 962168 280 99 utg308_pilon exonerate:protein2genome:local gene 958882 960111 1474 - . gene_id 0 ; sequence GL50803_17562-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 958882 960111 . - . utg308_pilon exonerate:protein2genome:local exon 958882 960111 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 958882 960111 1474 - . alignment_id 0 ; Query GL50803_17562-t26_1-p1 ; Align 960112 1 69 ; Align 960043 25 1161 utg308_pilon exonerate:protein2genome:local gene 956431 957585 1987 + . gene_id 0 ; sequence GL50803_17563-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 956431 957585 . + . utg308_pilon exonerate:protein2genome:local exon 956431 957585 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 956431 957585 1987 + . alignment_id 0 ; Query GL50803_17563-t26_1-p1 ; Align 956431 1 1155 utg308_pilon exonerate:protein2genome:local gene 941480 942928 2377 - . gene_id 0 ; sequence GL50803_17565-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 941480 942928 . - . utg308_pilon exonerate:protein2genome:local exon 941480 942928 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 941480 942928 2377 - . alignment_id 0 ; Query GL50803_17565-t26_1-p1 ; Align 942929 1 1449 utg308_pilon exonerate:protein2genome:local gene 939320 941248 3043 - . gene_id 0 ; sequence GL50803_17566-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 939320 941248 . - . utg308_pilon exonerate:protein2genome:local exon 939320 941248 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 939320 941248 3043 - . alignment_id 0 ; Query GL50803_17566-t26_1-p1 ; Align 941249 1 1929 utg308_pilon exonerate:protein2genome:local gene 937403 939192 2803 - . gene_id 0 ; sequence GL50803_17567-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 937403 939192 . - . utg308_pilon exonerate:protein2genome:local exon 937403 939192 . - . insertions 6 ; deletions 0 ; frameshifts 5 utg308_pilon exonerate:protein2genome:local similarity 937403 939192 2803 - . alignment_id 0 ; Query GL50803_17567-t26_1-p1 ; Align 939193 1 750 ; Align 938438 251 3 ; Align 938429 252 1026 utg308_pilon exonerate:protein2genome:local gene 928972 930583 2265 - . gene_id 0 ; sequence GL50803_17568-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 928972 930583 . - . utg308_pilon exonerate:protein2genome:local exon 928972 930583 . - . insertions 0 ; deletions 3 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 928972 930583 2265 - . alignment_id 0 ; Query GL50803_17568-t26_1-p1 ; Align 930584 1 51 ; Align 930532 19 735 ; Align 929797 266 825 utg308_pilon exonerate:protein2genome:local gene 927582 928946 1811 - . gene_id 0 ; sequence GL50803_17569-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 927582 928946 . - . utg308_pilon exonerate:protein2genome:local exon 927582 928946 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 927582 928946 1811 - . alignment_id 0 ; Query GL50803_17569-t26_1-p1 ; Align 928947 1 1365 utg308_pilon exonerate:protein2genome:local gene 922934 925627 4574 + . gene_id 0 ; sequence GL50803_17570-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 922934 925627 . + . utg308_pilon exonerate:protein2genome:local exon 922934 925627 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 922934 925627 4574 + . alignment_id 0 ; Query GL50803_17570-t26_1-p1 ; Align 922934 1 2694 utg308_pilon exonerate:protein2genome:local gene 917109 920174 4625 - . gene_id 0 ; sequence GL50803_17571-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 917109 920174 . - . utg308_pilon exonerate:protein2genome:local exon 917109 920174 . - . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 917109 920174 4625 - . alignment_id 0 ; Query GL50803_17571-t26_1-p1 ; Align 920175 1 1629 ; Align 918546 545 1347 ; Align 917199 995 90 utg11_pilon exonerate:protein2genome:local gene 1445782 1447668 2880 - . gene_id 0 ; sequence GL50803_17574-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1445782 1447668 . - . utg11_pilon exonerate:protein2genome:local exon 1445782 1447668 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1445782 1447668 2880 - . alignment_id 0 ; Query GL50803_17574-t26_1-p1 ; Align 1447669 1 1887 utg11_pilon exonerate:protein2genome:local gene 1432610 1435825 4456 + . gene_id 0 ; sequence GL50803_17577-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1432610 1435825 . + . utg11_pilon exonerate:protein2genome:local exon 1432610 1435825 . + . insertions 3 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 1432610 1435825 4456 + . alignment_id 0 ; Query GL50803_17577-t26_1-p1 ; Align 1432610 1 540 ; Align 1433150 184 567 ; Align 1433720 373 228 ; Align 1433948 450 618 ; Align 1434566 657 1260 utg11_pilon exonerate:protein2genome:local gene 1048341 1051442 4621 - . gene_id 0 ; sequence GL50803_17578-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1050170 1051442 . - . utg11_pilon exonerate:protein2genome:local exon 1050170 1051442 . - . insertions 0 ; deletions 5 utg11_pilon exonerate:protein2genome:local splice5 1050168 1050169 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1050140 1050169 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1050140 1050141 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1048341 1050139 . - . utg11_pilon exonerate:protein2genome:local exon 1048341 1050139 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1048341 1051442 4621 - . alignment_id 0 ; Query GL50803_17578-t26_1-p1 ; Align 1051443 1 108 ; Align 1051335 39 1044 ; Align 1050291 389 36 ; Align 1050255 402 84 ; Align 1050138 432 1797 utg11_pilon exonerate:protein2genome:local gene 1041369 1043015 2476 - . gene_id 0 ; sequence GL50803_17579-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1041369 1043015 . - . utg11_pilon exonerate:protein2genome:local exon 1041369 1043015 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1041369 1043015 2476 - . alignment_id 0 ; Query GL50803_17579-t26_1-p1 ; Align 1043016 1 1647 utg11_pilon exonerate:protein2genome:local gene 1032581 1037827 5799 + . gene_id 0 ; sequence GL50803_17580-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1032581 1037827 . + . utg11_pilon exonerate:protein2genome:local exon 1032581 1037827 . + . insertions 18 ; deletions 17 utg11_pilon exonerate:protein2genome:local similarity 1032581 1037827 5799 + . alignment_id 0 ; Query GL50803_17580-t26_1-p1 ; Align 1032581 1 255 ; Align 1032845 86 231 ; Align 1033076 164 474 ; Align 1033550 323 252 ; Align 1033802 410 381 ; Align 1034183 538 297 ; Align 1034483 637 201 ; Align 1034684 707 105 ; Align 1034789 743 339 ; Align 1035128 857 165 ; Align 1035293 915 447 ; Align 1035740 1065 927 ; Align 1036667 1376 300 ; Align 1036970 1476 366 ; Align 1037339 1598 489 utg11_pilon exonerate:protein2genome:local gene 1003407 1004159 1186 - . gene_id 0 ; sequence GL50803_17583-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1003407 1004159 . - . utg11_pilon exonerate:protein2genome:local exon 1003407 1004159 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1003407 1004159 1186 - . alignment_id 0 ; Query GL50803_17583-t26_1-p1 ; Align 1004160 1 753 utg11_pilon exonerate:protein2genome:local gene 1008613 1009549 1248 - . gene_id 0 ; sequence GL50803_17584-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1008613 1009549 . - . utg11_pilon exonerate:protein2genome:local exon 1008613 1009549 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 1008613 1009549 1248 - . alignment_id 0 ; Query GL50803_17584-t26_1-p1 ; Align 1009550 1 285 ; Align 1009264 96 651 utg11_pilon exonerate:protein2genome:local gene 1009376 1011526 3243 + . gene_id 0 ; sequence GL50803_17585-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1009376 1011526 . + . utg11_pilon exonerate:protein2genome:local exon 1009376 1011526 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1009376 1011526 3243 + . alignment_id 0 ; Query GL50803_17585-t26_1-p1 ; Align 1009376 1 852 ; Align 1010228 286 1299 utg11_pilon exonerate:protein2genome:local gene 1011559 1012998 2325 + . gene_id 0 ; sequence GL50803_17586-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1011559 1012998 . + . utg11_pilon exonerate:protein2genome:local exon 1011559 1012998 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1011559 1012998 2325 + . alignment_id 0 ; Query GL50803_17586-t26_1-p1 ; Align 1011559 1 1440 utg11_pilon exonerate:protein2genome:local gene 1014881 1016734 2683 - . gene_id 0 ; sequence GL50803_17587-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1014881 1016734 . - . utg11_pilon exonerate:protein2genome:local exon 1014881 1016734 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1014881 1016734 2683 - . alignment_id 0 ; Query GL50803_17587-t26_1-p1 ; Align 1016735 1 1854 utg11_pilon exonerate:protein2genome:local gene 926919 928778 2454 + . gene_id 0 ; sequence GL50803_17590-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 926919 928778 . + . utg11_pilon exonerate:protein2genome:local exon 926919 928778 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 926919 928778 2454 + . alignment_id 0 ; Query GL50803_17590-t26_1-p1 ; Align 926919 6 240 ; Align 927159 87 627 ; Align 927786 297 993 utg11_pilon exonerate:protein2genome:local gene 949544 950686 1621 - . gene_id 0 ; sequence GL50803_17591-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 949544 950686 . - . utg11_pilon exonerate:protein2genome:local exon 949544 950686 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 949544 950686 1621 - . alignment_id 0 ; Query GL50803_17591-t26_1-p1 ; Align 950687 1 1143 utg11_pilon exonerate:protein2genome:local gene 969194 971740 2374 - . gene_id 0 ; sequence GL50803_17593-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 969194 971740 . - . utg11_pilon exonerate:protein2genome:local exon 969194 971740 . - . insertions 12 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 969194 971740 2374 - . alignment_id 0 ; Query GL50803_17593-t26_1-p1 ; Align 971741 1 285 ; Align 971453 96 45 ; Align 971399 111 2205 utg11_pilon exonerate:protein2genome:local gene 893541 895871 3449 - . gene_id 0 ; sequence GL50803_17596-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 893541 895871 . - . utg11_pilon exonerate:protein2genome:local exon 893541 895871 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 893541 895871 3449 - . alignment_id 0 ; Query GL50803_17596-t26_1-p1 ; Align 895872 1 2298 ; Align 893571 767 30 utg11_pilon exonerate:protein2genome:local gene 872641 873477 750 + . gene_id 0 ; sequence GL50803_17599-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 872641 873477 . + . utg11_pilon exonerate:protein2genome:local exon 872641 873477 . + . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 872641 873477 750 + . alignment_id 0 ; Query GL50803_17599-t26_1-p1 ; Align 872641 1 429 ; Align 873070 147 408 utg731_pilon exonerate:protein2genome:local gene 1060081 1060470 450 - . gene_id 0 ; sequence GL50803_17603-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1060081 1060470 . - . utg731_pilon exonerate:protein2genome:local exon 1060081 1060470 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1060081 1060470 450 - . alignment_id 0 ; Query GL50803_17603-t26_1-p1 ; Align 1060471 1 390 utg11_pilon exonerate:protein2genome:local gene 707703 708107 311 - . gene_id 0 ; sequence GL50803_17604-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 707703 708107 . - . utg11_pilon exonerate:protein2genome:local exon 707703 708107 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 707703 708107 311 - . alignment_id 0 ; Query GL50803_17604-t26_1-p1 ; Align 708108 45 405 utg731_pilon exonerate:protein2genome:local gene 1079785 1082565 3137 + . gene_id 0 ; sequence GL50803_17606-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1079785 1082565 . + . utg731_pilon exonerate:protein2genome:local exon 1079785 1082565 . + . insertions 6 ; deletions 9 utg731_pilon exonerate:protein2genome:local similarity 1079785 1082565 3137 + . alignment_id 0 ; Query GL50803_17606-t26_1-p1 ; Align 1079785 1 435 ; Align 1080226 146 204 ; Align 1080430 217 45 ; Align 1080475 233 33 ; Align 1080508 247 858 ; Align 1081366 534 162 ; Align 1081528 589 1038 utg731_pilon exonerate:protein2genome:local gene 1086913 1088280 1938 + . gene_id 0 ; sequence GL50803_17607-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1086913 1088280 . + . utg731_pilon exonerate:protein2genome:local exon 1086913 1088280 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1086913 1088280 1938 + . alignment_id 0 ; Query GL50803_17607-t26_1-p1 ; Align 1086913 1 1368 utg731_pilon exonerate:protein2genome:local gene 1088299 1090020 2610 - . gene_id 0 ; sequence GL50803_17608-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1088299 1090020 . - . utg731_pilon exonerate:protein2genome:local exon 1088299 1090020 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1088299 1090020 2610 - . alignment_id 0 ; Query GL50803_17608-t26_1-p1 ; Align 1090021 1 1722 utg731_pilon exonerate:protein2genome:local gene 1143342 1144526 1556 - . gene_id 0 ; sequence GL50803_17612-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1143342 1144526 . - . utg731_pilon exonerate:protein2genome:local exon 1143342 1144526 . - . insertions 3 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1143342 1144526 1556 - . alignment_id 0 ; Query GL50803_17612-t26_1-p1 ; Align 1144527 1 114 ; Align 1144410 39 165 ; Align 1144245 97 903 utg731_pilon exonerate:protein2genome:local gene 1157116 1161633 5828 - . gene_id 0 ; sequence GL50803_17613-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1157116 1161633 . - . utg731_pilon exonerate:protein2genome:local exon 1157116 1161633 . - . insertions 0 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 1157116 1161633 5828 - . alignment_id 0 ; Query GL50803_17613-t26_1-p1 ; Align 1161634 1 1767 ; Align 1159867 592 336 ; Align 1159531 706 2415 utg731_pilon exonerate:protein2genome:local gene 1197885 1198649 948 - . gene_id 0 ; sequence GL50803_17617-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1197885 1198649 . - . utg731_pilon exonerate:protein2genome:local exon 1197885 1198649 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1197885 1198649 948 - . alignment_id 0 ; Query GL50803_17617-t26_1-p1 ; Align 1198650 1 147 ; Align 1198503 51 618 utg731_pilon exonerate:protein2genome:local gene 1370959 1375578 6367 + . gene_id 0 ; sequence GL50803_17622-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1370959 1375578 . + . utg731_pilon exonerate:protein2genome:local exon 1370959 1375578 . + . insertions 12 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1370959 1375578 6367 + . alignment_id 0 ; Query GL50803_17622-t26_1-p1 ; Align 1370959 1 513 ; Align 1371475 172 465 ; Align 1371940 328 126 ; Align 1372072 370 141 ; Align 1372216 417 3363 utg731_pilon exonerate:protein2genome:local gene 1377821 1378939 1640 - . gene_id 0 ; sequence GL50803_17623-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1377821 1378939 . - . utg731_pilon exonerate:protein2genome:local exon 1377821 1378939 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1377821 1378939 1640 - . alignment_id 0 ; Query GL50803_17623-t26_1-p1 ; Align 1378940 1 1119 utg731_pilon exonerate:protein2genome:local gene 1379608 1381074 1636 + . gene_id 0 ; sequence GL50803_17624-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1379608 1381074 . + . utg731_pilon exonerate:protein2genome:local exon 1379608 1381074 . + . insertions 12 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1379608 1381074 1636 + . alignment_id 0 ; Query GL50803_17624-t26_1-p1 ; Align 1379608 2 525 ; Align 1380133 180 132 ; Align 1380277 224 798 utg731_pilon exonerate:protein2genome:local gene 1385679 1386728 1789 - . gene_id 0 ; sequence GL50803_17625-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1385679 1386728 . - . utg731_pilon exonerate:protein2genome:local exon 1385679 1386728 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1385679 1386728 1789 - . alignment_id 0 ; Query GL50803_17625-t26_1-p1 ; Align 1386729 1 1050 utg731_pilon exonerate:protein2genome:local gene 1386834 1387442 864 + . gene_id 0 ; sequence GL50803_17626-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1386834 1387442 . + . utg731_pilon exonerate:protein2genome:local exon 1386834 1387442 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1386834 1387442 864 + . alignment_id 0 ; Query GL50803_17626-t26_1-p1 ; Align 1386834 1 276 ; Align 1387110 94 333 utg731_pilon exonerate:protein2genome:local gene 1394940 1398854 5483 + . gene_id 0 ; sequence GL50803_17627-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1394940 1398854 . + . utg731_pilon exonerate:protein2genome:local exon 1394940 1398854 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1394940 1398854 5483 + . alignment_id 0 ; Query GL50803_17627-t26_1-p1 ; Align 1394940 1 1245 ; Align 1396185 417 2670 utg11_pilon exonerate:protein2genome:local gene 1698618 1699496 1174 - . gene_id 0 ; sequence GL50803_1770-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1698618 1699496 . - . utg11_pilon exonerate:protein2genome:local exon 1698618 1699496 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1698618 1699496 1174 - . alignment_id 0 ; Query GL50803_1770-t26_1-p1 ; Align 1699497 1 795 ; Align 1698702 267 84 utg308_pilon exonerate:protein2genome:local gene 887764 889185 1835 - . gene_id 0 ; sequence GL50803_1774-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 888276 889185 . - . utg308_pilon exonerate:protein2genome:local exon 888276 889185 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 888274 888275 . - . intron_id 1 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 888246 888275 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 888246 888247 . - . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 887764 888245 . - . utg308_pilon exonerate:protein2genome:local exon 887764 888245 . - . insertions 0 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 887764 889185 1835 - . alignment_id 0 ; Query GL50803_1774-t26_1-p1 ; Align 889186 1 909 ; Align 888244 305 9 ; Align 888235 311 471 utg212_pilon exonerate:protein2genome:local gene 77858 78426 515 - . gene_id 0 ; sequence GL50803_18015-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 77858 78426 . - . utg212_pilon exonerate:protein2genome:local exon 77858 78426 . - . insertions 6 ; deletions 0 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 77858 78426 515 - . alignment_id 0 ; Query GL50803_18015-t26_1-p1 ; Align 78427 2 225 ; Align 78196 77 51 ; Align 78143 94 285 utg18_pilon exonerate:protein2genome:local gene 403779 404063 418 - . gene_id 0 ; sequence GL50803_18058-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 403779 404063 . - . utg18_pilon exonerate:protein2genome:local exon 403779 404063 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 403779 404063 418 - . alignment_id 0 ; Query GL50803_18058-t26_1-p1 ; Align 404064 1 285 utg11_pilon exonerate:protein2genome:local gene 1462085 1462405 364 + . gene_id 0 ; sequence GL50803_18172-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1462085 1462405 . + . utg11_pilon exonerate:protein2genome:local exon 1462085 1462405 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1462085 1462405 364 + . alignment_id 0 ; Query GL50803_18172-t26_1-p1 ; Align 1462085 4 321 utg212_pilon exonerate:protein2genome:local gene 14173 244103 404 - . gene_id 0 ; sequence GL50803_18240-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 244076 244103 . - . utg212_pilon exonerate:protein2genome:local exon 244076 244103 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 244074 244075 . - . intron_id 1 ; splice_site "CA" utg212_pilon exonerate:protein2genome:local intron 115936 244075 . - . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115936 115937 . - . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115734 115935 . - . utg212_pilon exonerate:protein2genome:local exon 115734 115935 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 115732 115733 . - . intron_id 2 ; splice_site "AT" utg212_pilon exonerate:protein2genome:local intron 14438 115733 . - . intron_id 2 utg212_pilon exonerate:protein2genome:local splice3 14438 14439 . - . intron_id 1 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 14173 14437 . - . utg212_pilon exonerate:protein2genome:local exon 14173 14437 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14173 244103 404 - . alignment_id 0 ; Query GL50803_18240-t26_1-p1 ; Align 244104 2 27 ; Align 115934 12 198 ; Align 14437 79 264 utg99_pilon exonerate:protein2genome:local gene 270975 271124 141 - . gene_id 0 ; sequence GL50803_1829-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 270975 271124 . - . utg99_pilon exonerate:protein2genome:local exon 270975 271124 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 270975 271124 141 - . alignment_id 0 ; Query GL50803_1829-t26_1-p1 ; Align 271125 1 150 utg99_pilon exonerate:protein2genome:local gene 270538 271286 848 + . gene_id 0 ; sequence GL50803_1830-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 270538 271286 . + . utg99_pilon exonerate:protein2genome:local exon 270538 271286 . + . insertions 3 ; deletions 0 ; frameshifts 2 utg99_pilon exonerate:protein2genome:local similarity 270538 271286 848 + . alignment_id 0 ; Query GL50803_1830-t26_1-p1 ; Align 270538 2 75 ; Align 270614 27 36 ; Align 270651 39 618 ; Align 271272 245 15 utg349_pilon exonerate:protein2genome:local gene 1406261 1406636 247 + . gene_id 0 ; sequence GL50803_18317-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1406261 1406636 . + . utg349_pilon exonerate:protein2genome:local exon 1406261 1406636 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 1406261 1406636 247 + . alignment_id 0 ; Query GL50803_18317-t26_1-p1 ; Align 1406261 1 132 ; Align 1406394 45 243 utg47_pilon exonerate:protein2genome:local gene 388537 388863 342 + . gene_id 0 ; sequence GL50803_18347-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 388537 388863 . + . utg47_pilon exonerate:protein2genome:local exon 388537 388863 . + . insertions 9 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 388537 388863 342 + . alignment_id 0 ; Query GL50803_18347-t26_1-p1 ; Align 388537 52 198 ; Align 388738 118 27 ; Align 388771 127 93 utg349_pilon exonerate:protein2genome:local gene 1411981 1412262 222 + . gene_id 0 ; sequence GL50803_18352-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1411981 1412262 . + . utg349_pilon exonerate:protein2genome:local exon 1411981 1412262 . + . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 1411981 1412262 222 + . alignment_id 0 ; Query GL50803_18352-t26_1-p1 ; Align 1411981 2 156 ; Align 1412137 57 126 utg212_pilon exonerate:protein2genome:local gene 14221 255030 318 - . gene_id 0 ; sequence GL50803_18354-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 254809 255030 . - . utg212_pilon exonerate:protein2genome:local exon 254809 255030 . - . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local splice5 254807 254808 . - . intron_id 1 ; splice_site "GT" utg212_pilon exonerate:protein2genome:local intron 111166 254808 . - . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 111166 111167 . - . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 111131 111165 . - . utg212_pilon exonerate:protein2genome:local exon 111131 111165 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 111129 111130 . - . intron_id 2 ; splice_site "AT" utg212_pilon exonerate:protein2genome:local intron 14438 111130 . - . intron_id 2 utg212_pilon exonerate:protein2genome:local splice3 14438 14439 . - . intron_id 1 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 14221 14437 . - . utg212_pilon exonerate:protein2genome:local exon 14221 14437 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14221 255030 318 - . alignment_id 0 ; Query GL50803_18354-t26_1-p1 ; Align 255031 24 102 ; Align 254929 59 120 ; Align 111166 99 33 ; Align 14437 111 216 utg11_pilon exonerate:protein2genome:local gene 299723 300091 400 - . gene_id 0 ; sequence GL50803_18361-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 299723 300091 . - . utg11_pilon exonerate:protein2genome:local exon 299723 300091 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 299723 300091 400 - . alignment_id 0 ; Query GL50803_18361-t26_1-p1 ; Align 300092 1 369 utg212_pilon exonerate:protein2genome:local gene 15332 164441 323 - . gene_id 0 ; sequence GL50803_18368-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 164206 164441 . - . utg212_pilon exonerate:protein2genome:local exon 164206 164441 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 164204 164205 . - . intron_id 1 ; splice_site "GT" utg212_pilon exonerate:protein2genome:local intron 15522 164205 . - . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 15522 15523 . - . intron_id 0 ; splice_site "CG" utg212_pilon exonerate:protein2genome:local cds 15332 15521 . - . utg212_pilon exonerate:protein2genome:local exon 15332 15521 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 15332 164441 323 - . alignment_id 0 ; Query GL50803_18368-t26_1-p1 ; Align 164442 2 234 ; Align 15521 81 189 utg99_pilon exonerate:protein2genome:local gene 384864 385157 243 - . gene_id 0 ; sequence GL50803_18374-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 384864 385157 . - . utg99_pilon exonerate:protein2genome:local exon 384864 385157 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 384864 385157 243 - . alignment_id 0 ; Query GL50803_18374-t26_1-p1 ; Align 385158 1 294 utg265_pilon exonerate:protein2genome:local gene 1079699 1079881 163 + . gene_id 0 ; sequence GL50803_18435-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1079699 1079881 . + . utg265_pilon exonerate:protein2genome:local exon 1079699 1079881 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1079699 1079881 163 + . alignment_id 0 ; Query GL50803_18435-t26_1-p1 ; Align 1079699 1 183 utg731_pilon exonerate:protein2genome:local gene 206640 206957 292 + . gene_id 0 ; sequence GL50803_18464-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 206640 206957 . + . utg731_pilon exonerate:protein2genome:local exon 206640 206957 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 206640 206957 292 + . alignment_id 0 ; Query GL50803_18464-t26_1-p1 ; Align 206640 1 318 utg731_pilon exonerate:protein2genome:local gene 206687 206983 286 - . gene_id 0 ; sequence GL50803_18465-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 206687 206983 . - . utg731_pilon exonerate:protein2genome:local exon 206687 206983 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 206687 206983 286 - . alignment_id 0 ; Query GL50803_18465-t26_1-p1 ; Align 206984 18 297 utg47_pilon exonerate:protein2genome:local gene 69702 70061 523 - . gene_id 0 ; sequence GL50803_18467-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 69702 70061 . - . utg47_pilon exonerate:protein2genome:local exon 69702 70061 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 69702 70061 523 - . alignment_id 0 ; Query GL50803_18467-t26_1-p1 ; Align 70062 1 360 utg349_pilon exonerate:protein2genome:local gene 778068 780860 4159 + . gene_id 0 ; sequence GL50803_18470-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 778068 780860 . + . utg349_pilon exonerate:protein2genome:local exon 778068 780860 . + . insertions 9 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 778068 780860 4159 + . alignment_id 0 ; Query GL50803_18470-t26_1-p1 ; Align 778068 1 672 ; Align 778743 225 156 ; Align 778899 281 807 ; Align 779706 551 624 ; Align 780336 759 525 utg349_pilon exonerate:protein2genome:local gene 777670 778113 614 - . gene_id 0 ; sequence GL50803_18471-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 777670 778113 . - . utg349_pilon exonerate:protein2genome:local exon 777670 778113 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 777670 778113 614 - . alignment_id 0 ; Query GL50803_18471-t26_1-p1 ; Align 778114 2 69 ; Align 778042 25 372 utg47_pilon exonerate:protein2genome:local gene 1532593 1532973 461 - . gene_id 0 ; sequence GL50803_18484-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1532593 1532973 . - . utg47_pilon exonerate:protein2genome:local exon 1532593 1532973 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1532593 1532973 461 - . alignment_id 0 ; Query GL50803_18484-t26_1-p1 ; Align 1532974 1 381 utg265_pilon exonerate:protein2genome:local gene 622980 623333 394 - . gene_id 0 ; sequence GL50803_18488-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 622980 623333 . - . utg265_pilon exonerate:protein2genome:local exon 622980 623333 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 622980 623333 394 - . alignment_id 0 ; Query GL50803_18488-t26_1-p1 ; Align 623334 2 354 utg11_pilon exonerate:protein2genome:local gene 295633 296082 441 - . gene_id 0 ; sequence GL50803_18556-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 295633 296082 . - . utg11_pilon exonerate:protein2genome:local exon 295633 296082 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 295633 296082 441 - . alignment_id 0 ; Query GL50803_18556-t26_1-p1 ; Align 296083 1 309 ; Align 295771 104 138 utg265_pilon exonerate:protein2genome:local gene 629783 630214 448 - . gene_id 0 ; sequence GL50803_18559-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 629783 630214 . - . utg265_pilon exonerate:protein2genome:local exon 629783 630214 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 629783 630214 448 - . alignment_id 0 ; Query GL50803_18559-t26_1-p1 ; Align 630215 1 159 ; Align 630056 55 273 utg265_pilon exonerate:protein2genome:local gene 629886 630215 279 + . gene_id 0 ; sequence GL50803_18560-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 629886 630215 . + . utg265_pilon exonerate:protein2genome:local exon 629886 630215 . + . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 629886 630215 279 + . alignment_id 0 ; Query GL50803_18560-t26_1-p1 ; Align 629886 1 150 ; Align 630036 52 180 utg47_pilon exonerate:protein2genome:local gene 326591 326914 359 + . gene_id 0 ; sequence GL50803_18570-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 326591 326914 . + . utg47_pilon exonerate:protein2genome:local exon 326591 326914 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 326591 326914 359 + . alignment_id 0 ; Query GL50803_18570-t26_1-p1 ; Align 326591 1 324 utg731_pilon exonerate:protein2genome:local gene 486530 486820 264 + . gene_id 0 ; sequence GL50803_18588-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 486530 486820 . + . utg731_pilon exonerate:protein2genome:local exon 486530 486820 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 486530 486820 264 + . alignment_id 0 ; Query GL50803_18588-t26_1-p1 ; Align 486530 1 291 utg64_pilon exonerate:protein2genome:local gene 532697 533092 396 + . gene_id 0 ; sequence GL50803_18632-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 532697 533092 . + . utg64_pilon exonerate:protein2genome:local exon 532697 533092 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 532697 533092 396 + . alignment_id 0 ; Query GL50803_18632-t26_1-p1 ; Align 532697 4 396 utg64_pilon exonerate:protein2genome:local gene 540109 540483 527 + . gene_id 0 ; sequence GL50803_18633-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 540109 540483 . + . utg64_pilon exonerate:protein2genome:local exon 540109 540483 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 540109 540483 527 + . alignment_id 0 ; Query GL50803_18633-t26_1-p1 ; Align 540109 1 375 utg11_pilon exonerate:protein2genome:local gene 376013 376366 473 - . gene_id 0 ; sequence GL50803_18679-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 376013 376366 . - . utg11_pilon exonerate:protein2genome:local exon 376013 376366 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 376013 376366 473 - . alignment_id 0 ; Query GL50803_18679-t26_1-p1 ; Align 376367 1 354 utg212_pilon exonerate:protein2genome:local gene 189637 189945 463 + . gene_id 0 ; sequence GL50803_18713-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 189637 189945 . + . utg212_pilon exonerate:protein2genome:local exon 189637 189945 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 189637 189945 463 + . alignment_id 0 ; Query GL50803_18713-t26_1-p1 ; Align 189637 1 309 utg265_pilon exonerate:protein2genome:local gene 476303 555354 138 - . gene_id 0 ; sequence GL50803_18722-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 555270 555354 . - . utg265_pilon exonerate:protein2genome:local exon 555270 555354 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 555268 555269 . - . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 476506 555269 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 476506 476507 . - . intron_id 0 ; splice_site "AT" utg265_pilon exonerate:protein2genome:local cds 476303 476505 . - . utg265_pilon exonerate:protein2genome:local exon 476303 476505 . - . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 476303 555354 138 - . alignment_id 0 ; Query GL50803_18722-t26_1-p1 ; Align 555355 5 84 ; Align 476504 34 147 ; Align 476354 83 51 utg11_pilon exonerate:protein2genome:local gene 863149 1019025 208 + . gene_id 0 ; sequence GL50803_18725-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 863149 863349 . + . utg11_pilon exonerate:protein2genome:local exon 863149 863349 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 863350 863351 . + . intron_id 1 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 863350 1018875 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1018874 1018875 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1018876 1019025 . + . utg11_pilon exonerate:protein2genome:local exon 1018876 1019025 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 863149 1019025 208 + . alignment_id 0 ; Query GL50803_18725-t26_1-p1 ; Align 863149 7 201 ; Align 1018876 74 150 utg47_pilon exonerate:protein2genome:local gene 785982 869357 196 - . gene_id 0 ; sequence GL50803_18726-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 869169 869357 . - . utg47_pilon exonerate:protein2genome:local exon 869169 869357 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 869167 869168 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 786078 869168 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 786078 786079 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 785982 786077 . - . utg47_pilon exonerate:protein2genome:local exon 785982 786077 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 785982 869357 196 - . alignment_id 0 ; Query GL50803_18726-t26_1-p1 ; Align 869358 6 189 ; Align 786078 69 36 ; Align 786039 81 57 utg47_pilon exonerate:protein2genome:local gene 2289929 2290269 464 + . gene_id 0 ; sequence GL50803_1875-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2289929 2290269 . + . utg47_pilon exonerate:protein2genome:local exon 2289929 2290269 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 2289929 2290269 464 + . alignment_id 0 ; Query GL50803_1875-t26_1-p1 ; Align 2289929 30 33 ; Align 2289964 41 306 utg64_pilon exonerate:protein2genome:local gene 268741 269067 342 - . gene_id 0 ; sequence GL50803_18771-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 268741 269067 . - . utg64_pilon exonerate:protein2genome:local exon 268741 269067 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 268741 269067 342 - . alignment_id 0 ; Query GL50803_18771-t26_1-p1 ; Align 269068 1 327 utg349_pilon exonerate:protein2genome:local gene 1416632 1417033 302 - . gene_id 0 ; sequence GL50803_18794-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1416632 1417033 . - . utg349_pilon exonerate:protein2genome:local exon 1416632 1417033 . - . insertions 6 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1416632 1417033 302 - . alignment_id 0 ; Query GL50803_18794-t26_1-p1 ; Align 1417034 1 135 ; Align 1416893 46 261 utg265_pilon exonerate:protein2genome:local gene 891866 892213 430 - . gene_id 0 ; sequence GL50803_18803-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 891866 892213 . - . utg265_pilon exonerate:protein2genome:local exon 891866 892213 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 891866 892213 430 - . alignment_id 0 ; Query GL50803_18803-t26_1-p1 ; Align 892214 1 348 utg265_pilon exonerate:protein2genome:local gene 899279 899602 215 + . gene_id 0 ; sequence GL50803_18805-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 899279 899602 . + . utg265_pilon exonerate:protein2genome:local exon 899279 899602 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 899279 899602 215 + . alignment_id 0 ; Query GL50803_18805-t26_1-p1 ; Align 899279 2 324 utg11_pilon exonerate:protein2genome:local gene 1413718 1413837 115 - . gene_id 0 ; sequence GL50803_1882-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1413718 1413837 . - . utg11_pilon exonerate:protein2genome:local exon 1413718 1413837 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1413718 1413837 115 - . alignment_id 0 ; Query GL50803_1882-t26_1-p1 ; Align 1413838 8 120 utg11_pilon exonerate:protein2genome:local gene 1463088 1463514 431 + . gene_id 0 ; sequence GL50803_18854-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1463088 1463514 . + . utg11_pilon exonerate:protein2genome:local exon 1463088 1463514 . + . insertions 0 ; deletions 0 ; frameshifts 4 utg11_pilon exonerate:protein2genome:local similarity 1463088 1463514 431 + . alignment_id 0 ; Query GL50803_18854-t26_1-p1 ; Align 1463088 1 210 ; Align 1463302 71 213 utg11_pilon exonerate:protein2genome:local gene 1467511 1467810 449 - . gene_id 0 ; sequence GL50803_18856-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1467511 1467810 . - . utg11_pilon exonerate:protein2genome:local exon 1467511 1467810 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1467511 1467810 449 - . alignment_id 0 ; Query GL50803_18856-t26_1-p1 ; Align 1467811 15 300 utg349_pilon exonerate:protein2genome:local gene 1071863 1072273 435 + . gene_id 0 ; sequence GL50803_18859-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1071863 1072273 . + . utg349_pilon exonerate:protein2genome:local exon 1071863 1072273 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1071863 1072273 435 + . alignment_id 0 ; Query GL50803_18859-t26_1-p1 ; Align 1071863 1 411 utg99_pilon exonerate:protein2genome:local gene 280924 281280 415 - . gene_id 0 ; sequence GL50803_18879-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 280924 281280 . - . utg99_pilon exonerate:protein2genome:local exon 280924 281280 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 280924 281280 415 - . alignment_id 0 ; Query GL50803_18879-t26_1-p1 ; Align 281281 1 357 utg47_pilon exonerate:protein2genome:local gene 572372 573286 208 + . gene_id 0 ; sequence GL50803_18891-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 572372 572560 . + . utg47_pilon exonerate:protein2genome:local exon 572372 572560 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 572561 572562 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 572561 573172 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 573171 573172 . + . intron_id 0 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local cds 573173 573286 . + . utg47_pilon exonerate:protein2genome:local exon 573173 573286 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 572372 573286 208 + . alignment_id 0 ; Query GL50803_18891-t26_1-p1 ; Align 572372 3 189 ; Align 573173 66 114 utg731_pilon exonerate:protein2genome:local gene 296236 296586 284 + . gene_id 0 ; sequence GL50803_18892-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 296236 296586 . + . utg731_pilon exonerate:protein2genome:local exon 296236 296586 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 296236 296586 284 + . alignment_id 0 ; Query GL50803_18892-t26_1-p1 ; Align 296236 3 351 utg99_pilon exonerate:protein2genome:local gene 200604 201392 1036 + . gene_id 0 ; sequence GL50803_1890-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 200604 201392 . + . utg99_pilon exonerate:protein2genome:local exon 200604 201392 . + . insertions 9 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 200604 201392 1036 + . alignment_id 0 ; Query GL50803_1890-t26_1-p1 ; Align 200604 1 675 ; Align 201288 226 105 utg47_pilon exonerate:protein2genome:local gene 2010226 2010432 180 - . gene_id 0 ; sequence GL50803_18927-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2010226 2010432 . - . utg47_pilon exonerate:protein2genome:local exon 2010226 2010432 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2010226 2010432 180 - . alignment_id 0 ; Query GL50803_18927-t26_1-p1 ; Align 2010433 32 207 utg308_pilon exonerate:protein2genome:local gene 155933 156613 934 - . gene_id 0 ; sequence GL50803_1894-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 155933 156613 . - . utg308_pilon exonerate:protein2genome:local exon 155933 156613 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 155933 156613 934 - . alignment_id 0 ; Query GL50803_1894-t26_1-p1 ; Align 156614 1 681 utg18_pilon exonerate:protein2genome:local gene 54446 54994 427 - . gene_id 0 ; sequence GL50803_18998-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 54446 54994 . - . utg18_pilon exonerate:protein2genome:local exon 54446 54994 . - . insertions 6 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 54446 54994 427 - . alignment_id 0 ; Query GL50803_18998-t26_1-p1 ; Align 54995 2 318 ; Align 54671 108 225 utg212_pilon exonerate:protein2genome:local gene 32693 32977 425 + . gene_id 0 ; sequence GL50803_19002-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 32693 32977 . + . utg212_pilon exonerate:protein2genome:local exon 32693 32977 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 32693 32977 425 + . alignment_id 0 ; Query GL50803_19002-t26_1-p1 ; Align 32693 11 285 utg212_pilon exonerate:protein2genome:local gene 29467 29772 499 - . gene_id 0 ; sequence GL50803_19003-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 29467 29772 . - . utg212_pilon exonerate:protein2genome:local exon 29467 29772 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 29467 29772 499 - . alignment_id 0 ; Query GL50803_19003-t26_1-p1 ; Align 29773 1 306 utg212_pilon exonerate:protein2genome:local gene 26116 26592 524 - . gene_id 0 ; sequence GL50803_19005-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 26116 26592 . - . utg212_pilon exonerate:protein2genome:local exon 26116 26592 . - . insertions 0 ; deletions 3 utg212_pilon exonerate:protein2genome:local similarity 26116 26592 524 - . alignment_id 0 ; Query GL50803_19005-t26_1-p1 ; Align 26593 11 147 ; Align 26446 63 330 utg731_pilon exonerate:protein2genome:local gene 1326554 1343766 214 - . gene_id 0 ; sequence GL50803_19007-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1343568 1343766 . - . utg731_pilon exonerate:protein2genome:local exon 1343568 1343766 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1343566 1343567 . - . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1326718 1343567 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1326718 1326719 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1326554 1326717 . - . utg731_pilon exonerate:protein2genome:local exon 1326554 1326717 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1326554 1343766 214 - . alignment_id 0 ; Query GL50803_19007-t26_1-p1 ; Align 1343767 12 198 ; Align 1326716 79 162 utg47_pilon exonerate:protein2genome:local gene 729055 729702 931 + . gene_id 0 ; sequence GL50803_1902-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 729055 729702 . + . utg47_pilon exonerate:protein2genome:local exon 729055 729702 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 729055 729702 931 + . alignment_id 0 ; Query GL50803_1902-t26_1-p1 ; Align 729055 1 648 utg308_pilon exonerate:protein2genome:local gene 216923 217441 539 - . gene_id 0 ; sequence GL50803_19023-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 216923 217441 . - . utg308_pilon exonerate:protein2genome:local exon 216923 217441 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 216923 217441 539 - . alignment_id 0 ; Query GL50803_19023-t26_1-p1 ; Align 217442 1 519 utg47_pilon exonerate:protein2genome:local gene 728376 729026 890 + . gene_id 0 ; sequence GL50803_1903-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 728376 729026 . + . utg47_pilon exonerate:protein2genome:local exon 728376 729026 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 728376 729026 890 + . alignment_id 0 ; Query GL50803_1903-t26_1-p1 ; Align 728376 1 651 utg47_pilon exonerate:protein2genome:local gene 475648 476055 399 - . gene_id 0 ; sequence GL50803_19057-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 475648 476055 . - . utg47_pilon exonerate:protein2genome:local exon 475648 476055 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 475648 476055 399 - . alignment_id 0 ; Query GL50803_19057-t26_1-p1 ; Align 476056 1 408 utg349_pilon exonerate:protein2genome:local gene 710603 711185 538 + . gene_id 0 ; sequence GL50803_19062-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 710603 711185 . + . utg349_pilon exonerate:protein2genome:local exon 710603 711185 . + . insertions 3 ; deletions 1 ; frameshifts 4 utg349_pilon exonerate:protein2genome:local similarity 710603 711185 538 + . alignment_id 0 ; Query GL50803_19062-t26_1-p1 ; Align 710603 5 69 ; Align 710672 29 30 ; Align 710705 39 15 ; Align 710724 44 462 utg349_pilon exonerate:protein2genome:local gene 710417 710694 229 + . gene_id 0 ; sequence GL50803_19063-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 710417 710694 . + . utg349_pilon exonerate:protein2genome:local exon 710417 710694 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 710417 710694 229 + . alignment_id 0 ; Query GL50803_19063-t26_1-p1 ; Align 710417 1 195 ; Align 710614 67 54 ; Align 710668 86 27 utg731_pilon exonerate:protein2genome:local gene 1508084 1508533 389 - . gene_id 0 ; sequence GL50803_19076-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1508084 1508533 . - . utg731_pilon exonerate:protein2genome:local exon 1508084 1508533 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1508084 1508533 389 - . alignment_id 0 ; Query GL50803_19076-t26_1-p1 ; Align 1508534 31 450 utg731_pilon exonerate:protein2genome:local gene 1604053 1604383 351 + . gene_id 0 ; sequence GL50803_19078-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1604053 1604383 . + . utg731_pilon exonerate:protein2genome:local exon 1604053 1604383 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 1604053 1604383 351 + . alignment_id 0 ; Query GL50803_19078-t26_1-p1 ; Align 1604053 11 273 ; Align 1604327 102 57 utg212_pilon exonerate:protein2genome:local gene 613313 614386 1554 + . gene_id 0 ; sequence GL50803_1908-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 613313 614386 . + . utg212_pilon exonerate:protein2genome:local exon 613313 614386 . + . insertions 6 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 613313 614386 1554 + . alignment_id 0 ; Query GL50803_1908-t26_1-p1 ; Align 613313 1 810 ; Align 614129 271 258 utg212_pilon exonerate:protein2genome:local gene 614430 615092 989 + . gene_id 0 ; sequence GL50803_1909-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 614430 615092 . + . utg212_pilon exonerate:protein2genome:local exon 614430 615092 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 614430 615092 989 + . alignment_id 0 ; Query GL50803_1909-t26_1-p1 ; Align 614430 1 663 utg99_pilon exonerate:protein2genome:local gene 167595 167896 114 + . gene_id 0 ; sequence GL50803_19098-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 167595 167896 . + . utg99_pilon exonerate:protein2genome:local exon 167595 167896 . + . insertions 0 ; deletions 0 ; frameshifts 5 utg99_pilon exonerate:protein2genome:local similarity 167595 167896 114 + . alignment_id 0 ; Query GL50803_19098-t26_1-p1 ; Align 167595 2 39 ; Align 167639 15 258 utg212_pilon exonerate:protein2genome:local gene 402533 405111 204 - . gene_id 0 ; sequence GL50803_19100-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 404855 405111 . - . utg212_pilon exonerate:protein2genome:local exon 404855 405111 . - . insertions 6 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 404853 404854 . - . intron_id 1 ; splice_site "GT" utg212_pilon exonerate:protein2genome:local intron 402731 404854 . - . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 402731 402732 . - . intron_id 0 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local cds 402533 402730 . - . utg212_pilon exonerate:protein2genome:local exon 402533 402730 . - . insertions 0 ; deletions 3 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 402533 405111 204 - . alignment_id 0 ; Query GL50803_19100-t26_1-p1 ; Align 405112 1 114 ; Align 404995 39 42 ; Align 404950 53 93 ; Align 402730 85 75 ; Align 402655 111 57 ; Align 402598 132 18 ; Align 402578 138 45 utg47_pilon exonerate:protein2genome:local gene 1508014 1508483 399 - . gene_id 0 ; sequence GL50803_19109-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1508014 1508483 . - . utg47_pilon exonerate:protein2genome:local exon 1508014 1508483 . - . insertions 0 ; deletions 2 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1508014 1508483 399 - . alignment_id 0 ; Query GL50803_19109-t26_1-p1 ; Align 1508484 1 216 ; Align 1508268 75 12 ; Align 1508254 79 240 utg265_pilon exonerate:protein2genome:local gene 140685 140990 231 - . gene_id 0 ; sequence GL50803_19114-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 140685 140990 . - . utg265_pilon exonerate:protein2genome:local exon 140685 140990 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 140685 140990 231 - . alignment_id 0 ; Query GL50803_19114-t26_1-p1 ; Align 140991 1 306 utg265_pilon exonerate:protein2genome:local gene 137440 137724 223 - . gene_id 0 ; sequence GL50803_19115-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 137440 137724 . - . utg265_pilon exonerate:protein2genome:local exon 137440 137724 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 137440 137724 223 - . alignment_id 0 ; Query GL50803_19115-t26_1-p1 ; Align 137725 3 285 utg265_pilon exonerate:protein2genome:local gene 136793 137125 104 - . gene_id 0 ; sequence GL50803_19116-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 136793 137125 . - . utg265_pilon exonerate:protein2genome:local exon 136793 137125 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 136793 137125 104 - . alignment_id 0 ; Query GL50803_19116-t26_1-p1 ; Align 137126 1 333 utg99_pilon exonerate:protein2genome:local gene 37101 37394 246 - . gene_id 0 ; sequence GL50803_19119-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 37101 37394 . - . utg99_pilon exonerate:protein2genome:local exon 37101 37394 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 37101 37394 246 - . alignment_id 0 ; Query GL50803_19119-t26_1-p1 ; Align 37395 3 294 utg99_pilon exonerate:protein2genome:local gene 36758 37213 292 + . gene_id 0 ; sequence GL50803_19120-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 36758 37213 . + . utg99_pilon exonerate:protein2genome:local exon 36758 37213 . + . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 36758 37213 292 + . alignment_id 0 ; Query GL50803_19120-t26_1-p1 ; Align 36758 1 216 ; Align 36977 73 237 utg99_pilon exonerate:protein2genome:local gene 17429 17800 311 - . gene_id 0 ; sequence GL50803_19125-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 17429 17800 . - . utg99_pilon exonerate:protein2genome:local exon 17429 17800 . - . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 17429 17800 311 - . alignment_id 0 ; Query GL50803_19125-t26_1-p1 ; Align 17801 1 342 ; Align 17456 115 27 utg265_pilon exonerate:protein2genome:local gene 545271 545552 202 + . gene_id 0 ; sequence GL50803_19142-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 545271 545552 . + . utg265_pilon exonerate:protein2genome:local exon 545271 545552 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 545271 545552 202 + . alignment_id 0 ; Query GL50803_19142-t26_1-p1 ; Align 545271 14 282 utg212_pilon exonerate:protein2genome:local gene 47869 354463 316 - . gene_id 0 ; sequence GL50803_19182-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 354325 354463 . - . utg212_pilon exonerate:protein2genome:local exon 354325 354463 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 354323 354324 . - . intron_id 1 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local intron 254797 354324 . - . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 254797 254798 . - . intron_id 0 ; splice_site "CG" utg212_pilon exonerate:protein2genome:local cds 254344 254796 . - . utg212_pilon exonerate:protein2genome:local exon 254344 254796 . - . insertions 9 ; deletions 1 utg212_pilon exonerate:protein2genome:local splice5 254342 254343 . - . intron_id 2 ; splice_site "GT" utg212_pilon exonerate:protein2genome:local intron 95681 254343 . - . intron_id 2 utg212_pilon exonerate:protein2genome:local splice3 95681 95682 . - . intron_id 1 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 95648 95680 . - . utg212_pilon exonerate:protein2genome:local exon 95648 95680 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 95646 95647 . - . intron_id 3 ; splice_site "GA" utg212_pilon exonerate:protein2genome:local intron 48081 95647 . - . intron_id 3 utg212_pilon exonerate:protein2genome:local splice3 48081 48082 . - . intron_id 2 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 47869 48080 . - . utg212_pilon exonerate:protein2genome:local exon 47869 48080 . - . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 47869 354463 316 - . alignment_id 0 ; Query GL50803_19182-t26_1-p1 ; Align 354464 2 138 ; Align 254795 49 126 ; Align 254666 91 105 ; Align 254555 126 63 ; Align 254492 148 147 ; Align 95679 198 30 ; Align 48079 209 90 ; Align 47986 239 117 utg265_pilon exonerate:protein2genome:local gene 67252 67857 785 - . gene_id 0 ; sequence GL50803_19189-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 67252 67857 . - . utg265_pilon exonerate:protein2genome:local exon 67252 67857 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 67252 67857 785 - . alignment_id 0 ; Query GL50803_19189-t26_1-p1 ; Align 67858 1 606 utg47_pilon exonerate:protein2genome:local gene 1089311 1090211 704 - . gene_id 0 ; sequence GL50803_19203-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1089836 1090211 . - . utg47_pilon exonerate:protein2genome:local exon 1089836 1090211 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1089834 1089835 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1089658 1089835 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1089658 1089659 . - . intron_id 0 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local cds 1089311 1089657 . - . utg47_pilon exonerate:protein2genome:local exon 1089311 1089657 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1089311 1090211 704 - . alignment_id 0 ; Query GL50803_19203-t26_1-p1 ; Align 1090212 1 375 ; Align 1089656 127 345 utg47_pilon exonerate:protein2genome:local gene 1084617 1085054 510 - . gene_id 0 ; sequence GL50803_19204-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1084617 1085054 . - . utg47_pilon exonerate:protein2genome:local exon 1084617 1085054 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1084617 1085054 510 - . alignment_id 0 ; Query GL50803_19204-t26_1-p1 ; Align 1085055 1 438 utg47_pilon exonerate:protein2genome:local gene 1074012 1074341 379 + . gene_id 0 ; sequence GL50803_19208-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1074012 1074341 . + . utg47_pilon exonerate:protein2genome:local exon 1074012 1074341 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1074012 1074341 379 + . alignment_id 0 ; Query GL50803_19208-t26_1-p1 ; Align 1074012 1 330 utg11_pilon exonerate:protein2genome:local gene 229287 229604 348 + . gene_id 0 ; sequence GL50803_19220-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 229287 229604 . + . utg11_pilon exonerate:protein2genome:local exon 229287 229604 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 229287 229604 348 + . alignment_id 0 ; Query GL50803_19220-t26_1-p1 ; Align 229287 23 318 utg11_pilon exonerate:protein2genome:local gene 251536 251751 247 - . gene_id 0 ; sequence GL50803_19222-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 251536 251751 . - . utg11_pilon exonerate:protein2genome:local exon 251536 251751 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 251536 251751 247 - . alignment_id 0 ; Query GL50803_19222-t26_1-p1 ; Align 251752 1 216 utg212_pilon exonerate:protein2genome:local gene 272102 272471 196 - . gene_id 0 ; sequence GL50803_19226-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 272102 272471 . - . utg212_pilon exonerate:protein2genome:local exon 272102 272471 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 272102 272471 196 - . alignment_id 0 ; Query GL50803_19226-t26_1-p1 ; Align 272472 11 276 ; Align 272195 103 93 utg47_pilon exonerate:protein2genome:local gene 415101 415553 608 + . gene_id 0 ; sequence GL50803_19228-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 415101 415553 . + . utg47_pilon exonerate:protein2genome:local exon 415101 415553 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 415101 415553 608 + . alignment_id 0 ; Query GL50803_19228-t26_1-p1 ; Align 415101 11 453 utg11_pilon exonerate:protein2genome:local gene 189274 189690 455 - . gene_id 0 ; sequence GL50803_19230-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 189274 189690 . - . utg11_pilon exonerate:protein2genome:local exon 189274 189690 . - . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 189274 189690 455 - . alignment_id 0 ; Query GL50803_19230-t26_1-p1 ; Align 189691 1 381 ; Align 189310 132 36 utg11_pilon exonerate:protein2genome:local gene 211253 211525 217 + . gene_id 0 ; sequence GL50803_19233-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 211253 211525 . + . utg11_pilon exonerate:protein2genome:local exon 211253 211525 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 211253 211525 217 + . alignment_id 0 ; Query GL50803_19233-t26_1-p1 ; Align 211253 43 273 utg212_pilon exonerate:protein2genome:local gene 153534 153890 319 - . gene_id 0 ; sequence GL50803_19237-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 153534 153890 . - . utg212_pilon exonerate:protein2genome:local exon 153534 153890 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 153534 153890 319 - . alignment_id 0 ; Query GL50803_19237-t26_1-p1 ; Align 153891 3 357 utg212_pilon exonerate:protein2genome:local gene 173067 173462 384 - . gene_id 0 ; sequence GL50803_19245-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 173067 173462 . - . utg212_pilon exonerate:protein2genome:local exon 173067 173462 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 173067 173462 384 - . alignment_id 0 ; Query GL50803_19245-t26_1-p1 ; Align 173463 2 396 utg731_pilon exonerate:protein2genome:local gene 687289 687598 196 - . gene_id 0 ; sequence GL50803_19257-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 687289 687598 . - . utg731_pilon exonerate:protein2genome:local exon 687289 687598 . - . insertions 3 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 687289 687598 196 - . alignment_id 0 ; Query GL50803_19257-t26_1-p1 ; Align 687599 1 42 ; Align 687556 15 42 ; Align 687511 29 222 utg731_pilon exonerate:protein2genome:local gene 686988 687440 715 + . gene_id 0 ; sequence GL50803_19259-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 686988 687440 . + . utg731_pilon exonerate:protein2genome:local exon 686988 687440 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 686988 687440 715 + . alignment_id 0 ; Query GL50803_19259-t26_1-p1 ; Align 686988 4 453 utg731_pilon exonerate:protein2genome:local gene 403552 403884 463 - . gene_id 0 ; sequence GL50803_19271-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 403552 403884 . - . utg731_pilon exonerate:protein2genome:local exon 403552 403884 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 403552 403884 463 - . alignment_id 0 ; Query GL50803_19271-t26_1-p1 ; Align 403885 1 333 utg349_pilon exonerate:protein2genome:local gene 202958 322732 209 + . gene_id 0 ; sequence GL50803_19276-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 202958 203144 . + . utg349_pilon exonerate:protein2genome:local exon 202958 203144 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 203145 203146 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 203145 322652 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 322651 322652 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 322653 322732 . + . utg349_pilon exonerate:protein2genome:local exon 322653 322732 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 202958 322732 209 + . alignment_id 0 ; Query GL50803_19276-t26_1-p1 ; Align 202958 19 186 ; Align 322655 82 78 utg349_pilon exonerate:protein2genome:local gene 193956 194328 357 - . gene_id 0 ; sequence GL50803_19280-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 193956 194328 . - . utg349_pilon exonerate:protein2genome:local exon 193956 194328 . - . insertions 6 ; deletions 0 ; frameshifts 4 utg349_pilon exonerate:protein2genome:local similarity 193956 194328 357 - . alignment_id 0 ; Query GL50803_19280-t26_1-p1 ; Align 194329 1 273 ; Align 194052 92 12 ; Align 194034 96 78 utg349_pilon exonerate:protein2genome:local gene 114736 115182 516 + . gene_id 0 ; sequence GL50803_19294-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 114736 115182 . + . utg349_pilon exonerate:protein2genome:local exon 114736 115182 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 114736 115182 516 + . alignment_id 0 ; Query GL50803_19294-t26_1-p1 ; Align 114736 35 447 utg64_pilon exonerate:protein2genome:local gene 737592 737999 309 + . gene_id 0 ; sequence GL50803_19299-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 737592 737999 . + . utg64_pilon exonerate:protein2genome:local exon 737592 737999 . + . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 737592 737999 309 + . alignment_id 0 ; Query GL50803_19299-t26_1-p1 ; Align 737592 1 201 ; Align 737793 70 207 utg731_pilon exonerate:protein2genome:local gene 813215 813496 215 - . gene_id 0 ; sequence GL50803_19318-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 813215 813496 . - . utg731_pilon exonerate:protein2genome:local exon 813215 813496 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 813215 813496 215 - . alignment_id 0 ; Query GL50803_19318-t26_1-p1 ; Align 813497 6 282 utg308_pilon exonerate:protein2genome:local gene 702215 702499 173 - . gene_id 0 ; sequence GL50803_19323-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 702215 702499 . - . utg308_pilon exonerate:protein2genome:local exon 702215 702499 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 702215 702499 173 - . alignment_id 0 ; Query GL50803_19323-t26_1-p1 ; Align 702500 6 285 utg308_pilon exonerate:protein2genome:local gene 697223 697675 426 - . gene_id 0 ; sequence GL50803_19324-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 697223 697675 . - . utg308_pilon exonerate:protein2genome:local exon 697223 697675 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 697223 697675 426 - . alignment_id 0 ; Query GL50803_19324-t26_1-p1 ; Align 697676 1 453 utg308_pilon exonerate:protein2genome:local gene 693006 693346 218 - . gene_id 0 ; sequence GL50803_19325-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 693006 693346 . - . utg308_pilon exonerate:protein2genome:local exon 693006 693346 . - . insertions 3 ; deletions 0 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 693006 693346 218 - . alignment_id 0 ; Query GL50803_19325-t26_1-p1 ; Align 693347 1 111 ; Align 693234 38 90 ; Align 693141 68 135 utg349_pilon exonerate:protein2genome:local gene 397394 397645 297 - . gene_id 0 ; sequence GL50803_19337-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 397394 397645 . - . utg349_pilon exonerate:protein2genome:local exon 397394 397645 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 397394 397645 297 - . alignment_id 0 ; Query GL50803_19337-t26_1-p1 ; Align 397646 45 42 ; Align 397604 60 210 utg18_pilon exonerate:protein2genome:local gene 193332 194729 1930 - . gene_id 0 ; sequence GL50803_1935-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 193332 194729 . - . utg18_pilon exonerate:protein2genome:local exon 193332 194729 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 193332 194729 1930 - . alignment_id 0 ; Query GL50803_1935-t26_1-p1 ; Align 194730 1 1398 utg25666_pilon exonerate:protein2genome:local gene 6642 6932 191 + . gene_id 0 ; sequence GL50803_19351-t26_1-p1 ; gene_orientation . utg25666_pilon exonerate:protein2genome:local cds 6642 6932 . + . utg25666_pilon exonerate:protein2genome:local exon 6642 6932 . + . insertions 0 ; deletions 4 utg25666_pilon exonerate:protein2genome:local similarity 6642 6932 191 + . alignment_id 0 ; Query GL50803_19351-t26_1-p1 ; Align 6642 2 150 ; Align 6792 56 141 utg47_pilon exonerate:protein2genome:local gene 1545262 1545612 462 - . gene_id 0 ; sequence GL50803_19364-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1545262 1545612 . - . utg47_pilon exonerate:protein2genome:local exon 1545262 1545612 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1545262 1545612 462 - . alignment_id 0 ; Query GL50803_19364-t26_1-p1 ; Align 1545613 1 351 utg308_pilon exonerate:protein2genome:local gene 960147 960419 420 + . gene_id 0 ; sequence GL50803_1937-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 960147 960419 . + . utg308_pilon exonerate:protein2genome:local exon 960147 960419 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 960147 960419 420 + . alignment_id 0 ; Query GL50803_1937-t26_1-p1 ; Align 960147 1 273 utg731_pilon exonerate:protein2genome:local gene 771591 772059 384 + . gene_id 0 ; sequence GL50803_19377-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 771591 772059 . + . utg731_pilon exonerate:protein2genome:local exon 771591 772059 . + . insertions 3 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 771591 772059 384 + . alignment_id 0 ; Query GL50803_19377-t26_1-p1 ; Align 771591 9 117 ; Align 771709 48 201 ; Align 771913 115 147 utg731_pilon exonerate:protein2genome:local gene 765502 765943 529 + . gene_id 0 ; sequence GL50803_19378-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 765502 765943 . + . utg731_pilon exonerate:protein2genome:local exon 765502 765943 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 765502 765943 529 + . alignment_id 0 ; Query GL50803_19378-t26_1-p1 ; Align 765502 1 63 ; Align 765566 22 378 utg731_pilon exonerate:protein2genome:local gene 756734 757147 514 + . gene_id 0 ; sequence GL50803_19381-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 756734 757147 . + . utg731_pilon exonerate:protein2genome:local exon 756734 757147 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 756734 757147 514 + . alignment_id 0 ; Query GL50803_19381-t26_1-p1 ; Align 756734 3 414 utg731_pilon exonerate:protein2genome:local gene 754256 754684 288 + . gene_id 0 ; sequence GL50803_19382-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 754256 754684 . + . utg731_pilon exonerate:protein2genome:local exon 754256 754684 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 754256 754684 288 + . alignment_id 0 ; Query GL50803_19382-t26_1-p1 ; Align 754256 3 429 utg212_pilon exonerate:protein2genome:local gene 500488 500631 186 - . gene_id 0 ; sequence GL50803_19387-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 500488 500631 . - . utg212_pilon exonerate:protein2genome:local exon 500488 500631 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 500488 500631 186 - . alignment_id 0 ; Query GL50803_19387-t26_1-p1 ; Align 500632 1 144 utg212_pilon exonerate:protein2genome:local gene 498834 499108 250 - . gene_id 0 ; sequence GL50803_19388-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 498834 499108 . - . utg212_pilon exonerate:protein2genome:local exon 498834 499108 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 498834 499108 250 - . alignment_id 0 ; Query GL50803_19388-t26_1-p1 ; Align 499109 22 150 ; Align 498957 73 123 utg212_pilon exonerate:protein2genome:local gene 498732 499120 491 + . gene_id 0 ; sequence GL50803_19389-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 498732 499120 . + . utg212_pilon exonerate:protein2genome:local exon 498732 499120 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 498732 499120 491 + . alignment_id 0 ; Query GL50803_19389-t26_1-p1 ; Align 498732 1 225 ; Align 498959 76 3 ; Align 498962 78 159 utg11_pilon exonerate:protein2genome:local gene 347441 347876 262 + . gene_id 0 ; sequence GL50803_19430-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 347441 347876 . + . utg11_pilon exonerate:protein2genome:local exon 347441 347876 . + . insertions 6 ; deletions 0 ; frameshifts 4 utg11_pilon exonerate:protein2genome:local similarity 347441 347876 262 + . alignment_id 0 ; Query GL50803_19430-t26_1-p1 ; Align 347441 1 207 ; Align 347652 70 72 ; Align 347730 94 147 utg308_pilon exonerate:protein2genome:local gene 710561 710863 390 + . gene_id 0 ; sequence GL50803_19432-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 710561 710863 . + . utg308_pilon exonerate:protein2genome:local exon 710561 710863 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 710561 710863 390 + . alignment_id 0 ; Query GL50803_19432-t26_1-p1 ; Align 710561 1 303 utg308_pilon exonerate:protein2genome:local gene 730639 730939 208 + . gene_id 0 ; sequence GL50803_19434-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 730639 730939 . + . utg308_pilon exonerate:protein2genome:local exon 730639 730939 . + . insertions 0 ; deletions 2 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 730639 730939 208 + . alignment_id 0 ; Query GL50803_19434-t26_1-p1 ; Align 730639 2 210 ; Align 730850 72 12 ; Align 730862 78 78 utg308_pilon exonerate:protein2genome:local gene 736327 737031 1197 + . gene_id 0 ; sequence GL50803_19436-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 736327 737031 . + . utg308_pilon exonerate:protein2genome:local exon 736327 737031 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 736327 737031 1197 + . alignment_id 0 ; Query GL50803_19436-t26_1-p1 ; Align 736327 1 705 utg11_pilon exonerate:protein2genome:local gene 909314 939204 266 + . gene_id 0 ; sequence GL50803_19445-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 909314 909472 . + . utg11_pilon exonerate:protein2genome:local exon 909314 909472 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 909473 909474 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 909473 939111 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 939110 939111 . + . intron_id 0 ; splice_site "CA" utg11_pilon exonerate:protein2genome:local cds 939112 939204 . + . utg11_pilon exonerate:protein2genome:local exon 939112 939204 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 909314 939204 266 + . alignment_id 0 ; Query GL50803_19445-t26_1-p1 ; Align 909314 42 159 ; Align 939112 95 93 utg18_pilon exonerate:protein2genome:local gene 429258 429698 378 + . gene_id 0 ; sequence GL50803_19470-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 429258 429698 . + . utg18_pilon exonerate:protein2genome:local exon 429258 429698 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 429258 429698 378 + . alignment_id 0 ; Query GL50803_19470-t26_1-p1 ; Align 429258 1 441 utg47_pilon exonerate:protein2genome:local gene 733734 734096 428 - . gene_id 0 ; sequence GL50803_19478-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 733734 734096 . - . utg47_pilon exonerate:protein2genome:local exon 733734 734096 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 733734 734096 428 - . alignment_id 0 ; Query GL50803_19478-t26_1-p1 ; Align 734097 1 363 utg47_pilon exonerate:protein2genome:local gene 758479 758827 381 - . gene_id 0 ; sequence GL50803_19484-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 758479 758827 . - . utg47_pilon exonerate:protein2genome:local exon 758479 758827 . - . insertions 0 ; deletions 2 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 758479 758827 381 - . alignment_id 0 ; Query GL50803_19484-t26_1-p1 ; Align 758828 1 63 ; Align 758764 22 30 ; Align 758734 34 255 utg212_pilon exonerate:protein2genome:local gene 14224 164336 404 - . gene_id 0 ; sequence GL50803_19490-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 164213 164336 . - . utg212_pilon exonerate:protein2genome:local exon 164213 164336 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 164211 164212 . - . intron_id 1 ; splice_site "CT" utg212_pilon exonerate:protein2genome:local intron 115936 164212 . - . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115936 115937 . - . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115727 115935 . - . utg212_pilon exonerate:protein2genome:local exon 115727 115935 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 115725 115726 . - . intron_id 2 ; splice_site "CC" utg212_pilon exonerate:protein2genome:local intron 14431 115726 . - . intron_id 2 utg212_pilon exonerate:protein2genome:local splice3 14431 14432 . - . intron_id 1 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 14224 14430 . - . utg212_pilon exonerate:protein2genome:local exon 14224 14430 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14224 164336 404 - . alignment_id 0 ; Query GL50803_19490-t26_1-p1 ; Align 164337 1 123 ; Align 115934 43 207 ; Align 14431 112 207 utg11_pilon exonerate:protein2genome:local gene 602202 602531 293 - . gene_id 0 ; sequence GL50803_19499-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 602202 602531 . - . utg11_pilon exonerate:protein2genome:local exon 602202 602531 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 602202 602531 293 - . alignment_id 0 ; Query GL50803_19499-t26_1-p1 ; Align 602532 1 330 utg47_pilon exonerate:protein2genome:local gene 881682 882227 526 - . gene_id 0 ; sequence GL50803_19502-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 881682 882227 . - . utg47_pilon exonerate:protein2genome:local exon 881682 882227 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 881682 882227 526 - . alignment_id 0 ; Query GL50803_19502-t26_1-p1 ; Align 882228 18 546 utg47_pilon exonerate:protein2genome:local gene 897703 898104 467 - . gene_id 0 ; sequence GL50803_19508-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 897703 898104 . - . utg47_pilon exonerate:protein2genome:local exon 897703 898104 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 897703 898104 467 - . alignment_id 0 ; Query GL50803_19508-t26_1-p1 ; Align 898105 2 402 utg47_pilon exonerate:protein2genome:local gene 897806 898114 385 + . gene_id 0 ; sequence GL50803_19509-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 897806 898114 . + . utg47_pilon exonerate:protein2genome:local exon 897806 898114 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 897806 898114 385 + . alignment_id 0 ; Query GL50803_19509-t26_1-p1 ; Align 897806 1 309 utg47_pilon exonerate:protein2genome:local gene 2020143 2020265 104 + . gene_id 0 ; sequence GL50803_19515-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2020143 2020265 . + . utg47_pilon exonerate:protein2genome:local exon 2020143 2020265 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2020143 2020265 104 + . alignment_id 0 ; Query GL50803_19515-t26_1-p1 ; Align 2020143 1 123 utg349_pilon exonerate:protein2genome:local gene 1113816 1113938 104 - . gene_id 0 ; sequence GL50803_19515-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1113816 1113938 . - . utg349_pilon exonerate:protein2genome:local exon 1113816 1113938 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1113816 1113938 104 - . alignment_id 0 ; Query GL50803_19515-t26_1-p1 ; Align 1113939 1 123 utg47_pilon exonerate:protein2genome:local gene 1992474 1992797 157 + . gene_id 0 ; sequence GL50803_19524-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1992474 1992797 . + . utg47_pilon exonerate:protein2genome:local exon 1992474 1992797 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1992474 1992797 157 + . alignment_id 0 ; Query GL50803_19524-t26_1-p1 ; Align 1992474 27 324 utg349_pilon exonerate:protein2genome:local gene 1664590 1664910 309 + . gene_id 0 ; sequence GL50803_19546-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1664590 1664910 . + . utg349_pilon exonerate:protein2genome:local exon 1664590 1664910 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1664590 1664910 309 + . alignment_id 0 ; Query GL50803_19546-t26_1-p1 ; Align 1664590 1 321 utg64_pilon exonerate:protein2genome:local gene 551096 551360 147 - . gene_id 0 ; sequence GL50803_19575-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 551096 551360 . - . utg64_pilon exonerate:protein2genome:local exon 551096 551360 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 551096 551360 147 - . alignment_id 0 ; Query GL50803_19575-t26_1-p1 ; Align 551361 2 144 ; Align 551216 50 120 utg265_pilon exonerate:protein2genome:local gene 507839 603213 547 - . gene_id 0 ; sequence GL50803_19584-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 602687 603213 . - . utg265_pilon exonerate:protein2genome:local exon 602687 603213 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local splice5 602685 602686 . - . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 507862 602686 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 507862 507863 . - . intron_id 0 ; splice_site "AC" utg265_pilon exonerate:protein2genome:local cds 507839 507861 . - . utg265_pilon exonerate:protein2genome:local exon 507839 507861 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 507839 603213 547 - . alignment_id 0 ; Query GL50803_19584-t26_1-p1 ; Align 603214 3 504 ; Align 602709 171 21 ; Align 507860 179 21 utg265_pilon exonerate:protein2genome:local gene 607038 607325 365 + . gene_id 0 ; sequence GL50803_19585-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 607038 607325 . + . utg265_pilon exonerate:protein2genome:local exon 607038 607325 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 607038 607325 365 + . alignment_id 0 ; Query GL50803_19585-t26_1-p1 ; Align 607038 1 288 utg64_pilon exonerate:protein2genome:local gene 316529 316691 172 + . gene_id 0 ; sequence GL50803_19590-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 316529 316691 . + . utg64_pilon exonerate:protein2genome:local exon 316529 316691 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 316529 316691 172 + . alignment_id 0 ; Query GL50803_19590-t26_1-p1 ; Align 316529 1 120 ; Align 316650 41 42 utg349_pilon exonerate:protein2genome:local gene 359499 359774 269 + . gene_id 0 ; sequence GL50803_19598-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 359499 359774 . + . utg349_pilon exonerate:protein2genome:local exon 359499 359774 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 359499 359774 269 + . alignment_id 0 ; Query GL50803_19598-t26_1-p1 ; Align 359499 19 276 utg212_pilon exonerate:protein2genome:local gene 381221 381478 212 - . gene_id 0 ; sequence GL50803_19614-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 381221 381478 . - . utg212_pilon exonerate:protein2genome:local exon 381221 381478 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 381221 381478 212 - . alignment_id 0 ; Query GL50803_19614-t26_1-p1 ; Align 381479 12 258 utg212_pilon exonerate:protein2genome:local gene 350216 350590 503 + . gene_id 0 ; sequence GL50803_19620-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 350216 350590 . + . utg212_pilon exonerate:protein2genome:local exon 350216 350590 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 350216 350590 503 + . alignment_id 0 ; Query GL50803_19620-t26_1-p1 ; Align 350216 1 375 utg212_pilon exonerate:protein2genome:local gene 337989 338348 200 - . gene_id 0 ; sequence GL50803_19621-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 337989 338348 . - . utg212_pilon exonerate:protein2genome:local exon 337989 338348 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 337989 338348 200 - . alignment_id 0 ; Query GL50803_19621-t26_1-p1 ; Align 338349 1 360 utg11_pilon exonerate:protein2genome:local gene 119396 119701 220 + . gene_id 0 ; sequence GL50803_19628-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 119396 119701 . + . utg11_pilon exonerate:protein2genome:local exon 119396 119701 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 119396 119701 220 + . alignment_id 0 ; Query GL50803_19628-t26_1-p1 ; Align 119396 1 240 ; Align 119639 81 63 utg11_pilon exonerate:protein2genome:local gene 142169 142765 620 + . gene_id 0 ; sequence GL50803_19631-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 142169 142765 . + . utg11_pilon exonerate:protein2genome:local exon 142169 142765 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 142169 142765 620 + . alignment_id 0 ; Query GL50803_19631-t26_1-p1 ; Align 142169 1 597 utg11_pilon exonerate:protein2genome:local gene 145091 145723 672 - . gene_id 0 ; sequence GL50803_19633-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 145091 145723 . - . utg11_pilon exonerate:protein2genome:local exon 145091 145723 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 145091 145723 672 - . alignment_id 0 ; Query GL50803_19633-t26_1-p1 ; Align 145724 1 633 utg11_pilon exonerate:protein2genome:local gene 160358 160651 151 + . gene_id 0 ; sequence GL50803_19634-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 160358 160651 . + . utg11_pilon exonerate:protein2genome:local exon 160358 160651 . + . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 160358 160651 151 + . alignment_id 0 ; Query GL50803_19634-t26_1-p1 ; Align 160358 8 54 ; Align 160412 27 102 ; Align 160517 61 135 utg11_pilon exonerate:protein2genome:local gene 1110440 1110724 195 + . gene_id 0 ; sequence GL50803_19642-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1110440 1110724 . + . utg11_pilon exonerate:protein2genome:local exon 1110440 1110724 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1110440 1110724 195 + . alignment_id 0 ; Query GL50803_19642-t26_1-p1 ; Align 1110440 7 285 utg11_pilon exonerate:protein2genome:local gene 1111375 1111707 382 + . gene_id 0 ; sequence GL50803_19643-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1111375 1111707 . + . utg11_pilon exonerate:protein2genome:local exon 1111375 1111707 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1111375 1111707 382 + . alignment_id 0 ; Query GL50803_19643-t26_1-p1 ; Align 1111375 4 333 utg731_pilon exonerate:protein2genome:local gene 308817 309143 288 + . gene_id 0 ; sequence GL50803_19663-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 308817 309143 . + . utg731_pilon exonerate:protein2genome:local exon 308817 309143 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 308817 309143 288 + . alignment_id 0 ; Query GL50803_19663-t26_1-p1 ; Align 308817 1 261 ; Align 309078 90 66 utg1966_pilon exonerate:protein2genome:local gene 156332 156655 228 - . gene_id 0 ; sequence GL50803_19670-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 156332 156655 . - . utg1966_pilon exonerate:protein2genome:local exon 156332 156655 . - . insertions 0 ; deletions 4 utg1966_pilon exonerate:protein2genome:local similarity 156332 156655 228 - . alignment_id 0 ; Query GL50803_19670-t26_1-p1 ; Align 156656 1 183 ; Align 156473 66 141 utg265_pilon exonerate:protein2genome:local gene 343532 343921 355 + . gene_id 0 ; sequence GL50803_19677-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 343532 343921 . + . utg265_pilon exonerate:protein2genome:local exon 343532 343921 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 343532 343921 355 + . alignment_id 0 ; Query GL50803_19677-t26_1-p1 ; Align 343532 13 390 utg1966_pilon exonerate:protein2genome:local gene 29025 29414 355 - . gene_id 0 ; sequence GL50803_19677-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 29025 29414 . - . utg1966_pilon exonerate:protein2genome:local exon 29025 29414 . - . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 29025 29414 355 - . alignment_id 0 ; Query GL50803_19677-t26_1-p1 ; Align 29415 13 390 utg265_pilon exonerate:protein2genome:local gene 364969 365220 283 + . gene_id 0 ; sequence GL50803_19678-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 364969 365220 . + . utg265_pilon exonerate:protein2genome:local exon 364969 365220 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 364969 365220 283 + . alignment_id 0 ; Query GL50803_19678-t26_1-p1 ; Align 364969 1 252 utg64_pilon exonerate:protein2genome:local gene 518457 518783 247 + . gene_id 0 ; sequence GL50803_19704-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 518457 518783 . + . utg64_pilon exonerate:protein2genome:local exon 518457 518783 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 518457 518783 247 + . alignment_id 0 ; Query GL50803_19704-t26_1-p1 ; Align 518457 1 96 ; Align 518553 34 231 utg11_pilon exonerate:protein2genome:local gene 441438 441596 127 + . gene_id 0 ; sequence GL50803_19713-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 441438 441596 . + . utg11_pilon exonerate:protein2genome:local exon 441438 441596 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 441438 441596 127 + . alignment_id 0 ; Query GL50803_19713-t26_1-p1 ; Align 441438 107 159 utg11_pilon exonerate:protein2genome:local gene 437499 437657 127 - . gene_id 0 ; sequence GL50803_19713-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 437499 437657 . - . utg11_pilon exonerate:protein2genome:local exon 437499 437657 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 437499 437657 127 - . alignment_id 0 ; Query GL50803_19713-t26_1-p1 ; Align 437658 107 159 utg731_pilon exonerate:protein2genome:local gene 354945 476944 272 - . gene_id 0 ; sequence GL50803_19731-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 476907 476944 . - . utg731_pilon exonerate:protein2genome:local exon 476907 476944 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 476905 476906 . - . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 355273 476906 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 355273 355274 . - . intron_id 0 ; splice_site "AA" utg731_pilon exonerate:protein2genome:local cds 354945 355272 . - . utg731_pilon exonerate:protein2genome:local exon 354945 355272 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 354945 476944 272 - . alignment_id 0 ; Query GL50803_19731-t26_1-p1 ; Align 476945 3 36 ; Align 355272 16 327 utg11_pilon exonerate:protein2genome:local gene 617400 617810 461 - . gene_id 0 ; sequence GL50803_19789-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 617400 617810 . - . utg11_pilon exonerate:protein2genome:local exon 617400 617810 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 617400 617810 461 - . alignment_id 0 ; Query GL50803_19789-t26_1-p1 ; Align 617811 1 411 utg731_pilon exonerate:protein2genome:local gene 1007754 1008332 822 - . gene_id 0 ; sequence GL50803_1979-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1007754 1008332 . - . utg731_pilon exonerate:protein2genome:local exon 1007754 1008332 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1007754 1008332 822 - . alignment_id 0 ; Query GL50803_1979-t26_1-p1 ; Align 1008333 1 579 utg265_pilon exonerate:protein2genome:local gene 860154 860552 463 - . gene_id 0 ; sequence GL50803_19808-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 860154 860552 . - . utg265_pilon exonerate:protein2genome:local exon 860154 860552 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 860154 860552 463 - . alignment_id 0 ; Query GL50803_19808-t26_1-p1 ; Align 860553 2 399 utg47_pilon exonerate:protein2genome:local gene 64615 64872 356 + . gene_id 0 ; sequence GL50803_19815-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 64615 64872 . + . utg47_pilon exonerate:protein2genome:local exon 64615 64872 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 64615 64872 356 + . alignment_id 0 ; Query GL50803_19815-t26_1-p1 ; Align 64615 37 258 utg731_pilon exonerate:protein2genome:local gene 1033944 1034807 1140 + . gene_id 0 ; sequence GL50803_19818-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1033944 1034807 . + . utg731_pilon exonerate:protein2genome:local exon 1033944 1034807 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1033944 1034807 1140 + . alignment_id 0 ; Query GL50803_19818-t26_1-p1 ; Align 1033944 1 864 utg731_pilon exonerate:protein2genome:local gene 1030408 1030527 155 - . gene_id 0 ; sequence GL50803_19820-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1030408 1030527 . - . utg731_pilon exonerate:protein2genome:local exon 1030408 1030527 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1030408 1030527 155 - . alignment_id 0 ; Query GL50803_19820-t26_1-p1 ; Align 1030528 1 120 utg308_pilon exonerate:protein2genome:local gene 279297 279554 413 + . gene_id 0 ; sequence GL50803_19833-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 279297 279554 . + . utg308_pilon exonerate:protein2genome:local exon 279297 279554 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 279297 279554 413 + . alignment_id 0 ; Query GL50803_19833-t26_1-p1 ; Align 279297 1 258 utg308_pilon exonerate:protein2genome:local gene 277688 278191 722 - . gene_id 0 ; sequence GL50803_19834-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 277688 278191 . - . utg308_pilon exonerate:protein2genome:local exon 277688 278191 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 277688 278191 722 - . alignment_id 0 ; Query GL50803_19834-t26_1-p1 ; Align 278192 23 504 utg64_pilon exonerate:protein2genome:local gene 766718 847651 373 + . gene_id 0 ; sequence GL50803_19838-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 766718 766915 . + . utg64_pilon exonerate:protein2genome:local exon 766718 766915 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 766916 766917 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 766916 847474 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 847473 847474 . + . intron_id 0 ; splice_site "AC" utg64_pilon exonerate:protein2genome:local cds 847475 847651 . + . utg64_pilon exonerate:protein2genome:local exon 847475 847651 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 766718 847651 373 + . alignment_id 0 ; Query GL50803_19838-t26_1-p1 ; Align 766718 13 198 ; Align 847475 79 177 utg212_pilon exonerate:protein2genome:local gene 294640 295108 488 - . gene_id 0 ; sequence GL50803_19844-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 294640 295108 . - . utg212_pilon exonerate:protein2genome:local exon 294640 295108 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 294640 295108 488 - . alignment_id 0 ; Query GL50803_19844-t26_1-p1 ; Align 295109 2 117 ; Align 294991 42 351 utg18_pilon exonerate:protein2genome:local gene 541435 541811 409 + . gene_id 0 ; sequence GL50803_19853-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 541435 541811 . + . utg18_pilon exonerate:protein2genome:local exon 541435 541811 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local similarity 541435 541811 409 + . alignment_id 0 ; Query GL50803_19853-t26_1-p1 ; Align 541435 1 243 ; Align 541680 82 132 utg18_pilon exonerate:protein2genome:local gene 536038 536436 335 + . gene_id 0 ; sequence GL50803_19854-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 536038 536436 . + . utg18_pilon exonerate:protein2genome:local exon 536038 536436 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 536038 536436 335 + . alignment_id 0 ; Query GL50803_19854-t26_1-p1 ; Align 536038 10 399 utg18_pilon exonerate:protein2genome:local gene 526863 527279 367 + . gene_id 0 ; sequence GL50803_19855-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 526863 527279 . + . utg18_pilon exonerate:protein2genome:local exon 526863 527279 . + . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 526863 527279 367 + . alignment_id 0 ; Query GL50803_19855-t26_1-p1 ; Align 526863 1 147 ; Align 527010 52 270 utg18_pilon exonerate:protein2genome:local gene 525040 525622 496 + . gene_id 0 ; sequence GL50803_19856-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 525040 525622 . + . utg18_pilon exonerate:protein2genome:local exon 525040 525622 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg18_pilon exonerate:protein2genome:local similarity 525040 525622 496 + . alignment_id 0 ; Query GL50803_19856-t26_1-p1 ; Align 525040 1 390 ; Align 525431 131 192 utg308_pilon exonerate:protein2genome:local gene 671409 671795 611 - . gene_id 0 ; sequence GL50803_19867-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 671409 671795 . - . utg308_pilon exonerate:protein2genome:local exon 671409 671795 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 671409 671795 611 - . alignment_id 0 ; Query GL50803_19867-t26_1-p1 ; Align 671796 1 387 utg308_pilon exonerate:protein2genome:local gene 680881 681246 480 - . gene_id 0 ; sequence GL50803_19870-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 680881 681246 . - . utg308_pilon exonerate:protein2genome:local exon 680881 681246 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 680881 681246 480 - . alignment_id 0 ; Query GL50803_19870-t26_1-p1 ; Align 681247 1 366 utg64_pilon exonerate:protein2genome:local gene 550341 550604 203 + . gene_id 0 ; sequence GL50803_19873-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 550341 550604 . + . utg64_pilon exonerate:protein2genome:local exon 550341 550604 . + . insertions 6 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 550341 550604 203 + . alignment_id 0 ; Query GL50803_19873-t26_1-p1 ; Align 550341 171 63 ; Align 550407 192 21 ; Align 550431 199 174 utg212_pilon exonerate:protein2genome:local gene 14263 115888 330 - . gene_id 0 ; sequence GL50803_19900-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 115734 115888 . - . utg212_pilon exonerate:protein2genome:local exon 115734 115888 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 115732 115733 . - . intron_id 1 ; splice_site "AT" utg212_pilon exonerate:protein2genome:local intron 14438 115733 . - . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 14438 14439 . - . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 14263 14437 . - . utg212_pilon exonerate:protein2genome:local exon 14263 14437 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14263 115888 330 - . alignment_id 0 ; Query GL50803_19900-t26_1-p1 ; Align 115889 6 153 ; Align 14437 58 174 utg99_pilon exonerate:protein2genome:local gene 330025 330315 229 + . gene_id 0 ; sequence GL50803_19904-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 330025 330315 . + . utg99_pilon exonerate:protein2genome:local exon 330025 330315 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 330025 330315 229 + . alignment_id 0 ; Query GL50803_19904-t26_1-p1 ; Align 330025 1 291 utg99_pilon exonerate:protein2genome:local gene 316933 317223 229 - . gene_id 0 ; sequence GL50803_19904-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 316933 317223 . - . utg99_pilon exonerate:protein2genome:local exon 316933 317223 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 316933 317223 229 - . alignment_id 0 ; Query GL50803_19904-t26_1-p1 ; Align 317224 1 291 utg212_pilon exonerate:protein2genome:local gene 150458 150748 229 - . gene_id 0 ; sequence GL50803_19904-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 150458 150748 . - . utg212_pilon exonerate:protein2genome:local exon 150458 150748 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 150458 150748 229 - . alignment_id 0 ; Query GL50803_19904-t26_1-p1 ; Align 150749 1 291 utg349_pilon exonerate:protein2genome:local gene 71615 72259 859 + . gene_id 0 ; sequence GL50803_19910-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 71615 72259 . + . utg349_pilon exonerate:protein2genome:local exon 71615 72259 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 71615 72259 859 + . alignment_id 0 ; Query GL50803_19910-t26_1-p1 ; Align 71615 1 564 ; Align 72182 189 78 utg308_pilon exonerate:protein2genome:local gene 406110 464092 141 - . gene_id 0 ; sequence GL50803_19913-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 463981 464092 . - . utg308_pilon exonerate:protein2genome:local exon 463981 464092 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 463979 463980 . - . intron_id 1 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 406175 463980 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 406175 406176 . - . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 406110 406174 . - . utg308_pilon exonerate:protein2genome:local exon 406110 406174 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 406110 464092 141 - . alignment_id 0 ; Query GL50803_19913-t26_1-p1 ; Align 464093 1 111 ; Align 406173 39 63 utg349_pilon exonerate:protein2genome:local gene 434490 434834 288 - . gene_id 0 ; sequence GL50803_19928-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 434490 434834 . - . utg349_pilon exonerate:protein2genome:local exon 434490 434834 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 434490 434834 288 - . alignment_id 0 ; Query GL50803_19928-t26_1-p1 ; Align 434835 1 345 utg349_pilon exonerate:protein2genome:local gene 480637 480942 261 + . gene_id 0 ; sequence GL50803_19938-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 480637 480942 . + . utg349_pilon exonerate:protein2genome:local exon 480637 480942 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 480637 480942 261 + . alignment_id 0 ; Query GL50803_19938-t26_1-p1 ; Align 480637 1 306 utg18_pilon exonerate:protein2genome:local gene 544399 544638 199 + . gene_id 0 ; sequence GL50803_19939-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 544399 544638 . + . utg18_pilon exonerate:protein2genome:local exon 544399 544638 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 544399 544638 199 + . alignment_id 0 ; Query GL50803_19939-t26_1-p1 ; Align 544399 1 240 utg265_pilon exonerate:protein2genome:local gene 482743 483393 1026 - . gene_id 0 ; sequence GL50803_1995-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 482743 483393 . - . utg265_pilon exonerate:protein2genome:local exon 482743 483393 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 482743 483393 1026 - . alignment_id 0 ; Query GL50803_1995-t26_1-p1 ; Align 483394 1 651 utg18_pilon exonerate:protein2genome:local gene 217287 217496 197 + . gene_id 0 ; sequence GL50803_19973-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 217287 217496 . + . utg18_pilon exonerate:protein2genome:local exon 217287 217496 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 217287 217496 197 + . alignment_id 0 ; Query GL50803_19973-t26_1-p1 ; Align 217287 36 210 utg18_pilon exonerate:protein2genome:local gene 215785 216063 200 + . gene_id 0 ; sequence GL50803_19974-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 215785 216063 . + . utg18_pilon exonerate:protein2genome:local exon 215785 216063 . + . insertions 0 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 215785 216063 200 + . alignment_id 0 ; Query GL50803_19974-t26_1-p1 ; Align 215785 1 123 ; Align 215908 43 156 utg64_pilon exonerate:protein2genome:local gene 666364 666828 598 + . gene_id 0 ; sequence GL50803_19999-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 666364 666828 . + . utg64_pilon exonerate:protein2genome:local exon 666364 666828 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 666364 666828 598 + . alignment_id 0 ; Query GL50803_19999-t26_1-p1 ; Align 666364 31 465 utg64_pilon exonerate:protein2genome:local gene 671420 671779 279 - . gene_id 0 ; sequence GL50803_20000-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 671420 671779 . - . utg64_pilon exonerate:protein2genome:local exon 671420 671779 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 671420 671779 279 - . alignment_id 0 ; Query GL50803_20000-t26_1-p1 ; Align 671780 5 360 utg64_pilon exonerate:protein2genome:local gene 681675 682109 388 - . gene_id 0 ; sequence GL50803_20001-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 681675 682109 . - . utg64_pilon exonerate:protein2genome:local exon 681675 682109 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 681675 682109 388 - . alignment_id 0 ; Query GL50803_20001-t26_1-p1 ; Align 682110 1 435 utg64_pilon exonerate:protein2genome:local gene 685928 686260 200 - . gene_id 0 ; sequence GL50803_20002-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 685928 686260 . - . utg64_pilon exonerate:protein2genome:local exon 685928 686260 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 685928 686260 200 - . alignment_id 0 ; Query GL50803_20002-t26_1-p1 ; Align 686261 12 333 utg64_pilon exonerate:protein2genome:local gene 688709 689041 248 - . gene_id 0 ; sequence GL50803_20003-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 688709 689041 . - . utg64_pilon exonerate:protein2genome:local exon 688709 689041 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 688709 689041 248 - . alignment_id 0 ; Query GL50803_20003-t26_1-p1 ; Align 689042 1 333 utg731_pilon exonerate:protein2genome:local gene 979092 979505 619 - . gene_id 0 ; sequence GL50803_20017-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 979092 979505 . - . utg731_pilon exonerate:protein2genome:local exon 979092 979505 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 979092 979505 619 - . alignment_id 0 ; Query GL50803_20017-t26_1-p1 ; Align 979506 1 414 utg731_pilon exonerate:protein2genome:local gene 982886 983686 1073 - . gene_id 0 ; sequence GL50803_20020-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 982886 983686 . - . utg731_pilon exonerate:protein2genome:local exon 982886 983686 . - . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 982886 983686 1073 - . alignment_id 0 ; Query GL50803_20020-t26_1-p1 ; Align 983687 1 174 ; Align 983510 59 489 ; Align 983015 222 129 utg731_pilon exonerate:protein2genome:local gene 991143 991532 576 - . gene_id 0 ; sequence GL50803_20023-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 991143 991532 . - . utg731_pilon exonerate:protein2genome:local exon 991143 991532 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 991143 991532 576 - . alignment_id 0 ; Query GL50803_20023-t26_1-p1 ; Align 991533 1 390 utg731_pilon exonerate:protein2genome:local gene 995987 996290 226 + . gene_id 0 ; sequence GL50803_20025-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 995987 996290 . + . utg731_pilon exonerate:protein2genome:local exon 995987 996290 . + . insertions 0 ; deletions 0 ; frameshifts 4 utg731_pilon exonerate:protein2genome:local similarity 995987 996290 226 + . alignment_id 0 ; Query GL50803_20025-t26_1-p1 ; Align 995987 1 153 ; Align 996144 52 147 utg47_pilon exonerate:protein2genome:local gene 1148253 1148357 117 + . gene_id 0 ; sequence GL50803_20030-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1148253 1148357 . + . utg47_pilon exonerate:protein2genome:local exon 1148253 1148357 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1148253 1148357 117 + . alignment_id 0 ; Query GL50803_20030-t26_1-p1 ; Align 1148253 67 105 utg47_pilon exonerate:protein2genome:local gene 1126604 1126900 257 + . gene_id 0 ; sequence GL50803_20032-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1126604 1126900 . + . utg47_pilon exonerate:protein2genome:local exon 1126604 1126900 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1126604 1126900 257 + . alignment_id 0 ; Query GL50803_20032-t26_1-p1 ; Align 1126604 4 297 utg47_pilon exonerate:protein2genome:local gene 1114893 1115282 481 - . gene_id 0 ; sequence GL50803_20034-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1114893 1115282 . - . utg47_pilon exonerate:protein2genome:local exon 1114893 1115282 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1114893 1115282 481 - . alignment_id 0 ; Query GL50803_20034-t26_1-p1 ; Align 1115283 2 390 utg47_pilon exonerate:protein2genome:local gene 1109787 1110135 240 + . gene_id 0 ; sequence GL50803_20035-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1109787 1110135 . + . utg47_pilon exonerate:protein2genome:local exon 1109787 1110135 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1109787 1110135 240 + . alignment_id 0 ; Query GL50803_20035-t26_1-p1 ; Align 1109787 1 213 ; Align 1110001 72 135 utg47_pilon exonerate:protein2genome:local gene 1106948 1107415 702 - . gene_id 0 ; sequence GL50803_20037-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1106948 1107415 . - . utg47_pilon exonerate:protein2genome:local exon 1106948 1107415 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1106948 1107415 702 - . alignment_id 0 ; Query GL50803_20037-t26_1-p1 ; Align 1107416 1 468 utg349_pilon exonerate:protein2genome:local gene 1188826 1189110 162 - . gene_id 0 ; sequence GL50803_20050-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1188826 1189110 . - . utg349_pilon exonerate:protein2genome:local exon 1188826 1189110 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 1188826 1189110 162 - . alignment_id 0 ; Query GL50803_20050-t26_1-p1 ; Align 1189111 7 129 ; Align 1188982 53 156 utg349_pilon exonerate:protein2genome:local gene 1215921 1216268 396 - . gene_id 0 ; sequence GL50803_20056-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1215921 1216268 . - . utg349_pilon exonerate:protein2genome:local exon 1215921 1216268 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1215921 1216268 396 - . alignment_id 0 ; Query GL50803_20056-t26_1-p1 ; Align 1216269 2 348 utg99_pilon exonerate:protein2genome:local gene 527712 528026 233 - . gene_id 0 ; sequence GL50803_20061-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 527712 528026 . - . utg99_pilon exonerate:protein2genome:local exon 527712 528026 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 527712 528026 233 - . alignment_id 0 ; Query GL50803_20061-t26_1-p1 ; Align 528027 2 315 utg99_pilon exonerate:protein2genome:local gene 517938 518462 696 + . gene_id 0 ; sequence GL50803_20066-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 517938 518462 . + . utg99_pilon exonerate:protein2genome:local exon 517938 518462 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 517938 518462 696 + . alignment_id 0 ; Query GL50803_20066-t26_1-p1 ; Align 517938 1 525 utg47_pilon exonerate:protein2genome:local gene 1063077 1063844 1262 - . gene_id 0 ; sequence GL50803_2007-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1063077 1063844 . - . utg47_pilon exonerate:protein2genome:local exon 1063077 1063844 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1063077 1063844 1262 - . alignment_id 0 ; Query GL50803_2007-t26_1-p1 ; Align 1063845 1 768 utg731_pilon exonerate:protein2genome:local gene 111589 112003 285 - . gene_id 0 ; sequence GL50803_20076-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 111589 112003 . - . utg731_pilon exonerate:protein2genome:local exon 111589 112003 . - . insertions 0 ; deletions 4 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 111589 112003 285 - . alignment_id 0 ; Query GL50803_20076-t26_1-p1 ; Align 112004 1 129 ; Align 111874 44 48 ; Align 111826 64 237 utg11_pilon exonerate:protein2genome:local gene 510096 510350 218 - . gene_id 0 ; sequence GL50803_20099-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 510096 510350 . - . utg11_pilon exonerate:protein2genome:local exon 510096 510350 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 510096 510350 218 - . alignment_id 0 ; Query GL50803_20099-t26_1-p1 ; Align 510351 1 255 utg64_pilon exonerate:protein2genome:local gene 460857 461507 906 + . gene_id 0 ; sequence GL50803_2010-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 460857 461507 . + . utg64_pilon exonerate:protein2genome:local exon 460857 461507 . + . insertions 0 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 460857 461507 906 + . alignment_id 0 ; Query GL50803_2010-t26_1-p1 ; Align 460857 1 204 ; Align 461061 70 63 ; Align 461124 94 384 utg11_pilon exonerate:protein2genome:local gene 435786 436121 366 + . gene_id 0 ; sequence GL50803_20107-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 435786 436121 . + . utg11_pilon exonerate:protein2genome:local exon 435786 436121 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 435786 436121 366 + . alignment_id 0 ; Query GL50803_20107-t26_1-p1 ; Align 435786 21 336 utg64_pilon exonerate:protein2genome:local gene 460493 460843 411 - . gene_id 0 ; sequence GL50803_2011-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 460493 460843 . - . utg64_pilon exonerate:protein2genome:local exon 460493 460843 . - . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 460493 460843 411 - . alignment_id 0 ; Query GL50803_2011-t26_1-p1 ; Align 460844 1 225 ; Align 460619 78 126 utg212_pilon exonerate:protein2genome:local gene 70909 71256 433 - . gene_id 0 ; sequence GL50803_20113-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 70909 71256 . - . utg212_pilon exonerate:protein2genome:local exon 70909 71256 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 70909 71256 433 - . alignment_id 0 ; Query GL50803_20113-t26_1-p1 ; Align 71257 1 348 utg212_pilon exonerate:protein2genome:local gene 103581 103940 424 + . gene_id 0 ; sequence GL50803_20118-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 103581 103940 . + . utg212_pilon exonerate:protein2genome:local exon 103581 103940 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 103581 103940 424 + . alignment_id 0 ; Query GL50803_20118-t26_1-p1 ; Align 103581 1 360 utg64_pilon exonerate:protein2genome:local gene 459995 460402 619 + . gene_id 0 ; sequence GL50803_2012-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 459995 460402 . + . utg64_pilon exonerate:protein2genome:local exon 459995 460402 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 459995 460402 619 + . alignment_id 0 ; Query GL50803_2012-t26_1-p1 ; Align 459995 5 408 utg64_pilon exonerate:protein2genome:local gene 459179 459769 900 - . gene_id 0 ; sequence GL50803_2013-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 459179 459769 . - . utg64_pilon exonerate:protein2genome:local exon 459179 459769 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 459179 459769 900 - . alignment_id 0 ; Query GL50803_2013-t26_1-p1 ; Align 459770 6 591 utg99_pilon exonerate:protein2genome:local gene 111205 111549 420 - . gene_id 0 ; sequence GL50803_20134-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 111205 111549 . - . utg99_pilon exonerate:protein2genome:local exon 111205 111549 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 111205 111549 420 - . alignment_id 0 ; Query GL50803_20134-t26_1-p1 ; Align 111550 1 345 utg99_pilon exonerate:protein2genome:local gene 57720 58235 744 - . gene_id 0 ; sequence GL50803_20137-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 57720 58235 . - . utg99_pilon exonerate:protein2genome:local exon 57720 58235 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 57720 58235 744 - . alignment_id 0 ; Query GL50803_20137-t26_1-p1 ; Align 58236 1 516 utg64_pilon exonerate:protein2genome:local gene 458014 459138 1840 + . gene_id 0 ; sequence GL50803_2014-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 458014 459138 . + . utg64_pilon exonerate:protein2genome:local exon 458014 459138 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 458014 459138 1840 + . alignment_id 0 ; Query GL50803_2014-t26_1-p1 ; Align 458014 1 1125 utg99_pilon exonerate:protein2genome:local gene 64552 64725 196 + . gene_id 0 ; sequence GL50803_20140-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 64552 64725 . + . utg99_pilon exonerate:protein2genome:local exon 64552 64725 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 64552 64725 196 + . alignment_id 0 ; Query GL50803_20140-t26_1-p1 ; Align 64552 45 174 utg349_pilon exonerate:protein2genome:local gene 270159 270545 421 - . gene_id 0 ; sequence GL50803_20153-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 270159 270545 . - . utg349_pilon exonerate:protein2genome:local exon 270159 270545 . - . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 270159 270545 421 - . alignment_id 0 ; Query GL50803_20153-t26_1-p1 ; Align 270546 1 141 ; Align 270405 50 246 utg349_pilon exonerate:protein2genome:local gene 292121 292267 111 + . gene_id 0 ; sequence GL50803_20157-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 292121 292267 . + . utg349_pilon exonerate:protein2genome:local exon 292121 292267 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 292121 292267 111 + . alignment_id 0 ; Query GL50803_20157-t26_1-p1 ; Align 292121 103 147 utg11_pilon exonerate:protein2genome:local gene 909317 939204 274 + . gene_id 0 ; sequence GL50803_20165-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 909317 909472 . + . utg11_pilon exonerate:protein2genome:local exon 909317 909472 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 909473 909474 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 909473 939111 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 939110 939111 . + . intron_id 0 ; splice_site "CA" utg11_pilon exonerate:protein2genome:local cds 939112 939204 . + . utg11_pilon exonerate:protein2genome:local exon 939112 939204 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 909317 939204 274 + . alignment_id 0 ; Query GL50803_20165-t26_1-p1 ; Align 909317 16 156 ; Align 939112 68 93 utg99_pilon exonerate:protein2genome:local gene 207956 208326 396 + . gene_id 0 ; sequence GL50803_20167-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 207956 208326 . + . utg99_pilon exonerate:protein2genome:local exon 207956 208326 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg99_pilon exonerate:protein2genome:local similarity 207956 208326 396 + . alignment_id 0 ; Query GL50803_20167-t26_1-p1 ; Align 207956 1 342 ; Align 208300 115 27 utg99_pilon exonerate:protein2genome:local gene 204751 205110 293 + . gene_id 0 ; sequence GL50803_20168-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 204751 205110 . + . utg99_pilon exonerate:protein2genome:local exon 204751 205110 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 204751 205110 293 + . alignment_id 0 ; Query GL50803_20168-t26_1-p1 ; Align 204751 3 360 utg99_pilon exonerate:protein2genome:local gene 203929 204250 378 + . gene_id 0 ; sequence GL50803_20170-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 203929 204250 . + . utg99_pilon exonerate:protein2genome:local exon 203929 204250 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg99_pilon exonerate:protein2genome:local similarity 203929 204250 378 + . alignment_id 0 ; Query GL50803_20170-t26_1-p1 ; Align 203929 4 150 ; Align 204080 54 171 utg99_pilon exonerate:protein2genome:local gene 466638 467059 336 + . gene_id 0 ; sequence GL50803_20179-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 466638 467059 . + . utg99_pilon exonerate:protein2genome:local exon 466638 467059 . + . insertions 0 ; deletions 1 ; frameshifts 5 utg99_pilon exonerate:protein2genome:local similarity 466638 467059 336 + . alignment_id 0 ; Query GL50803_20179-t26_1-p1 ; Align 466638 1 165 ; Align 466808 56 165 ; Align 466973 112 87 utg99_pilon exonerate:protein2genome:local gene 465486 466133 326 - . gene_id 0 ; sequence GL50803_20181-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 465950 466133 . - . utg99_pilon exonerate:protein2genome:local exon 465950 466133 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 465948 465949 . - . intron_id 1 ; splice_site "TT" utg99_pilon exonerate:protein2genome:local intron 465890 465949 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 465890 465891 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 465486 465889 . - . utg99_pilon exonerate:protein2genome:local exon 465486 465889 . - . insertions 0 ; deletions 3 utg99_pilon exonerate:protein2genome:local similarity 465486 466133 326 - . alignment_id 0 ; Query GL50803_20181-t26_1-p1 ; Align 466134 1 183 ; Align 465888 63 150 ; Align 465738 116 252 utg11_pilon exonerate:protein2genome:local gene 820401 820724 258 + . gene_id 0 ; sequence GL50803_20191-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 820401 820724 . + . utg11_pilon exonerate:protein2genome:local exon 820401 820724 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 820401 820724 258 + . alignment_id 0 ; Query GL50803_20191-t26_1-p1 ; Align 820401 1 84 ; Align 820485 30 240 utg11_pilon exonerate:protein2genome:local gene 812494 813288 1096 - . gene_id 0 ; sequence GL50803_20195-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 812494 813288 . - . utg11_pilon exonerate:protein2genome:local exon 812494 813288 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 812494 813288 1096 - . alignment_id 0 ; Query GL50803_20195-t26_1-p1 ; Align 813289 1 795 utg11_pilon exonerate:protein2genome:local gene 804904 805197 248 - . gene_id 0 ; sequence GL50803_20196-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 804904 805197 . - . utg11_pilon exonerate:protein2genome:local exon 804904 805197 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 804904 805197 248 - . alignment_id 0 ; Query GL50803_20196-t26_1-p1 ; Align 805198 1 294 utg349_pilon exonerate:protein2genome:local gene 1483271 1483600 246 + . gene_id 0 ; sequence GL50803_20214-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1483271 1483600 . + . utg349_pilon exonerate:protein2genome:local exon 1483271 1483600 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1483271 1483600 246 + . alignment_id 0 ; Query GL50803_20214-t26_1-p1 ; Align 1483271 5 330 utg349_pilon exonerate:protein2genome:local gene 1467149 1467598 460 - . gene_id 0 ; sequence GL50803_20216-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1467149 1467598 . - . utg349_pilon exonerate:protein2genome:local exon 1467149 1467598 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1467149 1467598 460 - . alignment_id 0 ; Query GL50803_20216-t26_1-p1 ; Align 1467599 1 450 utg731_pilon exonerate:protein2genome:local gene 271933 272232 425 + . gene_id 0 ; sequence GL50803_20232-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 271933 272232 . + . utg731_pilon exonerate:protein2genome:local exon 271933 272232 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 271933 272232 425 + . alignment_id 0 ; Query GL50803_20232-t26_1-p1 ; Align 271933 1 300 utg731_pilon exonerate:protein2genome:local gene 261043 261351 228 - . gene_id 0 ; sequence GL50803_20235-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 261043 261351 . - . utg731_pilon exonerate:protein2genome:local exon 261043 261351 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 261043 261351 228 - . alignment_id 0 ; Query GL50803_20235-t26_1-p1 ; Align 261352 1 309 utg47_pilon exonerate:protein2genome:local gene 660880 661328 333 - . gene_id 0 ; sequence GL50803_20250-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 660880 661328 . - . utg47_pilon exonerate:protein2genome:local exon 660880 661328 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 660880 661328 333 - . alignment_id 0 ; Query GL50803_20250-t26_1-p1 ; Align 661329 1 405 ; Align 660922 136 42 utg47_pilon exonerate:protein2genome:local gene 678905 679024 146 + . gene_id 0 ; sequence GL50803_20253-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 678905 679024 . + . utg47_pilon exonerate:protein2genome:local exon 678905 679024 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 678905 679024 146 + . alignment_id 0 ; Query GL50803_20253-t26_1-p1 ; Align 678905 107 120 utg349_pilon exonerate:protein2genome:local gene 1690272 1691023 368 + . gene_id 0 ; sequence GL50803_20260-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1690272 1690546 . + . utg349_pilon exonerate:protein2genome:local exon 1690272 1690546 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1690547 1690548 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1690547 1690800 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1690799 1690800 . + . intron_id 0 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 1690801 1691023 . + . utg349_pilon exonerate:protein2genome:local exon 1690801 1691023 . + . insertions 6 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1690272 1691023 368 + . alignment_id 0 ; Query GL50803_20260-t26_1-p1 ; Align 1690272 7 273 ; Align 1690802 99 153 ; Align 1690961 150 63 utg7494_pilon exonerate:protein2genome:local gene 9642 10394 368 + . gene_id 0 ; sequence GL50803_20260-t26_1-p1 ; gene_orientation + utg7494_pilon exonerate:protein2genome:local cds 9642 9916 . + . utg7494_pilon exonerate:protein2genome:local exon 9642 9916 . + . insertions 0 ; deletions 0 utg7494_pilon exonerate:protein2genome:local splice5 9917 9918 . + . intron_id 1 ; splice_site "GT" utg7494_pilon exonerate:protein2genome:local intron 9917 10171 . + . intron_id 1 utg7494_pilon exonerate:protein2genome:local splice3 10170 10171 . + . intron_id 0 ; splice_site "AA" utg7494_pilon exonerate:protein2genome:local cds 10172 10394 . + . utg7494_pilon exonerate:protein2genome:local exon 10172 10394 . + . insertions 6 ; deletions 0 utg7494_pilon exonerate:protein2genome:local similarity 9642 10394 368 + . alignment_id 0 ; Query GL50803_20260-t26_1-p1 ; Align 9642 7 273 ; Align 10173 99 153 ; Align 10332 150 63 utg47_pilon exonerate:protein2genome:local gene 1265347 1265766 626 - . gene_id 0 ; sequence GL50803_20276-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1265347 1265766 . - . utg47_pilon exonerate:protein2genome:local exon 1265347 1265766 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1265347 1265766 626 - . alignment_id 0 ; Query GL50803_20276-t26_1-p1 ; Align 1265767 1 420 utg47_pilon exonerate:protein2genome:local gene 1262011 1262355 180 - . gene_id 0 ; sequence GL50803_20277-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1262011 1262355 . - . utg47_pilon exonerate:protein2genome:local exon 1262011 1262355 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1262011 1262355 180 - . alignment_id 0 ; Query GL50803_20277-t26_1-p1 ; Align 1262356 1 345 utg47_pilon exonerate:protein2genome:local gene 1254167 1254460 329 + . gene_id 0 ; sequence GL50803_20278-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1254167 1254460 . + . utg47_pilon exonerate:protein2genome:local exon 1254167 1254460 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1254167 1254460 329 + . alignment_id 0 ; Query GL50803_20278-t26_1-p1 ; Align 1254167 1 294 utg11_pilon exonerate:protein2genome:local gene 1258790 1259137 370 + . gene_id 0 ; sequence GL50803_20289-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1258790 1259137 . + . utg11_pilon exonerate:protein2genome:local exon 1258790 1259137 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1258790 1259137 370 + . alignment_id 0 ; Query GL50803_20289-t26_1-p1 ; Align 1258790 2 237 ; Align 1259030 81 108 utg11_pilon exonerate:protein2genome:local gene 1230133 1230561 596 - . gene_id 0 ; sequence GL50803_20301-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1230133 1230561 . - . utg11_pilon exonerate:protein2genome:local exon 1230133 1230561 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1230133 1230561 596 - . alignment_id 0 ; Query GL50803_20301-t26_1-p1 ; Align 1230562 1 429 utg47_pilon exonerate:protein2genome:local gene 371221 371589 566 - . gene_id 0 ; sequence GL50803_20307-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 371221 371589 . - . utg47_pilon exonerate:protein2genome:local exon 371221 371589 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 371221 371589 566 - . alignment_id 0 ; Query GL50803_20307-t26_1-p1 ; Align 371590 1 369 utg47_pilon exonerate:protein2genome:local gene 353125 353589 409 + . gene_id 0 ; sequence GL50803_20311-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 353125 353589 . + . utg47_pilon exonerate:protein2genome:local exon 353125 353589 . + . insertions 9 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 353125 353589 409 + . alignment_id 0 ; Query GL50803_20311-t26_1-p1 ; Align 353125 6 210 ; Align 353344 76 246 utg99_pilon exonerate:protein2genome:local gene 244274 244693 479 + . gene_id 0 ; sequence GL50803_20315-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 244274 244693 . + . utg99_pilon exonerate:protein2genome:local exon 244274 244693 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 244274 244693 479 + . alignment_id 0 ; Query GL50803_20315-t26_1-p1 ; Align 244274 1 420 utg47_pilon exonerate:protein2genome:local gene 2247822 2248487 618 - . gene_id 0 ; sequence GL50803_20327-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2247822 2248487 . - . utg47_pilon exonerate:protein2genome:local exon 2247822 2248487 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2247822 2248487 618 - . alignment_id 0 ; Query GL50803_20327-t26_1-p1 ; Align 2248488 1 666 utg47_pilon exonerate:protein2genome:local gene 2247064 2247447 352 + . gene_id 0 ; sequence GL50803_20328-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2247064 2247447 . + . utg47_pilon exonerate:protein2genome:local exon 2247064 2247447 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2247064 2247447 352 + . alignment_id 0 ; Query GL50803_20328-t26_1-p1 ; Align 2247064 1 384 utg47_pilon exonerate:protein2genome:local gene 2228917 2229342 301 + . gene_id 0 ; sequence GL50803_20336-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2228917 2229342 . + . utg47_pilon exonerate:protein2genome:local exon 2228917 2229342 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2228917 2229342 301 + . alignment_id 0 ; Query GL50803_20336-t26_1-p1 ; Align 2228917 1 426 utg47_pilon exonerate:protein2genome:local gene 2224697 2225005 402 - . gene_id 0 ; sequence GL50803_20337-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2224697 2225005 . - . utg47_pilon exonerate:protein2genome:local exon 2224697 2225005 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2224697 2225005 402 - . alignment_id 0 ; Query GL50803_20337-t26_1-p1 ; Align 2225006 1 309 utg47_pilon exonerate:protein2genome:local gene 2219936 2220337 423 - . gene_id 0 ; sequence GL50803_20338-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2219936 2220337 . - . utg47_pilon exonerate:protein2genome:local exon 2219936 2220337 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2219936 2220337 423 - . alignment_id 0 ; Query GL50803_20338-t26_1-p1 ; Align 2220338 1 402 utg47_pilon exonerate:protein2genome:local gene 2214267 2214587 379 + . gene_id 0 ; sequence GL50803_20340-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2214267 2214587 . + . utg47_pilon exonerate:protein2genome:local exon 2214267 2214587 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2214267 2214587 379 + . alignment_id 0 ; Query GL50803_20340-t26_1-p1 ; Align 2214267 1 261 ; Align 2214528 89 60 utg47_pilon exonerate:protein2genome:local gene 2206411 2206737 279 + . gene_id 0 ; sequence GL50803_20341-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2206411 2206737 . + . utg47_pilon exonerate:protein2genome:local exon 2206411 2206737 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2206411 2206737 279 + . alignment_id 0 ; Query GL50803_20341-t26_1-p1 ; Align 2206411 1 327 utg731_pilon exonerate:protein2genome:local gene 855829 856150 261 - . gene_id 0 ; sequence GL50803_20348-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 855829 856150 . - . utg731_pilon exonerate:protein2genome:local exon 855829 856150 . - . insertions 6 ; deletions 0 ; frameshifts 4 utg731_pilon exonerate:protein2genome:local similarity 855829 856150 261 - . alignment_id 0 ; Query GL50803_20348-t26_1-p1 ; Align 856151 10 72 ; Align 856075 34 24 ; Align 856045 42 216 utg265_pilon exonerate:protein2genome:local gene 446707 446856 139 + . gene_id 0 ; sequence GL50803_20370-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 446707 446856 . + . utg265_pilon exonerate:protein2genome:local exon 446707 446856 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 446707 446856 139 + . alignment_id 0 ; Query GL50803_20370-t26_1-p1 ; Align 446707 4 150 utg11_pilon exonerate:protein2genome:local gene 696374 696730 326 + . gene_id 0 ; sequence GL50803_20386-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 696374 696730 . + . utg11_pilon exonerate:protein2genome:local exon 696374 696730 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 696374 696730 326 + . alignment_id 0 ; Query GL50803_20386-t26_1-p1 ; Align 696374 5 357 utg731_pilon exonerate:protein2genome:local gene 1514159 1514634 388 + . gene_id 0 ; sequence GL50803_20409-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1514159 1514634 . + . utg731_pilon exonerate:protein2genome:local exon 1514159 1514634 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 1514159 1514634 388 + . alignment_id 0 ; Query GL50803_20409-t26_1-p1 ; Align 1514159 1 381 ; Align 1514542 129 93 utg731_pilon exonerate:protein2genome:local gene 1545666 1546175 792 + . gene_id 0 ; sequence GL50803_20413-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1545666 1546175 . + . utg731_pilon exonerate:protein2genome:local exon 1545666 1546175 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1545666 1546175 792 + . alignment_id 0 ; Query GL50803_20413-t26_1-p1 ; Align 1545666 1 510 utg731_pilon exonerate:protein2genome:local gene 1568666 1568983 329 - . gene_id 0 ; sequence GL50803_20416-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1568666 1568983 . - . utg731_pilon exonerate:protein2genome:local exon 1568666 1568983 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1568666 1568983 329 - . alignment_id 0 ; Query GL50803_20416-t26_1-p1 ; Align 1568984 26 318 utg731_pilon exonerate:protein2genome:local gene 1468597 1468908 209 + . gene_id 0 ; sequence GL50803_20427-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1468597 1468908 . + . utg731_pilon exonerate:protein2genome:local exon 1468597 1468908 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1468597 1468908 209 + . alignment_id 0 ; Query GL50803_20427-t26_1-p1 ; Align 1468597 1 312 utg731_pilon exonerate:protein2genome:local gene 1458321 1458678 383 + . gene_id 0 ; sequence GL50803_20429-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1458321 1458678 . + . utg731_pilon exonerate:protein2genome:local exon 1458321 1458678 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 1458321 1458678 383 + . alignment_id 0 ; Query GL50803_20429-t26_1-p1 ; Align 1458321 1 243 ; Align 1458565 82 114 utg349_pilon exonerate:protein2genome:local gene 451662 451997 181 + . gene_id 0 ; sequence GL50803_20437-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 451662 451997 . + . utg349_pilon exonerate:protein2genome:local exon 451662 451997 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 451662 451997 181 + . alignment_id 0 ; Query GL50803_20437-t26_1-p1 ; Align 451662 9 336 utg64_pilon exonerate:protein2genome:local gene 799978 800283 390 - . gene_id 0 ; sequence GL50803_20445-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 799978 800283 . - . utg64_pilon exonerate:protein2genome:local exon 799978 800283 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 799978 800283 390 - . alignment_id 0 ; Query GL50803_20445-t26_1-p1 ; Align 800284 45 306 utg47_pilon exonerate:protein2genome:local gene 1445805 1446227 551 - . gene_id 0 ; sequence GL50803_20472-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1445805 1446227 . - . utg47_pilon exonerate:protein2genome:local exon 1445805 1446227 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1445805 1446227 551 - . alignment_id 0 ; Query GL50803_20472-t26_1-p1 ; Align 1446228 1 423 utg349_pilon exonerate:protein2genome:local gene 557899 558237 218 - . gene_id 0 ; sequence GL50803_20487-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 557899 558237 . - . utg349_pilon exonerate:protein2genome:local exon 557899 558237 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 557899 558237 218 - . alignment_id 0 ; Query GL50803_20487-t26_1-p1 ; Align 558238 2 339 utg349_pilon exonerate:protein2genome:local gene 585457 585618 139 + . gene_id 0 ; sequence GL50803_20489-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 585457 585618 . + . utg349_pilon exonerate:protein2genome:local exon 585457 585618 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 585457 585618 139 + . alignment_id 0 ; Query GL50803_20489-t26_1-p1 ; Align 585457 47 162 utg349_pilon exonerate:protein2genome:local gene 608806 609133 197 + . gene_id 0 ; sequence GL50803_20493-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 608806 609133 . + . utg349_pilon exonerate:protein2genome:local exon 608806 609133 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 608806 609133 197 + . alignment_id 0 ; Query GL50803_20493-t26_1-p1 ; Align 608806 1 39 ; Align 608846 14 288 utg349_pilon exonerate:protein2genome:local gene 609057 609476 503 + . gene_id 0 ; sequence GL50803_20494-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 609057 609476 . + . utg349_pilon exonerate:protein2genome:local exon 609057 609476 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 609057 609476 503 + . alignment_id 0 ; Query GL50803_20494-t26_1-p1 ; Align 609057 1 333 ; Align 609390 113 87 utg18_pilon exonerate:protein2genome:local gene 557508 557870 224 - . gene_id 0 ; sequence GL50803_20496-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 557508 557870 . - . utg18_pilon exonerate:protein2genome:local exon 557508 557870 . - . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 557508 557870 224 - . alignment_id 0 ; Query GL50803_20496-t26_1-p1 ; Align 557871 1 48 ; Align 557823 19 315 utg731_pilon exonerate:protein2genome:local gene 661596 661814 242 + . gene_id 0 ; sequence GL50803_20507-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 661596 661814 . + . utg731_pilon exonerate:protein2genome:local exon 661596 661814 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 661596 661814 242 + . alignment_id 0 ; Query GL50803_20507-t26_1-p1 ; Align 661596 65 219 utg731_pilon exonerate:protein2genome:local gene 589940 590170 225 - . gene_id 0 ; sequence GL50803_20517-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 589940 590170 . - . utg731_pilon exonerate:protein2genome:local exon 589940 590170 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 589940 590170 225 - . alignment_id 0 ; Query GL50803_20517-t26_1-p1 ; Align 590171 25 231 utg731_pilon exonerate:protein2genome:local gene 583122 583352 246 + . gene_id 0 ; sequence GL50803_20518-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 583122 583352 . + . utg731_pilon exonerate:protein2genome:local exon 583122 583352 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 583122 583352 246 + . alignment_id 0 ; Query GL50803_20518-t26_1-p1 ; Align 583122 47 231 utg64_pilon exonerate:protein2genome:local gene 956977 957273 277 - . gene_id 0 ; sequence GL50803_20529-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 956977 957273 . - . utg64_pilon exonerate:protein2genome:local exon 956977 957273 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 956977 957273 277 - . alignment_id 0 ; Query GL50803_20529-t26_1-p1 ; Align 957274 1 297 utg18_pilon exonerate:protein2genome:local gene 139660 140577 1610 + . gene_id 0 ; sequence GL50803_2053-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 139660 140577 . + . utg18_pilon exonerate:protein2genome:local exon 139660 140577 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 139660 140577 1610 + . alignment_id 0 ; Query GL50803_2053-t26_1-p1 ; Align 139660 1 918 utg64_pilon exonerate:protein2genome:local gene 1012227 1012637 481 - . gene_id 0 ; sequence GL50803_20539-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1012227 1012637 . - . utg64_pilon exonerate:protein2genome:local exon 1012227 1012637 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1012227 1012637 481 - . alignment_id 0 ; Query GL50803_20539-t26_1-p1 ; Align 1012638 1 411 utg308_pilon exonerate:protein2genome:local gene 316298 316743 737 - . gene_id 0 ; sequence GL50803_20551-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 316298 316743 . - . utg308_pilon exonerate:protein2genome:local exon 316298 316743 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 316298 316743 737 - . alignment_id 0 ; Query GL50803_20551-t26_1-p1 ; Align 316744 1 306 ; Align 316436 104 138 utg308_pilon exonerate:protein2genome:local gene 582266 582598 564 + . gene_id 0 ; sequence GL50803_20593-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 582266 582598 . + . utg308_pilon exonerate:protein2genome:local exon 582266 582598 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 582266 582598 564 + . alignment_id 0 ; Query GL50803_20593-t26_1-p1 ; Align 582266 1 333 utg308_pilon exonerate:protein2genome:local gene 582604 583668 1176 - . gene_id 0 ; sequence GL50803_20594-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 582604 583668 . - . utg308_pilon exonerate:protein2genome:local exon 582604 583668 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 582604 583668 1176 - . alignment_id 0 ; Query GL50803_20594-t26_1-p1 ; Align 583669 1 1065 utg349_pilon exonerate:protein2genome:local gene 1025750 1026028 261 + . gene_id 0 ; sequence GL50803_20601-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1025750 1026028 . + . utg349_pilon exonerate:protein2genome:local exon 1025750 1026028 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1025750 1026028 261 + . alignment_id 0 ; Query GL50803_20601-t26_1-p1 ; Align 1025750 12 279 utg349_pilon exonerate:protein2genome:local gene 1013959 1014471 691 - . gene_id 0 ; sequence GL50803_20603-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1013959 1014471 . - . utg349_pilon exonerate:protein2genome:local exon 1013959 1014471 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1013959 1014471 691 - . alignment_id 0 ; Query GL50803_20603-t26_1-p1 ; Align 1014472 1 513 utg349_pilon exonerate:protein2genome:local gene 1011793 1012188 515 + . gene_id 0 ; sequence GL50803_20605-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1011793 1012188 . + . utg349_pilon exonerate:protein2genome:local exon 1011793 1012188 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1011793 1012188 515 + . alignment_id 0 ; Query GL50803_20605-t26_1-p1 ; Align 1011793 9 396 utg349_pilon exonerate:protein2genome:local gene 976634 977383 684 + . gene_id 0 ; sequence GL50803_20613-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 976634 977383 . + . utg349_pilon exonerate:protein2genome:local exon 976634 977383 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 976634 977383 684 + . alignment_id 0 ; Query GL50803_20613-t26_1-p1 ; Align 976634 2 750 utg349_pilon exonerate:protein2genome:local gene 1399452 1399826 614 - . gene_id 0 ; sequence GL50803_20633-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1399452 1399826 . - . utg349_pilon exonerate:protein2genome:local exon 1399452 1399826 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1399452 1399826 614 - . alignment_id 0 ; Query GL50803_20633-t26_1-p1 ; Align 1399827 1 375 utg349_pilon exonerate:protein2genome:local gene 1286744 1287109 319 + . gene_id 0 ; sequence GL50803_20652-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1286744 1287109 . + . utg349_pilon exonerate:protein2genome:local exon 1286744 1287109 . + . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 1286744 1287109 319 + . alignment_id 0 ; Query GL50803_20652-t26_1-p1 ; Align 1286744 27 153 ; Align 1286897 81 213 utg308_pilon exonerate:protein2genome:local gene 200969 201387 480 + . gene_id 0 ; sequence GL50803_20666-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 200969 201387 . + . utg308_pilon exonerate:protein2genome:local exon 200969 201387 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 200969 201387 480 + . alignment_id 0 ; Query GL50803_20666-t26_1-p1 ; Align 200969 1 312 ; Align 201283 105 105 utg308_pilon exonerate:protein2genome:local gene 196626 197030 400 - . gene_id 0 ; sequence GL50803_20667-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 196626 197030 . - . utg308_pilon exonerate:protein2genome:local exon 196626 197030 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 196626 197030 400 - . alignment_id 0 ; Query GL50803_20667-t26_1-p1 ; Align 197031 4 405 utg18_pilon exonerate:protein2genome:local gene 177777 178667 436 + . gene_id 0 ; sequence GL50803_20672-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 177777 178667 . + . utg18_pilon exonerate:protein2genome:local exon 177777 178667 . + . insertions 6 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 177777 178667 436 + . alignment_id 0 ; Query GL50803_20672-t26_1-p1 ; Align 177777 17 24 ; Align 177801 26 282 ; Align 178086 120 183 ; Align 178272 181 396 utg25666_pilon exonerate:protein2genome:local gene 52226 52402 176 + . gene_id 0 ; sequence GL50803_20674-t26_1-p1 ; gene_orientation . utg25666_pilon exonerate:protein2genome:local cds 52226 52402 . + . utg25666_pilon exonerate:protein2genome:local exon 52226 52402 . + . insertions 0 ; deletions 0 utg25666_pilon exonerate:protein2genome:local similarity 52226 52402 176 + . alignment_id 0 ; Query GL50803_20674-t26_1-p1 ; Align 52226 16 177 utg25666_pilon exonerate:protein2genome:local gene 67544 67720 176 + . gene_id 0 ; sequence GL50803_20674-t26_1-p1 ; gene_orientation . utg25666_pilon exonerate:protein2genome:local cds 67544 67720 . + . utg25666_pilon exonerate:protein2genome:local exon 67544 67720 . + . insertions 0 ; deletions 0 utg25666_pilon exonerate:protein2genome:local similarity 67544 67720 176 + . alignment_id 0 ; Query GL50803_20674-t26_1-p1 ; Align 67544 16 177 utg308_pilon exonerate:protein2genome:local gene 130260 130640 544 - . gene_id 0 ; sequence GL50803_20686-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 130260 130640 . - . utg308_pilon exonerate:protein2genome:local exon 130260 130640 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 130260 130640 544 - . alignment_id 0 ; Query GL50803_20686-t26_1-p1 ; Align 130641 1 381 utg308_pilon exonerate:protein2genome:local gene 120148 120525 330 - . gene_id 0 ; sequence GL50803_20688-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 120148 120525 . - . utg308_pilon exonerate:protein2genome:local exon 120148 120525 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 120148 120525 330 - . alignment_id 0 ; Query GL50803_20688-t26_1-p1 ; Align 120526 1 231 ; Align 120292 78 144 utg308_pilon exonerate:protein2genome:local gene 116216 116626 428 + . gene_id 0 ; sequence GL50803_20689-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 116216 116626 . + . utg308_pilon exonerate:protein2genome:local exon 116216 116626 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 116216 116626 428 + . alignment_id 0 ; Query GL50803_20689-t26_1-p1 ; Align 116216 2 411 utg308_pilon exonerate:protein2genome:local gene 75645 75980 412 + . gene_id 0 ; sequence GL50803_20692-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 75645 75980 . + . utg308_pilon exonerate:protein2genome:local exon 75645 75980 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 75645 75980 412 + . alignment_id 0 ; Query GL50803_20692-t26_1-p1 ; Align 75645 1 336 utg308_pilon exonerate:protein2genome:local gene 21193 21600 492 - . gene_id 0 ; sequence GL50803_20702-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 21193 21600 . - . utg308_pilon exonerate:protein2genome:local exon 21193 21600 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 21193 21600 492 - . alignment_id 0 ; Query GL50803_20702-t26_1-p1 ; Align 21601 1 408 utg308_pilon exonerate:protein2genome:local gene 6796 7329 596 + . gene_id 0 ; sequence GL50803_20703-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 6796 7329 . + . utg308_pilon exonerate:protein2genome:local exon 6796 7329 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 6796 7329 596 + . alignment_id 0 ; Query GL50803_20703-t26_1-p1 ; Align 6796 1 534 utg47_pilon exonerate:protein2genome:local gene 232798 233190 348 + . gene_id 0 ; sequence GL50803_20722-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 232798 233190 . + . utg47_pilon exonerate:protein2genome:local exon 232798 233190 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 232798 233190 348 + . alignment_id 0 ; Query GL50803_20722-t26_1-p1 ; Align 232798 4 393 utg47_pilon exonerate:protein2genome:local gene 228555 228907 388 - . gene_id 0 ; sequence GL50803_20728-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 228555 228907 . - . utg47_pilon exonerate:protein2genome:local exon 228555 228907 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 228555 228907 388 - . alignment_id 0 ; Query GL50803_20728-t26_1-p1 ; Align 228908 9 291 ; Align 228615 106 60 utg47_pilon exonerate:protein2genome:local gene 203246 203551 426 - . gene_id 0 ; sequence GL50803_20730-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 203246 203551 . - . utg47_pilon exonerate:protein2genome:local exon 203246 203551 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 203246 203551 426 - . alignment_id 0 ; Query GL50803_20730-t26_1-p1 ; Align 203552 20 306 utg47_pilon exonerate:protein2genome:local gene 163449 163865 620 + . gene_id 0 ; sequence GL50803_20736-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 163449 163865 . + . utg47_pilon exonerate:protein2genome:local exon 163449 163865 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 163449 163865 620 + . alignment_id 0 ; Query GL50803_20736-t26_1-p1 ; Align 163449 1 417 utg47_pilon exonerate:protein2genome:local gene 161118 161411 301 - . gene_id 0 ; sequence GL50803_20737-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 161118 161411 . - . utg47_pilon exonerate:protein2genome:local exon 161118 161411 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 161118 161411 301 - . alignment_id 0 ; Query GL50803_20737-t26_1-p1 ; Align 161412 29 294 utg47_pilon exonerate:protein2genome:local gene 148856 149074 275 - . gene_id 0 ; sequence GL50803_20740-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 148856 149074 . - . utg47_pilon exonerate:protein2genome:local exon 148856 149074 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 148856 149074 275 - . alignment_id 0 ; Query GL50803_20740-t26_1-p1 ; Align 149075 1 192 ; Align 148880 65 24 utg47_pilon exonerate:protein2genome:local gene 142076 142435 326 + . gene_id 0 ; sequence GL50803_20742-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 142076 142435 . + . utg47_pilon exonerate:protein2genome:local exon 142076 142435 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 142076 142435 326 + . alignment_id 0 ; Query GL50803_20742-t26_1-p1 ; Align 142076 2 360 utg47_pilon exonerate:protein2genome:local gene 110662 111014 268 + . gene_id 0 ; sequence GL50803_20745-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 110662 111014 . + . utg47_pilon exonerate:protein2genome:local exon 110662 111014 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 110662 111014 268 + . alignment_id 0 ; Query GL50803_20745-t26_1-p1 ; Align 110662 1 189 ; Align 110853 64 27 ; Align 110880 75 135 utg18_pilon exonerate:protein2genome:local gene 544399 568764 194 + . gene_id 0 ; sequence GL50803_2075-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 544399 544667 . + . utg18_pilon exonerate:protein2genome:local exon 544399 544667 . + . insertions 3 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 544668 544669 . + . intron_id 1 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 544668 568736 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 568735 568736 . + . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 568737 568764 . + . utg18_pilon exonerate:protein2genome:local exon 568737 568764 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 544399 568764 194 + . alignment_id 0 ; Query GL50803_2075-t26_1-p1 ; Align 544399 1 240 ; Align 544642 81 24 ; Align 568738 90 27 utg11_pilon exonerate:protein2genome:local gene 1272516 1272963 623 + . gene_id 0 ; sequence GL50803_20750-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1272516 1272963 . + . utg11_pilon exonerate:protein2genome:local exon 1272516 1272963 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 1272516 1272963 623 + . alignment_id 0 ; Query GL50803_20750-t26_1-p1 ; Align 1272516 45 54 ; Align 1272571 63 393 utg11_pilon exonerate:protein2genome:local gene 1674445 1674786 428 - . gene_id 0 ; sequence GL50803_20753-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1674445 1674786 . - . utg11_pilon exonerate:protein2genome:local exon 1674445 1674786 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1674445 1674786 428 - . alignment_id 0 ; Query GL50803_20753-t26_1-p1 ; Align 1674787 1 342 utg11_pilon exonerate:protein2genome:local gene 1716252 1716434 182 + . gene_id 0 ; sequence GL50803_20764-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1716252 1716434 . + . utg11_pilon exonerate:protein2genome:local exon 1716252 1716434 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1716252 1716434 182 + . alignment_id 0 ; Query GL50803_20764-t26_1-p1 ; Align 1716252 1 183 utg212_pilon exonerate:protein2genome:local gene 10238 10615 379 - . gene_id 0 ; sequence GL50803_20769-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 10238 10615 . - . utg212_pilon exonerate:protein2genome:local exon 10238 10615 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 10238 10615 379 - . alignment_id 0 ; Query GL50803_20769-t26_1-p1 ; Align 10616 1 378 utg11_pilon exonerate:protein2genome:local gene 1777953 1778339 347 - . gene_id 0 ; sequence GL50803_20771-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1777953 1778339 . - . utg11_pilon exonerate:protein2genome:local exon 1777953 1778339 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1777953 1778339 347 - . alignment_id 0 ; Query GL50803_20771-t26_1-p1 ; Align 1778340 1 72 ; Align 1778268 26 315 utg11_pilon exonerate:protein2genome:local gene 1787174 1787479 202 + . gene_id 0 ; sequence GL50803_20773-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1787174 1787479 . + . utg11_pilon exonerate:protein2genome:local exon 1787174 1787479 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1787174 1787479 202 + . alignment_id 0 ; Query GL50803_20773-t26_1-p1 ; Align 1787174 3 33 ; Align 1787210 14 270 utg11_pilon exonerate:protein2genome:local gene 1788805 1789155 376 - . gene_id 0 ; sequence GL50803_20774-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1788805 1789155 . - . utg11_pilon exonerate:protein2genome:local exon 1788805 1789155 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1788805 1789155 376 - . alignment_id 0 ; Query GL50803_20774-t26_1-p1 ; Align 1789156 2 351 utg64_pilon exonerate:protein2genome:local gene 254566 254874 299 + . gene_id 0 ; sequence GL50803_20781-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 254566 254874 . + . utg64_pilon exonerate:protein2genome:local exon 254566 254874 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 254566 254874 299 + . alignment_id 0 ; Query GL50803_20781-t26_1-p1 ; Align 254566 21 99 ; Align 254665 55 210 utg64_pilon exonerate:protein2genome:local gene 252781 253140 268 - . gene_id 0 ; sequence GL50803_20782-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 252781 253140 . - . utg64_pilon exonerate:protein2genome:local exon 252781 253140 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 252781 253140 268 - . alignment_id 0 ; Query GL50803_20782-t26_1-p1 ; Align 253141 11 360 utg64_pilon exonerate:protein2genome:local gene 219560 239932 289 + . gene_id 0 ; sequence GL50803_20789-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 219560 219791 . + . utg64_pilon exonerate:protein2genome:local exon 219560 219791 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 219792 219793 . + . intron_id 1 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 219792 239888 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 239887 239888 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 239889 239932 . + . utg64_pilon exonerate:protein2genome:local exon 239889 239932 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 219560 239932 289 + . alignment_id 0 ; Query GL50803_20789-t26_1-p1 ; Align 219560 1 231 ; Align 239891 79 42 utg64_pilon exonerate:protein2genome:local gene 181272 181694 380 - . gene_id 0 ; sequence GL50803_20794-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 181272 181694 . - . utg64_pilon exonerate:protein2genome:local exon 181272 181694 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 181272 181694 380 - . alignment_id 0 ; Query GL50803_20794-t26_1-p1 ; Align 181695 1 423 utg64_pilon exonerate:protein2genome:local gene 95152 95727 834 - . gene_id 0 ; sequence GL50803_20802-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 95152 95727 . - . utg64_pilon exonerate:protein2genome:local exon 95152 95727 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 95152 95727 834 - . alignment_id 0 ; Query GL50803_20802-t26_1-p1 ; Align 95728 1 534 ; Align 95194 180 42 utg64_pilon exonerate:protein2genome:local gene 128519 128827 207 + . gene_id 0 ; sequence GL50803_20810-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 128519 128827 . + . utg64_pilon exonerate:protein2genome:local exon 128519 128827 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 128519 128827 207 + . alignment_id 0 ; Query GL50803_20810-t26_1-p1 ; Align 128519 1 309 utg64_pilon exonerate:protein2genome:local gene 45506 45859 559 + . gene_id 0 ; sequence GL50803_20815-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 45506 45859 . + . utg64_pilon exonerate:protein2genome:local exon 45506 45859 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 45506 45859 559 + . alignment_id 0 ; Query GL50803_20815-t26_1-p1 ; Align 45506 3 354 utg64_pilon exonerate:protein2genome:local gene 41821 42091 381 + . gene_id 0 ; sequence GL50803_20816-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 41821 42091 . + . utg64_pilon exonerate:protein2genome:local exon 41821 42091 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 41821 42091 381 + . alignment_id 0 ; Query GL50803_20816-t26_1-p1 ; Align 41821 1 219 ; Align 42041 74 51 utg47_pilon exonerate:protein2genome:local gene 136769 137623 1256 - . gene_id 0 ; sequence GL50803_2082-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 136769 137623 . - . utg47_pilon exonerate:protein2genome:local exon 136769 137623 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 136769 137623 1256 - . alignment_id 0 ; Query GL50803_2082-t26_1-p1 ; Align 137624 1 855 utg265_pilon exonerate:protein2genome:local gene 735407 736249 1284 - . gene_id 0 ; sequence GL50803_20836-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 735407 736249 . - . utg265_pilon exonerate:protein2genome:local exon 735407 736249 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 735407 736249 1284 - . alignment_id 0 ; Query GL50803_20836-t26_1-p1 ; Align 736250 1 843 utg64_pilon exonerate:protein2genome:local gene 202879 203043 125 + . gene_id 0 ; sequence GL50803_20841-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 202879 203043 . + . utg64_pilon exonerate:protein2genome:local exon 202879 203043 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 202879 203043 125 + . alignment_id 0 ; Query GL50803_20841-t26_1-p1 ; Align 202879 53 51 ; Align 202930 71 114 utg265_pilon exonerate:protein2genome:local gene 702027 702191 125 - . gene_id 0 ; sequence GL50803_20841-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 702027 702191 . - . utg265_pilon exonerate:protein2genome:local exon 702027 702191 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 702027 702191 125 - . alignment_id 0 ; Query GL50803_20841-t26_1-p1 ; Align 702192 53 51 ; Align 702141 71 114 utg265_pilon exonerate:protein2genome:local gene 1050295 1050618 518 - . gene_id 0 ; sequence GL50803_20849-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1050295 1050618 . - . utg265_pilon exonerate:protein2genome:local exon 1050295 1050618 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1050295 1050618 518 - . alignment_id 0 ; Query GL50803_20849-t26_1-p1 ; Align 1050619 17 324 utg265_pilon exonerate:protein2genome:local gene 952658 953048 424 - . gene_id 0 ; sequence GL50803_20864-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 952658 953048 . - . utg265_pilon exonerate:protein2genome:local exon 952658 953048 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 952658 953048 424 - . alignment_id 0 ; Query GL50803_20864-t26_1-p1 ; Align 953049 3 90 ; Align 952958 33 300 utg308_pilon exonerate:protein2genome:local gene 435262 435591 279 + . gene_id 0 ; sequence GL50803_20868-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 435262 435591 . + . utg308_pilon exonerate:protein2genome:local exon 435262 435591 . + . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 435262 435591 279 + . alignment_id 0 ; Query GL50803_20868-t26_1-p1 ; Align 435262 3 297 ; Align 435559 104 33 utg308_pilon exonerate:protein2genome:local gene 513728 514036 246 + . gene_id 0 ; sequence GL50803_20875-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 513728 514036 . + . utg308_pilon exonerate:protein2genome:local exon 513728 514036 . + . insertions 6 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 513728 514036 246 + . alignment_id 0 ; Query GL50803_20875-t26_1-p1 ; Align 513728 10 165 ; Align 513899 65 57 ; Align 513956 85 81 utg308_pilon exonerate:protein2genome:local gene 961297 961764 641 - . gene_id 0 ; sequence GL50803_20887-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 961297 961764 . - . utg308_pilon exonerate:protein2genome:local exon 961297 961764 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 961297 961764 641 - . alignment_id 0 ; Query GL50803_20887-t26_1-p1 ; Align 961765 2 468 utg308_pilon exonerate:protein2genome:local gene 947329 947658 309 + . gene_id 0 ; sequence GL50803_20889-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 947329 947658 . + . utg308_pilon exonerate:protein2genome:local exon 947329 947658 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 947329 947658 309 + . alignment_id 0 ; Query GL50803_20889-t26_1-p1 ; Align 947329 1 330 utg11_pilon exonerate:protein2genome:local gene 1432221 1432592 274 - . gene_id 0 ; sequence GL50803_20900-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1432221 1432592 . - . utg11_pilon exonerate:protein2genome:local exon 1432221 1432592 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1432221 1432592 274 - . alignment_id 0 ; Query GL50803_20900-t26_1-p1 ; Align 1432593 2 372 utg308_pilon exonerate:protein2genome:local gene 81226 81486 241 + . gene_id 0 ; sequence GL50803_20902-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 81226 81486 . + . utg308_pilon exonerate:protein2genome:local exon 81226 81486 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 81226 81486 241 + . alignment_id 0 ; Query GL50803_20902-t26_1-p1 ; Align 81226 1 261 utg308_pilon exonerate:protein2genome:local gene 90618 90878 241 - . gene_id 0 ; sequence GL50803_20902-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 90618 90878 . - . utg308_pilon exonerate:protein2genome:local exon 90618 90878 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 90618 90878 241 - . alignment_id 0 ; Query GL50803_20902-t26_1-p1 ; Align 90879 1 261 utg11_pilon exonerate:protein2genome:local gene 1055453 1055701 168 + . gene_id 0 ; sequence GL50803_20907-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1055453 1055701 . + . utg11_pilon exonerate:protein2genome:local exon 1055453 1055701 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1055453 1055701 168 + . alignment_id 0 ; Query GL50803_20907-t26_1-p1 ; Align 1055453 1 189 ; Align 1055642 65 60 utg11_pilon exonerate:protein2genome:local gene 1042748 1043014 194 - . gene_id 0 ; sequence GL50803_20908-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1042748 1043014 . - . utg11_pilon exonerate:protein2genome:local exon 1042748 1043014 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1042748 1043014 194 - . alignment_id 0 ; Query GL50803_20908-t26_1-p1 ; Align 1043015 22 267 utg64_pilon exonerate:protein2genome:local gene 841680 847654 269 + . gene_id 0 ; sequence GL50803_20912-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 841680 841787 . + . utg64_pilon exonerate:protein2genome:local exon 841680 841787 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 841788 841789 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 841788 847465 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 847464 847465 . + . intron_id 0 ; splice_site "AC" utg64_pilon exonerate:protein2genome:local cds 847466 847654 . + . utg64_pilon exonerate:protein2genome:local exon 847466 847654 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 841680 847654 269 + . alignment_id 0 ; Query GL50803_20912-t26_1-p1 ; Align 841680 25 27 ; Align 841710 34 78 ; Align 847466 60 189 utg11_pilon exonerate:protein2genome:local gene 1011530 1011868 331 + . gene_id 0 ; sequence GL50803_20916-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1011530 1011868 . + . utg11_pilon exonerate:protein2genome:local exon 1011530 1011868 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1011530 1011868 331 + . alignment_id 0 ; Query GL50803_20916-t26_1-p1 ; Align 1011530 1 339 utg11_pilon exonerate:protein2genome:local gene 928724 929027 201 - . gene_id 0 ; sequence GL50803_20925-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 928724 929027 . - . utg11_pilon exonerate:protein2genome:local exon 928724 929027 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 928724 929027 201 - . alignment_id 0 ; Query GL50803_20925-t26_1-p1 ; Align 929028 1 228 ; Align 928799 78 75 utg731_pilon exonerate:protein2genome:local gene 1051582 1051918 212 - . gene_id 0 ; sequence GL50803_20943-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1051582 1051918 . - . utg731_pilon exonerate:protein2genome:local exon 1051582 1051918 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 1051582 1051918 212 - . alignment_id 0 ; Query GL50803_20943-t26_1-p1 ; Align 1051919 1 174 ; Align 1051744 59 162 utg47_pilon exonerate:protein2genome:local gene 83578 84076 239 - . gene_id 0 ; sequence GL50803_20946-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 83917 84076 . - . utg47_pilon exonerate:protein2genome:local exon 83917 84076 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local splice5 83915 83916 . - . intron_id 1 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 83857 83916 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 83857 83858 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 83578 83856 . - . utg47_pilon exonerate:protein2genome:local exon 83578 83856 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 83578 84076 239 - . alignment_id 0 ; Query GL50803_20946-t26_1-p1 ; Align 84077 27 87 ; Align 83989 57 72 ; Align 83857 81 279 utg731_pilon exonerate:protein2genome:local gene 1190091 1190444 322 - . gene_id 0 ; sequence GL50803_20970-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1190091 1190444 . - . utg731_pilon exonerate:protein2genome:local exon 1190091 1190444 . - . insertions 3 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1190091 1190444 322 - . alignment_id 0 ; Query GL50803_20970-t26_1-p1 ; Align 1190445 1 114 ; Align 1190331 40 63 ; Align 1190265 61 174 utg731_pilon exonerate:protein2genome:local gene 1198528 1198796 243 + . gene_id 0 ; sequence GL50803_20972-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1198528 1198796 . + . utg731_pilon exonerate:protein2genome:local exon 1198528 1198796 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 1198528 1198796 243 + . alignment_id 0 ; Query GL50803_20972-t26_1-p1 ; Align 1198528 1 135 ; Align 1198665 46 6 ; Align 1198671 49 126 utg349_pilon exonerate:protein2genome:local gene 847097 848386 2148 + . gene_id 0 ; sequence GL50803_2098-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 847097 848386 . + . utg349_pilon exonerate:protein2genome:local exon 847097 848386 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 847097 848386 2148 + . alignment_id 0 ; Query GL50803_2098-t26_1-p1 ; Align 847097 1 1290 utg731_pilon exonerate:protein2genome:local gene 1363099 1363374 284 + . gene_id 0 ; sequence GL50803_20983-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1363099 1363374 . + . utg731_pilon exonerate:protein2genome:local exon 1363099 1363374 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1363099 1363374 284 + . alignment_id 0 ; Query GL50803_20983-t26_1-p1 ; Align 1363099 3 276 utg64_pilon exonerate:protein2genome:local gene 455557 455958 634 - . gene_id 0 ; sequence GL50803_2101-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 455557 455958 . - . utg64_pilon exonerate:protein2genome:local exon 455557 455958 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 455557 455958 634 - . alignment_id 0 ; Query GL50803_2101-t26_1-p1 ; Align 455959 1 402 utg212_pilon exonerate:protein2genome:local gene 273970 283008 13420 - . gene_id 0 ; sequence GL50803_21048-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 273970 283008 . - . utg212_pilon exonerate:protein2genome:local exon 273970 283008 . - . insertions 3 ; deletions 6 ; frameshifts 9 utg212_pilon exonerate:protein2genome:local similarity 273970 283008 13420 - . alignment_id 0 ; Query GL50803_21048-t26_1-p1 ; Align 283009 1020 2067 ; Align 280942 1712 1365 ; Align 279575 2168 264 ; Align 279310 2256 594 ; Align 278715 2454 561 ; Align 278151 2641 855 ; Align 277294 2927 1527 ; Align 275765 3437 1380 ; Align 274384 3897 414 utg212_pilon exonerate:protein2genome:local gene 311480 311818 380 - . gene_id 0 ; sequence GL50803_21052-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 311480 311818 . - . utg212_pilon exonerate:protein2genome:local exon 311480 311818 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 311480 311818 380 - . alignment_id 0 ; Query GL50803_21052-t26_1-p1 ; Align 311819 3 339 utg212_pilon exonerate:protein2genome:local gene 312649 314709 3202 + . gene_id 0 ; sequence GL50803_21053-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 312649 314709 . + . utg212_pilon exonerate:protein2genome:local exon 312649 314709 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 312649 314709 3202 + . alignment_id 0 ; Query GL50803_21053-t26_1-p1 ; Align 312649 1 2061 utg212_pilon exonerate:protein2genome:local gene 336471 338483 2753 + . gene_id 0 ; sequence GL50803_21063-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 336471 338483 . + . utg212_pilon exonerate:protein2genome:local exon 336471 338483 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 336471 338483 2753 + . alignment_id 0 ; Query GL50803_21063-t26_1-p1 ; Align 336471 9 2013 utg64_pilon exonerate:protein2genome:local gene 590443 591426 1635 + . gene_id 0 ; sequence GL50803_2107-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 590443 591426 . + . utg64_pilon exonerate:protein2genome:local exon 590443 591426 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 590443 591426 1635 + . alignment_id 0 ; Query GL50803_2107-t26_1-p1 ; Align 590443 1 984 utg212_pilon exonerate:protein2genome:local gene 584490 590384 6861 - . gene_id 0 ; sequence GL50803_21082-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 584490 590384 . - . utg212_pilon exonerate:protein2genome:local exon 584490 590384 . - . insertions 33 ; deletions 7 ; frameshifts 3 utg212_pilon exonerate:protein2genome:local similarity 584490 590384 6861 - . alignment_id 0 ; Query GL50803_21082-t26_1-p1 ; Align 590385 1 255 ; Align 590130 88 462 ; Align 589668 243 243 ; Align 589424 325 927 ; Align 588497 635 3 ; Align 588492 636 684 ; Align 587808 865 1857 ; Align 585942 1484 54 ; Align 585879 1502 114 ; Align 585762 1540 54 ; Align 585699 1558 21 ; Align 585675 1565 81 ; Align 585594 1593 1104 utg11_pilon exonerate:protein2genome:local gene 1532175 1532306 205 + . gene_id 0 ; sequence GL50803_21088-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1532175 1532306 . + . utg11_pilon exonerate:protein2genome:local exon 1532175 1532306 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1532175 1532306 205 + . alignment_id 0 ; Query GL50803_21088-t26_1-p1 ; Align 1532175 1 132 utg349_pilon exonerate:protein2genome:local gene 942977 943438 372 - . gene_id 0 ; sequence GL50803_21102-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 942977 943438 . - . utg349_pilon exonerate:protein2genome:local exon 942977 943438 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 942977 943438 372 - . alignment_id 0 ; Query GL50803_21102-t26_1-p1 ; Align 943439 6 462 utg212_pilon exonerate:protein2genome:local gene 201064 201762 1189 - . gene_id 0 ; sequence GL50803_21110-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 201064 201762 . - . utg212_pilon exonerate:protein2genome:local exon 201064 201762 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 201064 201762 1189 - . alignment_id 0 ; Query GL50803_21110-t26_1-p1 ; Align 201763 1 699 utg212_pilon exonerate:protein2genome:local gene 187737 189545 2915 + . gene_id 0 ; sequence GL50803_21116-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 187737 189545 . + . utg212_pilon exonerate:protein2genome:local exon 187737 189545 . + . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local similarity 187737 189545 2915 + . alignment_id 0 ; Query GL50803_21116-t26_1-p1 ; Align 187737 1 1089 ; Align 188826 365 720 utg212_pilon exonerate:protein2genome:local gene 174202 176457 3547 - . gene_id 0 ; sequence GL50803_21118-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 174202 176457 . - . utg212_pilon exonerate:protein2genome:local exon 174202 176457 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 174202 176457 3547 - . alignment_id 0 ; Query GL50803_21118-t26_1-p1 ; Align 176458 14 2256 utg47_pilon exonerate:protein2genome:local gene 1333117 1334133 1051 - . gene_id 0 ; sequence GL50803_21133-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1333117 1334133 . - . utg47_pilon exonerate:protein2genome:local exon 1333117 1334133 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1333117 1334133 1051 - . alignment_id 0 ; Query GL50803_21133-t26_1-p1 ; Align 1334134 1 783 ; Align 1333348 262 231 utg47_pilon exonerate:protein2genome:local gene 1477040 1480006 4356 - . gene_id 0 ; sequence GL50803_21156-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1477040 1480006 . - . utg47_pilon exonerate:protein2genome:local exon 1477040 1480006 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1477040 1480006 4356 - . alignment_id 0 ; Query GL50803_21156-t26_1-p1 ; Align 1480007 1 1773 ; Align 1478234 593 1194 utg47_pilon exonerate:protein2genome:local gene 290601 291473 1150 + . gene_id 0 ; sequence GL50803_2116-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 290601 291473 . + . utg47_pilon exonerate:protein2genome:local exon 290601 291473 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 290601 291473 1150 + . alignment_id 0 ; Query GL50803_2116-t26_1-p1 ; Align 290601 1 465 ; Align 291066 157 408 utg47_pilon exonerate:protein2genome:local gene 1445640 1445916 227 + . gene_id 0 ; sequence GL50803_21160-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1445640 1445916 . + . utg47_pilon exonerate:protein2genome:local exon 1445640 1445916 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1445640 1445916 227 + . alignment_id 0 ; Query GL50803_21160-t26_1-p1 ; Align 1445640 1 150 ; Align 1445790 52 6 ; Align 1445797 54 120 utg11_pilon exonerate:protein2genome:local gene 588806 588943 200 - . gene_id 0 ; sequence GL50803_21179-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 588806 588943 . - . utg11_pilon exonerate:protein2genome:local exon 588806 588943 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 588806 588943 200 - . alignment_id 0 ; Query GL50803_21179-t26_1-p1 ; Align 588944 1 138 utg47_pilon exonerate:protein2genome:local gene 292567 292941 379 - . gene_id 0 ; sequence GL50803_2118-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 292567 292941 . - . utg47_pilon exonerate:protein2genome:local exon 292567 292941 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 292567 292941 379 - . alignment_id 0 ; Query GL50803_2118-t26_1-p1 ; Align 292942 1 276 ; Align 292663 93 96 utg7494_pilon exonerate:protein2genome:local gene 21911 61703 259 + . gene_id 0 ; sequence GL50803_21184-t26_1-p1 ; gene_orientation + utg7494_pilon exonerate:protein2genome:local cds 21911 22035 . + . utg7494_pilon exonerate:protein2genome:local exon 21911 22035 . + . insertions 0 ; deletions 0 utg7494_pilon exonerate:protein2genome:local splice5 22036 22037 . + . intron_id 1 ; splice_site "GG" utg7494_pilon exonerate:protein2genome:local intron 22036 28399 . + . intron_id 1 utg7494_pilon exonerate:protein2genome:local splice3 28398 28399 . + . intron_id 0 ; splice_site "AG" utg7494_pilon exonerate:protein2genome:local cds 28400 28502 . + . utg7494_pilon exonerate:protein2genome:local exon 28400 28502 . + . insertions 0 ; deletions 0 utg7494_pilon exonerate:protein2genome:local splice5 28503 28504 . + . intron_id 2 ; splice_site "GG" utg7494_pilon exonerate:protein2genome:local intron 28503 61433 . + . intron_id 2 utg7494_pilon exonerate:protein2genome:local splice3 61432 61433 . + . intron_id 1 ; splice_site "AG" utg7494_pilon exonerate:protein2genome:local cds 61434 61703 . + . utg7494_pilon exonerate:protein2genome:local exon 61434 61703 . + . insertions 0 ; deletions 0 utg7494_pilon exonerate:protein2genome:local similarity 21911 61703 259 + . alignment_id 0 ; Query GL50803_21184-t26_1-p1 ; Align 21911 1 123 ; Align 28401 43 102 ; Align 61434 77 270 utg47_pilon exonerate:protein2genome:local gene 404633 408115 4684 + . gene_id 0 ; sequence GL50803_21198-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 404633 408115 . + . utg47_pilon exonerate:protein2genome:local exon 404633 408115 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 404633 408115 4684 + . alignment_id 0 ; Query GL50803_21198-t26_1-p1 ; Align 404633 1 3483 utg47_pilon exonerate:protein2genome:local gene 421458 422276 900 + . gene_id 0 ; sequence GL50803_21201-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 421458 422276 . + . utg47_pilon exonerate:protein2genome:local exon 421458 422276 . + . insertions 12 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 421458 422276 900 + . alignment_id 0 ; Query GL50803_21201-t26_1-p1 ; Align 421458 1 564 ; Align 422022 190 51 ; Align 422085 207 192 utg47_pilon exonerate:protein2genome:local gene 583073 585814 2477 + . gene_id 0 ; sequence GL50803_21232-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 583073 583816 . + . utg47_pilon exonerate:protein2genome:local exon 583073 583816 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 583817 583818 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 583817 583849 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 583848 583849 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 583850 585814 . + . utg47_pilon exonerate:protein2genome:local exon 583850 585814 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 583073 585814 2477 + . alignment_id 0 ; Query GL50803_21232-t26_1-p1 ; Align 583073 1 621 ; Align 583694 209 123 ; Align 583850 250 147 ; Align 583997 301 1818 utg47_pilon exonerate:protein2genome:local gene 531617 532546 1068 - . gene_id 0 ; sequence GL50803_21233-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 531617 532546 . - . utg47_pilon exonerate:protein2genome:local exon 531617 532546 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 531617 532546 1068 - . alignment_id 0 ; Query GL50803_21233-t26_1-p1 ; Align 532547 1 846 ; Align 531698 283 81 utg47_pilon exonerate:protein2genome:local gene 532623 534099 1999 + . gene_id 0 ; sequence GL50803_21234-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 532623 534099 . + . utg47_pilon exonerate:protein2genome:local exon 532623 534099 . + . insertions 0 ; deletions 3 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 532623 534099 1999 + . alignment_id 0 ; Query GL50803_21234-t26_1-p1 ; Align 532623 1 1035 ; Align 533660 347 51 ; Align 533711 365 303 ; Align 534016 467 84 utg731_pilon exonerate:protein2genome:local gene 46992 47105 143 - . gene_id 0 ; sequence GL50803_21284-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 46992 47105 . - . utg731_pilon exonerate:protein2genome:local exon 46992 47105 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 46992 47105 143 - . alignment_id 0 ; Query GL50803_21284-t26_1-p1 ; Align 47106 1 114 utg308_pilon exonerate:protein2genome:local gene 524490 524900 385 + . gene_id 0 ; sequence GL50803_21305-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 524490 524900 . + . utg308_pilon exonerate:protein2genome:local exon 524490 524900 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 524490 524900 385 + . alignment_id 0 ; Query GL50803_21305-t26_1-p1 ; Align 524490 4 411 utg308_pilon exonerate:protein2genome:local gene 583805 586443 3820 - . gene_id 0 ; sequence GL50803_21318-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 583805 586443 . - . utg308_pilon exonerate:protein2genome:local exon 583805 586443 . - . insertions 0 ; deletions 4 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 583805 586443 3820 - . alignment_id 0 ; Query GL50803_21318-t26_1-p1 ; Align 586444 1 963 ; Align 585481 325 1305 ; Align 584174 761 369 utg308_pilon exonerate:protein2genome:local gene 588352 590373 2733 - . gene_id 0 ; sequence GL50803_21321-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 588352 590373 . - . utg308_pilon exonerate:protein2genome:local exon 588352 590373 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 588352 590373 2733 - . alignment_id 0 ; Query GL50803_21321-t26_1-p1 ; Align 590374 1 567 ; Align 589807 191 1455 utg11_pilon exonerate:protein2genome:local gene 1435837 1442433 8341 - . gene_id 0 ; sequence GL50803_21327-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1440595 1442433 . - . utg11_pilon exonerate:protein2genome:local exon 1440595 1442433 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1440593 1440594 . - . intron_id 1 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 1440559 1440594 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1440559 1440560 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1435837 1440558 . - . utg11_pilon exonerate:protein2genome:local exon 1435837 1440558 . - . insertions 30 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1435837 1442433 8341 - . alignment_id 0 ; Query GL50803_21327-t26_1-p1 ; Align 1442434 1 1839 ; Align 1440559 614 375 ; Align 1440184 740 1701 ; Align 1438474 1307 39 ; Align 1438432 1320 168 ; Align 1438264 1377 1152 ; Align 1437097 1761 1047 ; Align 1436047 2110 210 utg11_pilon exonerate:protein2genome:local gene 1459424 1462048 3105 + . gene_id 0 ; sequence GL50803_21330-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1459424 1462048 . + . utg11_pilon exonerate:protein2genome:local exon 1459424 1462048 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1459424 1462048 3105 + . alignment_id 0 ; Query GL50803_21330-t26_1-p1 ; Align 1459424 1 714 ; Align 1460138 240 1911 utg11_pilon exonerate:protein2genome:local gene 1462088 1463290 1958 - . gene_id 0 ; sequence GL50803_21331-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1462088 1463290 . - . utg11_pilon exonerate:protein2genome:local exon 1462088 1463290 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1462088 1463290 1958 - . alignment_id 0 ; Query GL50803_21331-t26_1-p1 ; Align 1463291 1 1203 utg11_pilon exonerate:protein2genome:local gene 1495345 1495443 100 + . gene_id 0 ; sequence GL50803_21336-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1495345 1495443 . + . utg11_pilon exonerate:protein2genome:local exon 1495345 1495443 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1495345 1495443 100 + . alignment_id 0 ; Query GL50803_21336-t26_1-p1 ; Align 1495345 1 99 utg349_pilon exonerate:protein2genome:local gene 705296 706828 1968 + . gene_id 0 ; sequence GL50803_21341-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 705296 706828 . + . utg349_pilon exonerate:protein2genome:local exon 705296 706828 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 705296 706828 1968 + . alignment_id 0 ; Query GL50803_21341-t26_1-p1 ; Align 705296 2 1533 utg349_pilon exonerate:protein2genome:local gene 706917 707726 1025 + . gene_id 0 ; sequence GL50803_21342-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 706917 707726 . + . utg349_pilon exonerate:protein2genome:local exon 706917 707726 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 706917 707726 1025 + . alignment_id 0 ; Query GL50803_21342-t26_1-p1 ; Align 706917 1 810 utg349_pilon exonerate:protein2genome:local gene 772055 774367 2876 + . gene_id 0 ; sequence GL50803_21365-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 772055 774367 . + . utg349_pilon exonerate:protein2genome:local exon 772055 774367 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 772055 774367 2876 + . alignment_id 0 ; Query GL50803_21365-t26_1-p1 ; Align 772055 261 2094 ; Align 774152 959 216 utg349_pilon exonerate:protein2genome:local gene 774447 776465 2861 - . gene_id 0 ; sequence GL50803_21366-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 774973 776465 . - . utg349_pilon exonerate:protein2genome:local exon 774973 776465 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 774971 774972 . - . intron_id 1 ; splice_site "CC" utg349_pilon exonerate:protein2genome:local intron 774910 774972 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 774910 774911 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 774447 774909 . - . utg349_pilon exonerate:protein2genome:local exon 774447 774909 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 774447 776465 2861 - . alignment_id 0 ; Query GL50803_21366-t26_1-p1 ; Align 776466 1 1443 ; Align 775023 483 48 ; Align 774909 500 462 utg349_pilon exonerate:protein2genome:local gene 776425 777606 1107 + . gene_id 0 ; sequence GL50803_21367-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 776425 777606 . + . utg349_pilon exonerate:protein2genome:local exon 776425 777606 . + . insertions 0 ; deletions 10 utg349_pilon exonerate:protein2genome:local similarity 776425 777606 1107 + . alignment_id 0 ; Query GL50803_21367-t26_1-p1 ; Align 776425 1 552 ; Align 776977 189 201 ; Align 777178 259 192 ; Align 777370 326 237 utg349_pilon exonerate:protein2genome:local gene 821316 821492 184 - . gene_id 0 ; sequence GL50803_21386-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 821316 821492 . - . utg349_pilon exonerate:protein2genome:local exon 821316 821492 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 821316 821492 184 - . alignment_id 0 ; Query GL50803_21386-t26_1-p1 ; Align 821493 1 177 utg47_pilon exonerate:protein2genome:local gene 288908 290074 1542 + . gene_id 0 ; sequence GL50803_21398-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 288908 290074 . + . utg47_pilon exonerate:protein2genome:local exon 288908 290074 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 288908 290074 1542 + . alignment_id 0 ; Query GL50803_21398-t26_1-p1 ; Align 288908 1 1167 utg47_pilon exonerate:protein2genome:local gene 190195 196124 8947 + . gene_id 0 ; sequence GL50803_21411-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 190195 196124 . + . utg47_pilon exonerate:protein2genome:local exon 190195 196124 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 190195 196124 8947 + . alignment_id 0 ; Query GL50803_21411-t26_1-p1 ; Align 190195 1 5454 ; Align 195651 1820 228 ; Align 195879 1897 246 utg47_pilon exonerate:protein2genome:local gene 239743 243168 5371 + . gene_id 0 ; sequence GL50803_21423-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 239743 243168 . + . utg47_pilon exonerate:protein2genome:local exon 239743 243168 . + . insertions 30 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 239743 243168 5371 + . alignment_id 0 ; Query GL50803_21423-t26_1-p1 ; Align 239743 1 2247 ; Align 241999 750 117 ; Align 242125 789 114 ; Align 242251 827 918 utg47_pilon exonerate:protein2genome:local gene 263164 263295 118 - . gene_id 0 ; sequence GL50803_21432-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 263164 263295 . - . utg47_pilon exonerate:protein2genome:local exon 263164 263295 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 263164 263295 118 - . alignment_id 0 ; Query GL50803_21432-t26_1-p1 ; Align 263296 1 132 utg47_pilon exonerate:protein2genome:local gene 285246 287016 1816 + . gene_id 0 ; sequence GL50803_21435-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 285246 287016 . + . utg47_pilon exonerate:protein2genome:local exon 285246 287016 . + . insertions 0 ; deletions 7 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 285246 287016 1816 + . alignment_id 0 ; Query GL50803_21435-t26_1-p1 ; Align 285246 1 117 ; Align 285363 41 69 ; Align 285433 64 699 ; Align 286132 300 336 ; Align 286468 415 549 utg47_pilon exonerate:protein2genome:local gene 287343 287636 390 - . gene_id 0 ; sequence GL50803_21438-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 287343 287636 . - . utg47_pilon exonerate:protein2genome:local exon 287343 287636 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 287343 287636 390 - . alignment_id 0 ; Query GL50803_21438-t26_1-p1 ; Align 287637 1 222 ; Align 287415 76 72 utg212_pilon exonerate:protein2genome:local gene 492343 494115 2557 + . gene_id 0 ; sequence GL50803_21444-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 492343 494115 . + . utg212_pilon exonerate:protein2genome:local exon 492343 494115 . + . insertions 15 ; deletions 2 utg212_pilon exonerate:protein2genome:local similarity 492343 494115 2557 + . alignment_id 0 ; Query GL50803_21444-t26_1-p1 ; Align 492343 1 411 ; Align 492769 138 126 ; Align 492895 182 1221 utg265_pilon exonerate:protein2genome:local gene 138470 138661 145 - . gene_id 0 ; sequence GL50803_21456-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 138470 138661 . - . utg265_pilon exonerate:protein2genome:local exon 138470 138661 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 138470 138661 145 - . alignment_id 0 ; Query GL50803_21456-t26_1-p1 ; Align 138662 1 192 utg265_pilon exonerate:protein2genome:local gene 125925 126080 156 - . gene_id 0 ; sequence GL50803_21461-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 125925 126080 . - . utg265_pilon exonerate:protein2genome:local exon 125925 126080 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 125925 126080 156 - . alignment_id 0 ; Query GL50803_21461-t26_1-p1 ; Align 126081 1 156 utg265_pilon exonerate:protein2genome:local gene 523729 526511 3672 - . gene_id 0 ; sequence GL50803_21474-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 523729 526511 . - . utg265_pilon exonerate:protein2genome:local exon 523729 526511 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 523729 526511 3672 - . alignment_id 0 ; Query GL50803_21474-t26_1-p1 ; Align 526512 1 2211 ; Align 524299 739 570 utg265_pilon exonerate:protein2genome:local gene 488670 490043 1508 - . gene_id 0 ; sequence GL50803_21485-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 488670 490043 . - . utg265_pilon exonerate:protein2genome:local exon 488670 490043 . - . insertions 9 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 488670 490043 1508 - . alignment_id 0 ; Query GL50803_21485-t26_1-p1 ; Align 490044 18 453 ; Align 489588 169 33 ; Align 489549 180 879 utg265_pilon exonerate:protein2genome:local gene 749855 751012 1712 - . gene_id 0 ; sequence GL50803_21498-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 749855 751012 . - . utg265_pilon exonerate:protein2genome:local exon 749855 751012 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 749855 751012 1712 - . alignment_id 0 ; Query GL50803_21498-t26_1-p1 ; Align 751013 1 1158 utg265_pilon exonerate:protein2genome:local gene 733479 734198 1195 - . gene_id 0 ; sequence GL50803_21502-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 733479 734198 . - . utg265_pilon exonerate:protein2genome:local exon 733479 734198 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 733479 734198 1195 - . alignment_id 0 ; Query GL50803_21502-t26_1-p1 ; Align 734199 1 720 utg47_pilon exonerate:protein2genome:local gene 179781 1046288 1930 - . gene_id 0 ; sequence GL50803_21505-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1045976 1046288 . - . utg47_pilon exonerate:protein2genome:local exon 1045976 1046288 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 1045974 1045975 . - . intron_id 1 ; splice_site "TT" utg47_pilon exonerate:protein2genome:local intron 948595 1045975 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 948595 948596 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 948472 948594 . - . utg47_pilon exonerate:protein2genome:local exon 948472 948594 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 948470 948471 . - . intron_id 2 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 768834 948471 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 768834 768835 . - . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 768831 768833 . - . utg47_pilon exonerate:protein2genome:local exon 768831 768833 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 768829 768830 . - . intron_id 3 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 587564 768830 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 587564 587565 . - . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 587424 587563 . - . utg47_pilon exonerate:protein2genome:local exon 587424 587563 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 587422 587423 . - . intron_id 4 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 438914 587423 . - . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 438914 438915 . - . intron_id 3 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local cds 438179 438913 . - . utg47_pilon exonerate:protein2genome:local exon 438179 438913 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 438177 438178 . - . intron_id 5 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 298385 438178 . - . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 298385 298386 . - . intron_id 4 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 298254 298384 . - . utg47_pilon exonerate:protein2genome:local exon 298254 298384 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 298252 298253 . - . intron_id 6 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 182490 298253 . - . intron_id 6 utg47_pilon exonerate:protein2genome:local splice3 182490 182491 . - . intron_id 5 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local cds 182245 182489 . - . utg47_pilon exonerate:protein2genome:local exon 182245 182489 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 182243 182244 . - . intron_id 7 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 181160 182244 . - . intron_id 7 utg47_pilon exonerate:protein2genome:local splice3 181160 181161 . - . intron_id 6 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 180907 181159 . - . utg47_pilon exonerate:protein2genome:local exon 180907 181159 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 180905 180906 . - . intron_id 8 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 180576 180906 . - . intron_id 8 utg47_pilon exonerate:protein2genome:local splice3 180576 180577 . - . intron_id 7 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local cds 180496 180575 . - . utg47_pilon exonerate:protein2genome:local exon 180496 180575 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 180494 180495 . - . intron_id 9 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 180221 180495 . - . intron_id 9 utg47_pilon exonerate:protein2genome:local splice3 180221 180222 . - . intron_id 8 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local cds 179781 180220 . - . utg47_pilon exonerate:protein2genome:local exon 179781 180220 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 179781 1046288 1930 - . alignment_id 0 ; Query GL50803_21505-t26_1-p1 ; Align 1046289 21 72 ; Align 1046217 48 240 ; Align 948593 129 120 ; Align 587562 171 138 ; Align 438914 217 441 ; Align 438470 364 291 ; Align 298385 461 129 ; Align 182489 505 243 ; Align 181158 587 249 ; Align 180575 671 78 ; Align 180219 698 438 utg265_pilon exonerate:protein2genome:local gene 675179 676051 1426 + . gene_id 0 ; sequence GL50803_21512-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 675179 676051 . + . utg265_pilon exonerate:protein2genome:local exon 675179 676051 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 675179 676051 1426 + . alignment_id 0 ; Query GL50803_21512-t26_1-p1 ; Align 675179 1 873 utg11_pilon exonerate:protein2genome:local gene 80819 81166 463 + . gene_id 0 ; sequence GL50803_21525-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 80819 81166 . + . utg11_pilon exonerate:protein2genome:local exon 80819 81166 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 80819 81166 463 + . alignment_id 0 ; Query GL50803_21525-t26_1-p1 ; Align 80819 1 348 utg11_pilon exonerate:protein2genome:local gene 75236 77951 3494 - . gene_id 0 ; sequence GL50803_21527-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 75236 77951 . - . utg11_pilon exonerate:protein2genome:local exon 75236 77951 . - . insertions 0 ; deletions 2 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 75236 77951 3494 - . alignment_id 0 ; Query GL50803_21527-t26_1-p1 ; Align 77952 1 1047 ; Align 76904 350 690 ; Align 76214 581 342 ; Align 75872 696 636 utg11_pilon exonerate:protein2genome:local gene 71413 71808 606 - . gene_id 0 ; sequence GL50803_21531-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 71413 71808 . - . utg11_pilon exonerate:protein2genome:local exon 71413 71808 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 71413 71808 606 - . alignment_id 0 ; Query GL50803_21531-t26_1-p1 ; Align 71809 1 396 utg11_pilon exonerate:protein2genome:local gene 58406 58600 130 - . gene_id 0 ; sequence GL50803_21536-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 58406 58600 . - . utg11_pilon exonerate:protein2genome:local exon 58406 58600 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 58406 58600 130 - . alignment_id 0 ; Query GL50803_21536-t26_1-p1 ; Align 58601 1 195 utg11_pilon exonerate:protein2genome:local gene 517220 517480 358 + . gene_id 0 ; sequence GL50803_2155-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 517220 517480 . + . utg11_pilon exonerate:protein2genome:local exon 517220 517480 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 517220 517480 358 + . alignment_id 0 ; Query GL50803_2155-t26_1-p1 ; Align 517220 13 261 utg11_pilon exonerate:protein2genome:local gene 513084 513257 204 - . gene_id 0 ; sequence GL50803_2158-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 513084 513257 . - . utg11_pilon exonerate:protein2genome:local exon 513084 513257 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 513084 513257 204 - . alignment_id 0 ; Query GL50803_2158-t26_1-p1 ; Align 513258 1 174 utg731_pilon exonerate:protein2genome:local gene 751725 752342 698 + . gene_id 0 ; sequence GL50803_21592-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 751725 752342 . + . utg731_pilon exonerate:protein2genome:local exon 751725 752342 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 751725 752342 698 + . alignment_id 0 ; Query GL50803_21592-t26_1-p1 ; Align 751725 1 507 ; Align 752232 171 111 utg731_pilon exonerate:protein2genome:local gene 703094 704573 2013 + . gene_id 0 ; sequence GL50803_21603-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 703094 704573 . + . utg731_pilon exonerate:protein2genome:local exon 703094 704573 . + . insertions 0 ; deletions 5 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 703094 704573 2013 + . alignment_id 0 ; Query GL50803_21603-t26_1-p1 ; Align 703094 1 57 ; Align 703152 20 774 ; Align 703926 281 369 ; Align 704295 405 69 ; Align 704364 429 210 utg47_pilon exonerate:protein2genome:local gene 735388 735630 202 - . gene_id 0 ; sequence GL50803_21614-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 735388 735630 . - . utg47_pilon exonerate:protein2genome:local exon 735388 735630 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 735388 735630 202 - . alignment_id 0 ; Query GL50803_21614-t26_1-p1 ; Align 735631 5 243 utg47_pilon exonerate:protein2genome:local gene 773612 773797 143 + . gene_id 0 ; sequence GL50803_21620-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 773612 773797 . + . utg47_pilon exonerate:protein2genome:local exon 773612 773797 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 773612 773797 143 + . alignment_id 0 ; Query GL50803_21620-t26_1-p1 ; Align 773612 1 186 utg47_pilon exonerate:protein2genome:local gene 772275 777431 6492 - . gene_id 0 ; sequence GL50803_21622-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 772838 777431 . - . utg47_pilon exonerate:protein2genome:local exon 772838 777431 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 772836 772837 . - . intron_id 1 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local intron 772799 772837 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 772799 772800 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 772275 772798 . - . utg47_pilon exonerate:protein2genome:local exon 772275 772798 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 772275 777431 6492 - . alignment_id 0 ; Query GL50803_21622-t26_1-p1 ; Align 777432 1 1698 ; Align 775731 567 2892 ; Align 772797 1532 522 utg18_pilon exonerate:protein2genome:local gene 196957 198093 1323 + . gene_id 0 ; sequence GL50803_21628-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 196957 198093 . + . utg18_pilon exonerate:protein2genome:local exon 196957 198093 . + . insertions 3 ; deletions 5 utg18_pilon exonerate:protein2genome:local similarity 196957 198093 1323 + . alignment_id 0 ; Query GL50803_21628-t26_1-p1 ; Align 196957 1 738 ; Align 197698 247 48 ; Align 197746 268 348 utg18_pilon exonerate:protein2genome:local gene 314625 320399 7513 - . gene_id 0 ; sequence GL50803_21662-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 314625 320399 . - . utg18_pilon exonerate:protein2genome:local exon 314625 320399 . - . insertions 12 ; deletions 4 utg18_pilon exonerate:protein2genome:local similarity 314625 320399 7513 - . alignment_id 0 ; Query GL50803_21662-t26_1-p1 ; Align 320400 32 3039 ; Align 317358 1045 201 ; Align 317157 1113 1050 ; Align 316101 1463 432 ; Align 315666 1607 387 ; Align 315279 1739 654 utg11_pilon exonerate:protein2genome:local gene 1024144 1072562 984 + . gene_id 0 ; sequence GL50803_2170-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1024144 1024175 . + . utg11_pilon exonerate:protein2genome:local exon 1024144 1024175 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1024176 1024177 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1024176 1071697 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1071696 1071697 . + . intron_id 0 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local cds 1071698 1072562 . + . utg11_pilon exonerate:protein2genome:local exon 1071698 1072562 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1024144 1072562 984 + . alignment_id 0 ; Query GL50803_2170-t26_1-p1 ; Align 1024144 7 30 ; Align 1071699 18 162 ; Align 1071861 73 660 ; Align 1072521 294 42 utg349_pilon exonerate:protein2genome:local gene 430941 431189 374 + . gene_id 0 ; sequence GL50803_2173-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 430941 431189 . + . utg349_pilon exonerate:protein2genome:local exon 430941 431189 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 430941 431189 374 + . alignment_id 0 ; Query GL50803_2173-t26_1-p1 ; Align 430941 1 249 utg64_pilon exonerate:protein2genome:local gene 390943 392052 1779 - . gene_id 0 ; sequence GL50803_21750-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 390943 392052 . - . utg64_pilon exonerate:protein2genome:local exon 390943 392052 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 390943 392052 1779 - . alignment_id 0 ; Query GL50803_21750-t26_1-p1 ; Align 392053 1 1110 utg64_pilon exonerate:protein2genome:local gene 399734 399919 219 + . gene_id 0 ; sequence GL50803_21754-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 399734 399919 . + . utg64_pilon exonerate:protein2genome:local exon 399734 399919 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 399734 399919 219 + . alignment_id 0 ; Query GL50803_21754-t26_1-p1 ; Align 399734 1 186 utg64_pilon exonerate:protein2genome:local gene 507728 507967 244 + . gene_id 0 ; sequence GL50803_21767-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 507728 507967 . + . utg64_pilon exonerate:protein2genome:local exon 507728 507967 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 507728 507967 244 + . alignment_id 0 ; Query GL50803_21767-t26_1-p1 ; Align 507728 1 240 utg64_pilon exonerate:protein2genome:local gene 25585 25692 118 + . gene_id 0 ; sequence GL50803_21782-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 25585 25692 . + . utg64_pilon exonerate:protein2genome:local exon 25585 25692 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 25585 25692 118 + . alignment_id 0 ; Query GL50803_21782-t26_1-p1 ; Align 25585 1 108 utg47_pilon exonerate:protein2genome:local gene 20226 21431 1721 + . gene_id 0 ; sequence GL50803_21792-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 20226 21431 . + . utg47_pilon exonerate:protein2genome:local exon 20226 21431 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 20226 21431 1721 + . alignment_id 0 ; Query GL50803_21792-t26_1-p1 ; Align 20226 1 1206 utg364_pilon exonerate:protein2genome:local gene 55233 58145 4062 + . gene_id 0 ; sequence GL50803_21799-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 55233 58145 . + . utg364_pilon exonerate:protein2genome:local exon 55233 58145 . + . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 55233 58145 4062 + . alignment_id 0 ; Query GL50803_21799-t26_1-p1 ; Align 55233 1 2913 utg364_pilon exonerate:protein2genome:local gene 79033 80669 2543 - . gene_id 0 ; sequence GL50803_21803-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 79033 80669 . - . utg364_pilon exonerate:protein2genome:local exon 79033 80669 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg364_pilon exonerate:protein2genome:local similarity 79033 80669 2543 - . alignment_id 0 ; Query GL50803_21803-t26_1-p1 ; Align 80670 1 651 ; Align 80017 219 984 utg11_pilon exonerate:protein2genome:local gene 1225728 1225883 158 - . gene_id 0 ; sequence GL50803_21866-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1225728 1225883 . - . utg11_pilon exonerate:protein2genome:local exon 1225728 1225883 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1225728 1225883 158 - . alignment_id 0 ; Query GL50803_21866-t26_1-p1 ; Align 1225884 3 156 utg308_pilon exonerate:protein2genome:local gene 469067 475822 7897 - . gene_id 0 ; sequence GL50803_21897-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 469067 475822 . - . utg308_pilon exonerate:protein2genome:local exon 469067 475822 . - . insertions 12 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 469067 475822 7897 - . alignment_id 0 ; Query GL50803_21897-t26_1-p1 ; Align 475823 2 4539 ; Align 471284 1517 408 ; Align 470864 1653 1797 utg308_pilon exonerate:protein2genome:local gene 524494 524853 229 - . gene_id 0 ; sequence GL50803_21906-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 524494 524853 . - . utg308_pilon exonerate:protein2genome:local exon 524494 524853 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 524494 524853 229 - . alignment_id 0 ; Query GL50803_21906-t26_1-p1 ; Align 524854 3 360 utg265_pilon exonerate:protein2genome:local gene 99245 102073 1437 + . gene_id 0 ; sequence GL50803_21924-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 99245 100337 . + . utg265_pilon exonerate:protein2genome:local exon 99245 100337 . + . insertions 15 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 100338 100339 . + . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 100338 100610 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 100609 100610 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 100611 101111 . + . utg265_pilon exonerate:protein2genome:local exon 100611 101111 . + . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local splice5 101112 101113 . + . intron_id 2 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 101112 101675 . + . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 101674 101675 . + . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 101676 102073 . + . utg265_pilon exonerate:protein2genome:local exon 101676 102073 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 99245 102073 1437 + . alignment_id 0 ; Query GL50803_21924-t26_1-p1 ; Align 99245 1 438 ; Align 99698 147 639 ; Align 100613 361 51 ; Align 100664 382 447 ; Align 101678 532 396 utg11_pilon exonerate:protein2genome:local gene 1676974 1677291 304 - . gene_id 0 ; sequence GL50803_21938-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1676974 1677291 . - . utg11_pilon exonerate:protein2genome:local exon 1676974 1677291 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1676974 1677291 304 - . alignment_id 0 ; Query GL50803_21938-t26_1-p1 ; Align 1677292 3 318 utg11_pilon exonerate:protein2genome:local gene 1677979 1678149 177 - . gene_id 0 ; sequence GL50803_21939-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1677979 1678149 . - . utg11_pilon exonerate:protein2genome:local exon 1677979 1678149 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1677979 1678149 177 - . alignment_id 0 ; Query GL50803_21939-t26_1-p1 ; Align 1678150 1 171 utg11_pilon exonerate:protein2genome:local gene 1691765 1693111 2257 + . gene_id 0 ; sequence GL50803_21942-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1691765 1693111 . + . utg11_pilon exonerate:protein2genome:local exon 1691765 1693111 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1691765 1693111 2257 + . alignment_id 0 ; Query GL50803_21942-t26_1-p1 ; Align 1691765 1 1347 utg11_pilon exonerate:protein2genome:local gene 1696533 1696985 755 + . gene_id 0 ; sequence GL50803_21943-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1696533 1696985 . + . utg11_pilon exonerate:protein2genome:local exon 1696533 1696985 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1696533 1696985 755 + . alignment_id 0 ; Query GL50803_21943-t26_1-p1 ; Align 1696533 3 453 utg18_pilon exonerate:protein2genome:local gene 475084 476334 2049 + . gene_id 0 ; sequence GL50803_21971-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 475084 476334 . + . utg18_pilon exonerate:protein2genome:local exon 475084 476334 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 475084 476334 2049 + . alignment_id 0 ; Query GL50803_21971-t26_1-p1 ; Align 475084 1 1251 utg731_pilon exonerate:protein2genome:local gene 1569053 1570600 2522 + . gene_id 0 ; sequence GL50803_2198-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1569053 1570600 . + . utg731_pilon exonerate:protein2genome:local exon 1569053 1570600 . + . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1569053 1570600 2522 + . alignment_id 0 ; Query GL50803_2198-t26_1-p1 ; Align 1569053 1 483 ; Align 1569545 162 1056 utg11_pilon exonerate:protein2genome:local gene 1112639 1114219 1824 + . gene_id 0 ; sequence GL50803_22003-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1112639 1114219 . + . utg11_pilon exonerate:protein2genome:local exon 1112639 1114219 . + . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 1112639 1114219 1824 + . alignment_id 0 ; Query GL50803_22003-t26_1-p1 ; Align 1112639 302 465 ; Align 1113104 458 1038 ; Align 1114142 806 51 ; Align 1114193 824 27 utg47_pilon exonerate:protein2genome:local gene 2286871 2287593 917 - . gene_id 0 ; sequence GL50803_2201-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2286871 2287593 . - . utg47_pilon exonerate:protein2genome:local exon 2286871 2287593 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2286871 2287593 917 - . alignment_id 0 ; Query GL50803_2201-t26_1-p1 ; Align 2287594 1 540 ; Align 2287054 182 183 utg11_pilon exonerate:protein2genome:local gene 888217 888606 324 - . gene_id 0 ; sequence GL50803_22016-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 888217 888606 . - . utg11_pilon exonerate:protein2genome:local exon 888217 888606 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 888217 888606 324 - . alignment_id 0 ; Query GL50803_22016-t26_1-p1 ; Align 888607 4 390 utg11_pilon exonerate:protein2genome:local gene 687253 688476 1217 + . gene_id 0 ; sequence GL50803_22027-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 687253 688476 . + . utg11_pilon exonerate:protein2genome:local exon 687253 688476 . + . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 687253 688476 1217 + . alignment_id 0 ; Query GL50803_22027-t26_1-p1 ; Align 687253 1 420 ; Align 687673 142 681 ; Align 688357 369 120 utg18_pilon exonerate:protein2genome:local gene 103209 105278 2774 - . gene_id 0 ; sequence GL50803_22084-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 103209 105278 . - . utg18_pilon exonerate:protein2genome:local exon 103209 105278 . - . insertions 6 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 103209 105278 2774 - . alignment_id 0 ; Query GL50803_22084-t26_1-p1 ; Align 105279 1 663 ; Align 104613 222 24 ; Align 104586 230 1377 utg11_pilon exonerate:protein2genome:local gene 1002559 1002930 500 - . gene_id 0 ; sequence GL50803_22112-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1002559 1002930 . - . utg11_pilon exonerate:protein2genome:local exon 1002559 1002930 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1002559 1002930 500 - . alignment_id 0 ; Query GL50803_22112-t26_1-p1 ; Align 1002931 1 372 utg212_pilon exonerate:protein2genome:local gene 57050 164334 174 - . gene_id 0 ; sequence GL50803_22124-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 164220 164334 . - . utg212_pilon exonerate:protein2genome:local exon 164220 164334 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 164218 164219 . - . intron_id 1 ; splice_site "GC" utg212_pilon exonerate:protein2genome:local intron 57208 164219 . - . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 57208 57209 . - . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 57050 57207 . - . utg212_pilon exonerate:protein2genome:local exon 57050 57207 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 57050 164334 174 - . alignment_id 0 ; Query GL50803_22124-t26_1-p1 ; Align 164335 5 114 ; Align 57206 44 156 utg18_pilon exonerate:protein2genome:local gene 145676 146782 1696 - . gene_id 0 ; sequence GL50803_22136-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 145676 146782 . - . utg18_pilon exonerate:protein2genome:local exon 145676 146782 . - . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 145676 146782 1696 - . alignment_id 0 ; Query GL50803_22136-t26_1-p1 ; Align 146783 2 510 ; Align 146273 174 597 utg18_pilon exonerate:protein2genome:local gene 147205 148730 1990 + . gene_id 0 ; sequence GL50803_22138-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 147205 148730 . + . utg18_pilon exonerate:protein2genome:local exon 147205 148730 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local similarity 147205 148730 1990 + . alignment_id 0 ; Query GL50803_22138-t26_1-p1 ; Align 147205 1 183 ; Align 147388 63 3 ; Align 147393 64 1338 utg18_pilon exonerate:protein2genome:local gene 150591 150743 220 - . gene_id 0 ; sequence GL50803_22139-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 150591 150743 . - . utg18_pilon exonerate:protein2genome:local exon 150591 150743 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 150591 150743 220 - . alignment_id 0 ; Query GL50803_22139-t26_1-p1 ; Align 150744 1 153 utg99_pilon exonerate:protein2genome:local gene 34864 35934 1825 - . gene_id 0 ; sequence GL50803_22165-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 34864 35934 . - . utg99_pilon exonerate:protein2genome:local exon 34864 35934 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 34864 35934 1825 - . alignment_id 0 ; Query GL50803_22165-t26_1-p1 ; Align 35935 1 1071 utg265_pilon exonerate:protein2genome:local gene 669153 672689 4400 + . gene_id 0 ; sequence GL50803_221689-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 669153 672689 . + . utg265_pilon exonerate:protein2genome:local exon 669153 672689 . + . insertions 9 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 669153 672689 4400 + . alignment_id 0 ; Query GL50803_221689-t26_1-p1 ; Align 669153 1 570 ; Align 669723 195 285 ; Align 670011 290 885 ; Align 670902 585 1788 utg731_pilon exonerate:protein2genome:local gene 56698 56844 199 - . gene_id 0 ; sequence GL50803_221690-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 56698 56844 . - . utg731_pilon exonerate:protein2genome:local exon 56698 56844 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 56698 56844 199 - . alignment_id 0 ; Query GL50803_221690-t26_1-p1 ; Align 56845 1 147 utg349_pilon exonerate:protein2genome:local gene 284154 286178 2573 + . gene_id 0 ; sequence GL50803_221691-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 284154 286178 . + . utg349_pilon exonerate:protein2genome:local exon 284154 286178 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 284154 286178 2573 + . alignment_id 0 ; Query GL50803_221691-t26_1-p1 ; Align 284154 1 1038 ; Align 285192 348 966 ; Align 286158 671 21 utg308_pilon exonerate:protein2genome:local gene 59606 61228 2579 - . gene_id 0 ; sequence GL50803_221692-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 59606 61228 . - . utg308_pilon exonerate:protein2genome:local exon 59606 61228 . - . insertions 12 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 59606 61228 2579 - . alignment_id 0 ; Query GL50803_221692-t26_1-p1 ; Align 61229 1 1242 ; Align 59987 416 186 ; Align 59789 478 183 utg47_pilon exonerate:protein2genome:local gene 39541 2029080 1758 + . gene_id 0 ; sequence GL50803_221693-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 39541 39713 . + . utg47_pilon exonerate:protein2genome:local exon 39541 39713 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 39714 39715 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 39714 167086 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 167085 167086 . + . intron_id 0 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local cds 167087 167326 . + . utg47_pilon exonerate:protein2genome:local exon 167087 167326 . + . insertions 6 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 167327 167328 . + . intron_id 2 ; splice_site "CA" utg47_pilon exonerate:protein2genome:local intron 167327 168154 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 168153 168154 . + . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 168155 168193 . + . utg47_pilon exonerate:protein2genome:local exon 168155 168193 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 168194 168195 . + . intron_id 3 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 168194 178531 . + . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 178530 178531 . + . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 178532 178849 . + . utg47_pilon exonerate:protein2genome:local exon 178532 178849 . + . insertions 0 ; deletions 7 utg47_pilon exonerate:protein2genome:local splice5 178850 178851 . + . intron_id 4 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 178850 334019 . + . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 334018 334019 . + . intron_id 3 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 334020 334861 . + . utg47_pilon exonerate:protein2genome:local exon 334020 334861 . + . insertions 3 ; deletions 5 utg47_pilon exonerate:protein2genome:local splice5 334862 334863 . + . intron_id 5 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local intron 334862 391348 . + . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 391347 391348 . + . intron_id 4 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 391349 391619 . + . utg47_pilon exonerate:protein2genome:local exon 391349 391619 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 391620 391621 . + . intron_id 6 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 391620 529338 . + . intron_id 6 utg47_pilon exonerate:protein2genome:local splice3 529337 529338 . + . intron_id 5 ; splice_site "CC" utg47_pilon exonerate:protein2genome:local cds 529339 529392 . + . utg47_pilon exonerate:protein2genome:local exon 529339 529392 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 529393 529394 . + . intron_id 7 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 529393 718225 . + . intron_id 7 utg47_pilon exonerate:protein2genome:local splice3 718224 718225 . + . intron_id 6 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 718226 718654 . + . utg47_pilon exonerate:protein2genome:local exon 718226 718654 . + . insertions 0 ; deletions 7 utg47_pilon exonerate:protein2genome:local splice5 718655 718656 . + . intron_id 8 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 718655 823828 . + . intron_id 8 utg47_pilon exonerate:protein2genome:local splice3 823827 823828 . + . intron_id 7 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 823829 824091 . + . utg47_pilon exonerate:protein2genome:local exon 823829 824091 . + . insertions 3 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 824092 824093 . + . intron_id 9 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 824092 979154 . + . intron_id 9 utg47_pilon exonerate:protein2genome:local splice3 979153 979154 . + . intron_id 8 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 979155 979409 . + . utg47_pilon exonerate:protein2genome:local exon 979155 979409 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 979410 979411 . + . intron_id 10 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 979410 1032914 . + . intron_id 10 utg47_pilon exonerate:protein2genome:local splice3 1032913 1032914 . + . intron_id 9 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 1032915 1032937 . + . utg47_pilon exonerate:protein2genome:local exon 1032915 1032937 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1032938 1032939 . + . intron_id 11 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 1032938 1208632 . + . intron_id 11 utg47_pilon exonerate:protein2genome:local splice3 1208631 1208632 . + . intron_id 10 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 1208633 1208725 . + . utg47_pilon exonerate:protein2genome:local exon 1208633 1208725 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 1208726 1208727 . + . intron_id 12 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 1208726 1379091 . + . intron_id 12 utg47_pilon exonerate:protein2genome:local splice3 1379090 1379091 . + . intron_id 11 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1379092 1379614 . + . utg47_pilon exonerate:protein2genome:local exon 1379092 1379614 . + . insertions 3 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1379615 1379616 . + . intron_id 13 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1379615 1409165 . + . intron_id 13 utg47_pilon exonerate:protein2genome:local splice3 1409164 1409165 . + . intron_id 12 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1409166 1409749 . + . utg47_pilon exonerate:protein2genome:local exon 1409166 1409749 . + . insertions 18 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1409750 1409751 . + . intron_id 14 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1409750 1555765 . + . intron_id 14 utg47_pilon exonerate:protein2genome:local splice3 1555764 1555765 . + . intron_id 13 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1555766 1556048 . + . utg47_pilon exonerate:protein2genome:local exon 1555766 1556048 . + . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local splice5 1556049 1556050 . + . intron_id 15 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 1556049 1690612 . + . intron_id 15 utg47_pilon exonerate:protein2genome:local splice3 1690611 1690612 . + . intron_id 14 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 1690613 1690723 . + . utg47_pilon exonerate:protein2genome:local exon 1690613 1690723 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1690724 1690725 . + . intron_id 16 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1690724 1690922 . + . intron_id 16 utg47_pilon exonerate:protein2genome:local splice3 1690921 1690922 . + . intron_id 15 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1690923 1691150 . + . utg47_pilon exonerate:protein2genome:local exon 1690923 1691150 . + . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 1691151 1691152 . + . intron_id 17 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 1691151 1692818 . + . intron_id 17 utg47_pilon exonerate:protein2genome:local splice3 1692817 1692818 . + . intron_id 16 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 1692819 1692997 . + . utg47_pilon exonerate:protein2genome:local exon 1692819 1692997 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1692998 1692999 . + . intron_id 18 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1692998 1850247 . + . intron_id 18 utg47_pilon exonerate:protein2genome:local splice3 1850246 1850247 . + . intron_id 17 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1850248 1850387 . + . utg47_pilon exonerate:protein2genome:local exon 1850248 1850387 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1850388 1850389 . + . intron_id 19 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1850388 1960829 . + . intron_id 19 utg47_pilon exonerate:protein2genome:local splice3 1960828 1960829 . + . intron_id 18 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1960830 1961053 . + . utg47_pilon exonerate:protein2genome:local exon 1960830 1961053 . + . insertions 3 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 1961054 1961055 . + . intron_id 20 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 1961054 2027851 . + . intron_id 20 utg47_pilon exonerate:protein2genome:local splice3 2027850 2027851 . + . intron_id 19 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2027852 2029080 . + . utg47_pilon exonerate:protein2genome:local exon 2027852 2029080 . + . insertions 18 ; deletions 12 utg47_pilon exonerate:protein2genome:local similarity 39541 2029080 1758 + . alignment_id 0 ; Query GL50803_221693-t26_1-p1 ; Align 39541 60 132 ; Align 39673 105 39 ; Align 167088 119 111 ; Align 167199 158 57 ; Align 167262 177 63 ; Align 168156 199 27 ; Align 168183 209 9 ; Align 178533 213 96 ; Align 178629 247 81 ; Align 178710 276 33 ; Align 178743 288 60 ; Align 178803 310 45 ; Align 334021 326 147 ; Align 334168 377 90 ; Align 334258 408 27 ; Align 334285 418 66 ; Align 334351 441 429 ; Align 334783 584 78 ; Align 391351 611 195 ; Align 391546 678 72 ; Align 529340 703 51 ; Align 718227 721 96 ; Align 718323 755 75 ; Align 718398 781 9 ; Align 718407 785 102 ; Align 718509 820 42 ; Align 718551 836 102 ; Align 823830 871 132 ; Align 823965 915 63 ; Align 824028 938 63 ; Align 979157 960 252 ; Align 1032917 1045 21 ; Align 1208633 1052 42 ; Align 1208675 1067 51 ; Align 1379092 1084 339 ; Align 1379431 1199 114 ; Align 1379548 1237 66 ; Align 1409168 1260 159 ; Align 1409333 1313 87 ; Align 1409420 1344 210 ; Align 1409639 1414 54 ; Align 1409696 1432 54 ; Align 1555766 1450 84 ; Align 1555850 1480 87 ; Align 1555937 1511 33 ; Align 1555970 1523 78 ; Align 1690615 1550 63 ; Align 1690681 1571 42 ; Align 1690925 1586 102 ; Align 1691027 1622 60 ; Align 1691087 1643 63 ; Align 1692821 1665 84 ; Align 1692908 1693 90 ; Align 1850248 1723 138 ; Align 1960831 1770 69 ; Align 1960903 1793 108 ; Align 1961011 1830 42 ; Align 2027854 1845 162 ; Align 2028016 1900 57 ; Align 2028073 1922 75 ; Align 2028151 1947 123 ; Align 2028274 1992 54 ; Align 2028328 2011 36 ; Align 2028367 2023 390 ; Align 2028766 2153 72 ; Align 2028838 2180 105 ; Align 2028946 2215 135 utg47_pilon exonerate:protein2genome:local gene 1338815 1339993 1421 + . gene_id 0 ; sequence GL50803_2217-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1338815 1339993 . + . utg47_pilon exonerate:protein2genome:local exon 1338815 1339993 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1338815 1339993 1421 + . alignment_id 0 ; Query GL50803_2217-t26_1-p1 ; Align 1338815 1 387 ; Align 1339202 131 792 utg47_pilon exonerate:protein2genome:local gene 1874878 1876626 2655 - . gene_id 0 ; sequence GL50803_22204-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1874878 1876626 . - . utg47_pilon exonerate:protein2genome:local exon 1874878 1876626 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1874878 1876626 2655 - . alignment_id 0 ; Query GL50803_22204-t26_1-p1 ; Align 1876627 1 1701 ; Align 1874923 568 45 utg731_pilon exonerate:protein2genome:local gene 997830 997937 110 - . gene_id 0 ; sequence GL50803_22232-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 997830 997937 . - . utg731_pilon exonerate:protein2genome:local exon 997830 997937 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 997830 997937 110 - . alignment_id 0 ; Query GL50803_22232-t26_1-p1 ; Align 997938 1 108 utg47_pilon exonerate:protein2genome:local gene 1759591 1759746 158 - . gene_id 0 ; sequence GL50803_2224-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1759591 1759746 . - . utg47_pilon exonerate:protein2genome:local exon 1759591 1759746 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1759591 1759746 158 - . alignment_id 0 ; Query GL50803_2224-t26_1-p1 ; Align 1759747 1 156 utg47_pilon exonerate:protein2genome:local gene 1758206 1758724 352 - . gene_id 0 ; sequence GL50803_2226-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1758206 1758724 . - . utg47_pilon exonerate:protein2genome:local exon 1758206 1758724 . - . insertions 15 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1758206 1758724 352 - . alignment_id 0 ; Query GL50803_2226-t26_1-p1 ; Align 1758725 1 168 ; Align 1758542 57 336 utg731_pilon exonerate:protein2genome:local gene 802567 806379 4774 - . gene_id 0 ; sequence GL50803_22268-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 802567 806379 . - . utg731_pilon exonerate:protein2genome:local exon 802567 806379 . - . insertions 12 ; deletions 6 utg731_pilon exonerate:protein2genome:local similarity 802567 806379 4774 - . alignment_id 0 ; Query GL50803_22268-t26_1-p1 ; Align 806380 1 237 ; Align 806143 82 57 ; Align 806086 102 2043 ; Align 804043 784 57 ; Align 803986 805 765 ; Align 803218 1060 564 ; Align 802645 1248 78 utg18_pilon exonerate:protein2genome:local gene 375658 375795 146 - . gene_id 0 ; sequence GL50803_22279-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 375658 375795 . - . utg18_pilon exonerate:protein2genome:local exon 375658 375795 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 375658 375795 146 - . alignment_id 0 ; Query GL50803_22279-t26_1-p1 ; Align 375796 1 138 utg47_pilon exonerate:protein2genome:local gene 1757648 1757776 148 + . gene_id 0 ; sequence GL50803_2228-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1757648 1757776 . + . utg47_pilon exonerate:protein2genome:local exon 1757648 1757776 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1757648 1757776 148 + . alignment_id 0 ; Query GL50803_2228-t26_1-p1 ; Align 1757648 1 129 utg11_pilon exonerate:protein2genome:local gene 1419917 1421302 2262 - . gene_id 0 ; sequence GL50803_22291-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1419917 1421302 . - . utg11_pilon exonerate:protein2genome:local exon 1419917 1421302 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1419917 1421302 2262 - . alignment_id 0 ; Query GL50803_22291-t26_1-p1 ; Align 1421303 1 342 ; Align 1420958 115 1041 utg99_pilon exonerate:protein2genome:local gene 380383 380556 203 + . gene_id 0 ; sequence GL50803_22303-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 380383 380556 . + . utg99_pilon exonerate:protein2genome:local exon 380383 380556 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 380383 380556 203 + . alignment_id 0 ; Query GL50803_22303-t26_1-p1 ; Align 380383 1 174 utg99_pilon exonerate:protein2genome:local gene 372283 373534 1131 - . gene_id 0 ; sequence GL50803_22308-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 372283 373534 . - . utg99_pilon exonerate:protein2genome:local exon 372283 373534 . - . insertions 9 ; deletions 0 ; frameshifts 1 utg99_pilon exonerate:protein2genome:local similarity 372283 373534 1131 - . alignment_id 0 ; Query GL50803_22308-t26_1-p1 ; Align 373535 232 162 ; Align 373372 286 444 ; Align 372925 434 147 ; Align 372772 483 489 utg47_pilon exonerate:protein2genome:local gene 690777 692041 1943 + . gene_id 0 ; sequence GL50803_22338-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 690777 692041 . + . utg47_pilon exonerate:protein2genome:local exon 690777 692041 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 690777 692041 1943 + . alignment_id 0 ; Query GL50803_22338-t26_1-p1 ; Align 690777 1 1185 ; Align 691964 397 78 utg731_pilon exonerate:protein2genome:local gene 1205526 1207334 2088 - . gene_id 0 ; sequence GL50803_22385-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1205526 1207334 . - . utg731_pilon exonerate:protein2genome:local exon 1205526 1207334 . - . insertions 6 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1205526 1207334 2088 - . alignment_id 0 ; Query GL50803_22385-t26_1-p1 ; Align 1207335 370 183 ; Align 1207152 432 255 ; Align 1206897 519 114 ; Align 1206777 557 1251 utg349_pilon exonerate:protein2genome:local gene 52524 53534 1700 - . gene_id 0 ; sequence GL50803_22394-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 52524 53534 . - . utg349_pilon exonerate:protein2genome:local exon 52524 53534 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 52524 53534 1700 - . alignment_id 0 ; Query GL50803_22394-t26_1-p1 ; Align 53535 1 1011 utg47_pilon exonerate:protein2genome:local gene 1991846 1993567 1598 - . gene_id 0 ; sequence GL50803_22439-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1991846 1993567 . - . utg47_pilon exonerate:protein2genome:local exon 1991846 1993567 . - . insertions 12 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1991846 1993567 1598 - . alignment_id 0 ; Query GL50803_22439-t26_1-p1 ; Align 1993568 9 384 ; Align 1993184 138 267 ; Align 1992917 228 432 ; Align 1992473 372 627 utg349_pilon exonerate:protein2genome:local gene 843973 847056 4098 + . gene_id 0 ; sequence GL50803_22451-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 843973 844698 . + . utg349_pilon exonerate:protein2genome:local exon 843973 844698 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 844699 844700 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 844699 844731 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 844730 844731 . + . intron_id 0 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local cds 844732 847056 . + . utg349_pilon exonerate:protein2genome:local exon 844732 847056 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 843973 847056 4098 + . alignment_id 0 ; Query GL50803_22451-t26_1-p1 ; Align 843973 1 726 ; Align 844732 243 2325 utg349_pilon exonerate:protein2genome:local gene 842989 843471 703 - . gene_id 0 ; sequence GL50803_22454-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 842989 843471 . - . utg349_pilon exonerate:protein2genome:local exon 842989 843471 . - . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 842989 843471 703 - . alignment_id 0 ; Query GL50803_22454-t26_1-p1 ; Align 843472 1 396 ; Align 843076 135 87 utg349_pilon exonerate:protein2genome:local gene 840907 842892 2056 - . gene_id 0 ; sequence GL50803_22455-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 841748 842892 . - . utg349_pilon exonerate:protein2genome:local exon 841748 842892 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 841746 841747 . - . intron_id 1 ; splice_site "TT" utg349_pilon exonerate:protein2genome:local intron 841607 841747 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 841607 841608 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 840907 841606 . - . utg349_pilon exonerate:protein2genome:local exon 840907 841606 . - . insertions 15 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 840907 842892 2056 - . alignment_id 0 ; Query GL50803_22455-t26_1-p1 ; Align 842893 1 762 ; Align 842131 256 381 ; Align 841606 384 531 ; Align 841060 561 153 utg349_pilon exonerate:protein2genome:local gene 622639 622956 474 - . gene_id 0 ; sequence GL50803_22504-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 622639 622956 . - . utg349_pilon exonerate:protein2genome:local exon 622639 622956 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 622639 622956 474 - . alignment_id 0 ; Query GL50803_22504-t26_1-p1 ; Align 622957 1 318 utg349_pilon exonerate:protein2genome:local gene 440420 440686 259 - . gene_id 0 ; sequence GL50803_22516-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 440420 440686 . - . utg349_pilon exonerate:protein2genome:local exon 440420 440686 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 440420 440686 259 - . alignment_id 0 ; Query GL50803_22516-t26_1-p1 ; Align 440687 1 267 utg47_pilon exonerate:protein2genome:local gene 2067062 2071015 5142 - . gene_id 0 ; sequence GL50803_22543-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2067062 2071015 . - . utg47_pilon exonerate:protein2genome:local exon 2067062 2071015 . - . insertions 27 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2067062 2071015 5142 - . alignment_id 0 ; Query GL50803_22543-t26_1-p1 ; Align 2071016 1 207 ; Align 2070809 71 1947 ; Align 2068850 720 537 ; Align 2068298 899 1236 utg47_pilon exonerate:protein2genome:local gene 2101267 2104338 4665 - . gene_id 0 ; sequence GL50803_22547-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2101267 2104338 . - . utg47_pilon exonerate:protein2genome:local exon 2101267 2104338 . - . insertions 6 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2101267 2104338 4665 - . alignment_id 0 ; Query GL50803_22547-t26_1-p1 ; Align 2104339 3 1575 ; Align 2102764 529 765 ; Align 2101993 784 726 utg47_pilon exonerate:protein2genome:local gene 2129914 2131632 2294 - . gene_id 0 ; sequence GL50803_22553-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2129914 2131632 . - . utg47_pilon exonerate:protein2genome:local exon 2129914 2131632 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2129914 2131632 2294 - . alignment_id 0 ; Query GL50803_22553-t26_1-p1 ; Align 2131633 1 1719 utg47_pilon exonerate:protein2genome:local gene 2239470 2246078 8554 + . gene_id 0 ; sequence GL50803_22573-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2239470 2244605 . + . utg47_pilon exonerate:protein2genome:local exon 2239470 2244605 . + . insertions 3 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 2244606 2244607 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 2244606 2244662 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 2244661 2244662 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2244663 2246078 . + . utg47_pilon exonerate:protein2genome:local exon 2244663 2246078 . + . insertions 12 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 2239470 2246078 8554 + . alignment_id 0 ; Query GL50803_22573-t26_1-p1 ; Align 2239470 1 3054 ; Align 2242524 1020 1635 ; Align 2244162 1565 444 ; Align 2244663 1713 24 ; Align 2244687 1722 543 ; Align 2245230 1904 564 ; Align 2245806 2092 273 utg349_pilon exonerate:protein2genome:local gene 1280658 1282661 2693 - . gene_id 0 ; sequence GL50803_22587-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1280658 1282661 . - . utg349_pilon exonerate:protein2genome:local exon 1280658 1282661 . - . insertions 0 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 1280658 1282661 2693 - . alignment_id 0 ; Query GL50803_22587-t26_1-p1 ; Align 1282662 1 984 ; Align 1281678 331 369 ; Align 1281309 458 651 utg349_pilon exonerate:protein2genome:local gene 1527386 1527580 140 + . gene_id 0 ; sequence GL50803_22594-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1527386 1527580 . + . utg349_pilon exonerate:protein2genome:local exon 1527386 1527580 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1527386 1527580 140 + . alignment_id 0 ; Query GL50803_22594-t26_1-p1 ; Align 1527386 1 195 utg349_pilon exonerate:protein2genome:local gene 1521797 1521991 140 - . gene_id 0 ; sequence GL50803_22594-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1521797 1521991 . - . utg349_pilon exonerate:protein2genome:local exon 1521797 1521991 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1521797 1521991 140 - . alignment_id 0 ; Query GL50803_22594-t26_1-p1 ; Align 1521992 1 195 utg47_pilon exonerate:protein2genome:local gene 455957 457864 2452 + . gene_id 0 ; sequence GL50803_2261-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 455957 457864 . + . utg47_pilon exonerate:protein2genome:local exon 455957 457864 . + . insertions 0 ; deletions 2 ; frameshifts 3 utg47_pilon exonerate:protein2genome:local similarity 455957 457864 2452 + . alignment_id 0 ; Query GL50803_2261-t26_1-p1 ; Align 455957 1 225 ; Align 456182 77 12 ; Align 456195 81 1059 ; Align 457256 435 609 utg99_pilon exonerate:protein2genome:local gene 347094 348479 1852 + . gene_id 0 ; sequence GL50803_22629-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 347094 348479 . + . utg99_pilon exonerate:protein2genome:local exon 347094 348479 . + . insertions 0 ; deletions 5 utg99_pilon exonerate:protein2genome:local similarity 347094 348479 1852 + . alignment_id 0 ; Query GL50803_22629-t26_1-p1 ; Align 347094 1 486 ; Align 347580 167 837 ; Align 348417 447 63 utg99_pilon exonerate:protein2genome:local gene 338307 338477 177 - . gene_id 0 ; sequence GL50803_22632-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 338307 338477 . - . utg99_pilon exonerate:protein2genome:local exon 338307 338477 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 338307 338477 177 - . alignment_id 0 ; Query GL50803_22632-t26_1-p1 ; Align 338478 1 171 utg64_pilon exonerate:protein2genome:local gene 226724 226837 150 - . gene_id 0 ; sequence GL50803_22655-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 226724 226837 . - . utg64_pilon exonerate:protein2genome:local exon 226724 226837 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 226724 226837 150 - . alignment_id 0 ; Query GL50803_22655-t26_1-p1 ; Align 226838 1 114 utg731_pilon exonerate:protein2genome:local gene 1570962 1571669 941 + . gene_id 0 ; sequence GL50803_2267-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1570962 1571669 . + . utg731_pilon exonerate:protein2genome:local exon 1570962 1571669 . + . insertions 6 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1570962 1571669 941 + . alignment_id 0 ; Query GL50803_2267-t26_1-p1 ; Align 1570962 1 270 ; Align 1571232 92 48 ; Align 1571286 108 384 utg47_pilon exonerate:protein2genome:local gene 2043778 2044569 1256 + . gene_id 0 ; sequence GL50803_22677-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2043778 2044569 . + . utg47_pilon exonerate:protein2genome:local exon 2043778 2044569 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2043778 2044569 1256 + . alignment_id 0 ; Query GL50803_22677-t26_1-p1 ; Align 2043778 1 792 utg47_pilon exonerate:protein2genome:local gene 1020043 1020171 106 - . gene_id 0 ; sequence GL50803_22729-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1020043 1020171 . - . utg47_pilon exonerate:protein2genome:local exon 1020043 1020171 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1020043 1020171 106 - . alignment_id 0 ; Query GL50803_22729-t26_1-p1 ; Align 1020172 1 129 utg47_pilon exonerate:protein2genome:local gene 1008991 1009167 207 + . gene_id 0 ; sequence GL50803_22731-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1008991 1009167 . + . utg47_pilon exonerate:protein2genome:local exon 1008991 1009167 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1008991 1009167 207 + . alignment_id 0 ; Query GL50803_22731-t26_1-p1 ; Align 1008991 1 177 utg349_pilon exonerate:protein2genome:local gene 1414220 1415221 1257 + . gene_id 0 ; sequence GL50803_22739-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1414220 1415221 . + . utg349_pilon exonerate:protein2genome:local exon 1414220 1415221 . + . insertions 15 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1414220 1415221 1257 + . alignment_id 0 ; Query GL50803_22739-t26_1-p1 ; Align 1414220 1 558 ; Align 1414784 187 42 ; Align 1414835 201 387 utg731_pilon exonerate:protein2genome:local gene 1236293 1477141 937 + . gene_id 0 ; sequence GL50803_227577-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1236293 1236381 . + . utg731_pilon exonerate:protein2genome:local exon 1236293 1236381 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local splice5 1236382 1236383 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1236382 1324610 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1324609 1324610 . + . intron_id 0 ; splice_site "GG" utg731_pilon exonerate:protein2genome:local cds 1324611 1324646 . + . utg731_pilon exonerate:protein2genome:local exon 1324611 1324646 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1324647 1324648 . + . intron_id 2 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local intron 1324647 1475236 . + . intron_id 2 utg731_pilon exonerate:protein2genome:local splice3 1475235 1475236 . + . intron_id 1 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1475237 1476254 . + . utg731_pilon exonerate:protein2genome:local exon 1475237 1476254 . + . insertions 18 ; deletions 8 utg731_pilon exonerate:protein2genome:local splice5 1476255 1476256 . + . intron_id 3 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1476255 1476484 . + . intron_id 3 utg731_pilon exonerate:protein2genome:local splice3 1476483 1476484 . + . intron_id 2 ; splice_site "GG" utg731_pilon exonerate:protein2genome:local cds 1476485 1477141 . + . utg731_pilon exonerate:protein2genome:local exon 1476485 1477141 . + . insertions 12 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1236293 1477141 937 + . alignment_id 0 ; Query GL50803_227577-t26_1-p1 ; Align 1236293 2 45 ; Align 1236338 18 42 ; Align 1324612 33 33 ; Align 1475238 45 93 ; Align 1475331 77 30 ; Align 1475361 89 15 ; Align 1475376 95 78 ; Align 1475454 122 126 ; Align 1475586 164 93 ; Align 1475679 196 126 ; Align 1475811 238 93 ; Align 1475904 270 126 ; Align 1476036 312 93 ; Align 1476129 344 126 ; Align 1476485 386 93 ; Align 1476578 418 126 ; Align 1476710 460 93 ; Align 1476803 492 126 ; Align 1476935 534 93 ; Align 1477028 566 114 utg349_pilon exonerate:protein2genome:local gene 894426 894656 193 + . gene_id 0 ; sequence GL50803_22776-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 894426 894656 . + . utg349_pilon exonerate:protein2genome:local exon 894426 894656 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 894426 894656 193 + . alignment_id 0 ; Query GL50803_22776-t26_1-p1 ; Align 894426 5 231 utg64_pilon exonerate:protein2genome:local gene 103012 103764 1116 - . gene_id 0 ; sequence GL50803_22802-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 103012 103764 . - . utg64_pilon exonerate:protein2genome:local exon 103012 103764 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 103012 103764 1116 - . alignment_id 0 ; Query GL50803_22802-t26_1-p1 ; Align 103765 1 753 utg64_pilon exonerate:protein2genome:local gene 107904 108905 1615 + . gene_id 0 ; sequence GL50803_22806-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 107904 108905 . + . utg64_pilon exonerate:protein2genome:local exon 107904 108905 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 107904 108905 1615 + . alignment_id 0 ; Query GL50803_22806-t26_1-p1 ; Align 107904 1 1002 utg64_pilon exonerate:protein2genome:local gene 120485 123364 3825 - . gene_id 0 ; sequence GL50803_22808-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 120485 123364 . - . utg64_pilon exonerate:protein2genome:local exon 120485 123364 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 120485 123364 3825 - . alignment_id 0 ; Query GL50803_22808-t26_1-p1 ; Align 123365 1 2880 utg64_pilon exonerate:protein2genome:local gene 61983 62096 134 - . gene_id 0 ; sequence GL50803_22816-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 61983 62096 . - . utg64_pilon exonerate:protein2genome:local exon 61983 62096 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 61983 62096 134 - . alignment_id 0 ; Query GL50803_22816-t26_1-p1 ; Align 62097 1 114 utg47_pilon exonerate:protein2genome:local gene 1856750 1858582 2351 - . gene_id 0 ; sequence GL50803_2285-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1856750 1858582 . - . utg47_pilon exonerate:protein2genome:local exon 1856750 1858582 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1856750 1858582 2351 - . alignment_id 0 ; Query GL50803_2285-t26_1-p1 ; Align 1858583 1 1833 utg47_pilon exonerate:protein2genome:local gene 453388 454468 1815 - . gene_id 0 ; sequence GL50803_22850-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 453388 454468 . - . utg47_pilon exonerate:protein2genome:local exon 453388 454468 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 453388 454468 1815 - . alignment_id 0 ; Query GL50803_22850-t26_1-p1 ; Align 454469 1 807 ; Align 453661 270 273 utg47_pilon exonerate:protein2genome:local gene 474356 475640 1299 - . gene_id 0 ; sequence GL50803_22855-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 474356 475640 . - . utg47_pilon exonerate:protein2genome:local exon 474356 475640 . - . insertions 6 ; deletions 11 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 474356 475640 1299 - . alignment_id 0 ; Query GL50803_22855-t26_1-p1 ; Align 475641 1 444 ; Align 475197 152 123 ; Align 475074 194 54 ; Align 475020 215 99 ; Align 474915 248 192 ; Align 474722 312 30 ; Align 474692 326 336 utg308_pilon exonerate:protein2genome:local gene 96857 96991 145 + . gene_id 0 ; sequence GL50803_22935-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 96857 96991 . + . utg308_pilon exonerate:protein2genome:local exon 96857 96991 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 96857 96991 145 + . alignment_id 0 ; Query GL50803_22935-t26_1-p1 ; Align 96857 6 135 utg308_pilon exonerate:protein2genome:local gene 24937 25023 109 + . gene_id 0 ; sequence GL50803_22955-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 24937 25023 . + . utg308_pilon exonerate:protein2genome:local exon 24937 25023 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 24937 25023 109 + . alignment_id 0 ; Query GL50803_22955-t26_1-p1 ; Align 24937 12 87 utg349_pilon exonerate:protein2genome:local gene 675684 676172 675 + . gene_id 0 ; sequence GL50803_23004-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 675684 676172 . + . utg349_pilon exonerate:protein2genome:local exon 675684 676172 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 675684 676172 675 + . alignment_id 0 ; Query GL50803_23004-t26_1-p1 ; Align 675684 1 489 utg349_pilon exonerate:protein2genome:local gene 700518 702065 1849 - . gene_id 0 ; sequence GL50803_23015-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 700518 702065 . - . utg349_pilon exonerate:protein2genome:local exon 700518 702065 . - . insertions 0 ; deletions 8 utg349_pilon exonerate:protein2genome:local similarity 700518 702065 1849 - . alignment_id 0 ; Query GL50803_23015-t26_1-p1 ; Align 702066 5 237 ; Align 701829 87 513 ; Align 701316 263 798 utg349_pilon exonerate:protein2genome:local gene 701905 702039 126 - . gene_id 0 ; sequence GL50803_23016-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 701905 702039 . - . utg349_pilon exonerate:protein2genome:local exon 701905 702039 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 701905 702039 126 - . alignment_id 0 ; Query GL50803_23016-t26_1-p1 ; Align 702040 1 135 utg349_pilon exonerate:protein2genome:local gene 702081 703379 1850 + . gene_id 0 ; sequence GL50803_23017-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 702081 703379 . + . utg349_pilon exonerate:protein2genome:local exon 702081 703379 . + . insertions 9 ; deletions 9 utg349_pilon exonerate:protein2genome:local similarity 702081 703379 1850 + . alignment_id 0 ; Query GL50803_23017-t26_1-p1 ; Align 702081 1 732 ; Align 702813 246 153 ; Align 702966 301 93 ; Align 703059 336 126 ; Align 703194 378 186 utg11_pilon exonerate:protein2genome:local gene 755124 756937 2527 - . gene_id 0 ; sequence GL50803_2305-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 755124 756937 . - . utg11_pilon exonerate:protein2genome:local exon 755124 756937 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 755124 756937 2527 - . alignment_id 0 ; Query GL50803_2305-t26_1-p1 ; Align 756938 1 168 ; Align 756770 58 3 ; Align 756765 59 1641 utg308_pilon exonerate:protein2genome:local gene 300336 308085 10066 + . gene_id 0 ; sequence GL50803_23064-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 300336 308085 . + . utg308_pilon exonerate:protein2genome:local exon 300336 308085 . + . insertions 12 ; deletions 4 ; frameshifts 10 utg308_pilon exonerate:protein2genome:local similarity 300336 308085 10066 + . alignment_id 0 ; Query GL50803_23064-t26_1-p1 ; Align 300336 1 2292 ; Align 302633 765 21 ; Align 302659 772 1803 ; Align 304465 1373 177 ; Align 304648 1432 1569 ; Align 306220 1955 753 ; Align 306973 2210 1113 utg308_pilon exonerate:protein2genome:local gene 311786 312574 983 - . gene_id 0 ; sequence GL50803_23079-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 311786 312574 . - . utg308_pilon exonerate:protein2genome:local exon 311786 312574 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 311786 312574 983 - . alignment_id 0 ; Query GL50803_23079-t26_1-p1 ; Align 312575 1 789 utg11_pilon exonerate:protein2genome:local gene 1278435 1278551 101 + . gene_id 0 ; sequence GL50803_23126-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1278435 1278551 . + . utg11_pilon exonerate:protein2genome:local exon 1278435 1278551 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1278435 1278551 101 + . alignment_id 0 ; Query GL50803_23126-t26_1-p1 ; Align 1278435 1 117 utg11_pilon exonerate:protein2genome:local gene 1279446 1279613 200 - . gene_id 0 ; sequence GL50803_23127-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1279446 1279613 . - . utg11_pilon exonerate:protein2genome:local exon 1279446 1279613 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1279446 1279613 200 - . alignment_id 0 ; Query GL50803_23127-t26_1-p1 ; Align 1279614 1 168 utg11_pilon exonerate:protein2genome:local gene 1299892 1300035 119 + . gene_id 0 ; sequence GL50803_23129-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1299892 1300035 . + . utg11_pilon exonerate:protein2genome:local exon 1299892 1300035 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1299892 1300035 119 + . alignment_id 0 ; Query GL50803_23129-t26_1-p1 ; Align 1299892 1 144 utg364_pilon exonerate:protein2genome:local gene 30743 30838 106 - . gene_id 0 ; sequence GL50803_23183-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 30743 30838 . - . utg364_pilon exonerate:protein2genome:local exon 30743 30838 . - . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 30743 30838 106 - . alignment_id 0 ; Query GL50803_23183-t26_1-p1 ; Align 30839 1 96 utg349_pilon exonerate:protein2genome:local gene 1254308 1259020 5860 + . gene_id 0 ; sequence GL50803_23185-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1254308 1259020 . + . utg349_pilon exonerate:protein2genome:local exon 1254308 1259020 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 1254308 1259020 5860 + . alignment_id 0 ; Query GL50803_23185-t26_1-p1 ; Align 1254308 1 2991 ; Align 1257299 999 933 ; Align 1258232 1311 789 utg47_pilon exonerate:protein2genome:local gene 1515531 1515902 562 - . gene_id 0 ; sequence GL50803_23225-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1515531 1515902 . - . utg47_pilon exonerate:protein2genome:local exon 1515531 1515902 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1515531 1515902 562 - . alignment_id 0 ; Query GL50803_23225-t26_1-p1 ; Align 1515903 1 372 utg47_pilon exonerate:protein2genome:local gene 243187 244767 2241 - . gene_id 0 ; sequence GL50803_2323-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 243187 244767 . - . utg47_pilon exonerate:protein2genome:local exon 243187 244767 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 243187 244767 2241 - . alignment_id 0 ; Query GL50803_2323-t26_1-p1 ; Align 244768 12 1581 utg47_pilon exonerate:protein2genome:local gene 1540496 1541842 1886 - . gene_id 0 ; sequence GL50803_23235-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1540496 1541842 . - . utg47_pilon exonerate:protein2genome:local exon 1540496 1541842 . - . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 1540496 1541842 1886 - . alignment_id 0 ; Query GL50803_23235-t26_1-p1 ; Align 1541843 1 1260 ; Align 1540583 422 24 ; Align 1540559 434 63 utg18_pilon exonerate:protein2genome:local gene 188271 188882 749 - . gene_id 0 ; sequence GL50803_2328-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 188271 188882 . - . utg18_pilon exonerate:protein2genome:local exon 188271 188882 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 188271 188882 749 - . alignment_id 0 ; Query GL50803_2328-t26_1-p1 ; Align 188883 1 612 utg731_pilon exonerate:protein2genome:local gene 1011570 1011821 404 + . gene_id 0 ; sequence GL50803_23300-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1011570 1011821 . + . utg731_pilon exonerate:protein2genome:local exon 1011570 1011821 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1011570 1011821 404 + . alignment_id 0 ; Query GL50803_23300-t26_1-p1 ; Align 1011570 3 252 utg731_pilon exonerate:protein2genome:local gene 1052391 1054085 2433 + . gene_id 0 ; sequence GL50803_23314-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1052391 1054085 . + . utg731_pilon exonerate:protein2genome:local exon 1052391 1054085 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1052391 1054085 2433 + . alignment_id 0 ; Query GL50803_23314-t26_1-p1 ; Align 1052391 1 1695 utg731_pilon exonerate:protein2genome:local gene 1078837 1079052 373 + . gene_id 0 ; sequence GL50803_23325-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1078837 1079052 . + . utg731_pilon exonerate:protein2genome:local exon 1078837 1079052 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1078837 1079052 373 + . alignment_id 0 ; Query GL50803_23325-t26_1-p1 ; Align 1078837 1 216 utg731_pilon exonerate:protein2genome:local gene 1121580 1122335 1075 - . gene_id 0 ; sequence GL50803_23330-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1121580 1122335 . - . utg731_pilon exonerate:protein2genome:local exon 1121580 1122335 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1121580 1122335 1075 - . alignment_id 0 ; Query GL50803_23330-t26_1-p1 ; Align 1122336 6 756 utg731_pilon exonerate:protein2genome:local gene 1134072 1134260 276 + . gene_id 0 ; sequence GL50803_23333-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1134072 1134260 . + . utg731_pilon exonerate:protein2genome:local exon 1134072 1134260 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1134072 1134260 276 + . alignment_id 0 ; Query GL50803_23333-t26_1-p1 ; Align 1134072 1 189 utg731_pilon exonerate:protein2genome:local gene 1288026 1288208 146 - . gene_id 0 ; sequence GL50803_23351-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1288026 1288208 . - . utg731_pilon exonerate:protein2genome:local exon 1288026 1288208 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1288026 1288208 146 - . alignment_id 0 ; Query GL50803_23351-t26_1-p1 ; Align 1288209 1 183 utg731_pilon exonerate:protein2genome:local gene 1319472 1320818 2159 + . gene_id 0 ; sequence GL50803_23357-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1319472 1320818 . + . utg731_pilon exonerate:protein2genome:local exon 1319472 1320818 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1319472 1320818 2159 + . alignment_id 0 ; Query GL50803_23357-t26_1-p1 ; Align 1319472 1 1347 utg18_pilon exonerate:protein2genome:local gene 269821 270141 478 - . gene_id 0 ; sequence GL50803_23369-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 269821 270141 . - . utg18_pilon exonerate:protein2genome:local exon 269821 270141 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 269821 270141 478 - . alignment_id 0 ; Query GL50803_23369-t26_1-p1 ; Align 270142 1 321 utg47_pilon exonerate:protein2genome:local gene 403885 404526 1026 - . gene_id 0 ; sequence GL50803_2338-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 403885 404526 . - . utg47_pilon exonerate:protein2genome:local exon 403885 404526 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 403885 404526 1026 - . alignment_id 0 ; Query GL50803_2338-t26_1-p1 ; Align 404527 1 642 utg265_pilon exonerate:protein2genome:local gene 608830 612131 4642 + . gene_id 0 ; sequence GL50803_23389-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 608830 612131 . + . utg265_pilon exonerate:protein2genome:local exon 608830 612131 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 608830 612131 4642 + . alignment_id 0 ; Query GL50803_23389-t26_1-p1 ; Align 608830 1 753 ; Align 609585 253 1431 ; Align 611016 731 1116 utg64_pilon exonerate:protein2genome:local gene 617678 618058 368 + . gene_id 0 ; sequence GL50803_2340-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 617678 618058 . + . utg64_pilon exonerate:protein2genome:local exon 617678 618058 . + . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 617678 618058 368 + . alignment_id 0 ; Query GL50803_2340-t26_1-p1 ; Align 617678 1 204 ; Align 617882 70 99 ; Align 617981 104 78 utg64_pilon exonerate:protein2genome:local gene 618180 618545 442 + . gene_id 0 ; sequence GL50803_2341-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 618180 618545 . + . utg64_pilon exonerate:protein2genome:local exon 618180 618545 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 618180 618545 442 + . alignment_id 0 ; Query GL50803_2341-t26_1-p1 ; Align 618180 1 366 utg64_pilon exonerate:protein2genome:local gene 489336 618903 213 - . gene_id 0 ; sequence GL50803_2342-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 618645 618903 . - . utg64_pilon exonerate:protein2genome:local exon 618645 618903 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 618643 618644 . - . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 489377 618644 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 489377 489378 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 489336 489376 . - . utg64_pilon exonerate:protein2genome:local exon 489336 489376 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 489336 618903 213 - . alignment_id 0 ; Query GL50803_2342-t26_1-p1 ; Align 618904 1 258 ; Align 489375 88 39 utg64_pilon exonerate:protein2genome:local gene 977516 978520 1342 - . gene_id 0 ; sequence GL50803_23420-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 977516 978520 . - . utg64_pilon exonerate:protein2genome:local exon 977516 978520 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 977516 978520 1342 - . alignment_id 0 ; Query GL50803_23420-t26_1-p1 ; Align 978521 1 1005 utg64_pilon exonerate:protein2genome:local gene 975087 975248 137 + . gene_id 0 ; sequence GL50803_23421-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 975087 975248 . + . utg64_pilon exonerate:protein2genome:local exon 975087 975248 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 975087 975248 137 + . alignment_id 0 ; Query GL50803_23421-t26_1-p1 ; Align 975087 7 162 utg64_pilon exonerate:protein2genome:local gene 973298 973642 471 - . gene_id 0 ; sequence GL50803_23424-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 973298 973642 . - . utg64_pilon exonerate:protein2genome:local exon 973298 973642 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 973298 973642 471 - . alignment_id 0 ; Query GL50803_23424-t26_1-p1 ; Align 973643 1 345 utg64_pilon exonerate:protein2genome:local gene 932364 932645 227 + . gene_id 0 ; sequence GL50803_23430-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 932364 932645 . + . utg64_pilon exonerate:protein2genome:local exon 932364 932645 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 932364 932645 227 + . alignment_id 0 ; Query GL50803_23430-t26_1-p1 ; Align 932364 2 282 utg64_pilon exonerate:protein2genome:local gene 905924 906175 472 - . gene_id 0 ; sequence GL50803_23439-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 905924 906175 . - . utg64_pilon exonerate:protein2genome:local exon 905924 906175 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 905924 906175 472 - . alignment_id 0 ; Query GL50803_23439-t26_1-p1 ; Align 906176 1 252 utg64_pilon exonerate:protein2genome:local gene 862670 867589 7256 - . gene_id 0 ; sequence GL50803_23447-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 862670 867589 . - . utg64_pilon exonerate:protein2genome:local exon 862670 867589 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 862670 867589 7256 - . alignment_id 0 ; Query GL50803_23447-t26_1-p1 ; Align 867590 1 4920 utg47_pilon exonerate:protein2genome:local gene 2296500 2296787 345 + . gene_id 0 ; sequence GL50803_2348-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2296500 2296787 . + . utg47_pilon exonerate:protein2genome:local exon 2296500 2296787 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2296500 2296787 345 + . alignment_id 0 ; Query GL50803_2348-t26_1-p1 ; Align 2296500 1 288 utg265_pilon exonerate:protein2genome:local gene 1069171 1071398 3420 - . gene_id 0 ; sequence GL50803_23492-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1069171 1071398 . - . utg265_pilon exonerate:protein2genome:local exon 1069171 1071398 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 1069171 1071398 3420 - . alignment_id 0 ; Query GL50803_23492-t26_1-p1 ; Align 1071399 2 60 ; Align 1071337 22 2166 utg265_pilon exonerate:protein2genome:local gene 1053147 1059578 9253 - . gene_id 0 ; sequence GL50803_23496-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1053147 1059578 . - . utg265_pilon exonerate:protein2genome:local exon 1053147 1059578 . - . insertions 24 ; deletions 6 utg265_pilon exonerate:protein2genome:local similarity 1053147 1059578 9253 - . alignment_id 0 ; Query GL50803_23496-t26_1-p1 ; Align 1059579 1 720 ; Align 1058859 242 204 ; Align 1058655 313 3804 ; Align 1054851 1583 786 ; Align 1054056 1845 30 ; Align 1054017 1855 33 ; Align 1053978 1866 831 utg265_pilon exonerate:protein2genome:local gene 1043364 1043507 231 + . gene_id 0 ; sequence GL50803_23497-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1043364 1043507 . + . utg265_pilon exonerate:protein2genome:local exon 1043364 1043507 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1043364 1043507 231 + . alignment_id 0 ; Query GL50803_23497-t26_1-p1 ; Align 1043364 1 144 utg47_pilon exonerate:protein2genome:local gene 2297475 2298428 1434 - . gene_id 0 ; sequence GL50803_2351-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2297475 2298428 . - . utg47_pilon exonerate:protein2genome:local exon 2297475 2298428 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2297475 2298428 1434 - . alignment_id 0 ; Query GL50803_2351-t26_1-p1 ; Align 2298429 1 954 utg265_pilon exonerate:protein2genome:local gene 952117 952464 323 + . gene_id 0 ; sequence GL50803_23513-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 952117 952464 . + . utg265_pilon exonerate:protein2genome:local exon 952117 952464 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 952117 952464 323 + . alignment_id 0 ; Query GL50803_23513-t26_1-p1 ; Align 952117 4 348 utg265_pilon exonerate:protein2genome:local gene 946238 946390 128 + . gene_id 0 ; sequence GL50803_23515-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 946238 946390 . + . utg265_pilon exonerate:protein2genome:local exon 946238 946390 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 946238 946390 128 + . alignment_id 0 ; Query GL50803_23515-t26_1-p1 ; Align 946238 4 153 utg47_pilon exonerate:protein2genome:local gene 2298544 2298909 396 + . gene_id 0 ; sequence GL50803_2352-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2298544 2298909 . + . utg47_pilon exonerate:protein2genome:local exon 2298544 2298909 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2298544 2298909 396 + . alignment_id 0 ; Query GL50803_2352-t26_1-p1 ; Align 2298544 1 366 utg731_pilon exonerate:protein2genome:local gene 292483 292836 515 - . gene_id 0 ; sequence GL50803_23552-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 292483 292836 . - . utg731_pilon exonerate:protein2genome:local exon 292483 292836 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 292483 292836 515 - . alignment_id 0 ; Query GL50803_23552-t26_1-p1 ; Align 292837 1 354 utg731_pilon exonerate:protein2genome:local gene 311612 316108 5469 - . gene_id 0 ; sequence GL50803_23556-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 311612 316108 . - . utg731_pilon exonerate:protein2genome:local exon 311612 316108 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 311612 316108 5469 - . alignment_id 0 ; Query GL50803_23556-t26_1-p1 ; Align 316109 1 4497 utg731_pilon exonerate:protein2genome:local gene 304176 306603 2350 - . gene_id 0 ; sequence GL50803_23560-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 304176 306603 . - . utg731_pilon exonerate:protein2genome:local exon 304176 306603 . - . insertions 9 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 304176 306603 2350 - . alignment_id 0 ; Query GL50803_23560-t26_1-p1 ; Align 306604 1 1401 ; Align 305202 468 129 ; Align 305070 511 369 ; Align 304695 634 519 utg11_pilon exonerate:protein2genome:local gene 841332 843403 2707 + . gene_id 0 ; sequence GL50803_23597-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 841332 843403 . + . utg11_pilon exonerate:protein2genome:local exon 841332 843403 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 841332 843403 2707 + . alignment_id 0 ; Query GL50803_23597-t26_1-p1 ; Align 841332 13 345 ; Align 841679 128 3 ; Align 841682 130 1722 utg11_pilon exonerate:protein2genome:local gene 824158 825891 2563 + . gene_id 0 ; sequence GL50803_23602-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 824158 825891 . + . utg11_pilon exonerate:protein2genome:local exon 824158 825891 . + . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 824158 825891 2563 + . alignment_id 0 ; Query GL50803_23602-t26_1-p1 ; Align 824158 1 792 ; Align 824950 266 216 ; Align 825169 338 723 utg308_pilon exonerate:protein2genome:local gene 943081 944550 1959 + . gene_id 0 ; sequence GL50803_2362-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 943081 944550 . + . utg308_pilon exonerate:protein2genome:local exon 943081 944550 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 943081 944550 1959 + . alignment_id 0 ; Query GL50803_2362-t26_1-p1 ; Align 943081 1 1470 utg265_pilon exonerate:protein2genome:local gene 892412 893488 1363 + . gene_id 0 ; sequence GL50803_23630-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 892412 893488 . + . utg265_pilon exonerate:protein2genome:local exon 892412 893488 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 892412 893488 1363 + . alignment_id 0 ; Query GL50803_23630-t26_1-p1 ; Align 892412 1 1077 utg265_pilon exonerate:protein2genome:local gene 903140 909184 8667 - . gene_id 0 ; sequence GL50803_23634-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 903140 909184 . - . utg265_pilon exonerate:protein2genome:local exon 903140 909184 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 903140 909184 8667 - . alignment_id 0 ; Query GL50803_23634-t26_1-p1 ; Align 909185 1 6045 utg99_pilon exonerate:protein2genome:local gene 140354 140473 167 + . gene_id 0 ; sequence GL50803_23651-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 140354 140473 . + . utg99_pilon exonerate:protein2genome:local exon 140354 140473 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 140354 140473 167 + . alignment_id 0 ; Query GL50803_23651-t26_1-p1 ; Align 140354 1 120 utg99_pilon exonerate:protein2genome:local gene 150933 153164 2704 - . gene_id 0 ; sequence GL50803_23655-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 150933 153164 . - . utg99_pilon exonerate:protein2genome:local exon 150933 153164 . - . insertions 3 ; deletions 3 utg99_pilon exonerate:protein2genome:local similarity 150933 153164 2704 - . alignment_id 0 ; Query GL50803_23655-t26_1-p1 ; Align 153165 1 30 ; Align 153135 12 405 ; Align 152727 147 1233 ; Align 151494 560 561 utg47_pilon exonerate:protein2genome:local gene 732381 733637 2044 + . gene_id 0 ; sequence GL50803_2366-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 732381 733637 . + . utg47_pilon exonerate:protein2genome:local exon 732381 733637 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 732381 733637 2044 + . alignment_id 0 ; Query GL50803_2366-t26_1-p1 ; Align 732381 1 1257 utg265_pilon exonerate:protein2genome:local gene 388399 389670 1444 - . gene_id 0 ; sequence GL50803_23694-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 388399 389670 . - . utg265_pilon exonerate:protein2genome:local exon 388399 389670 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 388399 389670 1444 - . alignment_id 0 ; Query GL50803_23694-t26_1-p1 ; Align 389671 1 486 ; Align 389185 164 786 utg265_pilon exonerate:protein2genome:local gene 406879 407005 129 + . gene_id 0 ; sequence GL50803_23697-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 406879 407005 . + . utg265_pilon exonerate:protein2genome:local exon 406879 407005 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 406879 407005 129 + . alignment_id 0 ; Query GL50803_23697-t26_1-p1 ; Align 406879 9 69 ; Align 406949 32 57 utg265_pilon exonerate:protein2genome:local gene 408968 410064 1352 - . gene_id 0 ; sequence GL50803_23699-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 408968 410064 . - . utg265_pilon exonerate:protein2genome:local exon 408968 410064 . - . insertions 3 ; deletions 2 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 408968 410064 1352 - . alignment_id 0 ; Query GL50803_23699-t26_1-p1 ; Align 410065 1 189 ; Align 409874 65 282 ; Align 409589 159 285 ; Align 409304 255 336 utg731_pilon exonerate:protein2genome:local gene 1245678 1245845 181 + . gene_id 0 ; sequence GL50803_23735-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1245678 1245845 . + . utg731_pilon exonerate:protein2genome:local exon 1245678 1245845 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1245678 1245845 181 + . alignment_id 0 ; Query GL50803_23735-t26_1-p1 ; Align 1245678 3 168 utg731_pilon exonerate:protein2genome:local gene 1266176 1266307 130 - . gene_id 0 ; sequence GL50803_23739-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1266176 1266307 . - . utg731_pilon exonerate:protein2genome:local exon 1266176 1266307 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1266176 1266307 130 - . alignment_id 0 ; Query GL50803_23739-t26_1-p1 ; Align 1266308 2 132 utg47_pilon exonerate:protein2genome:local gene 636670 636972 346 + . gene_id 0 ; sequence GL50803_23744-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 636670 636972 . + . utg47_pilon exonerate:protein2genome:local exon 636670 636972 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 636670 636972 346 + . alignment_id 0 ; Query GL50803_23744-t26_1-p1 ; Align 636670 2 216 ; Align 636889 74 84 utg11_pilon exonerate:protein2genome:local gene 119958 121223 1753 + . gene_id 0 ; sequence GL50803_23756-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 119958 121223 . + . utg11_pilon exonerate:protein2genome:local exon 119958 121223 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 119958 121223 1753 + . alignment_id 0 ; Query GL50803_23756-t26_1-p1 ; Align 119958 1 1266 utg11_pilon exonerate:protein2genome:local gene 95195 95377 189 - . gene_id 0 ; sequence GL50803_23760-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 95195 95377 . - . utg11_pilon exonerate:protein2genome:local exon 95195 95377 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 95195 95377 189 - . alignment_id 0 ; Query GL50803_23760-t26_1-p1 ; Align 95378 6 183 utg64_pilon exonerate:protein2genome:local gene 490984 492411 2021 + . gene_id 0 ; sequence GL50803_23767-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 490984 492411 . + . utg64_pilon exonerate:protein2genome:local exon 490984 492411 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 490984 492411 2021 + . alignment_id 0 ; Query GL50803_23767-t26_1-p1 ; Align 490984 18 1395 ; Align 492379 484 33 utg349_pilon exonerate:protein2genome:local gene 1265081 1266349 1889 - . gene_id 0 ; sequence GL50803_23800-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1265081 1266349 . - . utg349_pilon exonerate:protein2genome:local exon 1265081 1266349 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1265081 1266349 1889 - . alignment_id 0 ; Query GL50803_23800-t26_1-p1 ; Align 1266350 16 1269 utg47_pilon exonerate:protein2genome:local gene 1561595 1562059 655 - . gene_id 0 ; sequence GL50803_23808-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1561595 1562059 . - . utg47_pilon exonerate:protein2genome:local exon 1561595 1562059 . - . insertions 9 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1561595 1562059 655 - . alignment_id 0 ; Query GL50803_23808-t26_1-p1 ; Align 1562060 47 33 ; Align 1562018 58 423 utg308_pilon exonerate:protein2genome:local gene 359344 359808 655 - . gene_id 0 ; sequence GL50803_23808-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 359344 359808 . - . utg308_pilon exonerate:protein2genome:local exon 359344 359808 . - . insertions 9 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 359344 359808 655 - . alignment_id 0 ; Query GL50803_23808-t26_1-p1 ; Align 359809 47 33 ; Align 359767 58 423 utg47_pilon exonerate:protein2genome:local gene 1577542 1577655 120 + . gene_id 0 ; sequence GL50803_23810-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1577542 1577655 . + . utg47_pilon exonerate:protein2genome:local exon 1577542 1577655 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1577542 1577655 120 + . alignment_id 0 ; Query GL50803_23810-t26_1-p1 ; Align 1577542 1 114 utg47_pilon exonerate:protein2genome:local gene 1584517 1584732 190 + . gene_id 0 ; sequence GL50803_23811-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1584517 1584732 . + . utg47_pilon exonerate:protein2genome:local exon 1584517 1584732 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1584517 1584732 190 + . alignment_id 0 ; Query GL50803_23811-t26_1-p1 ; Align 1584517 1 216 utg47_pilon exonerate:protein2genome:local gene 1638340 1638507 196 - . gene_id 0 ; sequence GL50803_23818-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1638340 1638507 . - . utg47_pilon exonerate:protein2genome:local exon 1638340 1638507 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1638340 1638507 196 - . alignment_id 0 ; Query GL50803_23818-t26_1-p1 ; Align 1638508 1 168 utg47_pilon exonerate:protein2genome:local gene 1172746 1175619 3255 + . gene_id 0 ; sequence GL50803_2382-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1172746 1175619 . + . utg47_pilon exonerate:protein2genome:local exon 1172746 1175619 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1172746 1175619 3255 + . alignment_id 0 ; Query GL50803_2382-t26_1-p1 ; Align 1172746 1 2061 ; Align 1174810 688 810 utg47_pilon exonerate:protein2genome:local gene 1304688 1306982 3804 + . gene_id 0 ; sequence GL50803_23833-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1304688 1306982 . + . utg47_pilon exonerate:protein2genome:local exon 1304688 1306982 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1304688 1306982 3804 + . alignment_id 0 ; Query GL50803_23833-t26_1-p1 ; Align 1304688 1 2295 utg11_pilon exonerate:protein2genome:local gene 198166 198363 161 - . gene_id 0 ; sequence GL50803_23858-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 198166 198363 . - . utg11_pilon exonerate:protein2genome:local exon 198166 198363 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 198166 198363 161 - . alignment_id 0 ; Query GL50803_23858-t26_1-p1 ; Align 198364 1 198 utg11_pilon exonerate:protein2genome:local gene 197576 197689 132 - . gene_id 0 ; sequence GL50803_23859-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 197576 197689 . - . utg11_pilon exonerate:protein2genome:local exon 197576 197689 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 197576 197689 132 - . alignment_id 0 ; Query GL50803_23859-t26_1-p1 ; Align 197690 1 114 utg11_pilon exonerate:protein2genome:local gene 240015 240401 467 + . gene_id 0 ; sequence GL50803_23871-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 240015 240401 . + . utg11_pilon exonerate:protein2genome:local exon 240015 240401 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 240015 240401 467 + . alignment_id 0 ; Query GL50803_23871-t26_1-p1 ; Align 240015 1 387 utg11_pilon exonerate:protein2genome:local gene 227317 227574 206 - . gene_id 0 ; sequence GL50803_23874-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 227317 227574 . - . utg11_pilon exonerate:protein2genome:local exon 227317 227574 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 227317 227574 206 - . alignment_id 0 ; Query GL50803_23874-t26_1-p1 ; Align 227575 1 258 utg11_pilon exonerate:protein2genome:local gene 224813 280692 640 - . gene_id 0 ; sequence GL50803_23876-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 280562 280692 . - . utg11_pilon exonerate:protein2genome:local exon 280562 280692 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 280560 280561 . - . intron_id 1 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 280516 280561 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 280516 280517 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 280088 280515 . - . utg11_pilon exonerate:protein2genome:local exon 280088 280515 . - . insertions 6 ; deletions 1 ; frameshifts 6 utg11_pilon exonerate:protein2genome:local splice5 280086 280087 . - . intron_id 2 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 280058 280087 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 280058 280059 . - . intron_id 1 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local cds 279747 280057 . - . utg11_pilon exonerate:protein2genome:local exon 279747 280057 . - . insertions 18 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 279745 279746 . - . intron_id 3 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 225200 279746 . - . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 225200 225201 . - . intron_id 2 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 225076 225199 . - . utg11_pilon exonerate:protein2genome:local exon 225076 225199 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 225074 225075 . - . intron_id 4 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local intron 224965 225075 . - . intron_id 4 utg11_pilon exonerate:protein2genome:local splice3 224965 224966 . - . intron_id 3 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 224813 224964 . - . utg11_pilon exonerate:protein2genome:local exon 224813 224964 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 224813 280692 640 - . alignment_id 0 ; Query GL50803_23876-t26_1-p1 ; Align 280693 1 129 ; Align 280515 45 114 ; Align 280401 84 12 ; Align 280388 88 123 ; Align 280262 129 66 ; Align 280191 151 51 ; Align 280137 168 48 ; Align 280056 185 33 ; Align 280008 196 132 ; Align 279873 240 126 ; Align 225200 282 123 ; Align 224963 324 150 utg731_pilon exonerate:protein2genome:local gene 414201 416144 2143 - . gene_id 0 ; sequence GL50803_23884-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 415841 416144 . - . utg731_pilon exonerate:protein2genome:local exon 415841 416144 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local splice5 415839 415840 . - . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 415811 415840 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 415811 415812 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 414201 415810 . - . utg731_pilon exonerate:protein2genome:local exon 414201 415810 . - . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 414201 416144 2143 - . alignment_id 0 ; Query GL50803_23884-t26_1-p1 ; Align 416145 182 162 ; Align 415983 237 141 ; Align 415809 285 39 ; Align 415770 300 564 ; Align 415206 489 1005 utg731_pilon exonerate:protein2genome:local gene 398222 398854 974 + . gene_id 0 ; sequence GL50803_23888-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 398222 398854 . + . utg731_pilon exonerate:protein2genome:local exon 398222 398854 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 398222 398854 974 + . alignment_id 0 ; Query GL50803_23888-t26_1-p1 ; Align 398222 1 633 utg64_pilon exonerate:protein2genome:local gene 792930 793076 171 + . gene_id 0 ; sequence GL50803_23894-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 792930 793076 . + . utg64_pilon exonerate:protein2genome:local exon 792930 793076 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 792930 793076 171 + . alignment_id 0 ; Query GL50803_23894-t26_1-p1 ; Align 792930 1 147 utg64_pilon exonerate:protein2genome:local gene 786687 788660 3173 - . gene_id 0 ; sequence GL50803_23897-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 786687 788660 . - . utg64_pilon exonerate:protein2genome:local exon 786687 788660 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 786687 788660 3173 - . alignment_id 0 ; Query GL50803_23897-t26_1-p1 ; Align 788661 1 1974 utg64_pilon exonerate:protein2genome:local gene 775742 775900 134 - . gene_id 0 ; sequence GL50803_23903-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 775742 775900 . - . utg64_pilon exonerate:protein2genome:local exon 775742 775900 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 775742 775900 134 - . alignment_id 0 ; Query GL50803_23903-t26_1-p1 ; Align 775901 2 159 utg47_pilon exonerate:protein2genome:local gene 1807217 1807366 125 - . gene_id 0 ; sequence GL50803_23928-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1807217 1807366 . - . utg47_pilon exonerate:protein2genome:local exon 1807217 1807366 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1807217 1807366 125 - . alignment_id 0 ; Query GL50803_23928-t26_1-p1 ; Align 1807367 3 150 utg47_pilon exonerate:protein2genome:local gene 1809213 1810403 1595 + . gene_id 0 ; sequence GL50803_23930-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1809213 1810403 . + . utg47_pilon exonerate:protein2genome:local exon 1809213 1810403 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1809213 1810403 1595 + . alignment_id 0 ; Query GL50803_23930-t26_1-p1 ; Align 1809213 1 1191 utg47_pilon exonerate:protein2genome:local gene 1826136 1826243 171 + . gene_id 0 ; sequence GL50803_23937-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1826136 1826243 . + . utg47_pilon exonerate:protein2genome:local exon 1826136 1826243 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1826136 1826243 171 + . alignment_id 0 ; Query GL50803_23937-t26_1-p1 ; Align 1826136 1 108 utg99_pilon exonerate:protein2genome:local gene 466878 467015 158 + . gene_id 0 ; sequence GL50803_23954-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 466878 467015 . + . utg99_pilon exonerate:protein2genome:local exon 466878 467015 . + . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 466878 467015 158 + . alignment_id 0 ; Query GL50803_23954-t26_1-p1 ; Align 466878 1 93 ; Align 466971 33 45 utg731_pilon exonerate:protein2genome:local gene 1398436 1398651 153 - . gene_id 0 ; sequence GL50803_23972-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1398436 1398651 . - . utg731_pilon exonerate:protein2genome:local exon 1398436 1398651 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1398436 1398651 153 - . alignment_id 0 ; Query GL50803_23972-t26_1-p1 ; Align 1398652 1 216 utg349_pilon exonerate:protein2genome:local gene 707740 708333 878 - . gene_id 0 ; sequence GL50803_2400-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 707740 708333 . - . utg349_pilon exonerate:protein2genome:local exon 707740 708333 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 707740 708333 878 - . alignment_id 0 ; Query GL50803_2400-t26_1-p1 ; Align 708334 1 594 utg731_pilon exonerate:protein2genome:local gene 1466804 1466908 158 + . gene_id 0 ; sequence GL50803_24005-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1466804 1466908 . + . utg731_pilon exonerate:protein2genome:local exon 1466804 1466908 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1466804 1466908 158 + . alignment_id 0 ; Query GL50803_24005-t26_1-p1 ; Align 1466804 1 105 utg731_pilon exonerate:protein2genome:local gene 1455684 1456988 2089 + . gene_id 0 ; sequence GL50803_24009-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1455684 1456988 . + . utg731_pilon exonerate:protein2genome:local exon 1455684 1456988 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1455684 1456988 2089 + . alignment_id 0 ; Query GL50803_24009-t26_1-p1 ; Align 1455684 1 1305 utg349_pilon exonerate:protein2genome:local gene 708425 709456 1307 + . gene_id 0 ; sequence GL50803_2401-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 708425 709456 . + . utg349_pilon exonerate:protein2genome:local exon 708425 709456 . + . insertions 3 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 708425 709456 1307 + . alignment_id 0 ; Query GL50803_2401-t26_1-p1 ; Align 708425 1 243 ; Align 708671 82 75 ; Align 708746 108 711 utg349_pilon exonerate:protein2genome:local gene 709319 709462 135 - . gene_id 0 ; sequence GL50803_2402-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 709319 709462 . - . utg349_pilon exonerate:protein2genome:local exon 709319 709462 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 709319 709462 135 - . alignment_id 0 ; Query GL50803_2402-t26_1-p1 ; Align 709463 5 144 utg308_pilon exonerate:protein2genome:local gene 791413 791556 123 + . gene_id 0 ; sequence GL50803_24037-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 791413 791556 . + . utg308_pilon exonerate:protein2genome:local exon 791413 791556 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 791413 791556 123 + . alignment_id 0 ; Query GL50803_24037-t26_1-p1 ; Align 791413 1 144 utg308_pilon exonerate:protein2genome:local gene 785045 785174 118 + . gene_id 0 ; sequence GL50803_24039-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 785045 785174 . + . utg308_pilon exonerate:protein2genome:local exon 785045 785174 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 785045 785174 118 + . alignment_id 0 ; Query GL50803_24039-t26_1-p1 ; Align 785045 1 66 ; Align 785112 23 63 utg349_pilon exonerate:protein2genome:local gene 710107 710598 663 - . gene_id 0 ; sequence GL50803_2404-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 710107 710598 . - . utg349_pilon exonerate:protein2genome:local exon 710107 710598 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 710107 710598 663 - . alignment_id 0 ; Query GL50803_2404-t26_1-p1 ; Align 710599 1 492 utg308_pilon exonerate:protein2genome:local gene 772670 775957 4845 + . gene_id 0 ; sequence GL50803_24043-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 772670 775957 . + . utg308_pilon exonerate:protein2genome:local exon 772670 775957 . + . insertions 3 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 772670 775957 4845 + . alignment_id 0 ; Query GL50803_24043-t26_1-p1 ; Align 772670 1 705 ; Align 773378 236 1311 ; Align 774689 674 1269 utg349_pilon exonerate:protein2genome:local gene 1467760 1468017 354 - . gene_id 0 ; sequence GL50803_24062-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1467760 1468017 . - . utg349_pilon exonerate:protein2genome:local exon 1467760 1468017 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1467760 1468017 354 - . alignment_id 0 ; Query GL50803_24062-t26_1-p1 ; Align 1468018 1 258 utg349_pilon exonerate:protein2genome:local gene 1487990 1488565 987 - . gene_id 0 ; sequence GL50803_24068-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1487990 1488565 . - . utg349_pilon exonerate:protein2genome:local exon 1487990 1488565 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1487990 1488565 987 - . alignment_id 0 ; Query GL50803_24068-t26_1-p1 ; Align 1488566 1 576 utg308_pilon exonerate:protein2genome:local gene 428465 429760 1791 - . gene_id 0 ; sequence GL50803_24097-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 428465 429760 . - . utg308_pilon exonerate:protein2genome:local exon 428465 429760 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 428465 429760 1791 - . alignment_id 0 ; Query GL50803_24097-t26_1-p1 ; Align 429761 1 1296 utg308_pilon exonerate:protein2genome:local gene 430017 430217 230 - . gene_id 0 ; sequence GL50803_24098-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 430017 430217 . - . utg308_pilon exonerate:protein2genome:local exon 430017 430217 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 430017 430217 230 - . alignment_id 0 ; Query GL50803_24098-t26_1-p1 ; Align 430218 6 201 utg308_pilon exonerate:protein2genome:local gene 154052 155847 2781 - . gene_id 0 ; sequence GL50803_24111-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 154052 155847 . - . utg308_pilon exonerate:protein2genome:local exon 154052 155847 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 154052 155847 2781 - . alignment_id 0 ; Query GL50803_24111-t26_1-p1 ; Align 155848 1 141 ; Align 155706 48 150 ; Align 155555 98 1503 utg308_pilon exonerate:protein2genome:local gene 156720 160181 4812 - . gene_id 0 ; sequence GL50803_24113-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 156720 160181 . - . utg308_pilon exonerate:protein2genome:local exon 156720 160181 . - . insertions 0 ; deletions 5 utg308_pilon exonerate:protein2genome:local similarity 156720 160181 4812 - . alignment_id 0 ; Query GL50803_24113-t26_1-p1 ; Align 160182 1 1347 ; Align 158835 451 459 ; Align 158376 606 900 ; Align 157476 908 756 utg308_pilon exonerate:protein2genome:local gene 202546 204414 2976 - . gene_id 0 ; sequence GL50803_24122-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 202546 204414 . - . utg308_pilon exonerate:protein2genome:local exon 202546 204414 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 202546 204414 2976 - . alignment_id 0 ; Query GL50803_24122-t26_1-p1 ; Align 204415 1 1869 utg308_pilon exonerate:protein2genome:local gene 212199 212915 1061 + . gene_id 0 ; sequence GL50803_24123-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 212199 212915 . + . utg308_pilon exonerate:protein2genome:local exon 212199 212915 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 212199 212915 1061 + . alignment_id 0 ; Query GL50803_24123-t26_1-p1 ; Align 212199 1 717 utg308_pilon exonerate:protein2genome:local gene 213326 215704 3100 + . gene_id 0 ; sequence GL50803_24126-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 213326 215704 . + . utg308_pilon exonerate:protein2genome:local exon 213326 215704 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 213326 215704 3100 + . alignment_id 0 ; Query GL50803_24126-t26_1-p1 ; Align 213326 1 2379 utg308_pilon exonerate:protein2genome:local gene 286334 289033 4213 - . gene_id 0 ; sequence GL50803_24133-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 286334 289033 . - . utg308_pilon exonerate:protein2genome:local exon 286334 289033 . - . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 286334 289033 4213 - . alignment_id 0 ; Query GL50803_24133-t26_1-p1 ; Align 289034 1 396 ; Align 288638 135 2304 utg308_pilon exonerate:protein2genome:local gene 375294 723724 1695 + . gene_id 0 ; sequence GL50803_24139-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 375294 377025 . + . utg308_pilon exonerate:protein2genome:local exon 375294 377025 . + . insertions 0 ; deletions 5 utg308_pilon exonerate:protein2genome:local splice5 377026 377027 . + . intron_id 1 ; splice_site "CT" utg308_pilon exonerate:protein2genome:local intron 377026 490452 . + . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 490451 490452 . + . intron_id 0 ; splice_site "AC" utg308_pilon exonerate:protein2genome:local cds 490453 490505 . + . utg308_pilon exonerate:protein2genome:local exon 490453 490505 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 490506 490507 . + . intron_id 2 ; splice_site "GA" utg308_pilon exonerate:protein2genome:local intron 490506 630099 . + . intron_id 2 utg308_pilon exonerate:protein2genome:local splice3 630098 630099 . + . intron_id 1 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 630100 630163 . + . utg308_pilon exonerate:protein2genome:local exon 630100 630163 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 630164 630165 . + . intron_id 3 ; splice_site "GA" utg308_pilon exonerate:protein2genome:local intron 630164 723680 . + . intron_id 3 utg308_pilon exonerate:protein2genome:local splice3 723679 723680 . + . intron_id 2 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 723681 723724 . + . utg308_pilon exonerate:protein2genome:local exon 723681 723724 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 375294 723724 1695 + . alignment_id 0 ; Query GL50803_24139-t26_1-p1 ; Align 375294 47 96 ; Align 375390 81 216 ; Align 375606 156 1419 ; Align 490455 630 51 ; Align 630100 647 63 ; Align 723683 669 42 utg308_pilon exonerate:protein2genome:local gene 381374 382034 519 - . gene_id 0 ; sequence GL50803_24140-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 381374 382034 . - . utg308_pilon exonerate:protein2genome:local exon 381374 382034 . - . insertions 3 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 381374 382034 519 - . alignment_id 0 ; Query GL50803_24140-t26_1-p1 ; Align 382035 2 99 ; Align 381933 35 534 ; Align 381398 213 24 utg308_pilon exonerate:protein2genome:local gene 387123 387416 291 + . gene_id 0 ; sequence GL50803_24144-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 387123 387416 . + . utg308_pilon exonerate:protein2genome:local exon 387123 387416 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 387123 387416 291 + . alignment_id 0 ; Query GL50803_24144-t26_1-p1 ; Align 387123 11 294 utg308_pilon exonerate:protein2genome:local gene 392924 393097 192 + . gene_id 0 ; sequence GL50803_24146-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 392924 393097 . + . utg308_pilon exonerate:protein2genome:local exon 392924 393097 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 392924 393097 192 + . alignment_id 0 ; Query GL50803_24146-t26_1-p1 ; Align 392924 1 174 utg212_pilon exonerate:protein2genome:local gene 491654 492304 917 - . gene_id 0 ; sequence GL50803_2419-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 491654 492304 . - . utg212_pilon exonerate:protein2genome:local exon 491654 492304 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 491654 492304 917 - . alignment_id 0 ; Query GL50803_2419-t26_1-p1 ; Align 492305 1 651 utg47_pilon exonerate:protein2genome:local gene 948107 950442 3134 - . gene_id 0 ; sequence GL50803_24194-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 948107 950442 . - . utg47_pilon exonerate:protein2genome:local exon 948107 950442 . - . insertions 0 ; deletions 5 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 948107 950442 3134 - . alignment_id 0 ; Query GL50803_24194-t26_1-p1 ; Align 950443 1 501 ; Align 949940 169 84 ; Align 949856 200 435 ; Align 949421 346 1314 utg47_pilon exonerate:protein2genome:local gene 938155 938265 126 - . gene_id 0 ; sequence GL50803_24197-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 938155 938265 . - . utg47_pilon exonerate:protein2genome:local exon 938155 938265 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 938155 938265 126 - . alignment_id 0 ; Query GL50803_24197-t26_1-p1 ; Align 938266 1 111 utg212_pilon exonerate:protein2genome:local gene 488086 488817 1073 + . gene_id 0 ; sequence GL50803_2421-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 488086 488817 . + . utg212_pilon exonerate:protein2genome:local exon 488086 488817 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 488086 488817 1073 + . alignment_id 0 ; Query GL50803_2421-t26_1-p1 ; Align 488086 4 732 utg99_pilon exonerate:protein2genome:local gene 277203 277343 110 - . gene_id 0 ; sequence GL50803_24275-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 277203 277343 . - . utg99_pilon exonerate:protein2genome:local exon 277203 277343 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 277203 277343 110 - . alignment_id 0 ; Query GL50803_24275-t26_1-p1 ; Align 277344 1 141 utg99_pilon exonerate:protein2genome:local gene 293399 295768 3212 + . gene_id 0 ; sequence GL50803_24279-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 293399 295768 . + . utg99_pilon exonerate:protein2genome:local exon 293399 295768 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 293399 295768 3212 + . alignment_id 0 ; Query GL50803_24279-t26_1-p1 ; Align 293399 1 2370 utg265_pilon exonerate:protein2genome:local gene 863984 864844 1404 + . gene_id 0 ; sequence GL50803_24321-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 863984 864844 . + . utg265_pilon exonerate:protein2genome:local exon 863984 864844 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 863984 864844 1404 + . alignment_id 0 ; Query GL50803_24321-t26_1-p1 ; Align 863984 1 861 utg265_pilon exonerate:protein2genome:local gene 567238 569075 2136 - . gene_id 0 ; sequence GL50803_24330-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 567238 569075 . - . utg265_pilon exonerate:protein2genome:local exon 567238 569075 . - . insertions 0 ; deletions 3 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 567238 569075 2136 - . alignment_id 0 ; Query GL50803_24330-t26_1-p1 ; Align 569076 1 153 ; Align 568921 53 909 ; Align 568012 357 600 ; Align 567412 558 174 utg47_pilon exonerate:protein2genome:local gene 2290919 2291416 352 - . gene_id 0 ; sequence GL50803_24337-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2290919 2291416 . - . utg47_pilon exonerate:protein2genome:local exon 2290919 2291416 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2290919 2291416 352 - . alignment_id 0 ; Query GL50803_24337-t26_1-p1 ; Align 2291417 1 498 utg349_pilon exonerate:protein2genome:local gene 1596180 1597238 1760 + . gene_id 0 ; sequence GL50803_24372-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1596180 1597238 . + . utg349_pilon exonerate:protein2genome:local exon 1596180 1597238 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1596180 1597238 1760 + . alignment_id 0 ; Query GL50803_24372-t26_1-p1 ; Align 1596180 1 1059 utg349_pilon exonerate:protein2genome:local gene 1607328 1607504 158 + . gene_id 0 ; sequence GL50803_24374-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1607328 1607504 . + . utg349_pilon exonerate:protein2genome:local exon 1607328 1607504 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1607328 1607504 158 + . alignment_id 0 ; Query GL50803_24374-t26_1-p1 ; Align 1607328 1 177 utg349_pilon exonerate:protein2genome:local gene 1623632 1625833 3255 - . gene_id 0 ; sequence GL50803_24376-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1623632 1625833 . - . utg349_pilon exonerate:protein2genome:local exon 1623632 1625833 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1623632 1625833 3255 - . alignment_id 0 ; Query GL50803_24376-t26_1-p1 ; Align 1625834 1 2202 utg47_pilon exonerate:protein2genome:local gene 857365 859062 2062 + . gene_id 0 ; sequence GL50803_24400-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 857365 859062 . + . utg47_pilon exonerate:protein2genome:local exon 857365 859062 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 857365 859062 2062 + . alignment_id 0 ; Query GL50803_24400-t26_1-p1 ; Align 857365 1 1698 utg265_pilon exonerate:protein2genome:local gene 716647 871471 1211 - . gene_id 0 ; sequence GL50803_24412-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 871130 871471 . - . utg265_pilon exonerate:protein2genome:local exon 871130 871471 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 871128 871129 . - . intron_id 1 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 871037 871129 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 871037 871038 . - . intron_id 0 ; splice_site "AC" utg265_pilon exonerate:protein2genome:local cds 870503 871036 . - . utg265_pilon exonerate:protein2genome:local exon 870503 871036 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 870501 870502 . - . intron_id 2 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 861694 870502 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 861694 861695 . - . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 861479 861693 . - . utg265_pilon exonerate:protein2genome:local exon 861479 861693 . - . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 861477 861478 . - . intron_id 3 ; splice_site "GC" utg265_pilon exonerate:protein2genome:local intron 716984 861478 . - . intron_id 3 utg265_pilon exonerate:protein2genome:local splice3 716984 716985 . - . intron_id 2 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local cds 716647 716983 . - . utg265_pilon exonerate:protein2genome:local exon 716647 716983 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 716647 871471 1211 - . alignment_id 0 ; Query GL50803_24412-t26_1-p1 ; Align 871472 34 342 ; Align 871037 148 534 ; Align 861694 326 120 ; Align 861568 366 87 ; Align 716983 396 336 utg47_pilon exonerate:protein2genome:local gene 1715219 1717766 3446 - . gene_id 0 ; sequence GL50803_24423-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1715219 1717766 . - . utg47_pilon exonerate:protein2genome:local exon 1715219 1717766 . - . insertions 0 ; deletions 6 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1715219 1717766 3446 - . alignment_id 0 ; Query GL50803_24423-t26_1-p1 ; Align 1717767 26 27 ; Align 1717739 35 609 ; Align 1717130 241 9 ; Align 1717121 246 1413 ; Align 1715708 718 489 utg47_pilon exonerate:protein2genome:local gene 1710089 1711483 1844 + . gene_id 0 ; sequence GL50803_24425-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1710089 1711483 . + . utg47_pilon exonerate:protein2genome:local exon 1710089 1711483 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1710089 1711483 1844 + . alignment_id 0 ; Query GL50803_24425-t26_1-p1 ; Align 1710089 14 1395 utg349_pilon exonerate:protein2genome:local gene 222258 222413 230 - . gene_id 0 ; sequence GL50803_24446-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 222258 222413 . - . utg349_pilon exonerate:protein2genome:local exon 222258 222413 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 222258 222413 230 - . alignment_id 0 ; Query GL50803_24446-t26_1-p1 ; Align 222414 1 156 utg349_pilon exonerate:protein2genome:local gene 211296 211415 155 - . gene_id 0 ; sequence GL50803_24448-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 211296 211415 . - . utg349_pilon exonerate:protein2genome:local exon 211296 211415 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 211296 211415 155 - . alignment_id 0 ; Query GL50803_24448-t26_1-p1 ; Align 211416 1 120 utg349_pilon exonerate:protein2genome:local gene 206299 206715 739 - . gene_id 0 ; sequence GL50803_24451-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 206299 206715 . - . utg349_pilon exonerate:protein2genome:local exon 206299 206715 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 206299 206715 739 - . alignment_id 0 ; Query GL50803_24451-t26_1-p1 ; Align 206716 1 417 utg349_pilon exonerate:protein2genome:local gene 205436 206120 1052 - . gene_id 0 ; sequence GL50803_24452-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 205436 206120 . - . utg349_pilon exonerate:protein2genome:local exon 205436 206120 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 205436 206120 1052 - . alignment_id 0 ; Query GL50803_24452-t26_1-p1 ; Align 206121 1 111 ; Align 206009 38 573 utg349_pilon exonerate:protein2genome:local gene 204585 205391 1061 - . gene_id 0 ; sequence GL50803_24453-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 204585 205391 . - . utg349_pilon exonerate:protein2genome:local exon 204585 205391 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 204585 205391 1061 - . alignment_id 0 ; Query GL50803_24453-t26_1-p1 ; Align 205392 1 303 ; Align 205089 105 504 utg47_pilon exonerate:protein2genome:local gene 1914768 2019956 122 - . gene_id 0 ; sequence GL50803_24471-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2019785 2019956 . - . utg47_pilon exonerate:protein2genome:local exon 2019785 2019956 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 2019783 2019784 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1914845 2019784 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1914845 1914846 . - . intron_id 0 ; splice_site "TC" utg47_pilon exonerate:protein2genome:local cds 1914768 1914844 . - . utg47_pilon exonerate:protein2genome:local exon 1914768 1914844 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1914768 2019956 122 - . alignment_id 0 ; Query GL50803_24471-t26_1-p1 ; Align 2019957 10 171 ; Align 1914843 68 75 utg99_pilon exonerate:protein2genome:local gene 58239 58388 246 - . gene_id 0 ; sequence GL50803_24477-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 58239 58388 . - . utg99_pilon exonerate:protein2genome:local exon 58239 58388 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 58239 58388 246 - . alignment_id 0 ; Query GL50803_24477-t26_1-p1 ; Align 58389 1 150 utg64_pilon exonerate:protein2genome:local gene 625332 626462 1409 - . gene_id 0 ; sequence GL50803_24485-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 625332 626462 . - . utg64_pilon exonerate:protein2genome:local exon 625332 626462 . - . insertions 0 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 625332 626462 1409 - . alignment_id 0 ; Query GL50803_24485-t26_1-p1 ; Align 626463 1 468 ; Align 625995 159 147 ; Align 625848 209 228 ; Align 625620 286 288 utg64_pilon exonerate:protein2genome:local gene 621384 621950 809 + . gene_id 0 ; sequence GL50803_24488-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 621384 621950 . + . utg64_pilon exonerate:protein2genome:local exon 621384 621950 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 621384 621950 809 + . alignment_id 0 ; Query GL50803_24488-t26_1-p1 ; Align 621384 1 567 utg47_pilon exonerate:protein2genome:local gene 513814 517278 5021 - . gene_id 0 ; sequence GL50803_24505-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 513814 517278 . - . utg47_pilon exonerate:protein2genome:local exon 513814 517278 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 513814 517278 5021 - . alignment_id 0 ; Query GL50803_24505-t26_1-p1 ; Align 517279 1 684 ; Align 516595 230 2781 utg11_pilon exonerate:protein2genome:local gene 1149223 1150020 1127 + . gene_id 0 ; sequence GL50803_24512-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1149223 1150020 . + . utg11_pilon exonerate:protein2genome:local exon 1149223 1150020 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1149223 1150020 1127 + . alignment_id 0 ; Query GL50803_24512-t26_1-p1 ; Align 1149223 1 798 utg11_pilon exonerate:protein2genome:local gene 435505 435648 116 + . gene_id 0 ; sequence GL50803_24515-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 435505 435648 . + . utg11_pilon exonerate:protein2genome:local exon 435505 435648 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 435505 435648 116 + . alignment_id 0 ; Query GL50803_24515-t26_1-p1 ; Align 435505 1 144 utg99_pilon exonerate:protein2genome:local gene 31798 32790 1544 - . gene_id 0 ; sequence GL50803_2452-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 31798 32790 . - . utg99_pilon exonerate:protein2genome:local exon 31798 32790 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 31798 32790 1544 - . alignment_id 0 ; Query GL50803_2452-t26_1-p1 ; Align 32791 1 993 utg11_pilon exonerate:protein2genome:local gene 364179 365387 1671 + . gene_id 0 ; sequence GL50803_24528-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 364179 365387 . + . utg11_pilon exonerate:protein2genome:local exon 364179 365387 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 364179 365387 1671 + . alignment_id 0 ; Query GL50803_24528-t26_1-p1 ; Align 364179 1 1209 utg11_pilon exonerate:protein2genome:local gene 351022 351225 227 + . gene_id 0 ; sequence GL50803_24531-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 351022 351225 . + . utg11_pilon exonerate:protein2genome:local exon 351022 351225 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 351022 351225 227 + . alignment_id 0 ; Query GL50803_24531-t26_1-p1 ; Align 351022 1 204 utg11_pilon exonerate:protein2genome:local gene 288563 290101 2317 + . gene_id 0 ; sequence GL50803_24537-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 288563 290101 . + . utg11_pilon exonerate:protein2genome:local exon 288563 290101 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 288563 290101 2317 + . alignment_id 0 ; Query GL50803_24537-t26_1-p1 ; Align 288563 1 1539 utg47_pilon exonerate:protein2genome:local gene 371609 374922 3656 - . gene_id 0 ; sequence GL50803_24555-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 371609 374922 . - . utg47_pilon exonerate:protein2genome:local exon 371609 374922 . - . insertions 6 ; deletions 0 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 371609 374922 3656 - . alignment_id 0 ; Query GL50803_24555-t26_1-p1 ; Align 374923 1 348 ; Align 374574 117 201 ; Align 374372 184 1095 ; Align 373271 549 1662 utg265_pilon exonerate:protein2genome:local gene 788804 790348 2225 - . gene_id 0 ; sequence GL50803_24584-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 788804 790348 . - . utg265_pilon exonerate:protein2genome:local exon 788804 790348 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 788804 790348 2225 - . alignment_id 0 ; Query GL50803_24584-t26_1-p1 ; Align 790349 1 1545 utg265_pilon exonerate:protein2genome:local gene 802274 802421 144 + . gene_id 0 ; sequence GL50803_24586-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 802274 802421 . + . utg265_pilon exonerate:protein2genome:local exon 802274 802421 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 802274 802421 144 + . alignment_id 0 ; Query GL50803_24586-t26_1-p1 ; Align 802274 1 24 ; Align 802299 9 123 utg47_pilon exonerate:protein2genome:local gene 66810 69719 4208 + . gene_id 0 ; sequence GL50803_24590-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 66810 69719 . + . utg47_pilon exonerate:protein2genome:local exon 66810 69719 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 66810 69719 4208 + . alignment_id 0 ; Query GL50803_24590-t26_1-p1 ; Align 66810 1 2910 utg308_pilon exonerate:protein2genome:local gene 855093 861429 8021 - . gene_id 0 ; sequence GL50803_24603-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 855093 861429 . - . utg308_pilon exonerate:protein2genome:local exon 855093 861429 . - . insertions 6 ; deletions 15 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 855093 861429 8021 - . alignment_id 0 ; Query GL50803_24603-t26_1-p1 ; Align 861430 1 786 ; Align 860644 264 27 ; Align 860617 276 93 ; Align 860521 307 423 ; Align 860098 449 45 ; Align 860053 466 99 ; Align 859954 501 687 ; Align 859267 731 522 ; Align 858745 906 1662 ; Align 857082 1460 147 ; Align 856932 1509 39 ; Align 856893 1526 1800 utg47_pilon exonerate:protein2genome:local gene 662055 663482 1560 - . gene_id 0 ; sequence GL50803_2461-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 662055 663482 . - . utg47_pilon exonerate:protein2genome:local exon 662055 663482 . - . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 662055 663482 1560 - . alignment_id 0 ; Query GL50803_2461-t26_1-p1 ; Align 663483 1 957 ; Align 662520 320 465 utg308_pilon exonerate:protein2genome:local gene 888472 888660 154 + . gene_id 0 ; sequence GL50803_24613-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 888472 888660 . + . utg308_pilon exonerate:protein2genome:local exon 888472 888660 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 888472 888660 154 + . alignment_id 0 ; Query GL50803_24613-t26_1-p1 ; Align 888472 1 189 utg731_pilon exonerate:protein2genome:local gene 609645 610607 1541 + . gene_id 0 ; sequence GL50803_24636-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 609645 610607 . + . utg731_pilon exonerate:protein2genome:local exon 609645 610607 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 609645 610607 1541 + . alignment_id 0 ; Query GL50803_24636-t26_1-p1 ; Align 609645 1 963 utg731_pilon exonerate:protein2genome:local gene 591419 591610 167 - . gene_id 0 ; sequence GL50803_24639-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 591419 591610 . - . utg731_pilon exonerate:protein2genome:local exon 591419 591610 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 591419 591610 167 - . alignment_id 0 ; Query GL50803_24639-t26_1-p1 ; Align 591611 3 192 utg731_pilon exonerate:protein2genome:local gene 550503 550743 180 - . gene_id 0 ; sequence GL50803_24643-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 550503 550743 . - . utg731_pilon exonerate:protein2genome:local exon 550503 550743 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 550503 550743 180 - . alignment_id 0 ; Query GL50803_24643-t26_1-p1 ; Align 550744 1 96 ; Align 550647 33 144 utg349_pilon exonerate:protein2genome:local gene 369571 371139 2544 - . gene_id 0 ; sequence GL50803_24662-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 369571 371139 . - . utg349_pilon exonerate:protein2genome:local exon 369571 371139 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 369571 371139 2544 - . alignment_id 0 ; Query GL50803_24662-t26_1-p1 ; Align 371140 1 1569 utg47_pilon exonerate:protein2genome:local gene 1858309 1858449 124 + . gene_id 0 ; sequence GL50803_24681-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1858309 1858449 . + . utg47_pilon exonerate:protein2genome:local exon 1858309 1858449 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1858309 1858449 124 + . alignment_id 0 ; Query GL50803_24681-t26_1-p1 ; Align 1858309 1 141 utg47_pilon exonerate:protein2genome:local gene 1857522 1857800 359 + . gene_id 0 ; sequence GL50803_24682-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1857522 1857800 . + . utg47_pilon exonerate:protein2genome:local exon 1857522 1857800 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1857522 1857800 359 + . alignment_id 0 ; Query GL50803_24682-t26_1-p1 ; Align 1857522 1 279 utg99_pilon exonerate:protein2genome:local gene 398263 399948 2000 - . gene_id 0 ; sequence GL50803_24695-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 398263 399948 . - . utg99_pilon exonerate:protein2genome:local exon 398263 399948 . - . insertions 15 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 398263 399948 2000 - . alignment_id 0 ; Query GL50803_24695-t26_1-p1 ; Align 399949 1 324 ; Align 399622 109 618 ; Align 399004 316 453 ; Align 398539 467 276 utg349_pilon exonerate:protein2genome:local gene 290229 290357 163 + . gene_id 0 ; sequence GL50803_24711-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 290229 290357 . + . utg349_pilon exonerate:protein2genome:local exon 290229 290357 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 290229 290357 163 + . alignment_id 0 ; Query GL50803_24711-t26_1-p1 ; Align 290229 1 129 utg349_pilon exonerate:protein2genome:local gene 286820 291931 7334 - . gene_id 0 ; sequence GL50803_24712-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 286820 291931 . - . utg349_pilon exonerate:protein2genome:local exon 286820 291931 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 286820 291931 7334 - . alignment_id 0 ; Query GL50803_24712-t26_1-p1 ; Align 291932 69 3621 ; Align 288311 1279 1491 utg731_pilon exonerate:protein2genome:local gene 460119 465686 6335 + . gene_id 0 ; sequence GL50803_24734-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 460119 465182 . + . utg731_pilon exonerate:protein2genome:local exon 460119 465182 . + . insertions 3 ; deletions 9 utg731_pilon exonerate:protein2genome:local splice5 465183 465184 . + . intron_id 1 ; splice_site "GC" utg731_pilon exonerate:protein2genome:local intron 465183 465215 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 465214 465215 . + . intron_id 0 ; splice_site "AA" utg731_pilon exonerate:protein2genome:local cds 465216 465686 . + . utg731_pilon exonerate:protein2genome:local exon 465216 465686 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 460119 465686 6335 + . alignment_id 0 ; Query GL50803_24734-t26_1-p1 ; Align 460119 1 1161 ; Align 461280 390 597 ; Align 461880 589 2385 ; Align 464265 1385 294 ; Align 464559 1484 228 ; Align 464787 1561 171 ; Align 464958 1619 123 ; Align 465081 1662 48 ; Align 465129 1679 54 ; Align 465216 1697 471 utg47_pilon exonerate:protein2genome:local gene 1065456 1066661 1764 - . gene_id 0 ; sequence GL50803_24807-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1065456 1066661 . - . utg47_pilon exonerate:protein2genome:local exon 1065456 1066661 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1065456 1066661 1764 - . alignment_id 0 ; Query GL50803_24807-t26_1-p1 ; Align 1066662 1 1206 utg47_pilon exonerate:protein2genome:local gene 1067911 1068132 227 - . gene_id 0 ; sequence GL50803_24809-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1067911 1068132 . - . utg47_pilon exonerate:protein2genome:local exon 1067911 1068132 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1067911 1068132 227 - . alignment_id 0 ; Query GL50803_24809-t26_1-p1 ; Align 1068133 1 222 utg47_pilon exonerate:protein2genome:local gene 1096017 1103231 9520 - . gene_id 0 ; sequence GL50803_24818-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1096017 1103231 . - . utg47_pilon exonerate:protein2genome:local exon 1096017 1103231 . - . insertions 9 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 1096017 1103231 9520 - . alignment_id 0 ; Query GL50803_24818-t26_1-p1 ; Align 1103232 1 4356 ; Align 1098867 1453 1587 ; Align 1097280 1986 1263 utg64_pilon exonerate:protein2genome:local gene 24469 25995 2270 - . gene_id 0 ; sequence GL50803_2483-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 24469 25995 . - . utg64_pilon exonerate:protein2genome:local exon 24469 25995 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 24469 25995 2270 - . alignment_id 0 ; Query GL50803_2483-t26_1-p1 ; Align 25996 1 1527 utg731_pilon exonerate:protein2genome:local gene 647662 653220 8526 + . gene_id 0 ; sequence GL50803_24842-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 647662 653220 . + . utg731_pilon exonerate:protein2genome:local exon 647662 653220 . + . insertions 6 ; deletions 1 ; frameshifts 3 utg731_pilon exonerate:protein2genome:local similarity 647662 653220 8526 + . alignment_id 0 ; Query GL50803_24842-t26_1-p1 ; Align 647662 1 1545 ; Align 649210 516 405 ; Align 649617 652 1458 ; Align 651076 1138 807 ; Align 651886 1407 1335 utg11_pilon exonerate:protein2genome:local gene 614428 614907 664 - . gene_id 0 ; sequence GL50803_2486-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 614428 614907 . - . utg11_pilon exonerate:protein2genome:local exon 614428 614907 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 614428 614907 664 - . alignment_id 0 ; Query GL50803_2486-t26_1-p1 ; Align 614908 1 480 utg11_pilon exonerate:protein2genome:local gene 1039847 1041310 2378 + . gene_id 0 ; sequence GL50803_24860-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1039847 1041310 . + . utg11_pilon exonerate:protein2genome:local exon 1039847 1041310 . + . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 1039847 1041310 2378 + . alignment_id 0 ; Query GL50803_24860-t26_1-p1 ; Align 1039847 1 954 ; Align 1040801 320 420 ; Align 1041221 462 90 utg11_pilon exonerate:protein2genome:local gene 987085 990966 5274 + . gene_id 0 ; sequence GL50803_24861-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 987085 990966 . + . utg11_pilon exonerate:protein2genome:local exon 987085 990966 . + . insertions 6 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 987085 990966 5274 + . alignment_id 0 ; Query GL50803_24861-t26_1-p1 ; Align 987085 1 369 ; Align 987460 124 621 ; Align 988081 334 1353 ; Align 989434 787 1533 utg731_pilon exonerate:protein2genome:local gene 971249 974068 4636 - . gene_id 0 ; sequence GL50803_24880-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 971249 974068 . - . utg731_pilon exonerate:protein2genome:local exon 971249 974068 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 971249 974068 4636 - . alignment_id 0 ; Query GL50803_24880-t26_1-p1 ; Align 974069 1 2784 ; Align 971285 931 36 utg11_pilon exonerate:protein2genome:local gene 1251777 1251929 185 - . gene_id 0 ; sequence GL50803_24911-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1251777 1251929 . - . utg11_pilon exonerate:protein2genome:local exon 1251777 1251929 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1251777 1251929 185 - . alignment_id 0 ; Query GL50803_24911-t26_1-p1 ; Align 1251930 3 153 utg308_pilon exonerate:protein2genome:local gene 739351 739974 684 - . gene_id 0 ; sequence GL50803_24946-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 739351 739974 . - . utg308_pilon exonerate:protein2genome:local exon 739351 739974 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 739351 739974 684 - . alignment_id 0 ; Query GL50803_24946-t26_1-p1 ; Align 739975 1 624 utg308_pilon exonerate:protein2genome:local gene 739360 739929 792 + . gene_id 0 ; sequence GL50803_24947-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 739360 739929 . + . utg308_pilon exonerate:protein2genome:local exon 739360 739929 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 739360 739929 792 + . alignment_id 0 ; Query GL50803_24947-t26_1-p1 ; Align 739360 1 570 utg731_pilon exonerate:protein2genome:local gene 862759 863793 1388 - . gene_id 0 ; sequence GL50803_24979-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 862759 863793 . - . utg731_pilon exonerate:protein2genome:local exon 862759 863793 . - . insertions 9 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 862759 863793 1388 - . alignment_id 0 ; Query GL50803_24979-t26_1-p1 ; Align 863794 1 180 ; Align 863605 61 681 ; Align 862924 291 36 ; Align 862888 304 129 utg731_pilon exonerate:protein2genome:local gene 863827 865359 1772 + . gene_id 0 ; sequence GL50803_24980-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 863827 865359 . + . utg731_pilon exonerate:protein2genome:local exon 863827 865359 . + . insertions 0 ; deletions 6 utg731_pilon exonerate:protein2genome:local similarity 863827 865359 1772 + . alignment_id 0 ; Query GL50803_24980-t26_1-p1 ; Align 863827 4 426 ; Align 864253 149 384 ; Align 864637 278 261 ; Align 864898 367 462 utg731_pilon exonerate:protein2genome:local gene 883603 885408 2319 + . gene_id 0 ; sequence GL50803_24985-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 883603 885408 . + . utg731_pilon exonerate:protein2genome:local exon 883603 885408 . + . insertions 3 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 883603 885408 2319 + . alignment_id 0 ; Query GL50803_24985-t26_1-p1 ; Align 883603 1 537 ; Align 884143 180 564 ; Align 884707 369 99 ; Align 884806 403 18 ; Align 884824 410 585 utg99_pilon exonerate:protein2genome:local gene 502429 502596 154 + . gene_id 0 ; sequence GL50803_25001-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 502429 502596 . + . utg99_pilon exonerate:protein2genome:local exon 502429 502596 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 502429 502596 154 + . alignment_id 0 ; Query GL50803_25001-t26_1-p1 ; Align 502429 1 168 utg99_pilon exonerate:protein2genome:local gene 533038 533592 718 + . gene_id 0 ; sequence GL50803_25011-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 533038 533592 . + . utg99_pilon exonerate:protein2genome:local exon 533038 533592 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 533038 533592 718 + . alignment_id 0 ; Query GL50803_25011-t26_1-p1 ; Align 533038 6 555 utg99_pilon exonerate:protein2genome:local gene 533769 533948 240 - . gene_id 0 ; sequence GL50803_25013-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 533769 533948 . - . utg99_pilon exonerate:protein2genome:local exon 533769 533948 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 533769 533948 240 - . alignment_id 0 ; Query GL50803_25013-t26_1-p1 ; Align 533949 1 180 utg349_pilon exonerate:protein2genome:local gene 1059718 1060131 520 + . gene_id 0 ; sequence GL50803_25032-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1059718 1060131 . + . utg349_pilon exonerate:protein2genome:local exon 1059718 1060131 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1059718 1060131 520 + . alignment_id 0 ; Query GL50803_25032-t26_1-p1 ; Align 1059718 1 414 utg349_pilon exonerate:protein2genome:local gene 1201241 1203061 2953 - . gene_id 0 ; sequence GL50803_25035-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1201241 1203061 . - . utg349_pilon exonerate:protein2genome:local exon 1201241 1203061 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1201241 1203061 2953 - . alignment_id 0 ; Query GL50803_25035-t26_1-p1 ; Align 1203062 1 1821 utg11_pilon exonerate:protein2genome:local gene 1395590 1395835 220 + . gene_id 0 ; sequence GL50803_25051-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1395590 1395835 . + . utg11_pilon exonerate:protein2genome:local exon 1395590 1395835 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1395590 1395835 220 + . alignment_id 0 ; Query GL50803_25051-t26_1-p1 ; Align 1395590 1 246 utg1966_pilon exonerate:protein2genome:local gene 62461 63393 1254 + . gene_id 0 ; sequence GL50803_25071-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 62461 63393 . + . utg1966_pilon exonerate:protein2genome:local exon 62461 63393 . + . insertions 0 ; deletions 6 utg1966_pilon exonerate:protein2genome:local similarity 62461 63393 1254 + . alignment_id 0 ; Query GL50803_25071-t26_1-p1 ; Align 62461 26 267 ; Align 62728 117 18 ; Align 62746 124 108 ; Align 62854 163 540 utg1966_pilon exonerate:protein2genome:local gene 69885 70637 760 + . gene_id 0 ; sequence GL50803_25075-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 69885 70637 . + . utg1966_pilon exonerate:protein2genome:local exon 69885 70637 . + . insertions 9 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 69885 70637 760 + . alignment_id 0 ; Query GL50803_25075-t26_1-p1 ; Align 69885 526 315 ; Align 70209 631 429 utg47_pilon exonerate:protein2genome:local gene 1397343 1398263 1210 + . gene_id 0 ; sequence GL50803_2508-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1397343 1398263 . + . utg47_pilon exonerate:protein2genome:local exon 1397343 1398263 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1397343 1398263 1210 + . alignment_id 0 ; Query GL50803_2508-t26_1-p1 ; Align 1397343 1 921 utg1966_pilon exonerate:protein2genome:local gene 154164 154550 306 + . gene_id 0 ; sequence GL50803_25080-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 154164 154550 . + . utg1966_pilon exonerate:protein2genome:local exon 154164 154550 . + . insertions 12 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 154164 154550 306 + . alignment_id 0 ; Query GL50803_25080-t26_1-p1 ; Align 154164 12 330 ; Align 154506 122 45 utg47_pilon exonerate:protein2genome:local gene 1396822 1397262 632 - . gene_id 0 ; sequence GL50803_2509-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1396822 1397262 . - . utg47_pilon exonerate:protein2genome:local exon 1396822 1397262 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1396822 1397262 632 - . alignment_id 0 ; Query GL50803_2509-t26_1-p1 ; Align 1397263 1 441 utg212_pilon exonerate:protein2genome:local gene 40191 43916 5033 + . gene_id 0 ; sequence GL50803_25205-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 40191 43916 . + . utg212_pilon exonerate:protein2genome:local exon 40191 43916 . + . insertions 15 ; deletions 9 utg212_pilon exonerate:protein2genome:local similarity 40191 43916 5033 + . alignment_id 0 ; Query GL50803_25205-t26_1-p1 ; Align 40191 1 285 ; Align 40476 100 1902 ; Align 42393 734 729 ; Align 43122 982 795 utg11_pilon exonerate:protein2genome:local gene 759615 761878 3505 + . gene_id 0 ; sequence GL50803_2523-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 759615 761878 . + . utg11_pilon exonerate:protein2genome:local exon 759615 761878 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 759615 761878 3505 + . alignment_id 0 ; Query GL50803_2523-t26_1-p1 ; Align 759615 1 1038 ; Align 760654 347 285 ; Align 760940 442 939 utg212_pilon exonerate:protein2genome:local gene 434509 435825 1903 - . gene_id 0 ; sequence GL50803_25235-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 434509 435825 . - . utg212_pilon exonerate:protein2genome:local exon 434509 435825 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 434509 435825 1903 - . alignment_id 0 ; Query GL50803_25235-t26_1-p1 ; Align 435826 1 1317 utg212_pilon exonerate:protein2genome:local gene 429348 431405 2873 - . gene_id 0 ; sequence GL50803_25238-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 429348 431405 . - . utg212_pilon exonerate:protein2genome:local exon 429348 431405 . - . insertions 6 ; deletions 2 ; frameshifts 3 utg212_pilon exonerate:protein2genome:local similarity 429348 431405 2873 - . alignment_id 0 ; Query GL50803_25238-t26_1-p1 ; Align 431406 1 819 ; Align 430586 274 33 ; Align 430547 285 204 ; Align 430343 354 231 ; Align 430110 432 762 utg212_pilon exonerate:protein2genome:local gene 324209 325191 1308 + . gene_id 0 ; sequence GL50803_2527-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 324209 325191 . + . utg212_pilon exonerate:protein2genome:local exon 324209 325191 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 324209 325191 1308 + . alignment_id 0 ; Query GL50803_2527-t26_1-p1 ; Align 324209 1 681 ; Align 324892 229 300 utg349_pilon exonerate:protein2genome:local gene 1343852 1348075 5459 - . gene_id 0 ; sequence GL50803_25296-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1343852 1348075 . - . utg349_pilon exonerate:protein2genome:local exon 1343852 1348075 . - . insertions 0 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 1343852 1348075 5459 - . alignment_id 0 ; Query GL50803_25296-t26_1-p1 ; Align 1348076 1 45 ; Align 1348031 20 1260 ; Align 1346771 441 2919 utg11_pilon exonerate:protein2genome:local gene 1426333 1426569 191 - . gene_id 0 ; sequence GL50803_2536-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1426333 1426569 . - . utg11_pilon exonerate:protein2genome:local exon 1426333 1426569 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1426333 1426569 191 - . alignment_id 0 ; Query GL50803_2536-t26_1-p1 ; Align 1426570 4 237 utg11_pilon exonerate:protein2genome:local gene 1424126 1426147 2947 + . gene_id 0 ; sequence GL50803_2538-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1424126 1426147 . + . utg11_pilon exonerate:protein2genome:local exon 1424126 1426147 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1424126 1426147 2947 + . alignment_id 0 ; Query GL50803_2538-t26_1-p1 ; Align 1424126 1 780 ; Align 1424906 262 1242 utg47_pilon exonerate:protein2genome:local gene 2238990 2239118 169 - . gene_id 0 ; sequence GL50803_25406-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2238990 2239118 . - . utg47_pilon exonerate:protein2genome:local exon 2238990 2239118 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2238990 2239118 169 - . alignment_id 0 ; Query GL50803_25406-t26_1-p1 ; Align 2239119 1 129 utg212_pilon exonerate:protein2genome:local gene 69406 70903 1868 - . gene_id 0 ; sequence GL50803_2548-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 69406 70903 . - . utg212_pilon exonerate:protein2genome:local exon 69406 70903 . - . insertions 6 ; deletions 2 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 69406 70903 1868 - . alignment_id 0 ; Query GL50803_2548-t26_1-p1 ; Align 70904 1 345 ; Align 70553 116 354 ; Align 70198 234 567 ; Align 69631 424 81 ; Align 69550 452 144 utg212_pilon exonerate:protein2genome:local gene 68647 69380 924 + . gene_id 0 ; sequence GL50803_2549-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 68647 69380 . + . utg212_pilon exonerate:protein2genome:local exon 68647 69380 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 68647 69380 924 + . alignment_id 0 ; Query GL50803_2549-t26_1-p1 ; Align 68647 1 417 ; Align 69066 141 315 utg212_pilon exonerate:protein2genome:local gene 342556 342666 169 - . gene_id 0 ; sequence GL50803_25496-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 342556 342666 . - . utg212_pilon exonerate:protein2genome:local exon 342556 342666 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 342556 342666 169 - . alignment_id 0 ; Query GL50803_25496-t26_1-p1 ; Align 342667 1 111 utg47_pilon exonerate:protein2genome:local gene 178968 179162 145 - . gene_id 0 ; sequence GL50803_25506-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 178968 179162 . - . utg47_pilon exonerate:protein2genome:local exon 178968 179162 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 178968 179162 145 - . alignment_id 0 ; Query GL50803_25506-t26_1-p1 ; Align 179163 21 195 utg11_pilon exonerate:protein2genome:local gene 1030858 1031433 730 - . gene_id 0 ; sequence GL50803_2555-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1030858 1031433 . - . utg11_pilon exonerate:protein2genome:local exon 1030858 1031433 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1030858 1031433 730 - . alignment_id 0 ; Query GL50803_2555-t26_1-p1 ; Align 1031434 1 576 utg11_pilon exonerate:protein2genome:local gene 1031460 1031726 340 + . gene_id 0 ; sequence GL50803_2556-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1031460 1031726 . + . utg11_pilon exonerate:protein2genome:local exon 1031460 1031726 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1031460 1031726 340 + . alignment_id 0 ; Query GL50803_2556-t26_1-p1 ; Align 1031460 1 267 utg47_pilon exonerate:protein2genome:local gene 1528406 1528633 184 + . gene_id 0 ; sequence GL50803_25618-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1528406 1528633 . + . utg47_pilon exonerate:protein2genome:local exon 1528406 1528633 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1528406 1528633 184 + . alignment_id 0 ; Query GL50803_25618-t26_1-p1 ; Align 1528406 1 228 utg308_pilon exonerate:protein2genome:local gene 316756 319842 4075 - . gene_id 0 ; sequence GL50803_2562-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 316756 319842 . - . utg308_pilon exonerate:protein2genome:local exon 316756 319842 . - . insertions 15 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 316756 319842 4075 - . alignment_id 0 ; Query GL50803_2562-t26_1-p1 ; Align 319843 1 2421 ; Align 317407 808 651 utg47_pilon exonerate:protein2genome:local gene 1667028 1667171 178 - . gene_id 0 ; sequence GL50803_25661-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1667028 1667171 . - . utg47_pilon exonerate:protein2genome:local exon 1667028 1667171 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1667028 1667171 178 - . alignment_id 0 ; Query GL50803_25661-t26_1-p1 ; Align 1667172 7 144 utg265_pilon exonerate:protein2genome:local gene 753334 753621 381 - . gene_id 0 ; sequence GL50803_25713-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 753334 753621 . - . utg265_pilon exonerate:protein2genome:local exon 753334 753621 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 753334 753621 381 - . alignment_id 0 ; Query GL50803_25713-t26_1-p1 ; Align 753622 1 288 utg265_pilon exonerate:protein2genome:local gene 536995 537546 719 - . gene_id 0 ; sequence GL50803_25715-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 536995 537546 . - . utg265_pilon exonerate:protein2genome:local exon 536995 537546 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 536995 537546 719 - . alignment_id 0 ; Query GL50803_25715-t26_1-p1 ; Align 537547 1 552 utg99_pilon exonerate:protein2genome:local gene 141274 142548 1184 + . gene_id 0 ; sequence GL50803_2572-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 141274 142548 . + . utg99_pilon exonerate:protein2genome:local exon 141274 142548 . + . insertions 3 ; deletions 8 utg99_pilon exonerate:protein2genome:local similarity 141274 142548 1184 + . alignment_id 0 ; Query GL50803_2572-t26_1-p1 ; Align 141274 1 57 ; Align 141334 20 78 ; Align 141412 50 381 ; Align 141793 178 240 ; Align 142033 259 228 ; Align 142261 337 288 utg47_pilon exonerate:protein2genome:local gene 604530 605237 820 + . gene_id 0 ; sequence GL50803_25809-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 604530 605237 . + . utg47_pilon exonerate:protein2genome:local exon 604530 605237 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 604530 605237 820 + . alignment_id 0 ; Query GL50803_25809-t26_1-p1 ; Align 604530 1 708 utg265_pilon exonerate:protein2genome:local gene 62170 62508 329 + . gene_id 0 ; sequence GL50803_25815-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 62170 62508 . + . utg265_pilon exonerate:protein2genome:local exon 62170 62508 . + . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 62170 62508 329 + . alignment_id 0 ; Query GL50803_25815-t26_1-p1 ; Align 62170 1 318 ; Align 62491 107 18 utg265_pilon exonerate:protein2genome:local gene 62154 64961 3782 - . gene_id 0 ; sequence GL50803_25816-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 62154 64961 . - . utg265_pilon exonerate:protein2genome:local exon 62154 64961 . - . insertions 18 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 62154 64961 3782 - . alignment_id 0 ; Query GL50803_25816-t26_1-p1 ; Align 64962 6 255 ; Align 64695 91 846 ; Align 63846 373 1020 ; Align 62826 714 123 ; Align 62703 756 213 ; Align 62487 827 333 utg308_pilon exonerate:protein2genome:local gene 776048 776224 277 - . gene_id 0 ; sequence GL50803_25855-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 776048 776224 . - . utg308_pilon exonerate:protein2genome:local exon 776048 776224 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 776048 776224 277 - . alignment_id 0 ; Query GL50803_25855-t26_1-p1 ; Align 776225 1 177 utg308_pilon exonerate:protein2genome:local gene 837150 837447 239 + . gene_id 0 ; sequence GL50803_25892-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 837150 837447 . + . utg308_pilon exonerate:protein2genome:local exon 837150 837447 . + . insertions 0 ; deletions 0 ; frameshifts 7 utg308_pilon exonerate:protein2genome:local similarity 837150 837447 239 + . alignment_id 0 ; Query GL50803_25892-t26_1-p1 ; Align 837150 1 162 ; Align 837314 55 48 ; Align 837367 71 81 utg308_pilon exonerate:protein2genome:local gene 811817 812114 239 - . gene_id 0 ; sequence GL50803_25892-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 811817 812114 . - . utg308_pilon exonerate:protein2genome:local exon 811817 812114 . - . insertions 6 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 811817 812114 239 - . alignment_id 0 ; Query GL50803_25892-t26_1-p1 ; Align 812115 1 159 ; Align 811955 54 42 ; Align 811907 68 90 utg47_pilon exonerate:protein2genome:local gene 664994 665218 311 + . gene_id 0 ; sequence GL50803_25894-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 664994 665218 . + . utg47_pilon exonerate:protein2genome:local exon 664994 665218 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 664994 665218 311 + . alignment_id 0 ; Query GL50803_25894-t26_1-p1 ; Align 664994 1 225 utg265_pilon exonerate:protein2genome:local gene 669480 669826 222 + . gene_id 0 ; sequence GL50803_25913-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 669480 669826 . + . utg265_pilon exonerate:protein2genome:local exon 669480 669826 . + . insertions 0 ; deletions 4 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 669480 669826 222 + . alignment_id 0 ; Query GL50803_25913-t26_1-p1 ; Align 669480 14 81 ; Align 669563 41 168 ; Align 669731 101 96 utg11_pilon exonerate:protein2genome:local gene 603428 603547 136 - . gene_id 0 ; sequence GL50803_25929-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 603428 603547 . - . utg11_pilon exonerate:protein2genome:local exon 603428 603547 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 603428 603547 136 - . alignment_id 0 ; Query GL50803_25929-t26_1-p1 ; Align 603548 1 120 utg99_pilon exonerate:protein2genome:local gene 348559 348744 266 + . gene_id 0 ; sequence GL50803_25951-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 348559 348744 . + . utg99_pilon exonerate:protein2genome:local exon 348559 348744 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 348559 348744 266 + . alignment_id 0 ; Query GL50803_25951-t26_1-p1 ; Align 348559 1 186 utg11_pilon exonerate:protein2genome:local gene 48918 49164 289 + . gene_id 0 ; sequence GL50803_2597-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 48918 49164 . + . utg11_pilon exonerate:protein2genome:local exon 48918 49164 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 48918 49164 289 + . alignment_id 0 ; Query GL50803_2597-t26_1-p1 ; Align 48918 1 39 ; Align 48958 14 3 ; Align 48961 16 204 utg349_pilon exonerate:protein2genome:local gene 206500 206646 166 + . gene_id 0 ; sequence GL50803_26017-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 206500 206646 . + . utg349_pilon exonerate:protein2genome:local exon 206500 206646 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 206500 206646 166 + . alignment_id 0 ; Query GL50803_26017-t26_1-p1 ; Align 206500 1 147 utg11_pilon exonerate:protein2genome:local gene 523405 524580 1737 + . gene_id 0 ; sequence GL50803_2605-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 523405 524580 . + . utg11_pilon exonerate:protein2genome:local exon 523405 524580 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 523405 524580 1737 + . alignment_id 0 ; Query GL50803_2605-t26_1-p1 ; Align 523405 8 1176 utg11_pilon exonerate:protein2genome:local gene 1261001 1261114 146 + . gene_id 0 ; sequence GL50803_26063-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1261001 1261114 . + . utg11_pilon exonerate:protein2genome:local exon 1261001 1261114 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1261001 1261114 146 + . alignment_id 0 ; Query GL50803_26063-t26_1-p1 ; Align 1261001 1 114 utg99_pilon exonerate:protein2genome:local gene 200810 201073 340 - . gene_id 0 ; sequence GL50803_26121-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 200810 201073 . - . utg99_pilon exonerate:protein2genome:local exon 200810 201073 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 200810 201073 340 - . alignment_id 0 ; Query GL50803_26121-t26_1-p1 ; Align 201074 2 264 utg212_pilon exonerate:protein2genome:local gene 615145 615291 230 + . gene_id 0 ; sequence GL50803_26129-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 615145 615291 . + . utg212_pilon exonerate:protein2genome:local exon 615145 615291 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 615145 615291 230 + . alignment_id 0 ; Query GL50803_26129-t26_1-p1 ; Align 615145 1 147 utg212_pilon exonerate:protein2genome:local gene 502597 502743 230 - . gene_id 0 ; sequence GL50803_26129-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 502597 502743 . - . utg212_pilon exonerate:protein2genome:local exon 502597 502743 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 502597 502743 230 - . alignment_id 0 ; Query GL50803_26129-t26_1-p1 ; Align 502744 1 147 utg308_pilon exonerate:protein2genome:local gene 185006 185293 163 - . gene_id 0 ; sequence GL50803_26140-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 185006 185293 . - . utg308_pilon exonerate:protein2genome:local exon 185006 185293 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 185006 185293 163 - . alignment_id 0 ; Query GL50803_26140-t26_1-p1 ; Align 185294 3 93 ; Align 185198 34 192 utg265_pilon exonerate:protein2genome:local gene 66920 67234 490 - . gene_id 0 ; sequence GL50803_2616-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 66920 67234 . - . utg265_pilon exonerate:protein2genome:local exon 66920 67234 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 66920 67234 490 - . alignment_id 0 ; Query GL50803_2616-t26_1-p1 ; Align 67235 1 315 utg731_pilon exonerate:protein2genome:local gene 517894 518139 335 + . gene_id 0 ; sequence GL50803_26173-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 517894 518139 . + . utg731_pilon exonerate:protein2genome:local exon 517894 518139 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 517894 518139 335 + . alignment_id 0 ; Query GL50803_26173-t26_1-p1 ; Align 517894 1 246 utg47_pilon exonerate:protein2genome:local gene 135258 136709 1963 - . gene_id 0 ; sequence GL50803_26199-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 135258 136709 . - . utg47_pilon exonerate:protein2genome:local exon 135258 136709 . - . insertions 3 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 135258 136709 1963 - . alignment_id 0 ; Query GL50803_26199-t26_1-p1 ; Align 136710 1 984 ; Align 135723 329 411 ; Align 135312 467 54 utg64_pilon exonerate:protein2genome:local gene 455615 456232 577 + . gene_id 0 ; sequence GL50803_26207-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 455615 456232 . + . utg64_pilon exonerate:protein2genome:local exon 455615 456232 . + . insertions 9 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 455615 456232 577 + . alignment_id 0 ; Query GL50803_26207-t26_1-p1 ; Align 455615 1 390 ; Align 456014 131 219 utg11_pilon exonerate:protein2genome:local gene 79952 80797 1512 + . gene_id 0 ; sequence GL50803_2622-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 79952 80797 . + . utg11_pilon exonerate:protein2genome:local exon 79952 80797 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 79952 80797 1512 + . alignment_id 0 ; Query GL50803_2622-t26_1-p1 ; Align 79952 1 846 utg11_pilon exonerate:protein2genome:local gene 79789 79980 101 - . gene_id 0 ; sequence GL50803_2623-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 79789 79980 . - . utg11_pilon exonerate:protein2genome:local exon 79789 79980 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 79789 79980 101 - . alignment_id 0 ; Query GL50803_2623-t26_1-p1 ; Align 79981 1 192 utg212_pilon exonerate:protein2genome:local gene 311960 312472 542 - . gene_id 0 ; sequence GL50803_26287-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 311960 312472 . - . utg212_pilon exonerate:protein2genome:local exon 311960 312472 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 311960 312472 542 - . alignment_id 0 ; Query GL50803_26287-t26_1-p1 ; Align 312473 1 513 utg308_pilon exonerate:protein2genome:local gene 944661 945020 259 - . gene_id 0 ; sequence GL50803_26308-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 944661 945020 . - . utg308_pilon exonerate:protein2genome:local exon 944661 945020 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 944661 945020 259 - . alignment_id 0 ; Query GL50803_26308-t26_1-p1 ; Align 945021 2 360 utg1966_pilon exonerate:protein2genome:local gene 63799 64323 434 + . gene_id 0 ; sequence GL50803_2631-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 63799 64323 . + . utg1966_pilon exonerate:protein2genome:local exon 63799 64323 . + . insertions 12 ; deletions 5 utg1966_pilon exonerate:protein2genome:local similarity 63799 64323 434 + . alignment_id 0 ; Query GL50803_2631-t26_1-p1 ; Align 63799 6 66 ; Align 63865 29 252 ; Align 64117 115 33 ; Align 64150 128 111 ; Align 64273 165 51 utg265_pilon exonerate:protein2genome:local gene 310299 310984 534 + . gene_id 0 ; sequence GL50803_2632-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 310299 310984 . + . utg265_pilon exonerate:protein2genome:local exon 310299 310984 . + . insertions 3 ; deletions 1 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 310299 310984 534 + . alignment_id 0 ; Query GL50803_2632-t26_1-p1 ; Align 310299 62 222 ; Align 310524 136 87 ; Align 310613 165 6 ; Align 310619 168 366 utg265_pilon exonerate:protein2genome:local gene 310639 311025 550 - . gene_id 0 ; sequence GL50803_2633-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 310639 311025 . - . utg265_pilon exonerate:protein2genome:local exon 310639 311025 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 310639 311025 550 - . alignment_id 0 ; Query GL50803_2633-t26_1-p1 ; Align 311026 1 387 utg64_pilon exonerate:protein2genome:local gene 22568 24442 2338 + . gene_id 0 ; sequence GL50803_26364-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 22568 24442 . + . utg64_pilon exonerate:protein2genome:local exon 22568 24442 . + . insertions 12 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 22568 24442 2338 + . alignment_id 0 ; Query GL50803_26364-t26_1-p1 ; Align 22568 1 1197 ; Align 23768 400 585 ; Align 24362 595 81 utg212_pilon exonerate:protein2genome:local gene 323743 324180 585 - . gene_id 0 ; sequence GL50803_26379-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 323743 324180 . - . utg212_pilon exonerate:protein2genome:local exon 323743 324180 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 323743 324180 585 - . alignment_id 0 ; Query GL50803_26379-t26_1-p1 ; Align 324181 1 438 utg11_pilon exonerate:protein2genome:local gene 521191 521316 102 - . gene_id 0 ; sequence GL50803_26412-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 521191 521316 . - . utg11_pilon exonerate:protein2genome:local exon 521191 521316 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 521191 521316 102 - . alignment_id 0 ; Query GL50803_26412-t26_1-p1 ; Align 521317 1 102 ; Align 521212 35 21 utg349_pilon exonerate:protein2genome:local gene 803820 804473 724 + . gene_id 0 ; sequence GL50803_26435-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 803820 804473 . + . utg349_pilon exonerate:protein2genome:local exon 803820 804473 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 803820 804473 724 + . alignment_id 0 ; Query GL50803_26435-t26_1-p1 ; Align 803820 2 123 ; Align 803943 44 378 ; Align 804321 171 153 utg11_pilon exonerate:protein2genome:local gene 845105 845335 180 - . gene_id 0 ; sequence GL50803_26439-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 845105 845335 . - . utg11_pilon exonerate:protein2genome:local exon 845105 845335 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 845105 845335 180 - . alignment_id 0 ; Query GL50803_26439-t26_1-p1 ; Align 845336 1 231 utg265_pilon exonerate:protein2genome:local gene 291739 291879 188 - . gene_id 0 ; sequence GL50803_26442-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 291739 291879 . - . utg265_pilon exonerate:protein2genome:local exon 291739 291879 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 291739 291879 188 - . alignment_id 0 ; Query GL50803_26442-t26_1-p1 ; Align 291880 1 141 utg1966_pilon exonerate:protein2genome:local gene 83429 83569 188 + . gene_id 0 ; sequence GL50803_26442-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 83429 83569 . + . utg1966_pilon exonerate:protein2genome:local exon 83429 83569 . + . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 83429 83569 188 + . alignment_id 0 ; Query GL50803_26442-t26_1-p1 ; Align 83429 1 141 utg1966_pilon exonerate:protein2genome:local gene 144221 144361 188 - . gene_id 0 ; sequence GL50803_26442-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 144221 144361 . - . utg1966_pilon exonerate:protein2genome:local exon 144221 144361 . - . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 144221 144361 188 - . alignment_id 0 ; Query GL50803_26442-t26_1-p1 ; Align 144362 1 141 utg349_pilon exonerate:protein2genome:local gene 401803 401958 166 - . gene_id 0 ; sequence GL50803_26455-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 401803 401958 . - . utg349_pilon exonerate:protein2genome:local exon 401803 401958 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 401803 401958 166 - . alignment_id 0 ; Query GL50803_26455-t26_1-p1 ; Align 401959 1 156 utg11_pilon exonerate:protein2genome:local gene 749389 749787 500 + . gene_id 0 ; sequence GL50803_26507-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 749389 749787 . + . utg11_pilon exonerate:protein2genome:local exon 749389 749787 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 749389 749787 500 + . alignment_id 0 ; Query GL50803_26507-t26_1-p1 ; Align 749389 1 399 utg349_pilon exonerate:protein2genome:local gene 1487430 1487624 134 - . gene_id 0 ; sequence GL50803_26533-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1487430 1487624 . - . utg349_pilon exonerate:protein2genome:local exon 1487430 1487624 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1487430 1487624 134 - . alignment_id 0 ; Query GL50803_26533-t26_1-p1 ; Align 1487625 2 195 utg212_pilon exonerate:protein2genome:local gene 292609 292833 332 - . gene_id 0 ; sequence GL50803_26553-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 292609 292833 . - . utg212_pilon exonerate:protein2genome:local exon 292609 292833 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 292609 292833 332 - . alignment_id 0 ; Query GL50803_26553-t26_1-p1 ; Align 292834 1 225 utg731_pilon exonerate:protein2genome:local gene 1321305 1322291 1033 - . gene_id 0 ; sequence GL50803_26589-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1321305 1322291 . - . utg731_pilon exonerate:protein2genome:local exon 1321305 1322291 . - . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1321305 1322291 1033 - . alignment_id 0 ; Query GL50803_26589-t26_1-p1 ; Align 1322292 19 210 ; Align 1322076 89 771 utg212_pilon exonerate:protein2genome:local gene 14045 115880 613 + . gene_id 0 ; sequence GL50803_26590-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14045 14426 . + . utg212_pilon exonerate:protein2genome:local exon 14045 14426 . + . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local splice5 14427 14428 . + . intron_id 1 ; splice_site "AC" utg212_pilon exonerate:protein2genome:local intron 14427 115722 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115721 115722 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115723 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115723 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14045 115880 613 + . alignment_id 0 ; Query GL50803_26590-t26_1-p1 ; Align 14045 1 63 ; Align 14108 23 318 ; Align 115725 130 156 utg64_pilon exonerate:protein2genome:local gene 103873 104355 420 - . gene_id 0 ; sequence GL50803_26603-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 103873 104355 . - . utg64_pilon exonerate:protein2genome:local exon 103873 104355 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 103873 104355 420 - . alignment_id 0 ; Query GL50803_26603-t26_1-p1 ; Align 104356 19 483 utg47_pilon exonerate:protein2genome:local gene 2229450 2229704 484 - . gene_id 0 ; sequence GL50803_2661-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2229450 2229704 . - . utg47_pilon exonerate:protein2genome:local exon 2229450 2229704 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2229450 2229704 484 - . alignment_id 0 ; Query GL50803_2661-t26_1-p1 ; Align 2229705 1 255 utg64_pilon exonerate:protein2genome:local gene 28744 28983 296 + . gene_id 0 ; sequence GL50803_26679-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 28744 28983 . + . utg64_pilon exonerate:protein2genome:local exon 28744 28983 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 28744 28983 296 + . alignment_id 0 ; Query GL50803_26679-t26_1-p1 ; Align 28744 11 240 utg308_pilon exonerate:protein2genome:local gene 659070 659861 1019 - . gene_id 0 ; sequence GL50803_26739-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 659070 659861 . - . utg308_pilon exonerate:protein2genome:local exon 659070 659861 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 659070 659861 1019 - . alignment_id 0 ; Query GL50803_26739-t26_1-p1 ; Align 659862 1 792 utg18_pilon exonerate:protein2genome:local gene 222499 222642 196 + . gene_id 0 ; sequence GL50803_26741-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 222499 222642 . + . utg18_pilon exonerate:protein2genome:local exon 222499 222642 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 222499 222642 196 + . alignment_id 0 ; Query GL50803_26741-t26_1-p1 ; Align 222499 1 144 utg47_pilon exonerate:protein2genome:local gene 1765169 1765744 942 - . gene_id 0 ; sequence GL50803_26749-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1765169 1765744 . - . utg47_pilon exonerate:protein2genome:local exon 1765169 1765744 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1765169 1765744 942 - . alignment_id 0 ; Query GL50803_26749-t26_1-p1 ; Align 1765745 1 576 utg731_pilon exonerate:protein2genome:local gene 285724 285837 139 + . gene_id 0 ; sequence GL50803_26775-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 285724 285837 . + . utg731_pilon exonerate:protein2genome:local exon 285724 285837 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 285724 285837 139 + . alignment_id 0 ; Query GL50803_26775-t26_1-p1 ; Align 285724 2 114 utg47_pilon exonerate:protein2genome:local gene 389419 389613 316 + . gene_id 0 ; sequence GL50803_26800-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 389419 389613 . + . utg47_pilon exonerate:protein2genome:local exon 389419 389613 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 389419 389613 316 + . alignment_id 0 ; Query GL50803_26800-t26_1-p1 ; Align 389419 1 195 utg47_pilon exonerate:protein2genome:local gene 446098 446292 316 + . gene_id 0 ; sequence GL50803_26800-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 446098 446292 . + . utg47_pilon exonerate:protein2genome:local exon 446098 446292 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 446098 446292 316 + . alignment_id 0 ; Query GL50803_26800-t26_1-p1 ; Align 446098 1 195 utg11_pilon exonerate:protein2genome:local gene 877068 877523 547 + . gene_id 0 ; sequence GL50803_26835-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 877068 877523 . + . utg11_pilon exonerate:protein2genome:local exon 877068 877523 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 877068 877523 547 + . alignment_id 0 ; Query GL50803_26835-t26_1-p1 ; Align 877068 1 456 utg99_pilon exonerate:protein2genome:local gene 138016 138582 630 - . gene_id 0 ; sequence GL50803_26838-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 138016 138582 . - . utg99_pilon exonerate:protein2genome:local exon 138016 138582 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 138016 138582 630 - . alignment_id 0 ; Query GL50803_26838-t26_1-p1 ; Align 138583 1 567 utg11_pilon exonerate:protein2genome:local gene 509539 509988 428 - . gene_id 0 ; sequence GL50803_26840-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 509539 509988 . - . utg11_pilon exonerate:protein2genome:local exon 509539 509988 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 509539 509988 428 - . alignment_id 0 ; Query GL50803_26840-t26_1-p1 ; Align 509989 1 450 utg11_pilon exonerate:protein2genome:local gene 1737837 1737974 136 + . gene_id 0 ; sequence GL50803_26855-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1737837 1737974 . + . utg11_pilon exonerate:protein2genome:local exon 1737837 1737974 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1737837 1737974 136 + . alignment_id 0 ; Query GL50803_26855-t26_1-p1 ; Align 1737837 1 138 utg731_pilon exonerate:protein2genome:local gene 1343326 1343682 394 + . gene_id 0 ; sequence GL50803_26894-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1343326 1343682 . + . utg731_pilon exonerate:protein2genome:local exon 1343326 1343682 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1343326 1343682 394 + . alignment_id 0 ; Query GL50803_26894-t26_1-p1 ; Align 1343326 24 357 utg11_pilon exonerate:protein2genome:local gene 1166498 1166665 156 + . gene_id 0 ; sequence GL50803_26900-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1166498 1166665 . + . utg11_pilon exonerate:protein2genome:local exon 1166498 1166665 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1166498 1166665 156 + . alignment_id 0 ; Query GL50803_26900-t26_1-p1 ; Align 1166498 1 168 utg349_pilon exonerate:protein2genome:local gene 583951 584415 498 - . gene_id 0 ; sequence GL50803_26915-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 584111 584415 . - . utg349_pilon exonerate:protein2genome:local exon 584111 584415 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 584109 584110 . - . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 584075 584110 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 584075 584076 . - . intron_id 0 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 583951 584074 . - . utg349_pilon exonerate:protein2genome:local exon 583951 584074 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 583951 584415 498 - . alignment_id 0 ; Query GL50803_26915-t26_1-p1 ; Align 584416 1 303 ; Align 584074 103 123 utg99_pilon exonerate:protein2genome:local gene 443360 444019 903 + . gene_id 0 ; sequence GL50803_26917-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 443360 444019 . + . utg99_pilon exonerate:protein2genome:local exon 443360 444019 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 443360 444019 903 + . alignment_id 0 ; Query GL50803_26917-t26_1-p1 ; Align 443360 1 660 utg308_pilon exonerate:protein2genome:local gene 809811 810968 1603 - . gene_id 0 ; sequence GL50803_2692-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 809811 810968 . - . utg308_pilon exonerate:protein2genome:local exon 809811 810968 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 809811 810968 1603 - . alignment_id 0 ; Query GL50803_2692-t26_1-p1 ; Align 810969 1 1158 utg64_pilon exonerate:protein2genome:local gene 964708 965058 412 - . gene_id 0 ; sequence GL50803_26925-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 964708 965058 . - . utg64_pilon exonerate:protein2genome:local exon 964708 965058 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 964708 965058 412 - . alignment_id 0 ; Query GL50803_26925-t26_1-p1 ; Align 965059 5 351 utg212_pilon exonerate:protein2genome:local gene 533194 533898 996 + . gene_id 0 ; sequence GL50803_26955-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 533194 533898 . + . utg212_pilon exonerate:protein2genome:local exon 533194 533898 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 533194 533898 996 + . alignment_id 0 ; Query GL50803_26955-t26_1-p1 ; Align 533194 65 705 utg47_pilon exonerate:protein2genome:local gene 1629626 1787315 526 + . gene_id 0 ; sequence GL50803_26981-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1629626 1629984 . + . utg47_pilon exonerate:protein2genome:local exon 1629626 1629984 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 1629985 1629986 . + . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1629985 1787182 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1787181 1787182 . + . intron_id 0 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local cds 1787183 1787315 . + . utg47_pilon exonerate:protein2genome:local exon 1787183 1787315 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1629626 1787315 526 + . alignment_id 0 ; Query GL50803_26981-t26_1-p1 ; Align 1629626 5 339 ; Align 1629965 119 18 ; Align 1787184 126 132 utg11_pilon exonerate:protein2genome:local gene 294804 295127 425 + . gene_id 0 ; sequence GL50803_26988-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 294804 295127 . + . utg11_pilon exonerate:protein2genome:local exon 294804 295127 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 294804 295127 425 + . alignment_id 0 ; Query GL50803_26988-t26_1-p1 ; Align 294804 1 324 utg349_pilon exonerate:protein2genome:local gene 860091 860537 632 - . gene_id 0 ; sequence GL50803_27024-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 860091 860537 . - . utg349_pilon exonerate:protein2genome:local exon 860091 860537 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 860091 860537 632 - . alignment_id 0 ; Query GL50803_27024-t26_1-p1 ; Align 860538 1 447 utg64_pilon exonerate:protein2genome:local gene 437282 597550 1824 - . gene_id 0 ; sequence GL50803_27027-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 596275 597550 . - . utg64_pilon exonerate:protein2genome:local exon 596275 597550 . - . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local splice5 596273 596274 . - . intron_id 1 ; splice_site "CT" utg64_pilon exonerate:protein2genome:local intron 517969 596274 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 517969 517970 . - . intron_id 0 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local cds 517913 517968 . - . utg64_pilon exonerate:protein2genome:local exon 517913 517968 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 517911 517912 . - . intron_id 2 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 437417 517912 . - . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 437417 437418 . - . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 437282 437416 . - . utg64_pilon exonerate:protein2genome:local exon 437282 437416 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 437282 597550 1824 - . alignment_id 0 ; Query GL50803_27027-t26_1-p1 ; Align 597551 1 627 ; Align 596924 212 648 ; Align 517967 429 33 ; Align 517931 440 18 ; Align 437417 446 135 utg64_pilon exonerate:protein2genome:local gene 598716 598907 301 + . gene_id 0 ; sequence GL50803_27028-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 598716 598907 . + . utg64_pilon exonerate:protein2genome:local exon 598716 598907 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 598716 598907 301 + . alignment_id 0 ; Query GL50803_27028-t26_1-p1 ; Align 598716 1 192 utg47_pilon exonerate:protein2genome:local gene 64615 64872 348 + . gene_id 0 ; sequence GL50803_27035-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 64615 64872 . + . utg47_pilon exonerate:protein2genome:local exon 64615 64872 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 64615 64872 348 + . alignment_id 0 ; Query GL50803_27035-t26_1-p1 ; Align 64615 1 258 utg308_pilon exonerate:protein2genome:local gene 878553 878987 630 + . gene_id 0 ; sequence GL50803_27055-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 878553 878987 . + . utg308_pilon exonerate:protein2genome:local exon 878553 878987 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 878553 878987 630 + . alignment_id 0 ; Query GL50803_27055-t26_1-p1 ; Align 878553 1 435 utg308_pilon exonerate:protein2genome:local gene 880210 880587 397 + . gene_id 0 ; sequence GL50803_27056-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 880210 880587 . + . utg308_pilon exonerate:protein2genome:local exon 880210 880587 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 880210 880587 397 + . alignment_id 0 ; Query GL50803_27056-t26_1-p1 ; Align 880210 34 378 utg731_pilon exonerate:protein2genome:local gene 1192047 1192855 1218 + . gene_id 0 ; sequence GL50803_27059-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1192047 1192855 . + . utg731_pilon exonerate:protein2genome:local exon 1192047 1192855 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 1192047 1192855 1218 + . alignment_id 0 ; Query GL50803_27059-t26_1-p1 ; Align 1192047 4 51 ; Align 1192100 22 756 utg1966_pilon exonerate:protein2genome:local gene 29146 152133 201 - . gene_id 0 ; sequence GL50803_27088-t26_1-p1 ; gene_orientation + utg1966_pilon exonerate:protein2genome:local cds 152073 152133 . - . utg1966_pilon exonerate:protein2genome:local exon 152073 152133 . - . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local splice5 152071 152072 . - . intron_id 1 ; splice_site "GT" utg1966_pilon exonerate:protein2genome:local intron 29448 152072 . - . intron_id 1 utg1966_pilon exonerate:protein2genome:local splice3 29448 29449 . - . intron_id 0 ; splice_site "AT" utg1966_pilon exonerate:protein2genome:local cds 29146 29447 . - . utg1966_pilon exonerate:protein2genome:local exon 29146 29447 . - . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 29146 152133 201 - . alignment_id 0 ; Query GL50803_27088-t26_1-p1 ; Align 152134 90 60 ; Align 29446 111 300 utg731_pilon exonerate:protein2genome:local gene 1289036 1289140 137 + . gene_id 0 ; sequence GL50803_27094-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1289036 1289140 . + . utg731_pilon exonerate:protein2genome:local exon 1289036 1289140 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1289036 1289140 137 + . alignment_id 0 ; Query GL50803_27094-t26_1-p1 ; Align 1289036 1 105 utg47_pilon exonerate:protein2genome:local gene 1073807 1074172 516 + . gene_id 0 ; sequence GL50803_2710-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1073807 1074172 . + . utg47_pilon exonerate:protein2genome:local exon 1073807 1074172 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1073807 1074172 516 + . alignment_id 0 ; Query GL50803_2710-t26_1-p1 ; Align 1073807 1 366 utg11_pilon exonerate:protein2genome:local gene 276316 276486 140 + . gene_id 0 ; sequence GL50803_27124-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 276316 276486 . + . utg11_pilon exonerate:protein2genome:local exon 276316 276486 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 276316 276486 140 + . alignment_id 0 ; Query GL50803_27124-t26_1-p1 ; Align 276316 24 171 utg308_pilon exonerate:protein2genome:local gene 298211 298327 126 + . gene_id 0 ; sequence GL50803_2714-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 298211 298327 . + . utg308_pilon exonerate:protein2genome:local exon 298211 298327 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 298211 298327 126 + . alignment_id 0 ; Query GL50803_2714-t26_1-p1 ; Align 298211 1 117 utg64_pilon exonerate:protein2genome:local gene 623081 623317 256 - . gene_id 0 ; sequence GL50803_27141-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 623081 623317 . - . utg64_pilon exonerate:protein2genome:local exon 623081 623317 . - . insertions 0 ; deletions 6 utg64_pilon exonerate:protein2genome:local similarity 623081 623317 256 - . alignment_id 0 ; Query GL50803_27141-t26_1-p1 ; Align 623318 9 75 ; Align 623243 37 21 ; Align 623222 47 141 utg212_pilon exonerate:protein2genome:local gene 73504 73989 760 - . gene_id 0 ; sequence GL50803_27147-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 73504 73989 . - . utg212_pilon exonerate:protein2genome:local exon 73504 73989 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 73504 73989 760 - . alignment_id 0 ; Query GL50803_27147-t26_1-p1 ; Align 73990 6 486 utg349_pilon exonerate:protein2genome:local gene 36547 36856 269 - . gene_id 0 ; sequence GL50803_27190-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 36547 36856 . - . utg349_pilon exonerate:protein2genome:local exon 36547 36856 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 36547 36856 269 - . alignment_id 0 ; Query GL50803_27190-t26_1-p1 ; Align 36857 1 36 ; Align 36820 13 273 utg731_pilon exonerate:protein2genome:local gene 224531 224749 290 + . gene_id 0 ; sequence GL50803_27191-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 224531 224749 . + . utg731_pilon exonerate:protein2genome:local exon 224531 224749 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 224531 224749 290 + . alignment_id 0 ; Query GL50803_27191-t26_1-p1 ; Align 224531 1 219 utg731_pilon exonerate:protein2genome:local gene 223910 224055 122 - . gene_id 0 ; sequence GL50803_27192-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 223910 224055 . - . utg731_pilon exonerate:protein2genome:local exon 223910 224055 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 223910 224055 122 - . alignment_id 0 ; Query GL50803_27192-t26_1-p1 ; Align 224056 5 60 ; Align 223994 25 84 utg731_pilon exonerate:protein2genome:local gene 223426 223834 501 + . gene_id 0 ; sequence GL50803_27193-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 223426 223834 . + . utg731_pilon exonerate:protein2genome:local exon 223426 223834 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 223426 223834 501 + . alignment_id 0 ; Query GL50803_27193-t26_1-p1 ; Align 223426 1 189 ; Align 223616 64 219 utg308_pilon exonerate:protein2genome:local gene 354343 354564 258 - . gene_id 0 ; sequence GL50803_27238-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 354343 354564 . - . utg308_pilon exonerate:protein2genome:local exon 354343 354564 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 354343 354564 258 - . alignment_id 0 ; Query GL50803_27238-t26_1-p1 ; Align 354565 1 222 utg349_pilon exonerate:protein2genome:local gene 399735 399842 126 - . gene_id 0 ; sequence GL50803_2725-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 399735 399842 . - . utg349_pilon exonerate:protein2genome:local exon 399735 399842 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 399735 399842 126 - . alignment_id 0 ; Query GL50803_2725-t26_1-p1 ; Align 399843 1 108 utg349_pilon exonerate:protein2genome:local gene 299383 299754 590 - . gene_id 0 ; sequence GL50803_27266-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 299383 299754 . - . utg349_pilon exonerate:protein2genome:local exon 299383 299754 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 299383 299754 590 - . alignment_id 0 ; Query GL50803_27266-t26_1-p1 ; Align 299755 9 372 utg212_pilon exonerate:protein2genome:local gene 484207 485406 1745 - . gene_id 0 ; sequence GL50803_27293-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 484207 485406 . - . utg212_pilon exonerate:protein2genome:local exon 484207 485406 . - . insertions 3 ; deletions 3 utg212_pilon exonerate:protein2genome:local similarity 484207 485406 1745 - . alignment_id 0 ; Query GL50803_27293-t26_1-p1 ; Align 485407 1 432 ; Align 484972 145 99 ; Align 484873 179 585 ; Align 484288 376 81 utg99_pilon exonerate:protein2genome:local gene 346748 347243 640 - . gene_id 0 ; sequence GL50803_27308-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 346748 347243 . - . utg99_pilon exonerate:protein2genome:local exon 346748 347243 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg99_pilon exonerate:protein2genome:local similarity 346748 347243 640 - . alignment_id 0 ; Query GL50803_27308-t26_1-p1 ; Align 347244 2 186 ; Align 347057 64 309 utg731_pilon exonerate:protein2genome:local gene 294467 296230 2821 + . gene_id 0 ; sequence GL50803_27310-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 294467 296230 . + . utg731_pilon exonerate:protein2genome:local exon 294467 296230 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 294467 296230 2821 + . alignment_id 0 ; Query GL50803_27310-t26_1-p1 ; Align 294467 1 636 ; Align 295106 213 1125 utg47_pilon exonerate:protein2genome:local gene 511554 511874 523 - . gene_id 0 ; sequence GL50803_2732-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 511554 511874 . - . utg47_pilon exonerate:protein2genome:local exon 511554 511874 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 511554 511874 523 - . alignment_id 0 ; Query GL50803_2732-t26_1-p1 ; Align 511875 1 321 utg47_pilon exonerate:protein2genome:local gene 314324 319507 7313 + . gene_id 0 ; sequence GL50803_27326-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 314324 319507 . + . utg47_pilon exonerate:protein2genome:local exon 314324 319507 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 314324 319507 7313 + . alignment_id 0 ; Query GL50803_27326-t26_1-p1 ; Align 314324 1 489 ; Align 314816 164 2382 ; Align 317201 958 2307 utg47_pilon exonerate:protein2genome:local gene 2179127 2180407 1747 - . gene_id 0 ; sequence GL50803_27364-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2179127 2180407 . - . utg47_pilon exonerate:protein2genome:local exon 2179127 2180407 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2179127 2180407 1747 - . alignment_id 0 ; Query GL50803_27364-t26_1-p1 ; Align 2180408 6 1281 utg731_pilon exonerate:protein2genome:local gene 1338284 1338388 151 + . gene_id 0 ; sequence GL50803_27376-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1338284 1338388 . + . utg731_pilon exonerate:protein2genome:local exon 1338284 1338388 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1338284 1338388 151 + . alignment_id 0 ; Query GL50803_27376-t26_1-p1 ; Align 1338284 1 105 utg18_pilon exonerate:protein2genome:local gene 372686 372844 186 - . gene_id 0 ; sequence GL50803_27387-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 372686 372844 . - . utg18_pilon exonerate:protein2genome:local exon 372686 372844 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 372686 372844 186 - . alignment_id 0 ; Query GL50803_27387-t26_1-p1 ; Align 372845 9 159 utg47_pilon exonerate:protein2genome:local gene 938272 938493 283 - . gene_id 0 ; sequence GL50803_27399-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 938272 938493 . - . utg47_pilon exonerate:protein2genome:local exon 938272 938493 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 938272 938493 283 - . alignment_id 0 ; Query GL50803_27399-t26_1-p1 ; Align 938494 2 222 utg308_pilon exonerate:protein2genome:local gene 385127 385531 395 - . gene_id 0 ; sequence GL50803_27423-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 385127 385531 . - . utg308_pilon exonerate:protein2genome:local exon 385127 385531 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 385127 385531 395 - . alignment_id 0 ; Query GL50803_27423-t26_1-p1 ; Align 385532 1 405 utg99_pilon exonerate:protein2genome:local gene 169845 170327 723 + . gene_id 0 ; sequence GL50803_27446-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 169845 170327 . + . utg99_pilon exonerate:protein2genome:local exon 169845 170327 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 169845 170327 723 + . alignment_id 0 ; Query GL50803_27446-t26_1-p1 ; Align 169845 2 483 utg731_pilon exonerate:protein2genome:local gene 499121 499249 201 - . gene_id 0 ; sequence GL50803_27479-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 499121 499249 . - . utg731_pilon exonerate:protein2genome:local exon 499121 499249 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 499121 499249 201 - . alignment_id 0 ; Query GL50803_27479-t26_1-p1 ; Align 499250 1 129 utg47_pilon exonerate:protein2genome:local gene 2154507 2154899 334 - . gene_id 0 ; sequence GL50803_27490-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2154507 2154899 . - . utg47_pilon exonerate:protein2genome:local exon 2154507 2154899 . - . insertions 12 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2154507 2154899 334 - . alignment_id 0 ; Query GL50803_27490-t26_1-p1 ; Align 2154900 1 135 ; Align 2154759 46 129 ; Align 2154624 89 117 utg349_pilon exonerate:protein2genome:local gene 593920 594462 876 + . gene_id 0 ; sequence GL50803_2750-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 593920 594462 . + . utg349_pilon exonerate:protein2genome:local exon 593920 594462 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 593920 594462 876 + . alignment_id 0 ; Query GL50803_2750-t26_1-p1 ; Align 593920 1 543 utg731_pilon exonerate:protein2genome:local gene 711568 711816 225 + . gene_id 0 ; sequence GL50803_27500-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 711568 711816 . + . utg731_pilon exonerate:protein2genome:local exon 711568 711816 . + . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 711568 711816 225 + . alignment_id 0 ; Query GL50803_27500-t26_1-p1 ; Align 711568 1 132 ; Align 711703 45 60 ; Align 711766 65 51 utg18_pilon exonerate:protein2genome:local gene 230570 232001 2258 - . gene_id 0 ; sequence GL50803_27520-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 230570 232001 . - . utg18_pilon exonerate:protein2genome:local exon 230570 232001 . - . insertions 0 ; deletions 0 ; frameshifts 7 utg18_pilon exonerate:protein2genome:local similarity 230570 232001 2258 - . alignment_id 0 ; Query GL50803_27520-t26_1-p1 ; Align 232002 1 36 ; Align 231964 13 27 ; Align 231932 22 1362 utg18_pilon exonerate:protein2genome:local gene 224245 224616 610 + . gene_id 0 ; sequence GL50803_27521-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 224245 224616 . + . utg18_pilon exonerate:protein2genome:local exon 224245 224616 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 224245 224616 610 + . alignment_id 0 ; Query GL50803_27521-t26_1-p1 ; Align 224245 1 372 utg731_pilon exonerate:protein2genome:local gene 107363 107734 610 - . gene_id 0 ; sequence GL50803_27521-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 107363 107734 . - . utg731_pilon exonerate:protein2genome:local exon 107363 107734 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 107363 107734 610 - . alignment_id 0 ; Query GL50803_27521-t26_1-p1 ; Align 107735 1 372 utg64_pilon exonerate:protein2genome:local gene 495831 495989 211 + . gene_id 0 ; sequence GL50803_27522-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 495831 495989 . + . utg64_pilon exonerate:protein2genome:local exon 495831 495989 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 495831 495989 211 + . alignment_id 0 ; Query GL50803_27522-t26_1-p1 ; Align 495831 1 159 utg349_pilon exonerate:protein2genome:local gene 594835 595353 483 + . gene_id 0 ; sequence GL50803_2753-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 594835 595353 . + . utg349_pilon exonerate:protein2genome:local exon 594835 595353 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 594835 595353 483 + . alignment_id 0 ; Query GL50803_2753-t26_1-p1 ; Align 594835 1 330 ; Align 595165 112 189 utg349_pilon exonerate:protein2genome:local gene 595422 596300 1067 + . gene_id 0 ; sequence GL50803_2754-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 595422 596300 . + . utg349_pilon exonerate:protein2genome:local exon 595422 596300 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 595422 596300 1067 + . alignment_id 0 ; Query GL50803_2754-t26_1-p1 ; Align 595422 1 294 ; Align 595716 100 585 utg265_pilon exonerate:protein2genome:local gene 364397 365059 835 - . gene_id 0 ; sequence GL50803_27543-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 364397 365059 . - . utg265_pilon exonerate:protein2genome:local exon 364397 365059 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 364397 365059 835 - . alignment_id 0 ; Query GL50803_27543-t26_1-p1 ; Align 365060 1 663 utg731_pilon exonerate:protein2genome:local gene 310557 332365 165 - . gene_id 0 ; sequence GL50803_27583-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 332203 332365 . - . utg731_pilon exonerate:protein2genome:local exon 332203 332365 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 332201 332202 . - . intron_id 1 ; splice_site "GC" utg731_pilon exonerate:protein2genome:local intron 310586 332202 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 310586 310587 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 310557 310585 . - . utg731_pilon exonerate:protein2genome:local exon 310557 310585 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 310557 332365 165 - . alignment_id 0 ; Query GL50803_27583-t26_1-p1 ; Align 332366 1 162 ; Align 310584 56 27 utg308_pilon exonerate:protein2genome:local gene 604582 607108 3414 - . gene_id 0 ; sequence GL50803_27602-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 604582 607108 . - . utg308_pilon exonerate:protein2genome:local exon 604582 607108 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 604582 607108 3414 - . alignment_id 0 ; Query GL50803_27602-t26_1-p1 ; Align 607109 1 498 ; Align 606610 167 3 ; Align 606607 169 2025 utg731_pilon exonerate:protein2genome:local gene 663837 664055 157 + . gene_id 0 ; sequence GL50803_27610-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 663837 664055 . + . utg731_pilon exonerate:protein2genome:local exon 663837 664055 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 663837 664055 157 + . alignment_id 0 ; Query GL50803_27610-t26_1-p1 ; Align 663837 4 219 utg731_pilon exonerate:protein2genome:local gene 943944 944378 671 + . gene_id 0 ; sequence GL50803_27614-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 943944 944378 . + . utg731_pilon exonerate:protein2genome:local exon 943944 944378 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 943944 944378 671 + . alignment_id 0 ; Query GL50803_27614-t26_1-p1 ; Align 943944 1 435 utg731_pilon exonerate:protein2genome:local gene 953601 953744 162 + . gene_id 0 ; sequence GL50803_27616-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 953601 953744 . + . utg731_pilon exonerate:protein2genome:local exon 953601 953744 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 953601 953744 162 + . alignment_id 0 ; Query GL50803_27616-t26_1-p1 ; Align 953601 1 144 utg11_pilon exonerate:protein2genome:local gene 116255 116392 176 + . gene_id 0 ; sequence GL50803_27623-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 116255 116392 . + . utg11_pilon exonerate:protein2genome:local exon 116255 116392 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 116255 116392 176 + . alignment_id 0 ; Query GL50803_27623-t26_1-p1 ; Align 116255 1 138 utg1966_pilon exonerate:protein2genome:local gene 52716 52856 108 + . gene_id 0 ; sequence GL50803_27629-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 52716 52856 . + . utg1966_pilon exonerate:protein2genome:local exon 52716 52856 . + . insertions 3 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 52716 52856 108 + . alignment_id 0 ; Query GL50803_27629-t26_1-p1 ; Align 52716 1 48 ; Align 52767 17 90 utg11_pilon exonerate:protein2genome:local gene 1150028 1150414 520 - . gene_id 0 ; sequence GL50803_27635-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1150028 1150414 . - . utg11_pilon exonerate:protein2genome:local exon 1150028 1150414 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1150028 1150414 520 - . alignment_id 0 ; Query GL50803_27635-t26_1-p1 ; Align 1150415 1 387 utg265_pilon exonerate:protein2genome:local gene 126126 126554 529 - . gene_id 0 ; sequence GL50803_27652-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 126126 126554 . - . utg265_pilon exonerate:protein2genome:local exon 126126 126554 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 126126 126554 529 - . alignment_id 0 ; Query GL50803_27652-t26_1-p1 ; Align 126555 1 429 utg11_pilon exonerate:protein2genome:local gene 1116039 1116446 614 - . gene_id 0 ; sequence GL50803_27694-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1116039 1116446 . - . utg11_pilon exonerate:protein2genome:local exon 1116039 1116446 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1116039 1116446 614 - . alignment_id 0 ; Query GL50803_27694-t26_1-p1 ; Align 1116447 1 408 utg11_pilon exonerate:protein2genome:local gene 1120347 1120724 540 + . gene_id 0 ; sequence GL50803_27696-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1120347 1120724 . + . utg11_pilon exonerate:protein2genome:local exon 1120347 1120724 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1120347 1120724 540 + . alignment_id 0 ; Query GL50803_27696-t26_1-p1 ; Align 1120347 5 378 utg308_pilon exonerate:protein2genome:local gene 540890 541261 568 - . gene_id 0 ; sequence GL50803_27699-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 540890 541261 . - . utg308_pilon exonerate:protein2genome:local exon 540890 541261 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 540890 541261 568 - . alignment_id 0 ; Query GL50803_27699-t26_1-p1 ; Align 541262 1 372 utg308_pilon exonerate:protein2genome:local gene 546352 546636 291 + . gene_id 0 ; sequence GL50803_27703-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 546352 546636 . + . utg308_pilon exonerate:protein2genome:local exon 546352 546636 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 546352 546636 291 + . alignment_id 0 ; Query GL50803_27703-t26_1-p1 ; Align 546352 3 285 utg47_pilon exonerate:protein2genome:local gene 18957 19085 105 - . gene_id 0 ; sequence GL50803_27712-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 18957 19085 . - . utg47_pilon exonerate:protein2genome:local exon 18957 19085 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 18957 19085 105 - . alignment_id 0 ; Query GL50803_27712-t26_1-p1 ; Align 19086 1 129 utg364_pilon exonerate:protein2genome:local gene 41972 42100 105 + . gene_id 0 ; sequence GL50803_27712-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 41972 42100 . + . utg364_pilon exonerate:protein2genome:local exon 41972 42100 . + . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 41972 42100 105 + . alignment_id 0 ; Query GL50803_27712-t26_1-p1 ; Align 41972 1 129 utg47_pilon exonerate:protein2genome:local gene 19204 19409 189 - . gene_id 0 ; sequence GL50803_27713-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 19204 19409 . - . utg47_pilon exonerate:protein2genome:local exon 19204 19409 . - . insertions 0 ; deletions 0 ; frameshifts 5 utg47_pilon exonerate:protein2genome:local similarity 19204 19409 189 - . alignment_id 0 ; Query GL50803_27713-t26_1-p1 ; Align 19410 49 162 ; Align 19243 103 39 utg364_pilon exonerate:protein2genome:local gene 41649 41854 189 + . gene_id 0 ; sequence GL50803_27713-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 41649 41854 . + . utg364_pilon exonerate:protein2genome:local exon 41649 41854 . + . insertions 0 ; deletions 0 ; frameshifts 5 utg364_pilon exonerate:protein2genome:local similarity 41649 41854 189 + . alignment_id 0 ; Query GL50803_27713-t26_1-p1 ; Align 41649 49 162 ; Align 41816 103 39 utg11_pilon exonerate:protein2genome:local gene 639203 641707 3543 + . gene_id 0 ; sequence GL50803_27717-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 639203 641707 . + . utg11_pilon exonerate:protein2genome:local exon 639203 641707 . + . insertions 6 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 639203 641707 3543 + . alignment_id 0 ; Query GL50803_27717-t26_1-p1 ; Align 639203 1 219 ; Align 639422 75 969 ; Align 640391 400 1251 ; Align 641648 817 60 utg47_pilon exonerate:protein2genome:local gene 1917447 1917710 209 + . gene_id 0 ; sequence GL50803_27724-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1917447 1917710 . + . utg47_pilon exonerate:protein2genome:local exon 1917447 1917710 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1917447 1917710 209 + . alignment_id 0 ; Query GL50803_27724-t26_1-p1 ; Align 1917447 7 63 ; Align 1917513 28 18 ; Align 1917534 34 177 utg731_pilon exonerate:protein2genome:local gene 1521432 1523294 2047 - . gene_id 0 ; sequence GL50803_27735-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1521432 1523294 . - . utg731_pilon exonerate:protein2genome:local exon 1521432 1523294 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1521432 1523294 2047 - . alignment_id 0 ; Query GL50803_27735-t26_1-p1 ; Align 1523295 188 1863 utg212_pilon exonerate:protein2genome:local gene 25463 25945 552 - . gene_id 0 ; sequence GL50803_27739-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 25463 25945 . - . utg212_pilon exonerate:protein2genome:local exon 25463 25945 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 25463 25945 552 - . alignment_id 0 ; Query GL50803_27739-t26_1-p1 ; Align 25946 1 483 utg11_pilon exonerate:protein2genome:local gene 1532924 1533310 617 - . gene_id 0 ; sequence GL50803_27747-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1532924 1533310 . - . utg11_pilon exonerate:protein2genome:local exon 1532924 1533310 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1532924 1533310 617 - . alignment_id 0 ; Query GL50803_27747-t26_1-p1 ; Align 1533311 1 387 utg212_pilon exonerate:protein2genome:local gene 89787 89939 106 - . gene_id 0 ; sequence GL50803_27751-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 89787 89939 . - . utg212_pilon exonerate:protein2genome:local exon 89787 89939 . - . insertions 12 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 89787 89939 106 - . alignment_id 0 ; Query GL50803_27751-t26_1-p1 ; Align 89940 1 39 ; Align 89889 14 102 utg47_pilon exonerate:protein2genome:local gene 1360177 1360596 670 + . gene_id 0 ; sequence GL50803_2777-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1360177 1360596 . + . utg47_pilon exonerate:protein2genome:local exon 1360177 1360596 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1360177 1360596 670 + . alignment_id 0 ; Query GL50803_2777-t26_1-p1 ; Align 1360177 1 420 utg47_pilon exonerate:protein2genome:local gene 1357234 1359465 2979 - . gene_id 0 ; sequence GL50803_2779-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1357234 1359465 . - . utg47_pilon exonerate:protein2genome:local exon 1357234 1359465 . - . insertions 9 ; deletions 7 utg47_pilon exonerate:protein2genome:local similarity 1357234 1359465 2979 - . alignment_id 0 ; Query GL50803_2779-t26_1-p1 ; Align 1359466 1 684 ; Align 1358779 229 309 ; Align 1358470 334 126 ; Align 1358344 377 138 ; Align 1358206 427 573 ; Align 1357627 618 393 utg731_pilon exonerate:protein2genome:local gene 1587874 1588215 431 + . gene_id 0 ; sequence GL50803_27806-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1587874 1588215 . + . utg731_pilon exonerate:protein2genome:local exon 1587874 1588215 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1587874 1588215 431 + . alignment_id 0 ; Query GL50803_27806-t26_1-p1 ; Align 1587874 22 342 utg731_pilon exonerate:protein2genome:local gene 1580871 1581212 431 - . gene_id 0 ; sequence GL50803_27806-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1580871 1581212 . - . utg731_pilon exonerate:protein2genome:local exon 1580871 1581212 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1580871 1581212 431 - . alignment_id 0 ; Query GL50803_27806-t26_1-p1 ; Align 1581213 22 342 utg731_pilon exonerate:protein2genome:local gene 1188106 1188363 225 + . gene_id 0 ; sequence GL50803_27813-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1188106 1188363 . + . utg731_pilon exonerate:protein2genome:local exon 1188106 1188363 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1188106 1188363 225 + . alignment_id 0 ; Query GL50803_27813-t26_1-p1 ; Align 1188106 1 135 ; Align 1188244 46 120 utg731_pilon exonerate:protein2genome:local gene 1172471 1172728 225 - . gene_id 0 ; sequence GL50803_27813-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1172471 1172728 . - . utg731_pilon exonerate:protein2genome:local exon 1172471 1172728 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1172471 1172728 225 - . alignment_id 0 ; Query GL50803_27813-t26_1-p1 ; Align 1172729 1 135 ; Align 1172591 46 120 utg731_pilon exonerate:protein2genome:local gene 1271298 1272185 1311 - . gene_id 0 ; sequence GL50803_27827-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1271298 1272185 . - . utg731_pilon exonerate:protein2genome:local exon 1271298 1272185 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1271298 1272185 1311 - . alignment_id 0 ; Query GL50803_27827-t26_1-p1 ; Align 1272186 1 888 utg731_pilon exonerate:protein2genome:local gene 1277634 1277930 207 - . gene_id 0 ; sequence GL50803_27830-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1277634 1277930 . - . utg731_pilon exonerate:protein2genome:local exon 1277634 1277930 . - . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1277634 1277930 207 - . alignment_id 0 ; Query GL50803_27830-t26_1-p1 ; Align 1277931 1 57 ; Align 1277868 20 234 utg99_pilon exonerate:protein2genome:local gene 244772 245077 443 - . gene_id 0 ; sequence GL50803_27835-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 244772 245077 . - . utg99_pilon exonerate:protein2genome:local exon 244772 245077 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 244772 245077 443 - . alignment_id 0 ; Query GL50803_27835-t26_1-p1 ; Align 245078 1 306 utg99_pilon exonerate:protein2genome:local gene 242384 244000 2078 - . gene_id 0 ; sequence GL50803_27836-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 242384 244000 . - . utg99_pilon exonerate:protein2genome:local exon 242384 244000 . - . insertions 9 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 242384 244000 2078 - . alignment_id 0 ; Query GL50803_27836-t26_1-p1 ; Align 244001 1 747 ; Align 243245 250 861 utg47_pilon exonerate:protein2genome:local gene 680229 680367 178 + . gene_id 0 ; sequence GL50803_27852-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 680229 680367 . + . utg47_pilon exonerate:protein2genome:local exon 680229 680367 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 680229 680367 178 + . alignment_id 0 ; Query GL50803_27852-t26_1-p1 ; Align 680229 2 63 ; Align 680293 23 75 utg47_pilon exonerate:protein2genome:local gene 1482664 1482855 212 + . gene_id 0 ; sequence GL50803_27878-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1482664 1482855 . + . utg47_pilon exonerate:protein2genome:local exon 1482664 1482855 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1482664 1482855 212 + . alignment_id 0 ; Query GL50803_27878-t26_1-p1 ; Align 1482664 1 192 utg47_pilon exonerate:protein2genome:local gene 1488268 1488888 823 - . gene_id 0 ; sequence GL50803_27880-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1488268 1488888 . - . utg47_pilon exonerate:protein2genome:local exon 1488268 1488888 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1488268 1488888 823 - . alignment_id 0 ; Query GL50803_27880-t26_1-p1 ; Align 1488889 1 621 utg265_pilon exonerate:protein2genome:local gene 11230 11322 102 + . gene_id 0 ; sequence GL50803_27883-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 11230 11322 . + . utg265_pilon exonerate:protein2genome:local exon 11230 11322 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 11230 11322 102 + . alignment_id 0 ; Query GL50803_27883-t26_1-p1 ; Align 11230 10 93 utg349_pilon exonerate:protein2genome:local gene 1063864 1064073 351 - . gene_id 0 ; sequence GL50803_27887-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1063864 1064073 . - . utg349_pilon exonerate:protein2genome:local exon 1063864 1064073 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1063864 1064073 351 - . alignment_id 0 ; Query GL50803_27887-t26_1-p1 ; Align 1064074 1 210 utg212_pilon exonerate:protein2genome:local gene 343464 348235 6358 + . gene_id 0 ; sequence GL50803_27896-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 343464 348235 . + . utg212_pilon exonerate:protein2genome:local exon 343464 348235 . + . insertions 3 ; deletions 4 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 343464 348235 6358 + . alignment_id 0 ; Query GL50803_27896-t26_1-p1 ; Align 343464 1 816 ; Align 344282 274 648 ; Align 344933 490 222 ; Align 345155 565 2034 ; Align 347189 1245 1047 utg47_pilon exonerate:protein2genome:local gene 851504 851632 165 + . gene_id 0 ; sequence GL50803_27900-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 851504 851632 . + . utg47_pilon exonerate:protein2genome:local exon 851504 851632 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 851504 851632 165 + . alignment_id 0 ; Query GL50803_27900-t26_1-p1 ; Align 851504 1 69 ; Align 851573 25 60 utg731_pilon exonerate:protein2genome:local gene 1097279 1097638 519 + . gene_id 0 ; sequence GL50803_27910-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1097279 1097638 . + . utg731_pilon exonerate:protein2genome:local exon 1097279 1097638 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1097279 1097638 519 + . alignment_id 0 ; Query GL50803_27910-t26_1-p1 ; Align 1097279 1 360 utg308_pilon exonerate:protein2genome:local gene 444604 444888 429 - . gene_id 0 ; sequence GL50803_27918-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 444604 444888 . - . utg308_pilon exonerate:protein2genome:local exon 444604 444888 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 444604 444888 429 - . alignment_id 0 ; Query GL50803_27918-t26_1-p1 ; Align 444889 1 285 utg11_pilon exonerate:protein2genome:local gene 1303458 1305815 3790 - . gene_id 0 ; sequence GL50803_27925-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1303458 1305815 . - . utg11_pilon exonerate:protein2genome:local exon 1303458 1305815 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1303458 1305815 3790 - . alignment_id 0 ; Query GL50803_27925-t26_1-p1 ; Align 1305816 1 2358 utg265_pilon exonerate:protein2genome:local gene 746382 746573 135 - . gene_id 0 ; sequence GL50803_27939-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 746382 746573 . - . utg265_pilon exonerate:protein2genome:local exon 746382 746573 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 746382 746573 135 - . alignment_id 0 ; Query GL50803_27939-t26_1-p1 ; Align 746574 4 192 utg11_pilon exonerate:protein2genome:local gene 483843 483968 117 - . gene_id 0 ; sequence GL50803_27947-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 483843 483968 . - . utg11_pilon exonerate:protein2genome:local exon 483843 483968 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 483843 483968 117 - . alignment_id 0 ; Query GL50803_27947-t26_1-p1 ; Align 483969 24 126 utg212_pilon exonerate:protein2genome:local gene 382535 382810 403 - . gene_id 0 ; sequence GL50803_27953-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 382535 382810 . - . utg212_pilon exonerate:protein2genome:local exon 382535 382810 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 382535 382810 403 - . alignment_id 0 ; Query GL50803_27953-t26_1-p1 ; Align 382811 1 276 utg64_pilon exonerate:protein2genome:local gene 311401 313110 2862 - . gene_id 0 ; sequence GL50803_2796-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 311401 313110 . - . utg64_pilon exonerate:protein2genome:local exon 311401 313110 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 311401 313110 2862 - . alignment_id 0 ; Query GL50803_2796-t26_1-p1 ; Align 313111 1 1710 utg349_pilon exonerate:protein2genome:local gene 1015826 1015930 126 - . gene_id 0 ; sequence GL50803_28015-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1015826 1015930 . - . utg349_pilon exonerate:protein2genome:local exon 1015826 1015930 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1015826 1015930 126 - . alignment_id 0 ; Query GL50803_28015-t26_1-p1 ; Align 1015931 1 105 utg11_pilon exonerate:protein2genome:local gene 1037888 1038286 516 + . gene_id 0 ; sequence GL50803_28022-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1037888 1038286 . + . utg11_pilon exonerate:protein2genome:local exon 1037888 1038286 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1037888 1038286 516 + . alignment_id 0 ; Query GL50803_28022-t26_1-p1 ; Align 1037888 1 399 utg47_pilon exonerate:protein2genome:local gene 1372606 1373177 768 - . gene_id 0 ; sequence GL50803_28057-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1372606 1373177 . - . utg47_pilon exonerate:protein2genome:local exon 1372606 1373177 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1372606 1373177 768 - . alignment_id 0 ; Query GL50803_28057-t26_1-p1 ; Align 1373178 1 297 ; Align 1372879 100 3 ; Align 1372876 102 270 utg47_pilon exonerate:protein2genome:local gene 2002469 2002606 208 - . gene_id 0 ; sequence GL50803_28060-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2002469 2002606 . - . utg47_pilon exonerate:protein2genome:local exon 2002469 2002606 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2002469 2002606 208 - . alignment_id 0 ; Query GL50803_28060-t26_1-p1 ; Align 2002607 1 138 utg47_pilon exonerate:protein2genome:local gene 2005476 2005934 719 - . gene_id 0 ; sequence GL50803_28064-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2005476 2005934 . - . utg47_pilon exonerate:protein2genome:local exon 2005476 2005934 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2005476 2005934 719 - . alignment_id 0 ; Query GL50803_28064-t26_1-p1 ; Align 2005935 1 459 utg47_pilon exonerate:protein2genome:local gene 2010578 2010829 321 - . gene_id 0 ; sequence GL50803_28069-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2010578 2010829 . - . utg47_pilon exonerate:protein2genome:local exon 2010578 2010829 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2010578 2010829 321 - . alignment_id 0 ; Query GL50803_28069-t26_1-p1 ; Align 2010830 1 252 utg11_pilon exonerate:protein2genome:local gene 1255698 1255886 220 - . gene_id 0 ; sequence GL50803_28085-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1255698 1255886 . - . utg11_pilon exonerate:protein2genome:local exon 1255698 1255886 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1255698 1255886 220 - . alignment_id 0 ; Query GL50803_28085-t26_1-p1 ; Align 1255887 1 189 utg731_pilon exonerate:protein2genome:local gene 1250833 1250940 103 - . gene_id 0 ; sequence GL50803_28104-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1250833 1250940 . - . utg731_pilon exonerate:protein2genome:local exon 1250833 1250940 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1250833 1250940 103 - . alignment_id 0 ; Query GL50803_28104-t26_1-p1 ; Align 1250941 1 108 utg11_pilon exonerate:protein2genome:local gene 1096139 1096345 248 - . gene_id 0 ; sequence GL50803_28112-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1096139 1096345 . - . utg11_pilon exonerate:protein2genome:local exon 1096139 1096345 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1096139 1096345 248 - . alignment_id 0 ; Query GL50803_28112-t26_1-p1 ; Align 1096346 1 207 utg11_pilon exonerate:protein2genome:local gene 93932 95098 1743 - . gene_id 0 ; sequence GL50803_2812-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 93932 95098 . - . utg11_pilon exonerate:protein2genome:local exon 93932 95098 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 93932 95098 1743 - . alignment_id 0 ; Query GL50803_2812-t26_1-p1 ; Align 95099 1 1167 utg212_pilon exonerate:protein2genome:local gene 126081 126296 246 + . gene_id 0 ; sequence GL50803_28126-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 126081 126296 . + . utg212_pilon exonerate:protein2genome:local exon 126081 126296 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 126081 126296 246 + . alignment_id 0 ; Query GL50803_28126-t26_1-p1 ; Align 126081 1 216 utg349_pilon exonerate:protein2genome:local gene 1697619 1697870 259 + . gene_id 0 ; sequence GL50803_28138-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1697619 1697870 . + . utg349_pilon exonerate:protein2genome:local exon 1697619 1697870 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1697619 1697870 259 + . alignment_id 0 ; Query GL50803_28138-t26_1-p1 ; Align 1697619 1 252 utg731_pilon exonerate:protein2genome:local gene 254706 254876 133 + . gene_id 0 ; sequence GL50803_28165-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 254706 254876 . + . utg731_pilon exonerate:protein2genome:local exon 254706 254876 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 254706 254876 133 + . alignment_id 0 ; Query GL50803_28165-t26_1-p1 ; Align 254706 1 93 ; Align 254802 32 75 utg349_pilon exonerate:protein2genome:local gene 1192212 1192328 140 + . gene_id 0 ; sequence GL50803_28178-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1192212 1192328 . + . utg349_pilon exonerate:protein2genome:local exon 1192212 1192328 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1192212 1192328 140 + . alignment_id 0 ; Query GL50803_28178-t26_1-p1 ; Align 1192212 1 117 utg47_pilon exonerate:protein2genome:local gene 2219321 2219821 779 - . gene_id 0 ; sequence GL50803_28183-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2219321 2219821 . - . utg47_pilon exonerate:protein2genome:local exon 2219321 2219821 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2219321 2219821 779 - . alignment_id 0 ; Query GL50803_28183-t26_1-p1 ; Align 2219822 1 501 utg731_pilon exonerate:protein2genome:local gene 644605 644730 179 - . gene_id 0 ; sequence GL50803_28190-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 644605 644730 . - . utg731_pilon exonerate:protein2genome:local exon 644605 644730 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 644605 644730 179 - . alignment_id 0 ; Query GL50803_28190-t26_1-p1 ; Align 644731 1 126 utg47_pilon exonerate:protein2genome:local gene 519152 519286 162 + . gene_id 0 ; sequence GL50803_28204-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 519152 519286 . + . utg47_pilon exonerate:protein2genome:local exon 519152 519286 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 519152 519286 162 + . alignment_id 0 ; Query GL50803_28204-t26_1-p1 ; Align 519152 2 135 utg47_pilon exonerate:protein2genome:local gene 518471 518707 382 - . gene_id 0 ; sequence GL50803_28205-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 518471 518707 . - . utg47_pilon exonerate:protein2genome:local exon 518471 518707 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 518471 518707 382 - . alignment_id 0 ; Query GL50803_28205-t26_1-p1 ; Align 518708 1 237 utg11_pilon exonerate:protein2genome:local gene 609182 610106 1126 + . gene_id 0 ; sequence GL50803_2822-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 609182 610106 . + . utg11_pilon exonerate:protein2genome:local exon 609182 610106 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 609182 610106 1126 + . alignment_id 0 ; Query GL50803_2822-t26_1-p1 ; Align 609182 1 420 ; Align 609602 142 471 ; Align 610074 299 33 utg64_pilon exonerate:protein2genome:local gene 737789 738142 483 - . gene_id 0 ; sequence GL50803_28232-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 737789 738142 . - . utg64_pilon exonerate:protein2genome:local exon 737789 738142 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 737789 738142 483 - . alignment_id 0 ; Query GL50803_28232-t26_1-p1 ; Align 738143 1 354 utg18_pilon exonerate:protein2genome:local gene 155799 156653 1317 + . gene_id 0 ; sequence GL50803_28234-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 155799 156653 . + . utg18_pilon exonerate:protein2genome:local exon 155799 156653 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 155799 156653 1317 + . alignment_id 0 ; Query GL50803_28234-t26_1-p1 ; Align 155799 1 855 utg18_pilon exonerate:protein2genome:local gene 162488 162658 166 + . gene_id 0 ; sequence GL50803_28236-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 162488 162658 . + . utg18_pilon exonerate:protein2genome:local exon 162488 162658 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 162488 162658 166 + . alignment_id 0 ; Query GL50803_28236-t26_1-p1 ; Align 162488 1 171 utg11_pilon exonerate:protein2genome:local gene 610996 611499 712 + . gene_id 0 ; sequence GL50803_2824-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 610996 611499 . + . utg11_pilon exonerate:protein2genome:local exon 610996 611499 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 610996 611499 712 + . alignment_id 0 ; Query GL50803_2824-t26_1-p1 ; Align 610996 1 72 ; Align 611068 27 432 utg11_pilon exonerate:protein2genome:local gene 611571 611936 593 + . gene_id 0 ; sequence GL50803_2825-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 611571 611936 . + . utg11_pilon exonerate:protein2genome:local exon 611571 611936 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 611571 611936 593 + . alignment_id 0 ; Query GL50803_2825-t26_1-p1 ; Align 611571 1 366 utg99_pilon exonerate:protein2genome:local gene 293524 293721 272 - . gene_id 0 ; sequence GL50803_28271-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 293524 293721 . - . utg99_pilon exonerate:protein2genome:local exon 293524 293721 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 293524 293721 272 - . alignment_id 0 ; Query GL50803_28271-t26_1-p1 ; Align 293722 4 198 utg99_pilon exonerate:protein2genome:local gene 172996 173424 545 - . gene_id 0 ; sequence GL50803_2830-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 172996 173424 . - . utg99_pilon exonerate:protein2genome:local exon 172996 173424 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 172996 173424 545 - . alignment_id 0 ; Query GL50803_2830-t26_1-p1 ; Align 173425 1 429 utg99_pilon exonerate:protein2genome:local gene 173503 174222 1050 - . gene_id 0 ; sequence GL50803_2833-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 173503 174222 . - . utg99_pilon exonerate:protein2genome:local exon 173503 174222 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 173503 174222 1050 - . alignment_id 0 ; Query GL50803_2833-t26_1-p1 ; Align 174223 1 720 utg11_pilon exonerate:protein2genome:local gene 900401 901267 1245 + . gene_id 0 ; sequence GL50803_28336-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 900401 901267 . + . utg11_pilon exonerate:protein2genome:local exon 900401 901267 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 900401 901267 1245 + . alignment_id 0 ; Query GL50803_28336-t26_1-p1 ; Align 900401 1 867 utg11_pilon exonerate:protein2genome:local gene 896668 897298 829 - . gene_id 0 ; sequence GL50803_28337-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 896668 897298 . - . utg11_pilon exonerate:protein2genome:local exon 896668 897298 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 896668 897298 829 - . alignment_id 0 ; Query GL50803_28337-t26_1-p1 ; Align 897299 4 603 ; Align 896695 205 27 utg99_pilon exonerate:protein2genome:local gene 174356 175657 1428 - . gene_id 0 ; sequence GL50803_2834-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 174985 175657 . - . utg99_pilon exonerate:protein2genome:local exon 174985 175657 . - . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 174983 174984 . - . intron_id 1 ; splice_site "CT" utg99_pilon exonerate:protein2genome:local intron 174889 174984 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 174889 174890 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 174356 174888 . - . utg99_pilon exonerate:protein2genome:local exon 174356 174888 . - . insertions 18 ; deletions 3 utg99_pilon exonerate:protein2genome:local similarity 174356 175657 1428 - . alignment_id 0 ; Query GL50803_2834-t26_1-p1 ; Align 175658 1 642 ; Align 175013 215 27 ; Align 174887 225 63 ; Align 174821 246 237 ; Align 174569 325 108 ; Align 174461 362 39 ; Align 174422 377 66 utg265_pilon exonerate:protein2genome:local gene 691122 691376 339 + . gene_id 0 ; sequence GL50803_28348-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 691122 691376 . + . utg265_pilon exonerate:protein2genome:local exon 691122 691376 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 691122 691376 339 + . alignment_id 0 ; Query GL50803_28348-t26_1-p1 ; Align 691122 1 255 utg731_pilon exonerate:protein2genome:local gene 361753 366292 6407 + . gene_id 0 ; sequence GL50803_28379-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 361753 364347 . + . utg731_pilon exonerate:protein2genome:local exon 361753 364347 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local splice5 364348 364349 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 364348 364377 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 364376 364377 . + . intron_id 0 ; splice_site "CG" utg731_pilon exonerate:protein2genome:local cds 364378 366292 . + . utg731_pilon exonerate:protein2genome:local exon 364378 366292 . + . insertions 6 ; deletions 1 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 361753 366292 6407 + . alignment_id 0 ; Query GL50803_28379-t26_1-p1 ; Align 361753 1 1683 ; Align 363436 563 912 ; Align 364378 867 9 ; Align 364387 871 1710 ; Align 366103 1441 87 ; Align 366191 1470 102 utg731_pilon exonerate:protein2genome:local gene 349919 350059 197 + . gene_id 0 ; sequence GL50803_28385-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 349919 350059 . + . utg731_pilon exonerate:protein2genome:local exon 349919 350059 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 349919 350059 197 + . alignment_id 0 ; Query GL50803_28385-t26_1-p1 ; Align 349919 1 141 utg349_pilon exonerate:protein2genome:local gene 1217727 1217816 108 - . gene_id 0 ; sequence GL50803_28388-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1217727 1217816 . - . utg349_pilon exonerate:protein2genome:local exon 1217727 1217816 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1217727 1217816 108 - . alignment_id 0 ; Query GL50803_28388-t26_1-p1 ; Align 1217817 15 90 utg47_pilon exonerate:protein2genome:local gene 806266 806388 131 - . gene_id 0 ; sequence GL50803_28397-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 806266 806388 . - . utg47_pilon exonerate:protein2genome:local exon 806266 806388 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 806266 806388 131 - . alignment_id 0 ; Query GL50803_28397-t26_1-p1 ; Align 806389 1 123 utg265_pilon exonerate:protein2genome:local gene 600553 600963 499 + . gene_id 0 ; sequence GL50803_28433-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 600553 600963 . + . utg265_pilon exonerate:protein2genome:local exon 600553 600963 . + . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 600553 600963 499 + . alignment_id 0 ; Query GL50803_28433-t26_1-p1 ; Align 600553 4 51 ; Align 600604 22 360 utg64_pilon exonerate:protein2genome:local gene 61026 61241 195 - . gene_id 0 ; sequence GL50803_28461-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 61026 61241 . - . utg64_pilon exonerate:protein2genome:local exon 61026 61241 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 61026 61241 195 - . alignment_id 0 ; Query GL50803_28461-t26_1-p1 ; Align 61242 1 216 utg308_pilon exonerate:protein2genome:local gene 751384 751551 243 + . gene_id 0 ; sequence GL50803_28464-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 751384 751551 . + . utg308_pilon exonerate:protein2genome:local exon 751384 751551 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 751384 751551 243 + . alignment_id 0 ; Query GL50803_28464-t26_1-p1 ; Align 751384 1 168 utg47_pilon exonerate:protein2genome:local gene 1081100 1081285 344 - . gene_id 0 ; sequence GL50803_28477-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1081100 1081285 . - . utg47_pilon exonerate:protein2genome:local exon 1081100 1081285 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1081100 1081285 344 - . alignment_id 0 ; Query GL50803_28477-t26_1-p1 ; Align 1081286 1 186 utg11_pilon exonerate:protein2genome:local gene 1264836 1265570 750 - . gene_id 0 ; sequence GL50803_2848-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1264836 1265570 . - . utg11_pilon exonerate:protein2genome:local exon 1264836 1265570 . - . insertions 12 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 1264836 1265570 750 - . alignment_id 0 ; Query GL50803_2848-t26_1-p1 ; Align 1265571 8 99 ; Align 1265472 44 87 ; Align 1265373 73 537 utg349_pilon exonerate:protein2genome:local gene 116762 116872 119 + . gene_id 0 ; sequence GL50803_28498-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 116762 116872 . + . utg349_pilon exonerate:protein2genome:local exon 116762 116872 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 116762 116872 119 + . alignment_id 0 ; Query GL50803_28498-t26_1-p1 ; Align 116762 2 111 utg64_pilon exonerate:protein2genome:local gene 682274 682447 158 - . gene_id 0 ; sequence GL50803_28509-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 682274 682447 . - . utg64_pilon exonerate:protein2genome:local exon 682274 682447 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 682274 682447 158 - . alignment_id 0 ; Query GL50803_28509-t26_1-p1 ; Align 682448 1 174 utg99_pilon exonerate:protein2genome:local gene 369420 370673 1977 + . gene_id 0 ; sequence GL50803_2851-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 369420 370673 . + . utg99_pilon exonerate:protein2genome:local exon 369420 370673 . + . insertions 0 ; deletions 7 utg99_pilon exonerate:protein2genome:local similarity 369420 370673 1977 + . alignment_id 0 ; Query GL50803_2851-t26_1-p1 ; Align 369420 1 660 ; Align 370080 226 87 ; Align 370167 257 507 utg349_pilon exonerate:protein2genome:local gene 1253864 1254133 338 + . gene_id 0 ; sequence GL50803_28514-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1253864 1254133 . + . utg349_pilon exonerate:protein2genome:local exon 1253864 1254133 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1253864 1254133 338 + . alignment_id 0 ; Query GL50803_28514-t26_1-p1 ; Align 1253864 1 270 utg47_pilon exonerate:protein2genome:local gene 1119862 1120176 494 + . gene_id 0 ; sequence GL50803_28526-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1119862 1120176 . + . utg47_pilon exonerate:protein2genome:local exon 1119862 1120176 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1119862 1120176 494 + . alignment_id 0 ; Query GL50803_28526-t26_1-p1 ; Align 1119862 1 315 utg349_pilon exonerate:protein2genome:local gene 382335 382733 641 + . gene_id 0 ; sequence GL50803_28549-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 382335 382733 . + . utg349_pilon exonerate:protein2genome:local exon 382335 382733 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 382335 382733 641 + . alignment_id 0 ; Query GL50803_28549-t26_1-p1 ; Align 382335 1 399 utg349_pilon exonerate:protein2genome:local gene 378577 378693 115 + . gene_id 0 ; sequence GL50803_28552-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 378577 378693 . + . utg349_pilon exonerate:protein2genome:local exon 378577 378693 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 378577 378693 115 + . alignment_id 0 ; Query GL50803_28552-t26_1-p1 ; Align 378577 3 117 utg349_pilon exonerate:protein2genome:local gene 470185 500022 131 + . gene_id 0 ; sequence GL50803_28576-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 470185 470324 . + . utg349_pilon exonerate:protein2genome:local exon 470185 470324 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 470325 470326 . + . intron_id 1 ; splice_site "CT" utg349_pilon exonerate:protein2genome:local intron 470325 499982 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 499981 499982 . + . intron_id 0 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 499983 500022 . + . utg349_pilon exonerate:protein2genome:local exon 499983 500022 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 470185 500022 131 + . alignment_id 0 ; Query GL50803_28576-t26_1-p1 ; Align 470185 1 138 ; Align 499984 48 39 utg47_pilon exonerate:protein2genome:local gene 1898429 1898638 213 - . gene_id 0 ; sequence GL50803_28587-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1898429 1898638 . - . utg47_pilon exonerate:protein2genome:local exon 1898429 1898638 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1898429 1898638 213 - . alignment_id 0 ; Query GL50803_28587-t26_1-p1 ; Align 1898639 1 210 utg308_pilon exonerate:protein2genome:local gene 663440 664618 1629 - . gene_id 0 ; sequence GL50803_2860-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 663440 664618 . - . utg308_pilon exonerate:protein2genome:local exon 663440 664618 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 663440 664618 1629 - . alignment_id 0 ; Query GL50803_2860-t26_1-p1 ; Align 664619 1 1179 utg308_pilon exonerate:protein2genome:local gene 664575 665075 528 - . gene_id 0 ; sequence GL50803_2861-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 664575 665075 . - . utg308_pilon exonerate:protein2genome:local exon 664575 665075 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 664575 665075 528 - . alignment_id 0 ; Query GL50803_2861-t26_1-p1 ; Align 665076 5 501 utg11_pilon exonerate:protein2genome:local gene 1501194 1501637 409 - . gene_id 0 ; sequence GL50803_28611-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1501194 1501637 . - . utg11_pilon exonerate:protein2genome:local exon 1501194 1501637 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1501194 1501637 409 - . alignment_id 0 ; Query GL50803_28611-t26_1-p1 ; Align 1501638 1 444 utg11_pilon exonerate:protein2genome:local gene 1510870 1511067 284 - . gene_id 0 ; sequence GL50803_28614-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1510870 1511067 . - . utg11_pilon exonerate:protein2genome:local exon 1510870 1511067 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1510870 1511067 284 - . alignment_id 0 ; Query GL50803_28614-t26_1-p1 ; Align 1511068 5 198 utg265_pilon exonerate:protein2genome:local gene 843654 843806 189 - . gene_id 0 ; sequence GL50803_28619-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 843654 843806 . - . utg265_pilon exonerate:protein2genome:local exon 843654 843806 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 843654 843806 189 - . alignment_id 0 ; Query GL50803_28619-t26_1-p1 ; Align 843807 12 153 utg265_pilon exonerate:protein2genome:local gene 840580 840993 603 - . gene_id 0 ; sequence GL50803_28620-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 840580 840993 . - . utg265_pilon exonerate:protein2genome:local exon 840580 840993 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 840580 840993 603 - . alignment_id 0 ; Query GL50803_28620-t26_1-p1 ; Align 840994 1 414 utg265_pilon exonerate:protein2genome:local gene 692754 869163 404 + . gene_id 0 ; sequence GL50803_28626-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 692754 692917 . + . utg265_pilon exonerate:protein2genome:local exon 692754 692917 . + . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 692918 692919 . + . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 692918 692977 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 692976 692977 . + . intron_id 0 ; splice_site "AC" utg265_pilon exonerate:protein2genome:local cds 692978 693111 . + . utg265_pilon exonerate:protein2genome:local exon 692978 693111 . + . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local splice5 693112 693113 . + . intron_id 2 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 693112 868975 . + . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 868974 868975 . + . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 868976 869163 . + . utg265_pilon exonerate:protein2genome:local exon 868976 869163 . + . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 692754 869163 404 + . alignment_id 0 ; Query GL50803_28626-t26_1-p1 ; Align 692754 5 57 ; Align 692814 24 102 ; Align 692979 59 75 ; Align 693054 85 30 ; Align 693084 96 27 ; Align 868978 106 36 ; Align 869014 119 150 utg47_pilon exonerate:protein2genome:local gene 1169196 1170047 867 - . gene_id 0 ; sequence GL50803_28629-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1169196 1170047 . - . utg47_pilon exonerate:protein2genome:local exon 1169196 1170047 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1169196 1170047 867 - . alignment_id 0 ; Query GL50803_28629-t26_1-p1 ; Align 1170048 1 516 ; Align 1169532 176 336 utg308_pilon exonerate:protein2genome:local gene 610111 610953 867 + . gene_id 0 ; sequence GL50803_28629-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 610111 610953 . + . utg308_pilon exonerate:protein2genome:local exon 610111 610953 . + . insertions 0 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 610111 610953 867 + . alignment_id 0 ; Query GL50803_28629-t26_1-p1 ; Align 610111 1 516 ; Align 610627 176 327 utg265_pilon exonerate:protein2genome:local gene 627840 628208 556 + . gene_id 0 ; sequence GL50803_2863-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 627840 628208 . + . utg265_pilon exonerate:protein2genome:local exon 627840 628208 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 627840 628208 556 + . alignment_id 0 ; Query GL50803_2863-t26_1-p1 ; Align 627840 1 369 utg47_pilon exonerate:protein2genome:local gene 1161262 1161381 123 + . gene_id 0 ; sequence GL50803_28630-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1161262 1161381 . + . utg47_pilon exonerate:protein2genome:local exon 1161262 1161381 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1161262 1161381 123 + . alignment_id 0 ; Query GL50803_28630-t26_1-p1 ; Align 1161262 16 120 utg349_pilon exonerate:protein2genome:local gene 686110 689799 3049 - . gene_id 0 ; sequence GL50803_28635-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 688046 689799 . - . utg349_pilon exonerate:protein2genome:local exon 688046 689799 . - . insertions 0 ; deletions 5 utg349_pilon exonerate:protein2genome:local splice5 688044 688045 . - . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 688001 688045 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 688001 688002 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 686110 688000 . - . utg349_pilon exonerate:protein2genome:local exon 686110 688000 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 686110 689799 3049 - . alignment_id 0 ; Query GL50803_28635-t26_1-p1 ; Align 689800 357 180 ; Align 689620 420 30 ; Align 689590 431 141 ; Align 689449 479 1401 ; Align 688000 947 168 ; Align 687832 1004 753 ; Align 687079 1256 516 ; Align 686563 1429 453 utg265_pilon exonerate:protein2genome:local gene 626110 627723 2305 + . gene_id 0 ; sequence GL50803_2864-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 626110 627723 . + . utg265_pilon exonerate:protein2genome:local exon 626110 627723 . + . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 626110 627723 2305 + . alignment_id 0 ; Query GL50803_2864-t26_1-p1 ; Align 626110 39 864 ; Align 626974 328 279 ; Align 627253 423 471 utg47_pilon exonerate:protein2genome:local gene 2139748 2141252 2055 + . gene_id 0 ; sequence GL50803_28651-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2139748 2141252 . + . utg47_pilon exonerate:protein2genome:local exon 2139748 2141252 . + . insertions 6 ; deletions 0 ; frameshifts 5 utg47_pilon exonerate:protein2genome:local similarity 2139748 2141252 2055 + . alignment_id 0 ; Query GL50803_28651-t26_1-p1 ; Align 2139748 1 549 ; Align 2140303 184 153 ; Align 2140461 235 792 utg11_pilon exonerate:protein2genome:local gene 460340 460780 660 + . gene_id 0 ; sequence GL50803_28657-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 460340 460780 . + . utg11_pilon exonerate:protein2genome:local exon 460340 460780 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 460340 460780 660 + . alignment_id 0 ; Query GL50803_28657-t26_1-p1 ; Align 460340 1 441 utg47_pilon exonerate:protein2genome:local gene 1604771 1605640 1330 + . gene_id 0 ; sequence GL50803_28666-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1604771 1605640 . + . utg47_pilon exonerate:protein2genome:local exon 1604771 1605640 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1604771 1605640 1330 + . alignment_id 0 ; Query GL50803_28666-t26_1-p1 ; Align 1604771 1 870 utg349_pilon exonerate:protein2genome:local gene 456722 457090 498 - . gene_id 0 ; sequence GL50803_28675-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 456722 457090 . - . utg349_pilon exonerate:protein2genome:local exon 456722 457090 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 456722 457090 498 - . alignment_id 0 ; Query GL50803_28675-t26_1-p1 ; Align 457091 1 369 utg731_pilon exonerate:protein2genome:local gene 1482914 1483297 571 - . gene_id 0 ; sequence GL50803_28696-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1482914 1483297 . - . utg731_pilon exonerate:protein2genome:local exon 1482914 1483297 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1482914 1483297 571 - . alignment_id 0 ; Query GL50803_28696-t26_1-p1 ; Align 1483298 1 384 utg18_pilon exonerate:protein2genome:local gene 290120 290818 1035 - . gene_id 0 ; sequence GL50803_28699-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 290120 290818 . - . utg18_pilon exonerate:protein2genome:local exon 290120 290818 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 290120 290818 1035 - . alignment_id 0 ; Query GL50803_28699-t26_1-p1 ; Align 290819 1 699 utg47_pilon exonerate:protein2genome:local gene 573365 573847 502 + . gene_id 0 ; sequence GL50803_28703-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 573365 573847 . + . utg47_pilon exonerate:protein2genome:local exon 573365 573847 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 573365 573847 502 + . alignment_id 0 ; Query GL50803_28703-t26_1-p1 ; Align 573365 7 135 ; Align 573503 52 345 utg47_pilon exonerate:protein2genome:local gene 281615 282112 670 + . gene_id 0 ; sequence GL50803_28737-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 281615 282112 . + . utg47_pilon exonerate:protein2genome:local exon 281615 282112 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 281615 282112 670 + . alignment_id 0 ; Query GL50803_28737-t26_1-p1 ; Align 281615 1 498 utg265_pilon exonerate:protein2genome:local gene 1068319 1068471 123 - . gene_id 0 ; sequence GL50803_28748-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1068319 1068471 . - . utg265_pilon exonerate:protein2genome:local exon 1068319 1068471 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1068319 1068471 123 - . alignment_id 0 ; Query GL50803_28748-t26_1-p1 ; Align 1068472 1 153 utg308_pilon exonerate:protein2genome:local gene 766250 766765 762 + . gene_id 0 ; sequence GL50803_2876-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 766250 766765 . + . utg308_pilon exonerate:protein2genome:local exon 766250 766765 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 766250 766765 762 + . alignment_id 0 ; Query GL50803_2876-t26_1-p1 ; Align 766250 1 516 utg11_pilon exonerate:protein2genome:local gene 1572972 1573997 1376 - . gene_id 0 ; sequence GL50803_28779-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1572972 1573997 . - . utg11_pilon exonerate:protein2genome:local exon 1572972 1573997 . - . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 1572972 1573997 1376 - . alignment_id 0 ; Query GL50803_28779-t26_1-p1 ; Align 1573998 1 555 ; Align 1573443 187 171 ; Align 1573272 246 300 utg731_pilon exonerate:protein2genome:local gene 532299 532800 426 + . gene_id 0 ; sequence GL50803_28829-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 532299 532800 . + . utg731_pilon exonerate:protein2genome:local exon 532299 532800 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 532299 532800 426 + . alignment_id 0 ; Query GL50803_28829-t26_1-p1 ; Align 532299 1 420 ; Align 532720 141 81 utg731_pilon exonerate:protein2genome:local gene 535701 537095 1836 - . gene_id 0 ; sequence GL50803_28831-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 535701 537095 . - . utg731_pilon exonerate:protein2genome:local exon 535701 537095 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 535701 537095 1836 - . alignment_id 0 ; Query GL50803_28831-t26_1-p1 ; Align 537096 1 690 ; Align 536406 233 705 utg731_pilon exonerate:protein2genome:local gene 549700 550807 1304 + . gene_id 0 ; sequence GL50803_28832-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 549700 550807 . + . utg731_pilon exonerate:protein2genome:local exon 549700 550807 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 549700 550807 1304 + . alignment_id 0 ; Query GL50803_28832-t26_1-p1 ; Align 549700 1 945 ; Align 550646 316 162 utg11_pilon exonerate:protein2genome:local gene 820026 820481 564 - . gene_id 0 ; sequence GL50803_28856-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 820026 820481 . - . utg11_pilon exonerate:protein2genome:local exon 820026 820481 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 820026 820481 564 - . alignment_id 0 ; Query GL50803_28856-t26_1-p1 ; Align 820482 2 456 utg349_pilon exonerate:protein2genome:local gene 1618935 1619099 178 + . gene_id 0 ; sequence GL50803_28862-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1618935 1619099 . + . utg349_pilon exonerate:protein2genome:local exon 1618935 1619099 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1618935 1619099 178 + . alignment_id 0 ; Query GL50803_28862-t26_1-p1 ; Align 1618935 1 165 utg212_pilon exonerate:protein2genome:local gene 223286 223852 589 + . gene_id 0 ; sequence GL50803_28888-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 223286 223852 . + . utg212_pilon exonerate:protein2genome:local exon 223286 223852 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 223286 223852 589 + . alignment_id 0 ; Query GL50803_28888-t26_1-p1 ; Align 223286 1 567 utg349_pilon exonerate:protein2genome:local gene 940382 941311 1389 + . gene_id 0 ; sequence GL50803_28906-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 940382 941311 . + . utg349_pilon exonerate:protein2genome:local exon 940382 941311 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 940382 941311 1389 + . alignment_id 0 ; Query GL50803_28906-t26_1-p1 ; Align 940382 1 930 utg18_pilon exonerate:protein2genome:local gene 530045 531694 2686 + . gene_id 0 ; sequence GL50803_28954-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 530045 531694 . + . utg18_pilon exonerate:protein2genome:local exon 530045 531694 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 530045 531694 2686 + . alignment_id 0 ; Query GL50803_28954-t26_1-p1 ; Align 530045 1 1650 utg47_pilon exonerate:protein2genome:local gene 884500 885423 1159 + . gene_id 0 ; sequence GL50803_28962-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 884500 885423 . + . utg47_pilon exonerate:protein2genome:local exon 884500 885423 . + . insertions 6 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 884500 885423 1159 + . alignment_id 0 ; Query GL50803_28962-t26_1-p1 ; Align 884500 1 201 ; Align 884701 69 126 ; Align 884830 111 393 ; Align 885226 242 198 utg11_pilon exonerate:protein2genome:local gene 604846 607149 3402 - . gene_id 0 ; sequence GL50803_2897-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 604846 607149 . - . utg11_pilon exonerate:protein2genome:local exon 604846 607149 . - . insertions 9 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 604846 607149 3402 - . alignment_id 0 ; Query GL50803_2897-t26_1-p1 ; Align 607150 10 198 ; Align 606943 76 2097 utg11_pilon exonerate:protein2genome:local gene 137432 137743 363 - . gene_id 0 ; sequence GL50803_28994-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 137432 137743 . - . utg11_pilon exonerate:protein2genome:local exon 137432 137743 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 137432 137743 363 - . alignment_id 0 ; Query GL50803_28994-t26_1-p1 ; Align 137744 1 312 utg47_pilon exonerate:protein2genome:local gene 2049498 2052194 3661 - . gene_id 0 ; sequence GL50803_2902-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2049498 2052194 . - . utg47_pilon exonerate:protein2genome:local exon 2049498 2052194 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2049498 2052194 3661 - . alignment_id 0 ; Query GL50803_2902-t26_1-p1 ; Align 2052195 1 2145 ; Align 2050050 717 552 utg731_pilon exonerate:protein2genome:local gene 786577 786873 406 + . gene_id 0 ; sequence GL50803_29031-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 786577 786873 . + . utg731_pilon exonerate:protein2genome:local exon 786577 786873 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 786577 786873 406 + . alignment_id 0 ; Query GL50803_29031-t26_1-p1 ; Align 786577 1 297 utg364_pilon exonerate:protein2genome:local gene 75740 75934 167 - . gene_id 0 ; sequence GL50803_29051-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 75740 75934 . - . utg364_pilon exonerate:protein2genome:local exon 75740 75934 . - . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 75740 75934 167 - . alignment_id 0 ; Query GL50803_29051-t26_1-p1 ; Align 75935 1 195 utg47_pilon exonerate:protein2genome:local gene 688350 690069 2301 + . gene_id 0 ; sequence GL50803_2906-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 688350 690069 . + . utg47_pilon exonerate:protein2genome:local exon 688350 690069 . + . insertions 0 ; deletions 4 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 688350 690069 2301 + . alignment_id 0 ; Query GL50803_2906-t26_1-p1 ; Align 688350 1 174 ; Align 688525 59 1359 ; Align 689884 516 186 utg47_pilon exonerate:protein2genome:local gene 424072 424245 230 + . gene_id 0 ; sequence GL50803_29061-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 424072 424245 . + . utg47_pilon exonerate:protein2genome:local exon 424072 424245 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 424072 424245 230 + . alignment_id 0 ; Query GL50803_29061-t26_1-p1 ; Align 424072 1 174 utg308_pilon exonerate:protein2genome:local gene 178312 178479 188 + . gene_id 0 ; sequence GL50803_29073-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 178312 178479 . + . utg308_pilon exonerate:protein2genome:local exon 178312 178479 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 178312 178479 188 + . alignment_id 0 ; Query GL50803_29073-t26_1-p1 ; Align 178312 1 168 utg308_pilon exonerate:protein2genome:local gene 162993 163889 1137 + . gene_id 0 ; sequence GL50803_29078-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 162993 163889 . + . utg308_pilon exonerate:protein2genome:local exon 162993 163889 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 162993 163889 1137 + . alignment_id 0 ; Query GL50803_29078-t26_1-p1 ; Align 162993 9 897 utg308_pilon exonerate:protein2genome:local gene 160512 160805 334 + . gene_id 0 ; sequence GL50803_29081-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 160512 160805 . + . utg308_pilon exonerate:protein2genome:local exon 160512 160805 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 160512 160805 334 + . alignment_id 0 ; Query GL50803_29081-t26_1-p1 ; Align 160512 51 294 utg64_pilon exonerate:protein2genome:local gene 709252 709632 513 + . gene_id 0 ; sequence GL50803_29106-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 709252 709632 . + . utg64_pilon exonerate:protein2genome:local exon 709252 709632 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 709252 709632 513 + . alignment_id 0 ; Query GL50803_29106-t26_1-p1 ; Align 709252 1 381 utg64_pilon exonerate:protein2genome:local gene 176003 176908 1268 - . gene_id 0 ; sequence GL50803_29119-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 176003 176908 . - . utg64_pilon exonerate:protein2genome:local exon 176003 176908 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 176003 176908 1268 - . alignment_id 0 ; Query GL50803_29119-t26_1-p1 ; Align 176909 1 906 utg64_pilon exonerate:protein2genome:local gene 164911 165132 306 - . gene_id 0 ; sequence GL50803_29121-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 164911 165132 . - . utg64_pilon exonerate:protein2genome:local exon 164911 165132 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 164911 165132 306 - . alignment_id 0 ; Query GL50803_29121-t26_1-p1 ; Align 165133 1 222 utg11_pilon exonerate:protein2genome:local gene 1182711 1183202 804 - . gene_id 0 ; sequence GL50803_29140-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1182711 1183202 . - . utg11_pilon exonerate:protein2genome:local exon 1182711 1183202 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1182711 1183202 804 - . alignment_id 0 ; Query GL50803_29140-t26_1-p1 ; Align 1183203 9 492 utg731_pilon exonerate:protein2genome:local gene 990728 991120 540 - . gene_id 0 ; sequence GL50803_29147-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 990728 991120 . - . utg731_pilon exonerate:protein2genome:local exon 990728 991120 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 990728 991120 540 - . alignment_id 0 ; Query GL50803_29147-t26_1-p1 ; Align 991121 1 393 utg99_pilon exonerate:protein2genome:local gene 423398 424540 1397 + . gene_id 0 ; sequence GL50803_29181-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 423398 424540 . + . utg99_pilon exonerate:protein2genome:local exon 423398 424540 . + . insertions 15 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 423398 424540 1397 + . alignment_id 0 ; Query GL50803_29181-t26_1-p1 ; Align 423398 1 942 ; Align 424352 315 24 ; Align 424379 323 162 utg47_pilon exonerate:protein2genome:local gene 142992 143873 1299 + . gene_id 0 ; sequence GL50803_29227-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 142992 143873 . + . utg47_pilon exonerate:protein2genome:local exon 142992 143873 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 142992 143873 1299 + . alignment_id 0 ; Query GL50803_29227-t26_1-p1 ; Align 142992 1 882 utg47_pilon exonerate:protein2genome:local gene 146890 147504 476 + . gene_id 0 ; sequence GL50803_29229-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 146890 147357 . + . utg47_pilon exonerate:protein2genome:local exon 146890 147357 . + . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local splice5 147358 147359 . + . intron_id 1 ; splice_site "CC" utg47_pilon exonerate:protein2genome:local intron 147358 147387 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 147386 147387 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 147388 147504 . + . utg47_pilon exonerate:protein2genome:local exon 147388 147504 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 146890 147504 476 + . alignment_id 0 ; Query GL50803_29229-t26_1-p1 ; Align 146890 1 249 ; Align 147139 87 84 ; Align 147223 116 135 ; Align 147388 161 18 ; Align 147406 169 99 utg11_pilon exonerate:protein2genome:local gene 732392 732989 820 - . gene_id 0 ; sequence GL50803_2925-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 732392 732989 . - . utg11_pilon exonerate:protein2genome:local exon 732392 732989 . - . insertions 0 ; deletions 2 ; frameshifts 4 utg11_pilon exonerate:protein2genome:local similarity 732392 732989 820 - . alignment_id 0 ; Query GL50803_2925-t26_1-p1 ; Align 732990 1 198 ; Align 732790 67 3 ; Align 732787 69 237 ; Align 732548 149 156 utg99_pilon exonerate:protein2genome:local gene 100251 100805 774 - . gene_id 0 ; sequence GL50803_29252-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 100251 100805 . - . utg99_pilon exonerate:protein2genome:local exon 100251 100805 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 100251 100805 774 - . alignment_id 0 ; Query GL50803_29252-t26_1-p1 ; Align 100806 21 555 utg99_pilon exonerate:protein2genome:local gene 104007 104126 108 + . gene_id 0 ; sequence GL50803_29254-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 104007 104126 . + . utg99_pilon exonerate:protein2genome:local exon 104007 104126 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 104007 104126 108 + . alignment_id 0 ; Query GL50803_29254-t26_1-p1 ; Align 104007 1 120 utg64_pilon exonerate:protein2genome:local gene 492437 492733 489 - . gene_id 0 ; sequence GL50803_29256-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 492437 492733 . - . utg64_pilon exonerate:protein2genome:local exon 492437 492733 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 492437 492733 489 - . alignment_id 0 ; Query GL50803_29256-t26_1-p1 ; Align 492734 1 297 utg11_pilon exonerate:protein2genome:local gene 731847 732347 588 + . gene_id 0 ; sequence GL50803_2926-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 731847 732347 . + . utg11_pilon exonerate:protein2genome:local exon 731847 732347 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 731847 732347 588 + . alignment_id 0 ; Query GL50803_2926-t26_1-p1 ; Align 731847 1 501 utg731_pilon exonerate:protein2genome:local gene 1167369 1167842 626 - . gene_id 0 ; sequence GL50803_29263-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1167369 1167842 . - . utg731_pilon exonerate:protein2genome:local exon 1167369 1167842 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1167369 1167842 626 - . alignment_id 0 ; Query GL50803_29263-t26_1-p1 ; Align 1167843 1 474 utg349_pilon exonerate:protein2genome:local gene 1130879 1131073 236 - . gene_id 0 ; sequence GL50803_29277-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1130879 1131073 . - . utg349_pilon exonerate:protein2genome:local exon 1130879 1131073 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1130879 1131073 236 - . alignment_id 0 ; Query GL50803_29277-t26_1-p1 ; Align 1131074 1 195 utg11_pilon exonerate:protein2genome:local gene 599908 600792 1214 - . gene_id 0 ; sequence GL50803_29304-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 599908 600792 . - . utg11_pilon exonerate:protein2genome:local exon 599908 600792 . - . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 599908 600792 1214 - . alignment_id 0 ; Query GL50803_29304-t26_1-p1 ; Align 600793 1 126 ; Align 600667 46 759 utg11_pilon exonerate:protein2genome:local gene 581202 582551 2150 - . gene_id 0 ; sequence GL50803_29307-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 581202 582551 . - . utg11_pilon exonerate:protein2genome:local exon 581202 582551 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 581202 582551 2150 - . alignment_id 0 ; Query GL50803_29307-t26_1-p1 ; Align 582552 1 1350 utg11_pilon exonerate:protein2genome:local gene 578303 578794 475 + . gene_id 0 ; sequence GL50803_29309-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 578303 578794 . + . utg11_pilon exonerate:protein2genome:local exon 578303 578794 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 578303 578794 475 + . alignment_id 0 ; Query GL50803_29309-t26_1-p1 ; Align 578303 1 492 utg47_pilon exonerate:protein2genome:local gene 1912523 1988226 110 - . gene_id 0 ; sequence GL50803_29316-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1988154 1988226 . - . utg47_pilon exonerate:protein2genome:local exon 1988154 1988226 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1988152 1988153 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1912775 1988153 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1912775 1912776 . - . intron_id 0 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 1912523 1912774 . - . utg47_pilon exonerate:protein2genome:local exon 1912523 1912774 . - . insertions 6 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1912523 1988226 110 - . alignment_id 0 ; Query GL50803_29316-t26_1-p1 ; Align 1988227 1 72 ; Align 1912773 26 75 ; Align 1912695 51 60 ; Align 1912634 71 57 ; Align 1912574 90 51 utg349_pilon exonerate:protein2genome:local gene 514949 515631 639 - . gene_id 0 ; sequence GL50803_29319-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 514949 515631 . - . utg349_pilon exonerate:protein2genome:local exon 514949 515631 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 514949 515631 639 - . alignment_id 0 ; Query GL50803_29319-t26_1-p1 ; Align 515632 1 645 ; Align 514985 216 36 utg64_pilon exonerate:protein2genome:local gene 448914 449519 907 + . gene_id 0 ; sequence GL50803_29327-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 448914 449519 . + . utg64_pilon exonerate:protein2genome:local exon 448914 449519 . + . insertions 6 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 448914 449519 907 + . alignment_id 0 ; Query GL50803_29327-t26_1-p1 ; Align 448914 1 522 ; Align 449442 175 78 utg349_pilon exonerate:protein2genome:local gene 1488662 1489201 913 + . gene_id 0 ; sequence GL50803_2933-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1488662 1489201 . + . utg349_pilon exonerate:protein2genome:local exon 1488662 1489201 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1488662 1489201 913 + . alignment_id 0 ; Query GL50803_2933-t26_1-p1 ; Align 1488662 1 540 utg99_pilon exonerate:protein2genome:local gene 505643 505912 249 - . gene_id 0 ; sequence GL50803_29342-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 505643 505912 . - . utg99_pilon exonerate:protein2genome:local exon 505643 505912 . - . insertions 0 ; deletions 5 utg99_pilon exonerate:protein2genome:local similarity 505643 505912 249 - . alignment_id 0 ; Query GL50803_29342-t26_1-p1 ; Align 505913 1 141 ; Align 505772 53 129 utg308_pilon exonerate:protein2genome:local gene 740251 740373 194 - . gene_id 0 ; sequence GL50803_29352-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 740251 740373 . - . utg308_pilon exonerate:protein2genome:local exon 740251 740373 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 740251 740373 194 - . alignment_id 0 ; Query GL50803_29352-t26_1-p1 ; Align 740374 1 123 utg308_pilon exonerate:protein2genome:local gene 745309 745842 671 - . gene_id 0 ; sequence GL50803_29353-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 745309 745842 . - . utg308_pilon exonerate:protein2genome:local exon 745309 745842 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 745309 745842 671 - . alignment_id 0 ; Query GL50803_29353-t26_1-p1 ; Align 745843 1 534 utg349_pilon exonerate:protein2genome:local gene 359513 361545 2356 - . gene_id 0 ; sequence GL50803_29359-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 359513 361545 . - . utg349_pilon exonerate:protein2genome:local exon 359513 361545 . - . insertions 0 ; deletions 6 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 359513 361545 2356 - . alignment_id 0 ; Query GL50803_29359-t26_1-p1 ; Align 361546 1 660 ; Align 360886 222 39 ; Align 360846 235 36 ; Align 360810 248 60 ; Align 360749 268 177 ; Align 360572 331 1059 utg731_pilon exonerate:protein2genome:local gene 825841 826302 627 + . gene_id 0 ; sequence GL50803_29387-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 825841 826302 . + . utg731_pilon exonerate:protein2genome:local exon 825841 826302 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 825841 826302 627 + . alignment_id 0 ; Query GL50803_29387-t26_1-p1 ; Align 825841 1 462 utg47_pilon exonerate:protein2genome:local gene 2211714 2211908 166 - . gene_id 0 ; sequence GL50803_294-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2211714 2211908 . - . utg47_pilon exonerate:protein2genome:local exon 2211714 2211908 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2211714 2211908 166 - . alignment_id 0 ; Query GL50803_294-t26_1-p1 ; Align 2211909 1 195 utg308_pilon exonerate:protein2genome:local gene 863130 863432 285 + . gene_id 0 ; sequence GL50803_29423-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 863130 863432 . + . utg308_pilon exonerate:protein2genome:local exon 863130 863432 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 863130 863432 285 + . alignment_id 0 ; Query GL50803_29423-t26_1-p1 ; Align 863130 1 303 utg308_pilon exonerate:protein2genome:local gene 862589 865414 3109 - . gene_id 0 ; sequence GL50803_29424-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 862589 865414 . - . utg308_pilon exonerate:protein2genome:local exon 862589 865414 . - . insertions 6 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 862589 865414 3109 - . alignment_id 0 ; Query GL50803_29424-t26_1-p1 ; Align 865415 1 618 ; Align 864794 207 786 ; Align 864005 469 1143 ; Align 862862 851 18 ; Align 862844 858 255 utg99_pilon exonerate:protein2genome:local gene 468554 472252 5593 - . gene_id 0 ; sequence GL50803_29436-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 468554 472252 . - . utg99_pilon exonerate:protein2genome:local exon 468554 472252 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 468554 472252 5593 - . alignment_id 0 ; Query GL50803_29436-t26_1-p1 ; Align 472253 1 3699 utg308_pilon exonerate:protein2genome:local gene 923084 923362 302 - . gene_id 0 ; sequence GL50803_29457-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 923084 923362 . - . utg308_pilon exonerate:protein2genome:local exon 923084 923362 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 923084 923362 302 - . alignment_id 0 ; Query GL50803_29457-t26_1-p1 ; Align 923363 1 279 utg47_pilon exonerate:protein2genome:local gene 99689 102526 2662 + . gene_id 0 ; sequence GL50803_2947-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 99689 102526 . + . utg47_pilon exonerate:protein2genome:local exon 99689 102526 . + . insertions 39 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 99689 102526 2662 + . alignment_id 0 ; Query GL50803_2947-t26_1-p1 ; Align 99689 1 714 ; Align 100403 240 285 ; Align 100691 335 60 ; Align 100763 355 312 ; Align 101081 459 60 ; Align 101153 479 9 ; Align 101165 482 474 ; Align 101642 640 309 ; Align 101951 744 576 utg11_pilon exonerate:protein2genome:local gene 649372 649491 159 - . gene_id 0 ; sequence GL50803_29474-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 649372 649491 . - . utg11_pilon exonerate:protein2genome:local exon 649372 649491 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 649372 649491 159 - . alignment_id 0 ; Query GL50803_29474-t26_1-p1 ; Align 649492 1 120 utg64_pilon exonerate:protein2genome:local gene 368841 368960 159 + . gene_id 0 ; sequence GL50803_29474-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 368841 368960 . + . utg64_pilon exonerate:protein2genome:local exon 368841 368960 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 368841 368960 159 + . alignment_id 0 ; Query GL50803_29474-t26_1-p1 ; Align 368841 1 120 utg64_pilon exonerate:protein2genome:local gene 357293 357412 159 - . gene_id 0 ; sequence GL50803_29474-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 357293 357412 . - . utg64_pilon exonerate:protein2genome:local exon 357293 357412 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 357293 357412 159 - . alignment_id 0 ; Query GL50803_29474-t26_1-p1 ; Align 357413 1 120 utg308_pilon exonerate:protein2genome:local gene 825856 825975 159 + . gene_id 0 ; sequence GL50803_29474-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 825856 825975 . + . utg308_pilon exonerate:protein2genome:local exon 825856 825975 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 825856 825975 159 + . alignment_id 0 ; Query GL50803_29474-t26_1-p1 ; Align 825856 1 120 utg349_pilon exonerate:protein2genome:local gene 1439557 1439676 159 - . gene_id 0 ; sequence GL50803_29474-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1439557 1439676 . - . utg349_pilon exonerate:protein2genome:local exon 1439557 1439676 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1439557 1439676 159 - . alignment_id 0 ; Query GL50803_29474-t26_1-p1 ; Align 1439677 1 120 utg731_pilon exonerate:protein2genome:local gene 68705 68824 159 + . gene_id 0 ; sequence GL50803_29474-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 68705 68824 . + . utg731_pilon exonerate:protein2genome:local exon 68705 68824 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 68705 68824 159 + . alignment_id 0 ; Query GL50803_29474-t26_1-p1 ; Align 68705 1 120 utg1966_pilon exonerate:protein2genome:local gene 189403 189522 159 + . gene_id 0 ; sequence GL50803_29474-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 189403 189522 . + . utg1966_pilon exonerate:protein2genome:local exon 189403 189522 . + . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 189403 189522 159 + . alignment_id 0 ; Query GL50803_29474-t26_1-p1 ; Align 189403 1 120 utg11_pilon exonerate:protein2genome:local gene 317638 317814 210 - . gene_id 0 ; sequence GL50803_29481-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 317638 317814 . - . utg11_pilon exonerate:protein2genome:local exon 317638 317814 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 317638 317814 210 - . alignment_id 0 ; Query GL50803_29481-t26_1-p1 ; Align 317815 1 177 utg11_pilon exonerate:protein2genome:local gene 349965 350426 543 + . gene_id 0 ; sequence GL50803_29485-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 349965 350426 . + . utg11_pilon exonerate:protein2genome:local exon 349965 350426 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 349965 350426 543 + . alignment_id 0 ; Query GL50803_29485-t26_1-p1 ; Align 349965 2 462 utg11_pilon exonerate:protein2genome:local gene 350424 351197 1041 - . gene_id 0 ; sequence GL50803_29486-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 350424 351197 . - . utg11_pilon exonerate:protein2genome:local exon 350424 351197 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 350424 351197 1041 - . alignment_id 0 ; Query GL50803_29486-t26_1-p1 ; Align 351198 1 774 utg11_pilon exonerate:protein2genome:local gene 351252 351955 1040 - . gene_id 0 ; sequence GL50803_29487-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 351252 351955 . - . utg11_pilon exonerate:protein2genome:local exon 351252 351955 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 351252 351955 1040 - . alignment_id 0 ; Query GL50803_29487-t26_1-p1 ; Align 351956 1 225 ; Align 351730 76 39 ; Align 351690 89 438 utg349_pilon exonerate:protein2genome:local gene 1399897 1400685 1261 + . gene_id 0 ; sequence GL50803_29490-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1399897 1400685 . + . utg349_pilon exonerate:protein2genome:local exon 1399897 1400685 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1399897 1400685 1261 + . alignment_id 0 ; Query GL50803_29490-t26_1-p1 ; Align 1399897 1 789 utg349_pilon exonerate:protein2genome:local gene 1355965 1356270 317 + . gene_id 0 ; sequence GL50803_29500-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1355965 1356270 . + . utg349_pilon exonerate:protein2genome:local exon 1355965 1356270 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1355965 1356270 317 + . alignment_id 0 ; Query GL50803_29500-t26_1-p1 ; Align 1355965 1 306 utg11_pilon exonerate:protein2genome:local gene 1667799 1668026 231 - . gene_id 0 ; sequence GL50803_29504-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1667799 1668026 . - . utg11_pilon exonerate:protein2genome:local exon 1667799 1668026 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1667799 1668026 231 - . alignment_id 0 ; Query GL50803_29504-t26_1-p1 ; Align 1668027 1 228 utg47_pilon exonerate:protein2genome:local gene 1522182 1522430 338 + . gene_id 0 ; sequence GL50803_29525-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1522182 1522430 . + . utg47_pilon exonerate:protein2genome:local exon 1522182 1522430 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1522182 1522430 338 + . alignment_id 0 ; Query GL50803_29525-t26_1-p1 ; Align 1522182 1 249 utg731_pilon exonerate:protein2genome:local gene 1038687 1038836 133 - . gene_id 0 ; sequence GL50803_29555-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1038687 1038836 . - . utg731_pilon exonerate:protein2genome:local exon 1038687 1038836 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1038687 1038836 133 - . alignment_id 0 ; Query GL50803_29555-t26_1-p1 ; Align 1038837 6 150 utg308_pilon exonerate:protein2genome:local gene 277369 277867 369 + . gene_id 0 ; sequence GL50803_29582-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 277369 277867 . + . utg308_pilon exonerate:protein2genome:local exon 277369 277867 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 277369 277867 369 + . alignment_id 0 ; Query GL50803_29582-t26_1-p1 ; Align 277369 1 276 ; Align 277646 93 222 utg18_pilon exonerate:protein2genome:local gene 412689 412973 315 + . gene_id 0 ; sequence GL50803_29595-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 412689 412973 . + . utg18_pilon exonerate:protein2genome:local exon 412689 412973 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 412689 412973 315 + . alignment_id 0 ; Query GL50803_29595-t26_1-p1 ; Align 412689 1 285 utg349_pilon exonerate:protein2genome:local gene 898329 898667 339 - . gene_id 0 ; sequence GL50803_29619-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 898329 898667 . - . utg349_pilon exonerate:protein2genome:local exon 898329 898667 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 898329 898667 339 - . alignment_id 0 ; Query GL50803_29619-t26_1-p1 ; Align 898668 3 339 utg349_pilon exonerate:protein2genome:local gene 1264727 1265065 462 + . gene_id 0 ; sequence GL50803_29630-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1264727 1265065 . + . utg349_pilon exonerate:protein2genome:local exon 1264727 1265065 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1264727 1265065 462 + . alignment_id 0 ; Query GL50803_29630-t26_1-p1 ; Align 1264727 1 339 utg349_pilon exonerate:protein2genome:local gene 1406485 1407048 870 + . gene_id 0 ; sequence GL50803_2964-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1406485 1407048 . + . utg349_pilon exonerate:protein2genome:local exon 1406485 1407048 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1406485 1407048 870 + . alignment_id 0 ; Query GL50803_2964-t26_1-p1 ; Align 1406485 1 546 ; Align 1407031 184 18 utg212_pilon exonerate:protein2genome:local gene 518994 519089 103 + . gene_id 0 ; sequence GL50803_29646-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 518994 519089 . + . utg212_pilon exonerate:protein2genome:local exon 518994 519089 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 518994 519089 103 + . alignment_id 0 ; Query GL50803_29646-t26_1-p1 ; Align 518994 1 96 utg212_pilon exonerate:protein2genome:local gene 607154 607255 103 + . gene_id 0 ; sequence GL50803_29646-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 607154 607255 . + . utg212_pilon exonerate:protein2genome:local exon 607154 607255 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 607154 607255 103 + . alignment_id 0 ; Query GL50803_29646-t26_1-p1 ; Align 607154 1 102 utg212_pilon exonerate:protein2genome:local gene 596234 596335 103 - . gene_id 0 ; sequence GL50803_29646-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 596234 596335 . - . utg212_pilon exonerate:protein2genome:local exon 596234 596335 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 596234 596335 103 - . alignment_id 0 ; Query GL50803_29646-t26_1-p1 ; Align 596336 1 102 utg731_pilon exonerate:protein2genome:local gene 879498 879887 291 - . gene_id 0 ; sequence GL50803_29682-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 879498 879887 . - . utg731_pilon exonerate:protein2genome:local exon 879498 879887 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 879498 879887 291 - . alignment_id 0 ; Query GL50803_29682-t26_1-p1 ; Align 879888 1 390 utg308_pilon exonerate:protein2genome:local gene 75107 75973 1211 - . gene_id 0 ; sequence GL50803_2969-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 75107 75973 . - . utg308_pilon exonerate:protein2genome:local exon 75107 75973 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 75107 75973 1211 - . alignment_id 0 ; Query GL50803_2969-t26_1-p1 ; Align 75974 1 867 utg731_pilon exonerate:protein2genome:local gene 918040 918426 461 - . gene_id 0 ; sequence GL50803_29692-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 918040 918426 . - . utg731_pilon exonerate:protein2genome:local exon 918040 918426 . - . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 918040 918426 461 - . alignment_id 0 ; Query GL50803_29692-t26_1-p1 ; Align 918427 1 276 ; Align 918151 96 111 utg308_pilon exonerate:protein2genome:local gene 73661 75094 2463 + . gene_id 0 ; sequence GL50803_2970-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 73661 75094 . + . utg308_pilon exonerate:protein2genome:local exon 73661 75094 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 73661 75094 2463 + . alignment_id 0 ; Query GL50803_2970-t26_1-p1 ; Align 73661 1 1434 utg11_pilon exonerate:protein2genome:local gene 931259 931393 169 - . gene_id 0 ; sequence GL50803_29700-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 931259 931393 . - . utg11_pilon exonerate:protein2genome:local exon 931259 931393 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 931259 931393 169 - . alignment_id 0 ; Query GL50803_29700-t26_1-p1 ; Align 931394 1 135 utg11_pilon exonerate:protein2genome:local gene 1429523 1429675 198 - . gene_id 0 ; sequence GL50803_29702-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1429523 1429675 . - . utg11_pilon exonerate:protein2genome:local exon 1429523 1429675 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1429523 1429675 198 - . alignment_id 0 ; Query GL50803_29702-t26_1-p1 ; Align 1429676 1 153 utg11_pilon exonerate:protein2genome:local gene 952012 952356 510 + . gene_id 0 ; sequence GL50803_29708-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 952012 952356 . + . utg11_pilon exonerate:protein2genome:local exon 952012 952356 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 952012 952356 510 + . alignment_id 0 ; Query GL50803_29708-t26_1-p1 ; Align 952012 1 345 utg308_pilon exonerate:protein2genome:local gene 71450 72193 804 + . gene_id 0 ; sequence GL50803_2972-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 71450 72193 . + . utg308_pilon exonerate:protein2genome:local exon 71450 72193 . + . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 71450 72193 804 + . alignment_id 0 ; Query GL50803_2972-t26_1-p1 ; Align 71450 9 261 ; Align 71711 98 483 utg64_pilon exonerate:protein2genome:local gene 585280 585408 129 - . gene_id 0 ; sequence GL50803_29725-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 585280 585408 . - . utg64_pilon exonerate:protein2genome:local exon 585280 585408 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 585280 585408 129 - . alignment_id 0 ; Query GL50803_29725-t26_1-p1 ; Align 585409 10 129 utg308_pilon exonerate:protein2genome:local gene 71028 71246 290 + . gene_id 0 ; sequence GL50803_2973-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 71028 71246 . + . utg308_pilon exonerate:protein2genome:local exon 71028 71246 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 71028 71246 290 + . alignment_id 0 ; Query GL50803_2973-t26_1-p1 ; Align 71028 1 219 utg265_pilon exonerate:protein2genome:local gene 887400 887612 231 - . gene_id 0 ; sequence GL50803_29744-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 887400 887612 . - . utg265_pilon exonerate:protein2genome:local exon 887400 887612 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 887400 887612 231 - . alignment_id 0 ; Query GL50803_29744-t26_1-p1 ; Align 887613 1 213 utg47_pilon exonerate:protein2genome:local gene 183839 184198 253 + . gene_id 0 ; sequence GL50803_29768-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 183839 184198 . + . utg47_pilon exonerate:protein2genome:local exon 183839 184198 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 183839 184198 253 + . alignment_id 0 ; Query GL50803_29768-t26_1-p1 ; Align 183839 1 360 utg731_pilon exonerate:protein2genome:local gene 1363458 1365782 3258 - . gene_id 0 ; sequence GL50803_29772-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1363458 1365782 . - . utg731_pilon exonerate:protein2genome:local exon 1363458 1365782 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1363458 1365782 3258 - . alignment_id 0 ; Query GL50803_29772-t26_1-p1 ; Align 1365783 1 2325 utg731_pilon exonerate:protein2genome:local gene 45567 46475 1033 - . gene_id 0 ; sequence GL50803_29774-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 45567 46475 . - . utg731_pilon exonerate:protein2genome:local exon 45567 46475 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 45567 46475 1033 - . alignment_id 0 ; Query GL50803_29774-t26_1-p1 ; Align 46476 7 909 utg308_pilon exonerate:protein2genome:local gene 504992 506082 1692 + . gene_id 0 ; sequence GL50803_29796-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 504992 506082 . + . utg308_pilon exonerate:protein2genome:local exon 504992 506082 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 504992 506082 1692 + . alignment_id 0 ; Query GL50803_29796-t26_1-p1 ; Align 504992 1 162 ; Align 505156 56 927 utg349_pilon exonerate:protein2genome:local gene 893526 894260 1152 - . gene_id 0 ; sequence GL50803_2980-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 893526 894260 . - . utg349_pilon exonerate:protein2genome:local exon 893526 894260 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 893526 894260 1152 - . alignment_id 0 ; Query GL50803_2980-t26_1-p1 ; Align 894261 1 735 utg64_pilon exonerate:protein2genome:local gene 686843 687154 416 - . gene_id 0 ; sequence GL50803_300001-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 686843 687154 . - . utg64_pilon exonerate:protein2genome:local exon 686843 687154 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 686843 687154 416 - . alignment_id 0 ; Query GL50803_300001-t26_1-p1 ; Align 687155 1 312 utg11_pilon exonerate:protein2genome:local gene 1716550 1717578 1338 - . gene_id 0 ; sequence GL50803_3007-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1716550 1717578 . - . utg11_pilon exonerate:protein2genome:local exon 1716550 1717578 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1716550 1717578 1338 - . alignment_id 0 ; Query GL50803_3007-t26_1-p1 ; Align 1717579 202 1029 utg11_pilon exonerate:protein2genome:local gene 1640649 1641569 1456 - . gene_id 0 ; sequence GL50803_3021-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1640649 1641569 . - . utg11_pilon exonerate:protein2genome:local exon 1640649 1641569 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1640649 1641569 1456 - . alignment_id 0 ; Query GL50803_3021-t26_1-p1 ; Align 1641570 1 921 utg18_pilon exonerate:protein2genome:local gene 290850 305204 18870 + . gene_id 0 ; sequence GL50803_30233-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 290850 305204 . + . utg18_pilon exonerate:protein2genome:local exon 290850 305204 . + . insertions 0 ; deletions 6 utg18_pilon exonerate:protein2genome:local similarity 290850 305204 18870 + . alignment_id 0 ; Query GL50803_30233-t26_1-p1 ; Align 290850 1 1176 ; Align 292026 394 1398 ; Align 293424 863 8856 ; Align 302280 3816 2022 ; Align 304302 4491 903 utg349_pilon exonerate:protein2genome:local gene 1336624 1337895 1861 - . gene_id 0 ; sequence GL50803_3032-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1336624 1337895 . - . utg349_pilon exonerate:protein2genome:local exon 1336624 1337895 . - . insertions 0 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 1336624 1337895 1861 - . alignment_id 0 ; Query GL50803_3032-t26_1-p1 ; Align 1337896 1 651 ; Align 1337245 223 621 utg349_pilon exonerate:protein2genome:local gene 1218821 1698121 1237 - . gene_id 0 ; sequence GL50803_30354-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1698040 1698121 . - . utg349_pilon exonerate:protein2genome:local exon 1698040 1698121 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1698038 1698039 . - . intron_id 1 ; splice_site "TT" utg349_pilon exonerate:protein2genome:local intron 1529334 1698039 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1529334 1529335 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1528464 1529333 . - . utg349_pilon exonerate:protein2genome:local exon 1528464 1529333 . - . insertions 15 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1528462 1528463 . - . intron_id 2 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 1386753 1528463 . - . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1386753 1386754 . - . intron_id 1 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local cds 1386705 1386752 . - . utg349_pilon exonerate:protein2genome:local exon 1386705 1386752 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1386703 1386704 . - . intron_id 3 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1317263 1386704 . - . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 1317263 1317264 . - . intron_id 2 ; splice_site "CA" utg349_pilon exonerate:protein2genome:local cds 1317009 1317262 . - . utg349_pilon exonerate:protein2genome:local exon 1317009 1317262 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1317007 1317008 . - . intron_id 4 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 1219669 1317008 . - . intron_id 4 utg349_pilon exonerate:protein2genome:local splice3 1219669 1219670 . - . intron_id 3 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1218821 1219668 . - . utg349_pilon exonerate:protein2genome:local exon 1218821 1219668 . - . insertions 0 ; deletions 2 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 1218821 1698121 1237 - . alignment_id 0 ; Query GL50803_30354-t26_1-p1 ; Align 1698122 9 36 ; Align 1698083 21 42 ; Align 1529332 36 399 ; Align 1528930 169 33 ; Align 1528888 180 72 ; Align 1528813 204 348 ; Align 1386751 321 12 ; Align 1386736 325 30 ; Align 1317261 336 252 ; Align 1219669 420 354 ; Align 1219315 540 18 ; Align 1219295 546 474 utg349_pilon exonerate:protein2genome:local gene 1334498 1334890 631 + . gene_id 0 ; sequence GL50803_3036-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1334498 1334890 . + . utg349_pilon exonerate:protein2genome:local exon 1334498 1334890 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1334498 1334890 631 + . alignment_id 0 ; Query GL50803_3036-t26_1-p1 ; Align 1334498 1 393 utg731_pilon exonerate:protein2genome:local gene 1459210 1460910 2639 + . gene_id 0 ; sequence GL50803_3042-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1459210 1460910 . + . utg731_pilon exonerate:protein2genome:local exon 1459210 1460910 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1459210 1460910 2639 + . alignment_id 0 ; Query GL50803_3042-t26_1-p1 ; Align 1459210 1 1701 utg47_pilon exonerate:protein2genome:local gene 1642305 1643267 1485 + . gene_id 0 ; sequence GL50803_30448-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1642305 1643267 . + . utg47_pilon exonerate:protein2genome:local exon 1642305 1643267 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1642305 1643267 1485 + . alignment_id 0 ; Query GL50803_30448-t26_1-p1 ; Align 1642305 1 906 ; Align 1643214 303 54 utg64_pilon exonerate:protein2genome:local gene 344371 346377 2578 - . gene_id 0 ; sequence GL50803_30474-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 344371 346377 . - . utg64_pilon exonerate:protein2genome:local exon 344371 346377 . - . insertions 0 ; deletions 8 utg64_pilon exonerate:protein2genome:local similarity 344371 346377 2578 - . alignment_id 0 ; Query GL50803_30474-t26_1-p1 ; Align 346378 1 1308 ; Align 345070 438 192 ; Align 344878 505 321 ; Align 344557 616 186 utg47_pilon exonerate:protein2genome:local gene 137670 140081 3640 + . gene_id 0 ; sequence GL50803_30476-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 137670 140081 . + . utg47_pilon exonerate:protein2genome:local exon 137670 140081 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 137670 140081 3640 + . alignment_id 0 ; Query GL50803_30476-t26_1-p1 ; Align 137670 1 2412 utg212_pilon exonerate:protein2genome:local gene 287459 288935 1792 + . gene_id 0 ; sequence GL50803_3062-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 287459 288935 . + . utg212_pilon exonerate:protein2genome:local exon 287459 288935 . + . insertions 0 ; deletions 4 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 287459 288935 1792 + . alignment_id 0 ; Query GL50803_3062-t26_1-p1 ; Align 287459 11 381 ; Align 287840 141 99 ; Align 287940 174 3 ; Align 287943 176 993 utg212_pilon exonerate:protein2genome:local gene 286214 287371 1725 + . gene_id 0 ; sequence GL50803_3063-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 286214 287371 . + . utg212_pilon exonerate:protein2genome:local exon 286214 287371 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 286214 287371 1725 + . alignment_id 0 ; Query GL50803_3063-t26_1-p1 ; Align 286214 1 1158 utg47_pilon exonerate:protein2genome:local gene 2239144 2239413 260 + . gene_id 0 ; sequence GL50803_30645-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2239144 2239413 . + . utg47_pilon exonerate:protein2genome:local exon 2239144 2239413 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2239144 2239413 260 + . alignment_id 0 ; Query GL50803_30645-t26_1-p1 ; Align 2239144 1 270 utg731_pilon exonerate:protein2genome:local gene 1320932 1321060 126 - . gene_id 0 ; sequence GL50803_3072-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1320932 1321060 . - . utg731_pilon exonerate:protein2genome:local exon 1320932 1321060 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1320932 1321060 126 - . alignment_id 0 ; Query GL50803_3072-t26_1-p1 ; Align 1321061 1 129 utg731_pilon exonerate:protein2genome:local gene 1320828 1321325 636 + . gene_id 0 ; sequence GL50803_3073-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1320828 1321325 . + . utg731_pilon exonerate:protein2genome:local exon 1320828 1321325 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1320828 1321325 636 + . alignment_id 0 ; Query GL50803_3073-t26_1-p1 ; Align 1320828 1 498 utg731_pilon exonerate:protein2genome:local gene 1343568 1426167 303 - . gene_id 0 ; sequence GL50803_30764-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1426025 1426167 . - . utg731_pilon exonerate:protein2genome:local exon 1426025 1426167 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1426023 1426024 . - . intron_id 1 ; splice_site "GC" utg731_pilon exonerate:protein2genome:local intron 1343758 1426024 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1343758 1343759 . - . intron_id 0 ; splice_site "GG" utg731_pilon exonerate:protein2genome:local cds 1343568 1343757 . - . utg731_pilon exonerate:protein2genome:local exon 1343568 1343757 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1343568 1426167 303 - . alignment_id 0 ; Query GL50803_30764-t26_1-p1 ; Align 1426168 1 141 ; Align 1343757 49 189 utg47_pilon exonerate:protein2genome:local gene 250478 251476 1199 - . gene_id 0 ; sequence GL50803_3079-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 250478 251476 . - . utg47_pilon exonerate:protein2genome:local exon 250478 251476 . - . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 250478 251476 1199 - . alignment_id 0 ; Query GL50803_3079-t26_1-p1 ; Align 251477 1 696 ; Align 250775 233 297 utg731_pilon exonerate:protein2genome:local gene 649512 649699 213 - . gene_id 0 ; sequence GL50803_30795-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 649512 649699 . - . utg731_pilon exonerate:protein2genome:local exon 649512 649699 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 649512 649699 213 - . alignment_id 0 ; Query GL50803_30795-t26_1-p1 ; Align 649700 1 84 ; Align 649614 30 102 utg47_pilon exonerate:protein2genome:local gene 1344341 1344685 299 - . gene_id 0 ; sequence GL50803_30819-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1344341 1344685 . - . utg47_pilon exonerate:protein2genome:local exon 1344341 1344685 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1344341 1344685 299 - . alignment_id 0 ; Query GL50803_30819-t26_1-p1 ; Align 1344686 1 345 utg18_pilon exonerate:protein2genome:local gene 561373 575769 193 + . gene_id 0 ; sequence GL50803_30848-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 561373 561489 . + . utg18_pilon exonerate:protein2genome:local exon 561373 561489 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 561490 561491 . + . intron_id 1 ; splice_site "GC" utg18_pilon exonerate:protein2genome:local intron 561490 575601 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 575600 575601 . + . intron_id 0 ; splice_site "CG" utg18_pilon exonerate:protein2genome:local cds 575602 575769 . + . utg18_pilon exonerate:protein2genome:local exon 575602 575769 . + . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 561373 575769 193 + . alignment_id 0 ; Query GL50803_30848-t26_1-p1 ; Align 561373 2 117 ; Align 575602 41 30 ; Align 575632 53 138 utg99_pilon exonerate:protein2genome:local gene 404774 405016 375 - . gene_id 0 ; sequence GL50803_30851-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 404774 405016 . - . utg99_pilon exonerate:protein2genome:local exon 404774 405016 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 404774 405016 375 - . alignment_id 0 ; Query GL50803_30851-t26_1-p1 ; Align 405017 1 243 utg99_pilon exonerate:protein2genome:local gene 404835 405017 233 + . gene_id 0 ; sequence GL50803_30852-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 404835 405017 . + . utg99_pilon exonerate:protein2genome:local exon 404835 405017 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 404835 405017 233 + . alignment_id 0 ; Query GL50803_30852-t26_1-p1 ; Align 404835 1 183 utg64_pilon exonerate:protein2genome:local gene 152331 152531 194 - . gene_id 0 ; sequence GL50803_30938-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 152331 152531 . - . utg64_pilon exonerate:protein2genome:local exon 152331 152531 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 152331 152531 194 - . alignment_id 0 ; Query GL50803_30938-t26_1-p1 ; Align 152532 26 201 utg349_pilon exonerate:protein2genome:local gene 890825 891127 343 + . gene_id 0 ; sequence GL50803_30947-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 890825 891127 . + . utg349_pilon exonerate:protein2genome:local exon 890825 891127 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 890825 891127 343 + . alignment_id 0 ; Query GL50803_30947-t26_1-p1 ; Align 890825 3 303 utg731_pilon exonerate:protein2genome:local gene 1512568 1513062 782 + . gene_id 0 ; sequence GL50803_3095-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1512568 1513062 . + . utg731_pilon exonerate:protein2genome:local exon 1512568 1513062 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1512568 1513062 782 + . alignment_id 0 ; Query GL50803_3095-t26_1-p1 ; Align 1512568 1 495 utg731_pilon exonerate:protein2genome:local gene 1514762 1515898 1414 + . gene_id 0 ; sequence GL50803_3098-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1514762 1515898 . + . utg731_pilon exonerate:protein2genome:local exon 1514762 1515898 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1514762 1515898 1414 + . alignment_id 0 ; Query GL50803_3098-t26_1-p1 ; Align 1514762 2 1137 utg731_pilon exonerate:protein2genome:local gene 1515945 1517225 1567 + . gene_id 0 ; sequence GL50803_3099-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1515945 1517225 . + . utg731_pilon exonerate:protein2genome:local exon 1515945 1517225 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1515945 1517225 1567 + . alignment_id 0 ; Query GL50803_3099-t26_1-p1 ; Align 1515945 1 1104 ; Align 1517049 371 177 utg212_pilon exonerate:protein2genome:local gene 44758 45225 551 - . gene_id 0 ; sequence GL50803_31017-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 44758 45225 . - . utg212_pilon exonerate:protein2genome:local exon 44758 45225 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 44758 45225 551 - . alignment_id 0 ; Query GL50803_31017-t26_1-p1 ; Align 45226 1 468 utg212_pilon exonerate:protein2genome:local gene 440273 440401 129 + . gene_id 0 ; sequence GL50803_31021-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 440273 440401 . + . utg212_pilon exonerate:protein2genome:local exon 440273 440401 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 440273 440401 129 + . alignment_id 0 ; Query GL50803_31021-t26_1-p1 ; Align 440273 50 129 utg212_pilon exonerate:protein2genome:local gene 438882 439127 339 - . gene_id 0 ; sequence GL50803_31022-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 438882 439127 . - . utg212_pilon exonerate:protein2genome:local exon 438882 439127 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 438882 439127 339 - . alignment_id 0 ; Query GL50803_31022-t26_1-p1 ; Align 439128 1 246 utg18_pilon exonerate:protein2genome:local gene 144715 144933 231 + . gene_id 0 ; sequence GL50803_31031-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 144715 144933 . + . utg18_pilon exonerate:protein2genome:local exon 144715 144933 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 144715 144933 231 + . alignment_id 0 ; Query GL50803_31031-t26_1-p1 ; Align 144715 2 219 utg265_pilon exonerate:protein2genome:local gene 690683 690808 135 - . gene_id 0 ; sequence GL50803_31094-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 690683 690808 . - . utg265_pilon exonerate:protein2genome:local exon 690683 690808 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 690683 690808 135 - . alignment_id 0 ; Query GL50803_31094-t26_1-p1 ; Align 690809 34 126 utg265_pilon exonerate:protein2genome:local gene 700411 700524 162 + . gene_id 0 ; sequence GL50803_31095-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 700411 700524 . + . utg265_pilon exonerate:protein2genome:local exon 700411 700524 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 700411 700524 162 + . alignment_id 0 ; Query GL50803_31095-t26_1-p1 ; Align 700411 41 114 utg265_pilon exonerate:protein2genome:local gene 700431 700520 137 - . gene_id 0 ; sequence GL50803_31096-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 700431 700520 . - . utg265_pilon exonerate:protein2genome:local exon 700431 700520 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 700431 700520 137 - . alignment_id 0 ; Query GL50803_31096-t26_1-p1 ; Align 700521 1 90 utg64_pilon exonerate:protein2genome:local gene 661270 661455 195 - . gene_id 0 ; sequence GL50803_31107-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 661270 661455 . - . utg64_pilon exonerate:protein2genome:local exon 661270 661455 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 661270 661455 195 - . alignment_id 0 ; Query GL50803_31107-t26_1-p1 ; Align 661456 13 75 ; Align 661378 38 108 utg349_pilon exonerate:protein2genome:local gene 375323 375670 456 - . gene_id 0 ; sequence GL50803_31113-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 375323 375670 . - . utg349_pilon exonerate:protein2genome:local exon 375323 375670 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 375323 375670 456 - . alignment_id 0 ; Query GL50803_31113-t26_1-p1 ; Align 375671 1 348 utg731_pilon exonerate:protein2genome:local gene 205866 206033 176 + . gene_id 0 ; sequence GL50803_31116-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 205866 206033 . + . utg731_pilon exonerate:protein2genome:local exon 205866 206033 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 205866 206033 176 + . alignment_id 0 ; Query GL50803_31116-t26_1-p1 ; Align 205866 1 168 utg64_pilon exonerate:protein2genome:local gene 103861 104337 739 + . gene_id 0 ; sequence GL50803_3114-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 103861 104337 . + . utg64_pilon exonerate:protein2genome:local exon 103861 104337 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 103861 104337 739 + . alignment_id 0 ; Query GL50803_3114-t26_1-p1 ; Align 103861 1 477 utg18_pilon exonerate:protein2genome:local gene 71946 72500 581 + . gene_id 0 ; sequence GL50803_31144-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 71946 72500 . + . utg18_pilon exonerate:protein2genome:local exon 71946 72500 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 71946 72500 581 + . alignment_id 0 ; Query GL50803_31144-t26_1-p1 ; Align 71946 1 555 utg731_pilon exonerate:protein2genome:local gene 124243 124338 101 - . gene_id 0 ; sequence GL50803_31153-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 124243 124338 . - . utg731_pilon exonerate:protein2genome:local exon 124243 124338 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 124243 124338 101 - . alignment_id 0 ; Query GL50803_31153-t26_1-p1 ; Align 124339 1 54 ; Align 124285 20 42 utg64_pilon exonerate:protein2genome:local gene 625082 625357 224 + . gene_id 0 ; sequence GL50803_31159-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 625082 625357 . + . utg64_pilon exonerate:protein2genome:local exon 625082 625357 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 625082 625357 224 + . alignment_id 0 ; Query GL50803_31159-t26_1-p1 ; Align 625082 1 210 ; Align 625295 71 63 utg64_pilon exonerate:protein2genome:local gene 104453 105070 796 + . gene_id 0 ; sequence GL50803_3116-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 104453 105070 . + . utg64_pilon exonerate:protein2genome:local exon 104453 105070 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 104453 105070 796 + . alignment_id 0 ; Query GL50803_3116-t26_1-p1 ; Align 104453 1 618 utg308_pilon exonerate:protein2genome:local gene 790108 825632 113 - . gene_id 0 ; sequence GL50803_31167-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 825573 825632 . - . utg308_pilon exonerate:protein2genome:local exon 825573 825632 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 825571 825572 . - . intron_id 1 ; splice_site "AT" utg308_pilon exonerate:protein2genome:local intron 821308 825572 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 821308 821309 . - . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 821274 821307 . - . utg308_pilon exonerate:protein2genome:local exon 821274 821307 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 821272 821273 . - . intron_id 2 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 790134 821273 . - . intron_id 2 utg308_pilon exonerate:protein2genome:local splice3 790134 790135 . - . intron_id 1 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 790108 790133 . - . utg308_pilon exonerate:protein2genome:local exon 790108 790133 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 790108 825632 113 - . alignment_id 0 ; Query GL50803_31167-t26_1-p1 ; Align 825633 1 60 ; Align 821308 21 33 ; Align 790132 33 24 utg64_pilon exonerate:protein2genome:local gene 105087 107852 3915 + . gene_id 0 ; sequence GL50803_3117-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 105087 107852 . + . utg64_pilon exonerate:protein2genome:local exon 105087 107852 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 105087 107852 3915 + . alignment_id 0 ; Query GL50803_3117-t26_1-p1 ; Align 105087 1 2214 ; Align 107301 740 552 utg99_pilon exonerate:protein2genome:local gene 351504 351650 129 - . gene_id 0 ; sequence GL50803_31170-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 351504 351650 . - . utg99_pilon exonerate:protein2genome:local exon 351504 351650 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 351504 351650 129 - . alignment_id 0 ; Query GL50803_31170-t26_1-p1 ; Align 351651 58 147 utg11_pilon exonerate:protein2genome:local gene 837851 838203 312 - . gene_id 0 ; sequence GL50803_31183-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 837851 838203 . - . utg11_pilon exonerate:protein2genome:local exon 837851 838203 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 837851 838203 312 - . alignment_id 0 ; Query GL50803_31183-t26_1-p1 ; Align 838204 2 111 ; Align 838091 40 240 utg731_pilon exonerate:protein2genome:local gene 479688 480005 354 - . gene_id 0 ; sequence GL50803_31185-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 479688 480005 . - . utg731_pilon exonerate:protein2genome:local exon 479688 480005 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 479688 480005 354 - . alignment_id 0 ; Query GL50803_31185-t26_1-p1 ; Align 480006 1 141 ; Align 479865 49 177 utg64_pilon exonerate:protein2genome:local gene 598952 599191 136 + . gene_id 0 ; sequence GL50803_31187-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 598952 599191 . + . utg64_pilon exonerate:protein2genome:local exon 598952 599191 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 598952 599191 136 + . alignment_id 0 ; Query GL50803_31187-t26_1-p1 ; Align 598952 27 240 utg18_pilon exonerate:protein2genome:local gene 371864 372010 144 + . gene_id 0 ; sequence GL50803_31189-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 371864 372010 . + . utg18_pilon exonerate:protein2genome:local exon 371864 372010 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 371864 372010 144 + . alignment_id 0 ; Query GL50803_31189-t26_1-p1 ; Align 371864 1 147 utg18_pilon exonerate:protein2genome:local gene 376513 376965 643 - . gene_id 0 ; sequence GL50803_31191-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 376513 376965 . - . utg18_pilon exonerate:protein2genome:local exon 376513 376965 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 376513 376965 643 - . alignment_id 0 ; Query GL50803_31191-t26_1-p1 ; Align 376966 1 453 utg99_pilon exonerate:protein2genome:local gene 346850 347047 190 + . gene_id 0 ; sequence GL50803_31203-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 346850 347047 . + . utg99_pilon exonerate:protein2genome:local exon 346850 347047 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 346850 347047 190 + . alignment_id 0 ; Query GL50803_31203-t26_1-p1 ; Align 346850 1 198 utg47_pilon exonerate:protein2genome:local gene 576644 576892 228 + . gene_id 0 ; sequence GL50803_31208-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 576644 576892 . + . utg47_pilon exonerate:protein2genome:local exon 576644 576892 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 576644 576892 228 + . alignment_id 0 ; Query GL50803_31208-t26_1-p1 ; Align 576644 1 249 utg47_pilon exonerate:protein2genome:local gene 582764 582970 198 + . gene_id 0 ; sequence GL50803_31209-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 582764 582970 . + . utg47_pilon exonerate:protein2genome:local exon 582764 582970 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 582764 582970 198 + . alignment_id 0 ; Query GL50803_31209-t26_1-p1 ; Align 582764 1 207 utg47_pilon exonerate:protein2genome:local gene 1928415 1928808 426 - . gene_id 0 ; sequence GL50803_31220-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1928415 1928808 . - . utg47_pilon exonerate:protein2genome:local exon 1928415 1928808 . - . insertions 9 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1928415 1928808 426 - . alignment_id 0 ; Query GL50803_31220-t26_1-p1 ; Align 1928809 1 234 ; Align 1928572 79 15 ; Align 1928556 84 27 ; Align 1928526 93 39 ; Align 1928484 106 69 utg47_pilon exonerate:protein2genome:local gene 1500883 1501273 426 - . gene_id 0 ; sequence GL50803_31220-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1500883 1501273 . - . utg47_pilon exonerate:protein2genome:local exon 1500883 1501273 . - . insertions 9 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1500883 1501273 426 - . alignment_id 0 ; Query GL50803_31220-t26_1-p1 ; Align 1501274 1 234 ; Align 1501037 79 15 ; Align 1501021 84 27 ; Align 1500991 93 39 ; Align 1500949 106 66 utg11_pilon exonerate:protein2genome:local gene 373949 374293 362 + . gene_id 0 ; sequence GL50803_31237-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 373949 374293 . + . utg11_pilon exonerate:protein2genome:local exon 373949 374293 . + . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 373949 374293 362 + . alignment_id 0 ; Query GL50803_31237-t26_1-p1 ; Align 373949 10 81 ; Align 374030 40 264 utg731_pilon exonerate:protein2genome:local gene 358325 358600 115 + . gene_id 0 ; sequence GL50803_31241-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 358325 358600 . + . utg731_pilon exonerate:protein2genome:local exon 358325 358600 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 358325 358600 115 + . alignment_id 0 ; Query GL50803_31241-t26_1-p1 ; Align 358325 1 276 utg47_pilon exonerate:protein2genome:local gene 319766 319921 223 + . gene_id 0 ; sequence GL50803_31243-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 319766 319921 . + . utg47_pilon exonerate:protein2genome:local exon 319766 319921 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 319766 319921 223 + . alignment_id 0 ; Query GL50803_31243-t26_1-p1 ; Align 319766 1 156 utg47_pilon exonerate:protein2genome:local gene 849638 849847 107 + . gene_id 0 ; sequence GL50803_31251-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 849638 849847 . + . utg47_pilon exonerate:protein2genome:local exon 849638 849847 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 849638 849847 107 + . alignment_id 0 ; Query GL50803_31251-t26_1-p1 ; Align 849638 1 66 ; Align 849704 24 144 utg308_pilon exonerate:protein2genome:local gene 406044 464092 224 - . gene_id 0 ; sequence GL50803_31257-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 463981 464092 . - . utg308_pilon exonerate:protein2genome:local exon 463981 464092 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 463979 463980 . - . intron_id 1 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 406208 463980 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 406208 406209 . - . intron_id 0 ; splice_site "AA" utg308_pilon exonerate:protein2genome:local cds 406044 406207 . - . utg308_pilon exonerate:protein2genome:local exon 406044 406207 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 406044 464092 224 - . alignment_id 0 ; Query GL50803_31257-t26_1-p1 ; Align 464093 1 111 ; Align 406206 39 162 utg11_pilon exonerate:protein2genome:local gene 939112 939204 118 + . gene_id 0 ; sequence GL50803_31258-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 939112 939204 . + . utg11_pilon exonerate:protein2genome:local exon 939112 939204 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 939112 939204 118 + . alignment_id 0 ; Query GL50803_31258-t26_1-p1 ; Align 939112 19 93 utg47_pilon exonerate:protein2genome:local gene 549944 550213 327 - . gene_id 0 ; sequence GL50803_31271-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 549944 550213 . - . utg47_pilon exonerate:protein2genome:local exon 549944 550213 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 549944 550213 327 - . alignment_id 0 ; Query GL50803_31271-t26_1-p1 ; Align 550214 1 270 utg47_pilon exonerate:protein2genome:local gene 552037 552285 355 - . gene_id 0 ; sequence GL50803_31272-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 552037 552285 . - . utg47_pilon exonerate:protein2genome:local exon 552037 552285 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 552037 552285 355 - . alignment_id 0 ; Query GL50803_31272-t26_1-p1 ; Align 552286 1 249 utg349_pilon exonerate:protein2genome:local gene 1426288 1428567 3457 - . gene_id 0 ; sequence GL50803_31295-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1426288 1428567 . - . utg349_pilon exonerate:protein2genome:local exon 1426288 1428567 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1426288 1428567 3457 - . alignment_id 0 ; Query GL50803_31295-t26_1-p1 ; Align 1428568 1 84 ; Align 1428481 29 2193 utg11_pilon exonerate:protein2genome:local gene 111341 113518 3292 + . gene_id 0 ; sequence GL50803_31309-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 111341 113518 . + . utg11_pilon exonerate:protein2genome:local exon 111341 113518 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 111341 113518 3292 + . alignment_id 0 ; Query GL50803_31309-t26_1-p1 ; Align 111341 1 2178 utg47_pilon exonerate:protein2genome:local gene 616100 616237 119 + . gene_id 0 ; sequence GL50803_31311-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 616100 616237 . + . utg47_pilon exonerate:protein2genome:local exon 616100 616237 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 616100 616237 119 + . alignment_id 0 ; Query GL50803_31311-t26_1-p1 ; Align 616100 3 138 utg47_pilon exonerate:protein2genome:local gene 620909 621167 349 - . gene_id 0 ; sequence GL50803_31312-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 620909 621167 . - . utg47_pilon exonerate:protein2genome:local exon 620909 621167 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 620909 621167 349 - . alignment_id 0 ; Query GL50803_31312-t26_1-p1 ; Align 621168 6 45 ; Align 621122 21 213 utg18_pilon exonerate:protein2genome:local gene 278514 278924 523 - . gene_id 0 ; sequence GL50803_31319-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 278514 278924 . - . utg18_pilon exonerate:protein2genome:local exon 278514 278924 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 278514 278924 523 - . alignment_id 0 ; Query GL50803_31319-t26_1-p1 ; Align 278925 1 411 utg18_pilon exonerate:protein2genome:local gene 274525 274783 230 + . gene_id 0 ; sequence GL50803_31321-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 274525 274783 . + . utg18_pilon exonerate:protein2genome:local exon 274525 274783 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg18_pilon exonerate:protein2genome:local similarity 274525 274783 230 + . alignment_id 0 ; Query GL50803_31321-t26_1-p1 ; Align 274525 1 156 ; Align 274682 53 102 utg47_pilon exonerate:protein2genome:local gene 1762951 1763258 260 + . gene_id 0 ; sequence GL50803_31323-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1762951 1763258 . + . utg47_pilon exonerate:protein2genome:local exon 1762951 1763258 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1762951 1763258 260 + . alignment_id 0 ; Query GL50803_31323-t26_1-p1 ; Align 1762951 11 48 ; Align 1763001 27 3 ; Align 1763004 29 255 utg47_pilon exonerate:protein2genome:local gene 1758769 1759038 315 + . gene_id 0 ; sequence GL50803_31325-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1758769 1759038 . + . utg47_pilon exonerate:protein2genome:local exon 1758769 1759038 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1758769 1759038 315 + . alignment_id 0 ; Query GL50803_31325-t26_1-p1 ; Align 1758769 2 270 utg11_pilon exonerate:protein2genome:local gene 1467877 1468212 439 + . gene_id 0 ; sequence GL50803_31331-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1467877 1468212 . + . utg11_pilon exonerate:protein2genome:local exon 1467877 1468212 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1467877 1468212 439 + . alignment_id 0 ; Query GL50803_31331-t26_1-p1 ; Align 1467877 16 336 utg99_pilon exonerate:protein2genome:local gene 120906 121082 145 - . gene_id 0 ; sequence GL50803_31333-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 120906 121082 . - . utg99_pilon exonerate:protein2genome:local exon 120906 121082 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 120906 121082 145 - . alignment_id 0 ; Query GL50803_31333-t26_1-p1 ; Align 121083 25 177 utg99_pilon exonerate:protein2genome:local gene 120906 121082 145 - . gene_id 0 ; sequence GL50803_31333-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 120906 121082 . - . utg99_pilon exonerate:protein2genome:local exon 120906 121082 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 120906 121082 145 - . alignment_id 0 ; Query GL50803_31333-t26_1-p1 ; Align 121083 98 177 utg731_pilon exonerate:protein2genome:local gene 491174 491638 677 + . gene_id 0 ; sequence GL50803_31339-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 491174 491638 . + . utg731_pilon exonerate:protein2genome:local exon 491174 491638 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 491174 491638 677 + . alignment_id 0 ; Query GL50803_31339-t26_1-p1 ; Align 491174 21 465 utg731_pilon exonerate:protein2genome:local gene 502764 504883 2431 - . gene_id 0 ; sequence GL50803_31340-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 502764 504883 . - . utg731_pilon exonerate:protein2genome:local exon 502764 504883 . - . insertions 0 ; deletions 2 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 502764 504883 2431 - . alignment_id 0 ; Query GL50803_31340-t26_1-p1 ; Align 504884 1 345 ; Align 504539 117 957 ; Align 503580 436 3 ; Align 503577 438 813 utg731_pilon exonerate:protein2genome:local gene 1437303 1437557 326 - . gene_id 0 ; sequence GL50803_31341-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1437303 1437557 . - . utg731_pilon exonerate:protein2genome:local exon 1437303 1437557 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1437303 1437557 326 - . alignment_id 0 ; Query GL50803_31341-t26_1-p1 ; Align 1437558 4 255 utg47_pilon exonerate:protein2genome:local gene 568963 569178 240 - . gene_id 0 ; sequence GL50803_31345-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 568963 569178 . - . utg47_pilon exonerate:protein2genome:local exon 568963 569178 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 568963 569178 240 - . alignment_id 0 ; Query GL50803_31345-t26_1-p1 ; Align 569179 1 216 utg47_pilon exonerate:protein2genome:local gene 2006795 2007097 305 - . gene_id 0 ; sequence GL50803_31362-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2006795 2007097 . - . utg47_pilon exonerate:protein2genome:local exon 2006795 2007097 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2006795 2007097 305 - . alignment_id 0 ; Query GL50803_31362-t26_1-p1 ; Align 2007098 2 303 utg64_pilon exonerate:protein2genome:local gene 214963 215079 121 - . gene_id 0 ; sequence GL50803_31366-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 214963 215079 . - . utg64_pilon exonerate:protein2genome:local exon 214963 215079 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 214963 215079 121 - . alignment_id 0 ; Query GL50803_31366-t26_1-p1 ; Align 215080 101 117 utg11_pilon exonerate:protein2genome:local gene 1414951 1415392 481 + . gene_id 0 ; sequence GL50803_31372-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1414951 1415392 . + . utg11_pilon exonerate:protein2genome:local exon 1414951 1415392 . + . insertions 0 ; deletions 3 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 1414951 1415392 481 + . alignment_id 0 ; Query GL50803_31372-t26_1-p1 ; Align 1414951 1 366 ; Align 1415318 123 9 ; Align 1415327 129 66 utg18_pilon exonerate:protein2genome:local gene 211320 211580 330 - . gene_id 0 ; sequence GL50803_31375-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 211320 211580 . - . utg18_pilon exonerate:protein2genome:local exon 211320 211580 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 211320 211580 330 - . alignment_id 0 ; Query GL50803_31375-t26_1-p1 ; Align 211581 2 261 utg212_pilon exonerate:protein2genome:local gene 146181 146783 689 + . gene_id 0 ; sequence GL50803_31383-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 146181 146783 . + . utg212_pilon exonerate:protein2genome:local exon 146181 146783 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 146181 146783 689 + . alignment_id 0 ; Query GL50803_31383-t26_1-p1 ; Align 146181 2 603 utg212_pilon exonerate:protein2genome:local gene 133814 134087 370 + . gene_id 0 ; sequence GL50803_31386-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 133814 134087 . + . utg212_pilon exonerate:protein2genome:local exon 133814 134087 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 133814 134087 370 + . alignment_id 0 ; Query GL50803_31386-t26_1-p1 ; Align 133814 1 39 ; Align 133854 14 234 utg349_pilon exonerate:protein2genome:local gene 1541264 1541404 149 - . gene_id 0 ; sequence GL50803_31399-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1541264 1541404 . - . utg349_pilon exonerate:protein2genome:local exon 1541264 1541404 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1541264 1541404 149 - . alignment_id 0 ; Query GL50803_31399-t26_1-p1 ; Align 1541405 14 141 utg47_pilon exonerate:protein2genome:local gene 1876321 1876632 348 + . gene_id 0 ; sequence GL50803_31402-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1876321 1876632 . + . utg47_pilon exonerate:protein2genome:local exon 1876321 1876632 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1876321 1876632 348 + . alignment_id 0 ; Query GL50803_31402-t26_1-p1 ; Align 1876321 1 312 utg11_pilon exonerate:protein2genome:local gene 1147990 1148226 239 - . gene_id 0 ; sequence GL50803_31404-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1147990 1148226 . - . utg11_pilon exonerate:protein2genome:local exon 1147990 1148226 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1147990 1148226 239 - . alignment_id 0 ; Query GL50803_31404-t26_1-p1 ; Align 1148227 1 237 utg18_pilon exonerate:protein2genome:local gene 55481 55651 158 - . gene_id 0 ; sequence GL50803_31406-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 55481 55651 . - . utg18_pilon exonerate:protein2genome:local exon 55481 55651 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 55481 55651 158 - . alignment_id 0 ; Query GL50803_31406-t26_1-p1 ; Align 55652 2 171 utg212_pilon exonerate:protein2genome:local gene 34103 34630 528 + . gene_id 0 ; sequence GL50803_31407-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 34103 34630 . + . utg212_pilon exonerate:protein2genome:local exon 34103 34630 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 34103 34630 528 + . alignment_id 0 ; Query GL50803_31407-t26_1-p1 ; Align 34103 1 528 utg47_pilon exonerate:protein2genome:local gene 1073043 1073756 742 - . gene_id 0 ; sequence GL50803_3141-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1073043 1073756 . - . utg47_pilon exonerate:protein2genome:local exon 1073043 1073756 . - . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 1073043 1073756 742 - . alignment_id 0 ; Query GL50803_3141-t26_1-p1 ; Align 1073757 14 297 ; Align 1073460 117 417 utg64_pilon exonerate:protein2genome:local gene 641387 641695 302 - . gene_id 0 ; sequence GL50803_31415-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 641387 641695 . - . utg64_pilon exonerate:protein2genome:local exon 641387 641695 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 641387 641695 302 - . alignment_id 0 ; Query GL50803_31415-t26_1-p1 ; Align 641696 1 309 utg308_pilon exonerate:protein2genome:local gene 623586 623723 203 + . gene_id 0 ; sequence GL50803_31417-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 623586 623723 . + . utg308_pilon exonerate:protein2genome:local exon 623586 623723 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 623586 623723 203 + . alignment_id 0 ; Query GL50803_31417-t26_1-p1 ; Align 623586 1 138 utg308_pilon exonerate:protein2genome:local gene 218384 218606 170 + . gene_id 0 ; sequence GL50803_31420-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 218384 218606 . + . utg308_pilon exonerate:protein2genome:local exon 218384 218606 . + . insertions 0 ; deletions 0 ; frameshifts 4 utg308_pilon exonerate:protein2genome:local similarity 218384 218606 170 + . alignment_id 0 ; Query GL50803_31420-t26_1-p1 ; Align 218384 1 60 ; Align 218448 21 159 utg47_pilon exonerate:protein2genome:local gene 455523 455885 371 - . gene_id 0 ; sequence GL50803_31436-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 455523 455885 . - . utg47_pilon exonerate:protein2genome:local exon 455523 455885 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 455523 455885 371 - . alignment_id 0 ; Query GL50803_31436-t26_1-p1 ; Align 455886 1 363 utg47_pilon exonerate:protein2genome:local gene 457397 457798 375 - . gene_id 0 ; sequence GL50803_31437-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 457397 457798 . - . utg47_pilon exonerate:protein2genome:local exon 457397 457798 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 457397 457798 375 - . alignment_id 0 ; Query GL50803_31437-t26_1-p1 ; Align 457799 1 402 utg349_pilon exonerate:protein2genome:local gene 727689 728045 498 + . gene_id 0 ; sequence GL50803_31439-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 727689 728045 . + . utg349_pilon exonerate:protein2genome:local exon 727689 728045 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 727689 728045 498 + . alignment_id 0 ; Query GL50803_31439-t26_1-p1 ; Align 727689 1 357 utg349_pilon exonerate:protein2genome:local gene 707744 708055 383 + . gene_id 0 ; sequence GL50803_31443-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 707744 708055 . + . utg349_pilon exonerate:protein2genome:local exon 707744 708055 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 707744 708055 383 + . alignment_id 0 ; Query GL50803_31443-t26_1-p1 ; Align 707744 1 312 utg265_pilon exonerate:protein2genome:local gene 52250 52543 209 + . gene_id 0 ; sequence GL50803_31447-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 52250 52543 . + . utg265_pilon exonerate:protein2genome:local exon 52250 52543 . + . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 52250 52543 209 + . alignment_id 0 ; Query GL50803_31447-t26_1-p1 ; Align 52250 6 81 ; Align 52337 33 207 utg265_pilon exonerate:protein2genome:local gene 42737 43171 533 + . gene_id 0 ; sequence GL50803_31448-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 42737 43171 . + . utg265_pilon exonerate:protein2genome:local exon 42737 43171 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 42737 43171 533 + . alignment_id 0 ; Query GL50803_31448-t26_1-p1 ; Align 42737 1 435 utg47_pilon exonerate:protein2genome:local gene 919486 920166 592 - . gene_id 0 ; sequence GL50803_31454-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 919486 920166 . - . utg47_pilon exonerate:protein2genome:local exon 919486 920166 . - . insertions 3 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 919486 920166 592 - . alignment_id 0 ; Query GL50803_31454-t26_1-p1 ; Align 920167 1 219 ; Align 919945 74 288 ; Align 919657 171 171 utg349_pilon exonerate:protein2genome:local gene 402822 405638 3679 - . gene_id 0 ; sequence GL50803_3146-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 402822 405638 . - . utg349_pilon exonerate:protein2genome:local exon 402822 405638 . - . insertions 0 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 402822 405638 3679 - . alignment_id 0 ; Query GL50803_3146-t26_1-p1 ; Align 405639 1 1614 ; Align 404025 541 141 ; Align 403884 592 1062 utg47_pilon exonerate:protein2genome:local gene 1522502 1522900 365 + . gene_id 0 ; sequence GL50803_31465-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1522502 1522900 . + . utg47_pilon exonerate:protein2genome:local exon 1522502 1522900 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1522502 1522900 365 + . alignment_id 0 ; Query GL50803_31465-t26_1-p1 ; Align 1522502 4 399 utg265_pilon exonerate:protein2genome:local gene 143115 143644 449 - . gene_id 0 ; sequence GL50803_31468-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 143115 143644 . - . utg265_pilon exonerate:protein2genome:local exon 143115 143644 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 143115 143644 449 - . alignment_id 0 ; Query GL50803_31468-t26_1-p1 ; Align 143645 3 66 ; Align 143577 26 462 utg265_pilon exonerate:protein2genome:local gene 135282 135549 333 + . gene_id 0 ; sequence GL50803_31469-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 135282 135549 . + . utg265_pilon exonerate:protein2genome:local exon 135282 135549 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 135282 135549 333 + . alignment_id 0 ; Query GL50803_31469-t26_1-p1 ; Align 135282 1 234 ; Align 135517 79 33 utg349_pilon exonerate:protein2genome:local gene 405771 407540 2176 - . gene_id 0 ; sequence GL50803_3147-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 405771 407540 . - . utg349_pilon exonerate:protein2genome:local exon 405771 407540 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 405771 407540 2176 - . alignment_id 0 ; Query GL50803_3147-t26_1-p1 ; Align 407541 1 1770 utg99_pilon exonerate:protein2genome:local gene 22419 22520 103 + . gene_id 0 ; sequence GL50803_31471-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 22419 22520 . + . utg99_pilon exonerate:protein2genome:local exon 22419 22520 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 22419 22520 103 + . alignment_id 0 ; Query GL50803_31471-t26_1-p1 ; Align 22419 1 102 utg349_pilon exonerate:protein2genome:local gene 1602473 1602785 190 - . gene_id 0 ; sequence GL50803_31482-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1602473 1602785 . - . utg349_pilon exonerate:protein2genome:local exon 1602473 1602785 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 1602473 1602785 190 - . alignment_id 0 ; Query GL50803_31482-t26_1-p1 ; Align 1602786 1 234 ; Align 1602551 80 78 utg349_pilon exonerate:protein2genome:local gene 1614741 1614929 183 + . gene_id 0 ; sequence GL50803_31484-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1614741 1614929 . + . utg349_pilon exonerate:protein2genome:local exon 1614741 1614929 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1614741 1614929 183 + . alignment_id 0 ; Query GL50803_31484-t26_1-p1 ; Align 1614741 1 189 utg47_pilon exonerate:protein2genome:local gene 1697297 1697431 217 + . gene_id 0 ; sequence GL50803_31503-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1697297 1697431 . + . utg47_pilon exonerate:protein2genome:local exon 1697297 1697431 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1697297 1697431 217 + . alignment_id 0 ; Query GL50803_31503-t26_1-p1 ; Align 1697297 33 135 utg47_pilon exonerate:protein2genome:local gene 1699407 1699541 217 + . gene_id 0 ; sequence GL50803_31503-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1699407 1699541 . + . utg47_pilon exonerate:protein2genome:local exon 1699407 1699541 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1699407 1699541 217 + . alignment_id 0 ; Query GL50803_31503-t26_1-p1 ; Align 1699407 33 135 utg47_pilon exonerate:protein2genome:local gene 1075146 1075638 492 - . gene_id 0 ; sequence GL50803_31515-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1075146 1075638 . - . utg47_pilon exonerate:protein2genome:local exon 1075146 1075638 . - . insertions 0 ; deletions 3 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1075146 1075638 492 - . alignment_id 0 ; Query GL50803_31515-t26_1-p1 ; Align 1075639 1 333 ; Align 1075305 112 36 ; Align 1075269 127 123 utg99_pilon exonerate:protein2genome:local gene 137312 137542 320 - . gene_id 0 ; sequence GL50803_31522-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 137312 137542 . - . utg99_pilon exonerate:protein2genome:local exon 137312 137542 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 137312 137542 320 - . alignment_id 0 ; Query GL50803_31522-t26_1-p1 ; Align 137543 6 231 utg11_pilon exonerate:protein2genome:local gene 227554 227754 115 + . gene_id 0 ; sequence GL50803_31523-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 227554 227754 . + . utg11_pilon exonerate:protein2genome:local exon 227554 227754 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 227554 227754 115 + . alignment_id 0 ; Query GL50803_31523-t26_1-p1 ; Align 227554 9 45 ; Align 227599 25 156 utg11_pilon exonerate:protein2genome:local gene 189565 189690 103 + . gene_id 0 ; sequence GL50803_31526-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 189565 189690 . + . utg11_pilon exonerate:protein2genome:local exon 189565 189690 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 189565 189690 103 + . alignment_id 0 ; Query GL50803_31526-t26_1-p1 ; Align 189565 1 126 utg212_pilon exonerate:protein2genome:local gene 155182 155346 186 - . gene_id 0 ; sequence GL50803_31529-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 155182 155346 . - . utg212_pilon exonerate:protein2genome:local exon 155182 155346 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 155182 155346 186 - . alignment_id 0 ; Query GL50803_31529-t26_1-p1 ; Align 155347 1 165 utg212_pilon exonerate:protein2genome:local gene 155183 156043 1239 + . gene_id 0 ; sequence GL50803_31530-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 155183 156043 . + . utg212_pilon exonerate:protein2genome:local exon 155183 156043 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 155183 156043 1239 + . alignment_id 0 ; Query GL50803_31530-t26_1-p1 ; Align 155183 1 861 utg212_pilon exonerate:protein2genome:local gene 159003 159488 569 - . gene_id 0 ; sequence GL50803_31532-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 159003 159488 . - . utg212_pilon exonerate:protein2genome:local exon 159003 159488 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 159003 159488 569 - . alignment_id 0 ; Query GL50803_31532-t26_1-p1 ; Align 159489 1 486 utg18_pilon exonerate:protein2genome:local gene 114062 114520 282 + . gene_id 0 ; sequence GL50803_31536-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 114062 114520 . + . utg18_pilon exonerate:protein2genome:local exon 114062 114520 . + . insertions 3 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 114062 114520 282 + . alignment_id 0 ; Query GL50803_31536-t26_1-p1 ; Align 114062 1 60 ; Align 114125 21 396 utg265_pilon exonerate:protein2genome:local gene 728999 729259 404 + . gene_id 0 ; sequence GL50803_3154-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 728999 729259 . + . utg265_pilon exonerate:protein2genome:local exon 728999 729259 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 728999 729259 404 + . alignment_id 0 ; Query GL50803_3154-t26_1-p1 ; Align 728999 1 261 utg47_pilon exonerate:protein2genome:local gene 998204 998353 128 - . gene_id 0 ; sequence GL50803_31541-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 998204 998353 . - . utg47_pilon exonerate:protein2genome:local exon 998204 998353 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 998204 998353 128 - . alignment_id 0 ; Query GL50803_31541-t26_1-p1 ; Align 998354 1 150 utg11_pilon exonerate:protein2genome:local gene 51909 52151 250 + . gene_id 0 ; sequence GL50803_31546-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 51909 52151 . + . utg11_pilon exonerate:protein2genome:local exon 51909 52151 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 51909 52151 250 + . alignment_id 0 ; Query GL50803_31546-t26_1-p1 ; Align 51909 3 243 utg11_pilon exonerate:protein2genome:local gene 48908 49296 316 - . gene_id 0 ; sequence GL50803_31547-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 48908 49296 . - . utg11_pilon exonerate:protein2genome:local exon 48908 49296 . - . insertions 0 ; deletions 1 ; frameshifts 5 utg11_pilon exonerate:protein2genome:local similarity 48908 49296 316 - . alignment_id 0 ; Query GL50803_31547-t26_1-p1 ; Align 49297 3 111 ; Align 49182 40 222 ; Align 48960 115 3 ; Align 48956 116 48 utg349_pilon exonerate:protein2genome:local gene 202633 202803 135 + . gene_id 0 ; sequence GL50803_31556-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 202633 202803 . + . utg349_pilon exonerate:protein2genome:local exon 202633 202803 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 202633 202803 135 + . alignment_id 0 ; Query GL50803_31556-t26_1-p1 ; Align 202633 1 171 utg349_pilon exonerate:protein2genome:local gene 114720 114962 237 - . gene_id 0 ; sequence GL50803_31565-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 114720 114962 . - . utg349_pilon exonerate:protein2genome:local exon 114720 114962 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 114720 114962 237 - . alignment_id 0 ; Query GL50803_31565-t26_1-p1 ; Align 114963 2 222 ; Align 114741 77 21 utg64_pilon exonerate:protein2genome:local gene 722749 722947 199 - . gene_id 0 ; sequence GL50803_31567-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 722749 722947 . - . utg64_pilon exonerate:protein2genome:local exon 722749 722947 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 722749 722947 199 - . alignment_id 0 ; Query GL50803_31567-t26_1-p1 ; Align 722948 1 141 ; Align 722806 48 57 utg265_pilon exonerate:protein2genome:local gene 699985 731503 2300 - . gene_id 0 ; sequence GL50803_3157-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 729484 731503 . - . utg265_pilon exonerate:protein2genome:local exon 729484 731503 . - . insertions 0 ; deletions 8 utg265_pilon exonerate:protein2genome:local splice5 729482 729483 . - . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 700014 729483 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 700014 700015 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 699985 700013 . - . utg265_pilon exonerate:protein2genome:local exon 699985 700013 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 699985 731503 2300 - . alignment_id 0 ; Query GL50803_3157-t26_1-p1 ; Align 731504 1 423 ; Align 731081 144 378 ; Align 730703 272 267 ; Align 730436 365 951 ; Align 700012 683 27 utg349_pilon exonerate:protein2genome:local gene 1574089 1574277 300 + . gene_id 0 ; sequence GL50803_31570-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1574089 1574277 . + . utg349_pilon exonerate:protein2genome:local exon 1574089 1574277 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1574089 1574277 300 + . alignment_id 0 ; Query GL50803_31570-t26_1-p1 ; Align 1574089 1 189 utg349_pilon exonerate:protein2genome:local gene 1574807 1575175 363 + . gene_id 0 ; sequence GL50803_31571-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1574807 1575175 . + . utg349_pilon exonerate:protein2genome:local exon 1574807 1575175 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1574807 1575175 363 + . alignment_id 0 ; Query GL50803_31571-t26_1-p1 ; Align 1574807 1 369 utg11_pilon exonerate:protein2genome:local gene 1606891 1607271 438 + . gene_id 0 ; sequence GL50803_31575-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1606891 1607271 . + . utg11_pilon exonerate:protein2genome:local exon 1606891 1607271 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1606891 1607271 438 + . alignment_id 0 ; Query GL50803_31575-t26_1-p1 ; Align 1606891 1 381 utg11_pilon exonerate:protein2genome:local gene 1578093 1578708 820 + . gene_id 0 ; sequence GL50803_31576-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1578093 1578708 . + . utg11_pilon exonerate:protein2genome:local exon 1578093 1578708 . + . insertions 0 ; deletions 0 ; frameshifts 4 utg11_pilon exonerate:protein2genome:local similarity 1578093 1578708 820 + . alignment_id 0 ; Query GL50803_31576-t26_1-p1 ; Align 1578093 1 102 ; Align 1578199 35 510 utg265_pilon exonerate:protein2genome:local gene 731564 732157 983 + . gene_id 0 ; sequence GL50803_3158-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 731564 732157 . + . utg265_pilon exonerate:protein2genome:local exon 731564 732157 . + . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 731564 732157 983 + . alignment_id 0 ; Query GL50803_3158-t26_1-p1 ; Align 731564 1 378 ; Align 731945 127 213 utg731_pilon exonerate:protein2genome:local gene 834558 834920 593 + . gene_id 0 ; sequence GL50803_31580-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 834558 834920 . + . utg731_pilon exonerate:protein2genome:local exon 834558 834920 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 834558 834920 593 + . alignment_id 0 ; Query GL50803_31580-t26_1-p1 ; Align 834558 1 363 utg731_pilon exonerate:protein2genome:local gene 835230 835589 539 + . gene_id 0 ; sequence GL50803_31582-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 835230 835589 . + . utg731_pilon exonerate:protein2genome:local exon 835230 835589 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 835230 835589 539 + . alignment_id 0 ; Query GL50803_31582-t26_1-p1 ; Align 835230 1 339 ; Align 835569 115 21 utg349_pilon exonerate:protein2genome:local gene 386954 387106 206 + . gene_id 0 ; sequence GL50803_31591-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 386954 387106 . + . utg349_pilon exonerate:protein2genome:local exon 386954 387106 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 386954 387106 206 + . alignment_id 0 ; Query GL50803_31591-t26_1-p1 ; Align 386954 1 153 utg349_pilon exonerate:protein2genome:local gene 382127 382243 127 - . gene_id 0 ; sequence GL50803_31592-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 382127 382243 . - . utg349_pilon exonerate:protein2genome:local exon 382127 382243 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 382127 382243 127 - . alignment_id 0 ; Query GL50803_31592-t26_1-p1 ; Align 382244 69 117 utg265_pilon exonerate:protein2genome:local gene 407074 407238 152 - . gene_id 0 ; sequence GL50803_31594-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 407074 407238 . - . utg265_pilon exonerate:protein2genome:local exon 407074 407238 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 407074 407238 152 - . alignment_id 0 ; Query GL50803_31594-t26_1-p1 ; Align 407239 3 165 utg47_pilon exonerate:protein2genome:local gene 954496 954753 204 - . gene_id 0 ; sequence GL50803_31596-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 954496 954753 . - . utg47_pilon exonerate:protein2genome:local exon 954496 954753 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 954496 954753 204 - . alignment_id 0 ; Query GL50803_31596-t26_1-p1 ; Align 954754 3 258 utg47_pilon exonerate:protein2genome:local gene 959380 959826 641 - . gene_id 0 ; sequence GL50803_31597-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 959380 959826 . - . utg47_pilon exonerate:protein2genome:local exon 959380 959826 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 959380 959826 641 - . alignment_id 0 ; Query GL50803_31597-t26_1-p1 ; Align 959827 1 447 utg47_pilon exonerate:protein2genome:local gene 976053 976250 190 - . gene_id 0 ; sequence GL50803_31598-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 976053 976250 . - . utg47_pilon exonerate:protein2genome:local exon 976053 976250 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 976053 976250 190 - . alignment_id 0 ; Query GL50803_31598-t26_1-p1 ; Align 976251 1 198 utg47_pilon exonerate:protein2genome:local gene 869159 869296 218 - . gene_id 0 ; sequence GL50803_31599-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 869159 869296 . - . utg47_pilon exonerate:protein2genome:local exon 869159 869296 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 869159 869296 218 - . alignment_id 0 ; Query GL50803_31599-t26_1-p1 ; Align 869297 33 138 utg47_pilon exonerate:protein2genome:local gene 1566106 1566450 370 - . gene_id 0 ; sequence GL50803_31602-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1566106 1566450 . - . utg47_pilon exonerate:protein2genome:local exon 1566106 1566450 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1566106 1566450 370 - . alignment_id 0 ; Query GL50803_31602-t26_1-p1 ; Align 1566451 2 126 ; Align 1566322 44 216 utg47_pilon exonerate:protein2genome:local gene 1956200 1956511 176 + . gene_id 0 ; sequence GL50803_31608-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1956200 1956511 . + . utg47_pilon exonerate:protein2genome:local exon 1956200 1956511 . + . insertions 6 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1956200 1956511 176 + . alignment_id 0 ; Query GL50803_31608-t26_1-p1 ; Align 1956200 4 69 ; Align 1956269 28 60 ; Align 1956332 48 33 ; Align 1956368 59 144 utg731_pilon exonerate:protein2genome:local gene 775681 776010 425 - . gene_id 0 ; sequence GL50803_31614-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 775681 776010 . - . utg731_pilon exonerate:protein2genome:local exon 775681 776010 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 775681 776010 425 - . alignment_id 0 ; Query GL50803_31614-t26_1-p1 ; Align 776011 1 330 utg212_pilon exonerate:protein2genome:local gene 502182 502556 573 + . gene_id 0 ; sequence GL50803_31617-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 502182 502556 . + . utg212_pilon exonerate:protein2genome:local exon 502182 502556 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 502182 502556 573 + . alignment_id 0 ; Query GL50803_31617-t26_1-p1 ; Align 502182 1 375 utg731_pilon exonerate:protein2genome:local gene 130590 130889 383 + . gene_id 0 ; sequence GL50803_31624-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 130590 130889 . + . utg731_pilon exonerate:protein2genome:local exon 130590 130889 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 130590 130889 383 + . alignment_id 0 ; Query GL50803_31624-t26_1-p1 ; Align 130590 1 300 utg11_pilon exonerate:protein2genome:local gene 1365635 1365841 190 + . gene_id 0 ; sequence GL50803_31631-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1365635 1365841 . + . utg11_pilon exonerate:protein2genome:local exon 1365635 1365841 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1365635 1365841 190 + . alignment_id 0 ; Query GL50803_31631-t26_1-p1 ; Align 1365635 2 207 utg11_pilon exonerate:protein2genome:local gene 1380569 1380790 256 + . gene_id 0 ; sequence GL50803_31637-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1380569 1380790 . + . utg11_pilon exonerate:protein2genome:local exon 1380569 1380790 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1380569 1380790 256 + . alignment_id 0 ; Query GL50803_31637-t26_1-p1 ; Align 1380569 2 222 utg11_pilon exonerate:protein2genome:local gene 313204 313509 460 + . gene_id 0 ; sequence GL50803_31643-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 313204 313509 . + . utg11_pilon exonerate:protein2genome:local exon 313204 313509 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 313204 313509 460 + . alignment_id 0 ; Query GL50803_31643-t26_1-p1 ; Align 313204 1 306 utg308_pilon exonerate:protein2genome:local gene 741126 741620 398 + . gene_id 0 ; sequence GL50803_31647-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 741126 741620 . + . utg308_pilon exonerate:protein2genome:local exon 741126 741620 . + . insertions 15 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 741126 741620 398 + . alignment_id 0 ; Query GL50803_31647-t26_1-p1 ; Align 741126 2 132 ; Align 741261 46 15 ; Align 741288 51 333 utg731_pilon exonerate:protein2genome:local gene 1326698 1426167 221 - . gene_id 0 ; sequence GL50803_31655-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1426020 1426167 . - . utg731_pilon exonerate:protein2genome:local exon 1426020 1426167 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1426018 1426019 . - . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1326898 1426019 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1326898 1326899 . - . intron_id 0 ; splice_site "CG" utg731_pilon exonerate:protein2genome:local cds 1326698 1326897 . - . utg731_pilon exonerate:protein2genome:local exon 1326698 1326897 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1326698 1426167 221 - . alignment_id 0 ; Query GL50803_31655-t26_1-p1 ; Align 1426168 1 147 ; Align 1326896 51 27 ; Align 1326866 60 168 utg64_pilon exonerate:protein2genome:local gene 146732 280058 352 - . gene_id 0 ; sequence GL50803_31657-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 279756 280058 . - . utg64_pilon exonerate:protein2genome:local exon 279756 280058 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 279754 279755 . - . intron_id 1 ; splice_site "GA" utg64_pilon exonerate:protein2genome:local intron 146954 279755 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 146954 146955 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 146732 146953 . - . utg64_pilon exonerate:protein2genome:local exon 146732 146953 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 146732 280058 352 - . alignment_id 0 ; Query GL50803_31657-t26_1-p1 ; Align 280059 2 18 ; Align 280038 8 282 ; Align 146954 102 222 utg11_pilon exonerate:protein2genome:local gene 171201 171449 193 - . gene_id 0 ; sequence GL50803_31658-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 171201 171449 . - . utg11_pilon exonerate:protein2genome:local exon 171201 171449 . - . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 171201 171449 193 - . alignment_id 0 ; Query GL50803_31658-t26_1-p1 ; Align 171450 1 144 ; Align 171300 49 99 utg47_pilon exonerate:protein2genome:local gene 1368727 1369049 351 - . gene_id 0 ; sequence GL50803_31661-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1368727 1369049 . - . utg47_pilon exonerate:protein2genome:local exon 1368727 1369049 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1368727 1369049 351 - . alignment_id 0 ; Query GL50803_31661-t26_1-p1 ; Align 1369050 1 153 ; Align 1368895 53 168 utg47_pilon exonerate:protein2genome:local gene 1304324 1304449 144 - . gene_id 0 ; sequence GL50803_31664-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1304324 1304449 . - . utg47_pilon exonerate:protein2genome:local exon 1304324 1304449 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1304324 1304449 144 - . alignment_id 0 ; Query GL50803_31664-t26_1-p1 ; Align 1304450 2 126 utg18_pilon exonerate:protein2genome:local gene 408065 408327 145 - . gene_id 0 ; sequence GL50803_31665-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 408065 408327 . - . utg18_pilon exonerate:protein2genome:local exon 408065 408327 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local similarity 408065 408327 145 - . alignment_id 0 ; Query GL50803_31665-t26_1-p1 ; Align 408328 1 108 ; Align 408218 38 153 utg18_pilon exonerate:protein2genome:local gene 420227 420661 497 - . gene_id 0 ; sequence GL50803_31667-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 420227 420661 . - . utg18_pilon exonerate:protein2genome:local exon 420227 420661 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 420227 420661 497 - . alignment_id 0 ; Query GL50803_31667-t26_1-p1 ; Align 420662 1 435 utg18_pilon exonerate:protein2genome:local gene 331563 332132 919 - . gene_id 0 ; sequence GL50803_31671-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 331563 332132 . - . utg18_pilon exonerate:protein2genome:local exon 331563 332132 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 331563 332132 919 - . alignment_id 0 ; Query GL50803_31671-t26_1-p1 ; Align 332133 1 570 utg18_pilon exonerate:protein2genome:local gene 353434 353783 278 - . gene_id 0 ; sequence GL50803_31672-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 353434 353783 . - . utg18_pilon exonerate:protein2genome:local exon 353434 353783 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local similarity 353434 353783 278 - . alignment_id 0 ; Query GL50803_31672-t26_1-p1 ; Align 353784 12 48 ; Align 353734 28 300 utg47_pilon exonerate:protein2genome:local gene 750425 750571 174 + . gene_id 0 ; sequence GL50803_31673-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 750425 750571 . + . utg47_pilon exonerate:protein2genome:local exon 750425 750571 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 750425 750571 174 + . alignment_id 0 ; Query GL50803_31673-t26_1-p1 ; Align 750425 1 147 utg47_pilon exonerate:protein2genome:local gene 758030 758398 320 - . gene_id 0 ; sequence GL50803_31675-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 758030 758398 . - . utg47_pilon exonerate:protein2genome:local exon 758030 758398 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 758030 758398 320 - . alignment_id 0 ; Query GL50803_31675-t26_1-p1 ; Align 758399 1 369 utg11_pilon exonerate:protein2genome:local gene 474329 474718 446 - . gene_id 0 ; sequence GL50803_31678-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 474329 474718 . - . utg11_pilon exonerate:protein2genome:local exon 474329 474718 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 474329 474718 446 - . alignment_id 0 ; Query GL50803_31678-t26_1-p1 ; Align 474719 1 390 utg47_pilon exonerate:protein2genome:local gene 869160 924028 186 - . gene_id 0 ; sequence GL50803_31679-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 923926 924028 . - . utg47_pilon exonerate:protein2genome:local exon 923926 924028 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 923924 923925 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 904059 923925 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 904059 904060 . - . intron_id 0 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local cds 904021 904058 . - . utg47_pilon exonerate:protein2genome:local exon 904021 904058 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 904019 904020 . - . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 869334 904020 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 869334 869335 . - . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 869160 869333 . - . utg47_pilon exonerate:protein2genome:local exon 869160 869333 . - . insertions 9 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 869160 924028 186 - . alignment_id 0 ; Query GL50803_31679-t26_1-p1 ; Align 924029 2 102 ; Align 904057 37 36 ; Align 869334 49 9 ; Align 869316 52 156 utg11_pilon exonerate:protein2genome:local gene 576567 576854 410 + . gene_id 0 ; sequence GL50803_31684-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 576567 576854 . + . utg11_pilon exonerate:protein2genome:local exon 576567 576854 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 576567 576854 410 + . alignment_id 0 ; Query GL50803_31684-t26_1-p1 ; Align 576567 1 288 utg47_pilon exonerate:protein2genome:local gene 885951 886207 193 - . gene_id 0 ; sequence GL50803_31687-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 885951 886207 . - . utg47_pilon exonerate:protein2genome:local exon 885951 886207 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 885951 886207 193 - . alignment_id 0 ; Query GL50803_31687-t26_1-p1 ; Align 886208 1 126 ; Align 886081 43 69 ; Align 886011 66 60 utg47_pilon exonerate:protein2genome:local gene 895707 895889 258 + . gene_id 0 ; sequence GL50803_31688-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 895707 895889 . + . utg47_pilon exonerate:protein2genome:local exon 895707 895889 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 895707 895889 258 + . alignment_id 0 ; Query GL50803_31688-t26_1-p1 ; Align 895707 1 183 utg349_pilon exonerate:protein2genome:local gene 1409277 1410959 2369 - . gene_id 0 ; sequence GL50803_3169-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1409277 1410959 . - . utg349_pilon exonerate:protein2genome:local exon 1409277 1410959 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 1409277 1410959 2369 - . alignment_id 0 ; Query GL50803_3169-t26_1-p1 ; Align 1410960 1 915 ; Align 1410045 307 636 ; Align 1409409 521 132 utg47_pilon exonerate:protein2genome:local gene 931553 931780 248 - . gene_id 0 ; sequence GL50803_31691-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 931553 931780 . - . utg47_pilon exonerate:protein2genome:local exon 931553 931780 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 931553 931780 248 - . alignment_id 0 ; Query GL50803_31691-t26_1-p1 ; Align 931781 2 228 utg47_pilon exonerate:protein2genome:local gene 933966 934320 444 - . gene_id 0 ; sequence GL50803_31692-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 933966 934320 . - . utg47_pilon exonerate:protein2genome:local exon 933966 934320 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 933966 934320 444 - . alignment_id 0 ; Query GL50803_31692-t26_1-p1 ; Align 934321 1 243 ; Align 934077 82 9 ; Align 934068 86 102 utg47_pilon exonerate:protein2genome:local gene 2029581 2029772 189 + . gene_id 0 ; sequence GL50803_31694-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2029581 2029772 . + . utg47_pilon exonerate:protein2genome:local exon 2029581 2029772 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2029581 2029772 189 + . alignment_id 0 ; Query GL50803_31694-t26_1-p1 ; Align 2029581 1 192 utg18_pilon exonerate:protein2genome:local gene 458851 459120 177 + . gene_id 0 ; sequence GL50803_31696-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 458851 459120 . + . utg18_pilon exonerate:protein2genome:local exon 458851 459120 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 458851 459120 177 + . alignment_id 0 ; Query GL50803_31696-t26_1-p1 ; Align 458851 1 270 utg731_pilon exonerate:protein2genome:local gene 726204 726488 231 - . gene_id 0 ; sequence GL50803_31704-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 726204 726488 . - . utg731_pilon exonerate:protein2genome:local exon 726204 726488 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 726204 726488 231 - . alignment_id 0 ; Query GL50803_31704-t26_1-p1 ; Align 726489 2 285 utg731_pilon exonerate:protein2genome:local gene 731530 731832 134 - . gene_id 0 ; sequence GL50803_31705-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 731530 731832 . - . utg731_pilon exonerate:protein2genome:local exon 731530 731832 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 731530 731832 134 - . alignment_id 0 ; Query GL50803_31705-t26_1-p1 ; Align 731833 1 303 utg731_pilon exonerate:protein2genome:local gene 739781 740083 511 - . gene_id 0 ; sequence GL50803_31706-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 739781 740083 . - . utg731_pilon exonerate:protein2genome:local exon 739781 740083 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 739781 740083 511 - . alignment_id 0 ; Query GL50803_31706-t26_1-p1 ; Align 740084 1 303 utg349_pilon exonerate:protein2genome:local gene 769991 770266 238 + . gene_id 0 ; sequence GL50803_31709-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 769991 770266 . + . utg349_pilon exonerate:protein2genome:local exon 769991 770266 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 769991 770266 238 + . alignment_id 0 ; Query GL50803_31709-t26_1-p1 ; Align 769991 4 33 ; Align 770024 16 243 utg349_pilon exonerate:protein2genome:local gene 1412147 1412638 883 - . gene_id 0 ; sequence GL50803_3171-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1412147 1412638 . - . utg349_pilon exonerate:protein2genome:local exon 1412147 1412638 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1412147 1412638 883 - . alignment_id 0 ; Query GL50803_3171-t26_1-p1 ; Align 1412639 1 492 utg64_pilon exonerate:protein2genome:local gene 316898 317188 249 + . gene_id 0 ; sequence GL50803_31732-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 316898 317188 . + . utg64_pilon exonerate:protein2genome:local exon 316898 317188 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 316898 317188 249 + . alignment_id 0 ; Query GL50803_31732-t26_1-p1 ; Align 316898 7 291 utg212_pilon exonerate:protein2genome:local gene 387520 388125 723 + . gene_id 0 ; sequence GL50803_31743-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 387520 388125 . + . utg212_pilon exonerate:protein2genome:local exon 387520 388125 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 387520 388125 723 + . alignment_id 0 ; Query GL50803_31743-t26_1-p1 ; Align 387520 1 606 utg212_pilon exonerate:protein2genome:local gene 384591 384848 237 + . gene_id 0 ; sequence GL50803_31744-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 384591 384848 . + . utg212_pilon exonerate:protein2genome:local exon 384591 384848 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 384591 384848 237 + . alignment_id 0 ; Query GL50803_31744-t26_1-p1 ; Align 384591 1 258 utg11_pilon exonerate:protein2genome:local gene 142132 142446 271 - . gene_id 0 ; sequence GL50803_31750-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 142132 142446 . - . utg11_pilon exonerate:protein2genome:local exon 142132 142446 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 142132 142446 271 - . alignment_id 0 ; Query GL50803_31750-t26_1-p1 ; Align 142447 1 315 utg11_pilon exonerate:protein2genome:local gene 144948 145428 642 - . gene_id 0 ; sequence GL50803_31751-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 144948 145428 . - . utg11_pilon exonerate:protein2genome:local exon 144948 145428 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 144948 145428 642 - . alignment_id 0 ; Query GL50803_31751-t26_1-p1 ; Align 145429 1 354 ; Align 145074 119 126 utg11_pilon exonerate:protein2genome:local gene 162960 163046 120 + . gene_id 0 ; sequence GL50803_31752-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 162960 163046 . + . utg11_pilon exonerate:protein2genome:local exon 162960 163046 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 162960 163046 120 + . alignment_id 0 ; Query GL50803_31752-t26_1-p1 ; Align 162960 1 87 utg47_pilon exonerate:protein2genome:local gene 2118137 2118367 214 - . gene_id 0 ; sequence GL50803_31757-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2118137 2118367 . - . utg47_pilon exonerate:protein2genome:local exon 2118137 2118367 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2118137 2118367 214 - . alignment_id 0 ; Query GL50803_31757-t26_1-p1 ; Align 2118368 1 231 utg731_pilon exonerate:protein2genome:local gene 302905 303537 882 + . gene_id 0 ; sequence GL50803_31762-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 302905 303537 . + . utg731_pilon exonerate:protein2genome:local exon 302905 303537 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 302905 303537 882 + . alignment_id 0 ; Query GL50803_31762-t26_1-p1 ; Align 302905 2 633 utg731_pilon exonerate:protein2genome:local gene 319201 319833 882 - . gene_id 0 ; sequence GL50803_31762-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 319201 319833 . - . utg731_pilon exonerate:protein2genome:local exon 319201 319833 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 319201 319833 882 - . alignment_id 0 ; Query GL50803_31762-t26_1-p1 ; Align 319834 2 633 utg1966_pilon exonerate:protein2genome:local gene 148860 149162 128 + . gene_id 0 ; sequence GL50803_31770-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 148860 149162 . + . utg1966_pilon exonerate:protein2genome:local exon 148860 149162 . + . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 148860 149162 128 + . alignment_id 0 ; Query GL50803_31770-t26_1-p1 ; Align 148860 1 303 utg349_pilon exonerate:protein2genome:local gene 220525 220671 132 - . gene_id 0 ; sequence GL50803_31773-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 220525 220671 . - . utg349_pilon exonerate:protein2genome:local exon 220525 220671 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 220525 220671 132 - . alignment_id 0 ; Query GL50803_31773-t26_1-p1 ; Align 220672 1 147 utg349_pilon exonerate:protein2genome:local gene 249828 250097 358 - . gene_id 0 ; sequence GL50803_31775-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 249828 250097 . - . utg349_pilon exonerate:protein2genome:local exon 249828 250097 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 249828 250097 358 - . alignment_id 0 ; Query GL50803_31775-t26_1-p1 ; Align 250098 1 270 utg212_pilon exonerate:protein2genome:local gene 456592 456834 282 - . gene_id 0 ; sequence GL50803_31780-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 456592 456834 . - . utg212_pilon exonerate:protein2genome:local exon 456592 456834 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 456592 456834 282 - . alignment_id 0 ; Query GL50803_31780-t26_1-p1 ; Align 456835 1 243 utg212_pilon exonerate:protein2genome:local gene 440273 440401 129 + . gene_id 0 ; sequence GL50803_31782-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 440273 440401 . + . utg212_pilon exonerate:protein2genome:local exon 440273 440401 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 440273 440401 129 + . alignment_id 0 ; Query GL50803_31782-t26_1-p1 ; Align 440273 50 129 utg212_pilon exonerate:protein2genome:local gene 438949 439674 804 - . gene_id 0 ; sequence GL50803_31783-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 438949 439674 . - . utg212_pilon exonerate:protein2genome:local exon 438949 439674 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 438949 439674 804 - . alignment_id 0 ; Query GL50803_31783-t26_1-p1 ; Align 439675 2 726 utg212_pilon exonerate:protein2genome:local gene 438797 439127 354 - . gene_id 0 ; sequence GL50803_31784-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 438797 439127 . - . utg212_pilon exonerate:protein2genome:local exon 438797 439127 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 438797 439127 354 - . alignment_id 0 ; Query GL50803_31784-t26_1-p1 ; Align 439128 1 246 ; Align 438881 83 84 utg212_pilon exonerate:protein2genome:local gene 431278 431611 274 + . gene_id 0 ; sequence GL50803_31787-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 431278 431611 . + . utg212_pilon exonerate:protein2genome:local exon 431278 431611 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 431278 431611 274 + . alignment_id 0 ; Query GL50803_31787-t26_1-p1 ; Align 431278 1 150 ; Align 431429 51 183 utg212_pilon exonerate:protein2genome:local gene 415220 415486 287 + . gene_id 0 ; sequence GL50803_31788-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 415220 415486 . + . utg212_pilon exonerate:protein2genome:local exon 415220 415486 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 415220 415486 287 + . alignment_id 0 ; Query GL50803_31788-t26_1-p1 ; Align 415220 1 267 utg64_pilon exonerate:protein2genome:local gene 527719 528012 380 - . gene_id 0 ; sequence GL50803_31789-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 527719 528012 . - . utg64_pilon exonerate:protein2genome:local exon 527719 528012 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 527719 528012 380 - . alignment_id 0 ; Query GL50803_31789-t26_1-p1 ; Align 528013 1 294 utg47_pilon exonerate:protein2genome:local gene 1189763 1189957 130 - . gene_id 0 ; sequence GL50803_31793-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1189763 1189957 . - . utg47_pilon exonerate:protein2genome:local exon 1189763 1189957 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1189763 1189957 130 - . alignment_id 0 ; Query GL50803_31793-t26_1-p1 ; Align 1189958 45 195 utg47_pilon exonerate:protein2genome:local gene 1640578 1640694 170 - . gene_id 0 ; sequence GL50803_31799-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1640578 1640694 . - . utg47_pilon exonerate:protein2genome:local exon 1640578 1640694 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1640578 1640694 170 - . alignment_id 0 ; Query GL50803_31799-t26_1-p1 ; Align 1640695 1 117 utg47_pilon exonerate:protein2genome:local gene 2066304 2067062 988 + . gene_id 0 ; sequence GL50803_3180-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2066304 2067062 . + . utg47_pilon exonerate:protein2genome:local exon 2066304 2067062 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2066304 2067062 988 + . alignment_id 0 ; Query GL50803_3180-t26_1-p1 ; Align 2066304 1 759 utg731_pilon exonerate:protein2genome:local gene 382939 383115 197 + . gene_id 0 ; sequence GL50803_31801-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 382939 383115 . + . utg731_pilon exonerate:protein2genome:local exon 382939 383115 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 382939 383115 197 + . alignment_id 0 ; Query GL50803_31801-t26_1-p1 ; Align 382939 1 177 utg731_pilon exonerate:protein2genome:local gene 361473 361925 447 + . gene_id 0 ; sequence GL50803_31802-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 361473 361925 . + . utg731_pilon exonerate:protein2genome:local exon 361473 361925 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 361473 361925 447 + . alignment_id 0 ; Query GL50803_31802-t26_1-p1 ; Align 361473 1 453 utg731_pilon exonerate:protein2genome:local gene 350316 350576 199 + . gene_id 0 ; sequence GL50803_31804-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 350316 350576 . + . utg731_pilon exonerate:protein2genome:local exon 350316 350576 . + . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 350316 350576 199 + . alignment_id 0 ; Query GL50803_31804-t26_1-p1 ; Align 350316 1 105 ; Align 350427 36 150 utg64_pilon exonerate:protein2genome:local gene 568844 569107 410 - . gene_id 0 ; sequence GL50803_31809-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 568844 569107 . - . utg64_pilon exonerate:protein2genome:local exon 568844 569107 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 568844 569107 410 - . alignment_id 0 ; Query GL50803_31809-t26_1-p1 ; Align 569108 1 264 utg64_pilon exonerate:protein2genome:local gene 569383 569703 261 + . gene_id 0 ; sequence GL50803_31810-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 569383 569703 . + . utg64_pilon exonerate:protein2genome:local exon 569383 569703 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 569383 569703 261 + . alignment_id 0 ; Query GL50803_31810-t26_1-p1 ; Align 569383 2 321 utg11_pilon exonerate:protein2genome:local gene 618762 619040 326 + . gene_id 0 ; sequence GL50803_31832-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 618762 619040 . + . utg11_pilon exonerate:protein2genome:local exon 618762 619040 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 618762 619040 326 + . alignment_id 0 ; Query GL50803_31832-t26_1-p1 ; Align 618762 1 279 utg11_pilon exonerate:protein2genome:local gene 611995 612519 538 - . gene_id 0 ; sequence GL50803_31833-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 611995 612519 . - . utg11_pilon exonerate:protein2genome:local exon 611995 612519 . - . insertions 0 ; deletions 7 utg11_pilon exonerate:protein2genome:local similarity 611995 612519 538 - . alignment_id 0 ; Query GL50803_31833-t26_1-p1 ; Align 612520 3 33 ; Align 612487 16 90 ; Align 612397 49 285 ; Align 612112 146 117 utg308_pilon exonerate:protein2genome:local gene 791721 791963 291 + . gene_id 0 ; sequence GL50803_31837-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 791721 791963 . + . utg308_pilon exonerate:protein2genome:local exon 791721 791963 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 791721 791963 291 + . alignment_id 0 ; Query GL50803_31837-t26_1-p1 ; Align 791721 1 243 utg731_pilon exonerate:protein2genome:local gene 578307 578751 207 - . gene_id 0 ; sequence GL50803_31839-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 578307 578751 . - . utg731_pilon exonerate:protein2genome:local exon 578307 578751 . - . insertions 6 ; deletions 0 ; frameshifts 7 utg731_pilon exonerate:protein2genome:local similarity 578307 578751 207 - . alignment_id 0 ; Query GL50803_31839-t26_1-p1 ; Align 578752 5 132 ; Align 578614 49 75 ; Align 578534 74 120 ; Align 578412 114 105 utg265_pilon exonerate:protein2genome:local gene 836812 837057 215 + . gene_id 0 ; sequence GL50803_31847-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 836812 837057 . + . utg265_pilon exonerate:protein2genome:local exon 836812 837057 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 836812 837057 215 + . alignment_id 0 ; Query GL50803_31847-t26_1-p1 ; Align 836812 1 246 utg308_pilon exonerate:protein2genome:local gene 267553 268149 700 + . gene_id 0 ; sequence GL50803_31854-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 267553 268149 . + . utg308_pilon exonerate:protein2genome:local exon 267553 268149 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 267553 268149 700 + . alignment_id 0 ; Query GL50803_31854-t26_1-p1 ; Align 267553 1 222 ; Align 267775 76 375 utg731_pilon exonerate:protein2genome:local gene 1099989 1100321 133 - . gene_id 0 ; sequence GL50803_3186-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1099989 1100321 . - . utg731_pilon exonerate:protein2genome:local exon 1099989 1100321 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1099989 1100321 133 - . alignment_id 0 ; Query GL50803_3186-t26_1-p1 ; Align 1100322 16 333 utg18_pilon exonerate:protein2genome:local gene 543130 543258 125 - . gene_id 0 ; sequence GL50803_31865-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 543130 543258 . - . utg18_pilon exonerate:protein2genome:local exon 543130 543258 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 543130 543258 125 - . alignment_id 0 ; Query GL50803_31865-t26_1-p1 ; Align 543259 12 129 utg18_pilon exonerate:protein2genome:local gene 541720 542058 447 + . gene_id 0 ; sequence GL50803_31866-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 541720 542058 . + . utg18_pilon exonerate:protein2genome:local exon 541720 542058 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 541720 542058 447 + . alignment_id 0 ; Query GL50803_31866-t26_1-p1 ; Align 541720 1 339 utg18_pilon exonerate:protein2genome:local gene 503741 503982 305 + . gene_id 0 ; sequence GL50803_31867-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 503741 503982 . + . utg18_pilon exonerate:protein2genome:local exon 503741 503982 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local similarity 503741 503982 305 + . alignment_id 0 ; Query GL50803_31867-t26_1-p1 ; Align 503741 1 96 ; Align 503839 33 144 utg64_pilon exonerate:protein2genome:local gene 403452 403712 297 - . gene_id 0 ; sequence GL50803_31870-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 403452 403712 . - . utg64_pilon exonerate:protein2genome:local exon 403452 403712 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 403452 403712 297 - . alignment_id 0 ; Query GL50803_31870-t26_1-p1 ; Align 403713 3 261 utg308_pilon exonerate:protein2genome:local gene 644383 644637 215 + . gene_id 0 ; sequence GL50803_31871-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 644383 644637 . + . utg308_pilon exonerate:protein2genome:local exon 644383 644637 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 644383 644637 215 + . alignment_id 0 ; Query GL50803_31871-t26_1-p1 ; Align 644383 5 255 utg308_pilon exonerate:protein2genome:local gene 681321 681599 307 - . gene_id 0 ; sequence GL50803_31873-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 681321 681599 . - . utg308_pilon exonerate:protein2genome:local exon 681321 681599 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 681321 681599 307 - . alignment_id 0 ; Query GL50803_31873-t26_1-p1 ; Align 681600 1 279 utg212_pilon exonerate:protein2genome:local gene 152677 152943 169 + . gene_id 0 ; sequence GL50803_31886-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 152677 152943 . + . utg212_pilon exonerate:protein2genome:local exon 152677 152943 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 152677 152943 169 + . alignment_id 0 ; Query GL50803_31886-t26_1-p1 ; Align 152677 3 267 utg349_pilon exonerate:protein2genome:local gene 75456 75707 347 + . gene_id 0 ; sequence GL50803_31889-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 75456 75707 . + . utg349_pilon exonerate:protein2genome:local exon 75456 75707 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 75456 75707 347 + . alignment_id 0 ; Query GL50803_31889-t26_1-p1 ; Align 75456 1 252 utg308_pilon exonerate:protein2genome:local gene 875631 875984 517 + . gene_id 0 ; sequence GL50803_31894-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 875631 875984 . + . utg308_pilon exonerate:protein2genome:local exon 875631 875984 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 875631 875984 517 + . alignment_id 0 ; Query GL50803_31894-t26_1-p1 ; Align 875631 1 354 utg308_pilon exonerate:protein2genome:local gene 847751 848188 497 + . gene_id 0 ; sequence GL50803_31897-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 847751 848188 . + . utg308_pilon exonerate:protein2genome:local exon 847751 848188 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 847751 848188 497 + . alignment_id 0 ; Query GL50803_31897-t26_1-p1 ; Align 847751 2 438 utg349_pilon exonerate:protein2genome:local gene 434632 434865 183 - . gene_id 0 ; sequence GL50803_31902-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 434632 434865 . - . utg349_pilon exonerate:protein2genome:local exon 434632 434865 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 434632 434865 183 - . alignment_id 0 ; Query GL50803_31902-t26_1-p1 ; Align 434866 1 234 utg349_pilon exonerate:protein2genome:local gene 434880 435230 573 - . gene_id 0 ; sequence GL50803_31903-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 434880 435230 . - . utg349_pilon exonerate:protein2genome:local exon 434880 435230 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 434880 435230 573 - . alignment_id 0 ; Query GL50803_31903-t26_1-p1 ; Align 435231 1 351 utg349_pilon exonerate:protein2genome:local gene 464614 465051 433 - . gene_id 0 ; sequence GL50803_31907-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 464614 465051 . - . utg349_pilon exonerate:protein2genome:local exon 464614 465051 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 464614 465051 433 - . alignment_id 0 ; Query GL50803_31907-t26_1-p1 ; Align 465052 4 438 utg349_pilon exonerate:protein2genome:local gene 472732 472938 286 - . gene_id 0 ; sequence GL50803_31908-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 472732 472938 . - . utg349_pilon exonerate:protein2genome:local exon 472732 472938 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 472732 472938 286 - . alignment_id 0 ; Query GL50803_31908-t26_1-p1 ; Align 472939 1 207 utg99_pilon exonerate:protein2genome:local gene 156340 156534 182 + . gene_id 0 ; sequence GL50803_31910-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 156340 156534 . + . utg99_pilon exonerate:protein2genome:local exon 156340 156534 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 156340 156534 182 + . alignment_id 0 ; Query GL50803_31910-t26_1-p1 ; Align 156340 2 195 utg99_pilon exonerate:protein2genome:local gene 155475 189830 147 + . gene_id 0 ; sequence GL50803_31911-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 155475 155671 . + . utg99_pilon exonerate:protein2genome:local exon 155475 155671 . + . insertions 0 ; deletions 4 utg99_pilon exonerate:protein2genome:local splice5 155672 155673 . + . intron_id 1 ; splice_site "GG" utg99_pilon exonerate:protein2genome:local intron 155672 189724 . + . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 189723 189724 . + . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 189725 189830 . + . utg99_pilon exonerate:protein2genome:local exon 189725 189830 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 155475 189830 147 + . alignment_id 0 ; Query GL50803_31911-t26_1-p1 ; Align 155475 42 141 ; Align 155616 93 54 ; Align 189726 112 105 utg11_pilon exonerate:protein2genome:local gene 641158 641718 574 + . gene_id 0 ; sequence GL50803_31913-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 641158 641718 . + . utg11_pilon exonerate:protein2genome:local exon 641158 641718 . + . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 641158 641718 574 + . alignment_id 0 ; Query GL50803_31913-t26_1-p1 ; Align 641158 1 474 ; Align 641638 159 81 utg11_pilon exonerate:protein2genome:local gene 1427119 1427265 156 - . gene_id 0 ; sequence GL50803_31914-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1427119 1427265 . - . utg11_pilon exonerate:protein2genome:local exon 1427119 1427265 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1427119 1427265 156 - . alignment_id 0 ; Query GL50803_31914-t26_1-p1 ; Align 1427266 1 147 utg731_pilon exonerate:protein2genome:local gene 339251 339488 207 + . gene_id 0 ; sequence GL50803_31918-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 339251 339488 . + . utg731_pilon exonerate:protein2genome:local exon 339251 339488 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 339251 339488 207 + . alignment_id 0 ; Query GL50803_31918-t26_1-p1 ; Align 339251 6 60 ; Align 339312 26 177 utg731_pilon exonerate:protein2genome:local gene 332204 332441 207 - . gene_id 0 ; sequence GL50803_31918-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 332204 332441 . - . utg731_pilon exonerate:protein2genome:local exon 332204 332441 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 332204 332441 207 - . alignment_id 0 ; Query GL50803_31918-t26_1-p1 ; Align 332442 6 60 ; Align 332381 26 177 utg18_pilon exonerate:protein2genome:local gene 150931 151239 324 - . gene_id 0 ; sequence GL50803_31928-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 150931 151239 . - . utg18_pilon exonerate:protein2genome:local exon 150931 151239 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 150931 151239 324 - . alignment_id 0 ; Query GL50803_31928-t26_1-p1 ; Align 151240 15 309 utg18_pilon exonerate:protein2genome:local gene 161121 161264 161 + . gene_id 0 ; sequence GL50803_31929-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 161121 161264 . + . utg18_pilon exonerate:protein2genome:local exon 161121 161264 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 161121 161264 161 + . alignment_id 0 ; Query GL50803_31929-t26_1-p1 ; Align 161121 10 144 utg18_pilon exonerate:protein2genome:local gene 170181 170441 281 + . gene_id 0 ; sequence GL50803_31930-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 170181 170441 . + . utg18_pilon exonerate:protein2genome:local exon 170181 170441 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 170181 170441 281 + . alignment_id 0 ; Query GL50803_31930-t26_1-p1 ; Align 170181 1 261 utg18_pilon exonerate:protein2genome:local gene 241413 241721 366 - . gene_id 0 ; sequence GL50803_31932-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 241413 241721 . - . utg18_pilon exonerate:protein2genome:local exon 241413 241721 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 241413 241721 366 - . alignment_id 0 ; Query GL50803_31932-t26_1-p1 ; Align 241722 1 309 utg18_pilon exonerate:protein2genome:local gene 217813 218010 224 + . gene_id 0 ; sequence GL50803_31933-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 217813 218010 . + . utg18_pilon exonerate:protein2genome:local exon 217813 218010 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 217813 218010 224 + . alignment_id 0 ; Query GL50803_31933-t26_1-p1 ; Align 217813 14 198 utg64_pilon exonerate:protein2genome:local gene 765149 819893 177 - . gene_id 0 ; sequence GL50803_31936-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 819859 819893 . - . utg64_pilon exonerate:protein2genome:local exon 819859 819893 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 819857 819858 . - . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 765291 819858 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 765291 765292 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 765149 765290 . - . utg64_pilon exonerate:protein2genome:local exon 765149 765290 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 765149 819893 177 - . alignment_id 0 ; Query GL50803_31936-t26_1-p1 ; Align 819894 5 33 ; Align 765290 17 141 utg731_pilon exonerate:protein2genome:local gene 170505 170750 336 - . gene_id 0 ; sequence GL50803_31943-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 170505 170750 . - . utg731_pilon exonerate:protein2genome:local exon 170505 170750 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 170505 170750 336 - . alignment_id 0 ; Query GL50803_31943-t26_1-p1 ; Align 170751 1 246 utg731_pilon exonerate:protein2genome:local gene 201381 201800 419 + . gene_id 0 ; sequence GL50803_31945-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 201381 201800 . + . utg731_pilon exonerate:protein2genome:local exon 201381 201800 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 201381 201800 419 + . alignment_id 0 ; Query GL50803_31945-t26_1-p1 ; Align 201381 1 420 utg731_pilon exonerate:protein2genome:local gene 201879 202235 267 + . gene_id 0 ; sequence GL50803_31946-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 201879 202235 . + . utg731_pilon exonerate:protein2genome:local exon 201879 202235 . + . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 201879 202235 267 + . alignment_id 0 ; Query GL50803_31946-t26_1-p1 ; Align 201879 2 66 ; Align 201948 24 27 ; Align 201978 33 258 utg64_pilon exonerate:protein2genome:local gene 713217 713384 196 + . gene_id 0 ; sequence GL50803_31952-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 713217 713384 . + . utg64_pilon exonerate:protein2genome:local exon 713217 713384 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 713217 713384 196 + . alignment_id 0 ; Query GL50803_31952-t26_1-p1 ; Align 713217 1 168 utg731_pilon exonerate:protein2genome:local gene 943615 943827 300 - . gene_id 0 ; sequence GL50803_31953-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 943615 943827 . - . utg731_pilon exonerate:protein2genome:local exon 943615 943827 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 943615 943827 300 - . alignment_id 0 ; Query GL50803_31953-t26_1-p1 ; Align 943828 1 213 utg731_pilon exonerate:protein2genome:local gene 944069 944350 390 - . gene_id 0 ; sequence GL50803_31954-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 944069 944350 . - . utg731_pilon exonerate:protein2genome:local exon 944069 944350 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 944069 944350 390 - . alignment_id 0 ; Query GL50803_31954-t26_1-p1 ; Align 944351 2 282 utg731_pilon exonerate:protein2genome:local gene 944212 944511 252 + . gene_id 0 ; sequence GL50803_31955-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 944212 944511 . + . utg731_pilon exonerate:protein2genome:local exon 944212 944511 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 944212 944511 252 + . alignment_id 0 ; Query GL50803_31955-t26_1-p1 ; Align 944212 1 300 utg731_pilon exonerate:protein2genome:local gene 970939 971316 240 - . gene_id 0 ; sequence GL50803_31956-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 970939 971316 . - . utg731_pilon exonerate:protein2genome:local exon 970939 971316 . - . insertions 3 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 970939 971316 240 - . alignment_id 0 ; Query GL50803_31956-t26_1-p1 ; Align 971317 1 42 ; Align 971275 17 51 ; Align 971221 34 282 utg731_pilon exonerate:protein2genome:local gene 979587 979739 251 - . gene_id 0 ; sequence GL50803_31957-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 979587 979739 . - . utg731_pilon exonerate:protein2genome:local exon 979587 979739 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 979587 979739 251 - . alignment_id 0 ; Query GL50803_31957-t26_1-p1 ; Align 979740 2 153 utg47_pilon exonerate:protein2genome:local gene 1128882 1129226 354 - . gene_id 0 ; sequence GL50803_31964-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1128882 1129226 . - . utg47_pilon exonerate:protein2genome:local exon 1128882 1129226 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1128882 1129226 354 - . alignment_id 0 ; Query GL50803_31964-t26_1-p1 ; Align 1129227 2 150 ; Align 1129077 54 195 utg47_pilon exonerate:protein2genome:local gene 1121012 1121257 232 - . gene_id 0 ; sequence GL50803_31965-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1121012 1121257 . - . utg47_pilon exonerate:protein2genome:local exon 1121012 1121257 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1121012 1121257 232 - . alignment_id 0 ; Query GL50803_31965-t26_1-p1 ; Align 1121258 1 246 utg47_pilon exonerate:protein2genome:local gene 1107121 1107447 221 + . gene_id 0 ; sequence GL50803_31966-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1107121 1107447 . + . utg47_pilon exonerate:protein2genome:local exon 1107121 1107447 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1107121 1107447 221 + . alignment_id 0 ; Query GL50803_31966-t26_1-p1 ; Align 1107121 1 327 utg47_pilon exonerate:protein2genome:local gene 1103418 1103753 411 - . gene_id 0 ; sequence GL50803_31967-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1103418 1103753 . - . utg47_pilon exonerate:protein2genome:local exon 1103418 1103753 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1103418 1103753 411 - . alignment_id 0 ; Query GL50803_31967-t26_1-p1 ; Align 1103754 1 336 utg731_pilon exonerate:protein2genome:local gene 1261486 1261718 154 + . gene_id 0 ; sequence GL50803_31970-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1261486 1261718 . + . utg731_pilon exonerate:protein2genome:local exon 1261486 1261718 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 1261486 1261718 154 + . alignment_id 0 ; Query GL50803_31970-t26_1-p1 ; Align 1261486 1 114 ; Align 1261602 39 117 utg731_pilon exonerate:protein2genome:local gene 1272856 1273149 239 + . gene_id 0 ; sequence GL50803_31974-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1272856 1273149 . + . utg731_pilon exonerate:protein2genome:local exon 1272856 1273149 . + . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1272856 1273149 239 + . alignment_id 0 ; Query GL50803_31974-t26_1-p1 ; Align 1272856 1 138 ; Align 1273003 47 147 utg99_pilon exonerate:protein2genome:local gene 484271 489220 5944 - . gene_id 0 ; sequence GL50803_31978-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 484271 489220 . - . utg99_pilon exonerate:protein2genome:local exon 484271 489220 . - . insertions 3 ; deletions 8 utg99_pilon exonerate:protein2genome:local similarity 484271 489220 5944 - . alignment_id 0 ; Query GL50803_31978-t26_1-p1 ; Align 489221 7 741 ; Align 488480 255 261 ; Align 488219 343 861 ; Align 487358 631 2019 ; Align 485339 1305 363 ; Align 484973 1426 453 ; Align 484520 1579 9 ; Align 484511 1584 240 utg99_pilon exonerate:protein2genome:local gene 524042 524377 388 + . gene_id 0 ; sequence GL50803_31982-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 524042 524377 . + . utg99_pilon exonerate:protein2genome:local exon 524042 524377 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 524042 524377 388 + . alignment_id 0 ; Query GL50803_31982-t26_1-p1 ; Align 524042 2 336 utg99_pilon exonerate:protein2genome:local gene 520079 520255 182 - . gene_id 0 ; sequence GL50803_31983-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 520079 520255 . - . utg99_pilon exonerate:protein2genome:local exon 520079 520255 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 520079 520255 182 - . alignment_id 0 ; Query GL50803_31983-t26_1-p1 ; Align 520256 28 177 utg99_pilon exonerate:protein2genome:local gene 518886 519080 263 + . gene_id 0 ; sequence GL50803_31984-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 518886 519080 . + . utg99_pilon exonerate:protein2genome:local exon 518886 519080 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 518886 519080 263 + . alignment_id 0 ; Query GL50803_31984-t26_1-p1 ; Align 518886 1 195 utg731_pilon exonerate:protein2genome:local gene 85543 85757 188 - . gene_id 0 ; sequence GL50803_31987-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 85543 85757 . - . utg731_pilon exonerate:protein2genome:local exon 85543 85757 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 85543 85757 188 - . alignment_id 0 ; Query GL50803_31987-t26_1-p1 ; Align 85758 1 168 ; Align 85588 58 45 utg47_pilon exonerate:protein2genome:local gene 1753207 1753341 171 - . gene_id 0 ; sequence GL50803_31989-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1753207 1753341 . - . utg47_pilon exonerate:protein2genome:local exon 1753207 1753341 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1753207 1753341 171 - . alignment_id 0 ; Query GL50803_31989-t26_1-p1 ; Align 1753342 1 135 utg349_pilon exonerate:protein2genome:local gene 1218975 1316967 230 + . gene_id 0 ; sequence GL50803_31990-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1218975 1219116 . + . utg349_pilon exonerate:protein2genome:local exon 1218975 1219116 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1219117 1219118 . + . intron_id 1 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 1219117 1316782 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1316781 1316782 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1316783 1316967 . + . utg349_pilon exonerate:protein2genome:local exon 1316783 1316967 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1218975 1316967 230 + . alignment_id 0 ; Query GL50803_31990-t26_1-p1 ; Align 1218975 31 141 ; Align 1316785 79 183 utg47_pilon exonerate:protein2genome:local gene 1711727 1712005 294 + . gene_id 0 ; sequence GL50803_31994-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1711727 1712005 . + . utg47_pilon exonerate:protein2genome:local exon 1711727 1712005 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1711727 1712005 294 + . alignment_id 0 ; Query GL50803_31994-t26_1-p1 ; Align 1711727 1 279 utg11_pilon exonerate:protein2genome:local gene 530985 531314 327 + . gene_id 0 ; sequence GL50803_31996-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 530985 531314 . + . utg11_pilon exonerate:protein2genome:local exon 530985 531314 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 530985 531314 327 + . alignment_id 0 ; Query GL50803_31996-t26_1-p1 ; Align 530985 2 330 utg11_pilon exonerate:protein2genome:local gene 518629 521145 3498 + . gene_id 0 ; sequence GL50803_31998-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 518629 521145 . + . utg11_pilon exonerate:protein2genome:local exon 518629 521145 . + . insertions 3 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 518629 521145 3498 + . alignment_id 0 ; Query GL50803_31998-t26_1-p1 ; Align 518629 1 219 ; Align 518848 77 693 ; Align 519544 308 1602 utg11_pilon exonerate:protein2genome:local gene 499074 499556 629 + . gene_id 0 ; sequence GL50803_32000-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 499074 499556 . + . utg11_pilon exonerate:protein2genome:local exon 499074 499556 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 499074 499556 629 + . alignment_id 0 ; Query GL50803_32000-t26_1-p1 ; Align 499074 1 483 utg11_pilon exonerate:protein2genome:local gene 436279 436593 375 - . gene_id 0 ; sequence GL50803_32002-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 436279 436593 . - . utg11_pilon exonerate:protein2genome:local exon 436279 436593 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 436279 436593 375 - . alignment_id 0 ; Query GL50803_32002-t26_1-p1 ; Align 436594 1 315 utg11_pilon exonerate:protein2genome:local gene 433602 433976 572 + . gene_id 0 ; sequence GL50803_32003-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 433602 433976 . + . utg11_pilon exonerate:protein2genome:local exon 433602 433976 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 433602 433976 572 + . alignment_id 0 ; Query GL50803_32003-t26_1-p1 ; Align 433602 33 375 utg212_pilon exonerate:protein2genome:local gene 84371 84726 263 + . gene_id 0 ; sequence GL50803_32008-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 84371 84726 . + . utg212_pilon exonerate:protein2genome:local exon 84371 84726 . + . insertions 0 ; deletions 4 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 84371 84726 263 + . alignment_id 0 ; Query GL50803_32008-t26_1-p1 ; Align 84371 2 192 ; Align 84565 66 27 ; Align 84592 76 54 ; Align 84646 97 81 utg99_pilon exonerate:protein2genome:local gene 111624 111890 273 + . gene_id 0 ; sequence GL50803_32018-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 111624 111890 . + . utg99_pilon exonerate:protein2genome:local exon 111624 111890 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 111624 111890 273 + . alignment_id 0 ; Query GL50803_32018-t26_1-p1 ; Align 111624 20 267 utg99_pilon exonerate:protein2genome:local gene 381493 381753 367 - . gene_id 0 ; sequence GL50803_3202-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 381493 381753 . - . utg99_pilon exonerate:protein2genome:local exon 381493 381753 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 381493 381753 367 - . alignment_id 0 ; Query GL50803_3202-t26_1-p1 ; Align 381754 1 261 utg99_pilon exonerate:protein2genome:local gene 61196 61762 813 - . gene_id 0 ; sequence GL50803_32020-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 61196 61762 . - . utg99_pilon exonerate:protein2genome:local exon 61196 61762 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 61196 61762 813 - . alignment_id 0 ; Query GL50803_32020-t26_1-p1 ; Align 61763 1 567 utg349_pilon exonerate:protein2genome:local gene 285888 286028 144 - . gene_id 0 ; sequence GL50803_32027-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 285888 286028 . - . utg349_pilon exonerate:protein2genome:local exon 285888 286028 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 285888 286028 144 - . alignment_id 0 ; Query GL50803_32027-t26_1-p1 ; Align 286029 1 141 utg349_pilon exonerate:protein2genome:local gene 286411 286797 315 + . gene_id 0 ; sequence GL50803_32028-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 286411 286797 . + . utg349_pilon exonerate:protein2genome:local exon 286411 286797 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 286411 286797 315 + . alignment_id 0 ; Query GL50803_32028-t26_1-p1 ; Align 286411 1 387 utg349_pilon exonerate:protein2genome:local gene 287108 287413 291 + . gene_id 0 ; sequence GL50803_32029-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 287108 287413 . + . utg349_pilon exonerate:protein2genome:local exon 287108 287413 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 287108 287413 291 + . alignment_id 0 ; Query GL50803_32029-t26_1-p1 ; Align 287108 5 306 utg349_pilon exonerate:protein2genome:local gene 292116 292460 284 + . gene_id 0 ; sequence GL50803_32030-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 292116 292460 . + . utg349_pilon exonerate:protein2genome:local exon 292116 292460 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 292116 292460 284 + . alignment_id 0 ; Query GL50803_32030-t26_1-p1 ; Align 292116 5 345 utg47_pilon exonerate:protein2genome:local gene 2273550 2273807 120 + . gene_id 0 ; sequence GL50803_32032-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2273550 2273807 . + . utg47_pilon exonerate:protein2genome:local exon 2273550 2273807 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2273550 2273807 120 + . alignment_id 0 ; Query GL50803_32032-t26_1-p1 ; Align 2273550 1 99 ; Align 2273652 34 156 utg99_pilon exonerate:protein2genome:local gene 203768 204047 177 - . gene_id 0 ; sequence GL50803_32035-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 203768 204047 . - . utg99_pilon exonerate:protein2genome:local exon 203768 204047 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg99_pilon exonerate:protein2genome:local similarity 203768 204047 177 - . alignment_id 0 ; Query GL50803_32035-t26_1-p1 ; Align 204048 1 126 ; Align 203922 44 39 ; Align 203882 57 114 utg99_pilon exonerate:protein2genome:local gene 203708 204049 202 + . gene_id 0 ; sequence GL50803_32036-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 203708 204049 . + . utg99_pilon exonerate:protein2genome:local exon 203708 204049 . + . insertions 0 ; deletions 2 ; frameshifts 6 utg99_pilon exonerate:protein2genome:local similarity 203708 204049 202 + . alignment_id 0 ; Query GL50803_32036-t26_1-p1 ; Align 203708 8 66 ; Align 203776 30 84 ; Align 203862 58 6 ; Align 203868 61 60 ; Align 203930 82 120 utg99_pilon exonerate:protein2genome:local gene 201751 202011 354 + . gene_id 0 ; sequence GL50803_32037-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 201751 202011 . + . utg99_pilon exonerate:protein2genome:local exon 201751 202011 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 201751 202011 354 + . alignment_id 0 ; Query GL50803_32037-t26_1-p1 ; Align 201751 1 261 utg99_pilon exonerate:protein2genome:local gene 466285 466785 689 - . gene_id 0 ; sequence GL50803_32041-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 466285 466785 . - . utg99_pilon exonerate:protein2genome:local exon 466285 466785 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 466285 466785 689 - . alignment_id 0 ; Query GL50803_32041-t26_1-p1 ; Align 466786 1 501 utg99_pilon exonerate:protein2genome:local gene 457985 458203 227 + . gene_id 0 ; sequence GL50803_32042-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 457985 458203 . + . utg99_pilon exonerate:protein2genome:local exon 457985 458203 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 457985 458203 227 + . alignment_id 0 ; Query GL50803_32042-t26_1-p1 ; Align 457985 49 219 utg99_pilon exonerate:protein2genome:local gene 453846 454202 405 - . gene_id 0 ; sequence GL50803_32044-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 453846 454202 . - . utg99_pilon exonerate:protein2genome:local exon 453846 454202 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 453846 454202 405 - . alignment_id 0 ; Query GL50803_32044-t26_1-p1 ; Align 454203 1 357 utg99_pilon exonerate:protein2genome:local gene 451710 451961 247 - . gene_id 0 ; sequence GL50803_32045-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 451710 451961 . - . utg99_pilon exonerate:protein2genome:local exon 451710 451961 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 451710 451961 247 - . alignment_id 0 ; Query GL50803_32045-t26_1-p1 ; Align 451962 12 252 utg11_pilon exonerate:protein2genome:local gene 813230 813545 150 + . gene_id 0 ; sequence GL50803_32049-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 813230 813545 . + . utg11_pilon exonerate:protein2genome:local exon 813230 813545 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 813230 813545 150 + . alignment_id 0 ; Query GL50803_32049-t26_1-p1 ; Align 813230 1 75 ; Align 813306 26 6 ; Align 813312 29 234 utg11_pilon exonerate:protein2genome:local gene 787712 787951 254 + . gene_id 0 ; sequence GL50803_32051-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 787712 787951 . + . utg11_pilon exonerate:protein2genome:local exon 787712 787951 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 787712 787951 254 + . alignment_id 0 ; Query GL50803_32051-t26_1-p1 ; Align 787712 1 240 utg11_pilon exonerate:protein2genome:local gene 779010 779195 239 + . gene_id 0 ; sequence GL50803_32052-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 779010 779195 . + . utg11_pilon exonerate:protein2genome:local exon 779010 779195 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 779010 779195 239 + . alignment_id 0 ; Query GL50803_32052-t26_1-p1 ; Align 779010 26 186 utg731_pilon exonerate:protein2genome:local gene 1375828 1377783 3069 + . gene_id 0 ; sequence GL50803_3206-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1375828 1377783 . + . utg731_pilon exonerate:protein2genome:local exon 1375828 1377783 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1375828 1377783 3069 + . alignment_id 0 ; Query GL50803_3206-t26_1-p1 ; Align 1375828 1 1656 ; Align 1377484 555 300 utg731_pilon exonerate:protein2genome:local gene 273938 274553 791 - . gene_id 0 ; sequence GL50803_32069-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 273938 274553 . - . utg731_pilon exonerate:protein2genome:local exon 273938 274553 . - . insertions 0 ; deletions 1 ; frameshifts 4 utg731_pilon exonerate:protein2genome:local similarity 273938 274553 791 - . alignment_id 0 ; Query GL50803_32069-t26_1-p1 ; Align 274554 1 129 ; Align 274421 44 30 ; Align 274391 55 453 utg731_pilon exonerate:protein2genome:local gene 271449 271682 154 + . gene_id 0 ; sequence GL50803_32070-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 271449 271682 . + . utg731_pilon exonerate:protein2genome:local exon 271449 271682 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 271449 271682 154 + . alignment_id 0 ; Query GL50803_32070-t26_1-p1 ; Align 271449 2 234 utg731_pilon exonerate:protein2genome:local gene 228962 229277 290 - . gene_id 0 ; sequence GL50803_32073-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 228962 229277 . - . utg731_pilon exonerate:protein2genome:local exon 228962 229277 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 228962 229277 290 - . alignment_id 0 ; Query GL50803_32073-t26_1-p1 ; Align 229278 4 57 ; Align 229220 23 258 utg47_pilon exonerate:protein2genome:local gene 660688 660871 146 + . gene_id 0 ; sequence GL50803_32078-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 660688 660871 . + . utg47_pilon exonerate:protein2genome:local exon 660688 660871 . + . insertions 0 ; deletions 0 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 660688 660871 146 + . alignment_id 0 ; Query GL50803_32078-t26_1-p1 ; Align 660688 1 111 ; Align 660803 38 69 utg47_pilon exonerate:protein2genome:local gene 660590 660721 188 - . gene_id 0 ; sequence GL50803_32079-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 660590 660721 . - . utg47_pilon exonerate:protein2genome:local exon 660590 660721 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 660590 660721 188 - . alignment_id 0 ; Query GL50803_32079-t26_1-p1 ; Align 660722 1 132 utg47_pilon exonerate:protein2genome:local gene 661051 661410 235 + . gene_id 0 ; sequence GL50803_32080-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 661051 661410 . + . utg47_pilon exonerate:protein2genome:local exon 661051 661410 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 661051 661410 235 + . alignment_id 0 ; Query GL50803_32080-t26_1-p1 ; Align 661051 5 360 utg47_pilon exonerate:protein2genome:local gene 692104 692487 429 + . gene_id 0 ; sequence GL50803_32084-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 692104 692487 . + . utg47_pilon exonerate:protein2genome:local exon 692104 692487 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 692104 692487 429 + . alignment_id 0 ; Query GL50803_32084-t26_1-p1 ; Align 692104 2 384 utg47_pilon exonerate:protein2genome:local gene 699308 699589 271 + . gene_id 0 ; sequence GL50803_32085-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 699308 699589 . + . utg47_pilon exonerate:protein2genome:local exon 699308 699589 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 699308 699589 271 + . alignment_id 0 ; Query GL50803_32085-t26_1-p1 ; Align 699308 3 282 utg11_pilon exonerate:protein2genome:local gene 620990 621613 1054 + . gene_id 0 ; sequence GL50803_3209-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 620990 621613 . + . utg11_pilon exonerate:protein2genome:local exon 620990 621613 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 620990 621613 1054 + . alignment_id 0 ; Query GL50803_3209-t26_1-p1 ; Align 620990 1 624 utg47_pilon exonerate:protein2genome:local gene 1338569 1338793 288 - . gene_id 0 ; sequence GL50803_32091-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1338569 1338793 . - . utg47_pilon exonerate:protein2genome:local exon 1338569 1338793 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1338569 1338793 288 - . alignment_id 0 ; Query GL50803_32091-t26_1-p1 ; Align 1338794 6 225 utg47_pilon exonerate:protein2genome:local gene 1273997 1274275 303 + . gene_id 0 ; sequence GL50803_32094-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1273997 1274275 . + . utg47_pilon exonerate:protein2genome:local exon 1273997 1274275 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1273997 1274275 303 + . alignment_id 0 ; Query GL50803_32094-t26_1-p1 ; Align 1273997 9 279 utg47_pilon exonerate:protein2genome:local gene 1249728 1249886 132 - . gene_id 0 ; sequence GL50803_32095-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1249728 1249886 . - . utg47_pilon exonerate:protein2genome:local exon 1249728 1249886 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1249728 1249886 132 - . alignment_id 0 ; Query GL50803_32095-t26_1-p1 ; Align 1249887 1 90 ; Align 1249794 31 66 utg11_pilon exonerate:protein2genome:local gene 1329277 1329774 618 - . gene_id 0 ; sequence GL50803_32097-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1329277 1329774 . - . utg11_pilon exonerate:protein2genome:local exon 1329277 1329774 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1329277 1329774 618 - . alignment_id 0 ; Query GL50803_32097-t26_1-p1 ; Align 1329775 2 498 utg11_pilon exonerate:protein2genome:local gene 1305579 1305877 337 + . gene_id 0 ; sequence GL50803_32099-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1305579 1305877 . + . utg11_pilon exonerate:protein2genome:local exon 1305579 1305877 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 1305579 1305877 337 + . alignment_id 0 ; Query GL50803_32099-t26_1-p1 ; Align 1305579 1 252 ; Align 1305833 85 45 utg11_pilon exonerate:protein2genome:local gene 1273680 1273889 236 - . gene_id 0 ; sequence GL50803_32102-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1273680 1273889 . - . utg11_pilon exonerate:protein2genome:local exon 1273680 1273889 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1273680 1273889 236 - . alignment_id 0 ; Query GL50803_32102-t26_1-p1 ; Align 1273890 3 210 utg47_pilon exonerate:protein2genome:local gene 1944185 1944372 163 - . gene_id 0 ; sequence GL50803_32103-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1944185 1944372 . - . utg47_pilon exonerate:protein2genome:local exon 1944185 1944372 . - . insertions 3 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1944185 1944372 163 - . alignment_id 0 ; Query GL50803_32103-t26_1-p1 ; Align 1944373 1 90 ; Align 1944280 31 48 ; Align 1944230 48 45 utg11_pilon exonerate:protein2genome:local gene 1169483 1169713 172 - . gene_id 0 ; sequence GL50803_32107-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1169483 1169713 . - . utg11_pilon exonerate:protein2genome:local exon 1169483 1169713 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1169483 1169713 172 - . alignment_id 0 ; Query GL50803_32107-t26_1-p1 ; Align 1169714 68 231 utg47_pilon exonerate:protein2genome:local gene 909500 909730 172 - . gene_id 0 ; sequence GL50803_32107-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 909500 909730 . - . utg47_pilon exonerate:protein2genome:local exon 909500 909730 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 909500 909730 172 - . alignment_id 0 ; Query GL50803_32107-t26_1-p1 ; Align 909731 68 231 utg11_pilon exonerate:protein2genome:local gene 1195419 1195643 218 - . gene_id 0 ; sequence GL50803_32108-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1195419 1195643 . - . utg11_pilon exonerate:protein2genome:local exon 1195419 1195643 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1195419 1195643 218 - . alignment_id 0 ; Query GL50803_32108-t26_1-p1 ; Align 1195644 1 225 utg11_pilon exonerate:protein2genome:local gene 1224411 1224866 456 - . gene_id 0 ; sequence GL50803_32109-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1224411 1224866 . - . utg11_pilon exonerate:protein2genome:local exon 1224411 1224866 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1224411 1224866 456 - . alignment_id 0 ; Query GL50803_32109-t26_1-p1 ; Align 1224867 1 456 utg11_pilon exonerate:protein2genome:local gene 617407 618780 1990 + . gene_id 0 ; sequence GL50803_3211-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 617407 618780 . + . utg11_pilon exonerate:protein2genome:local exon 617407 618780 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 617407 618780 1990 + . alignment_id 0 ; Query GL50803_3211-t26_1-p1 ; Align 617407 1 966 ; Align 618376 323 405 utg47_pilon exonerate:protein2genome:local gene 2239238 2239579 417 - . gene_id 0 ; sequence GL50803_32125-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2239238 2239579 . - . utg47_pilon exonerate:protein2genome:local exon 2239238 2239579 . - . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2239238 2239579 417 - . alignment_id 0 ; Query GL50803_32125-t26_1-p1 ; Align 2239580 1 117 ; Align 2239457 40 219 utg47_pilon exonerate:protein2genome:local gene 2235884 2236231 187 + . gene_id 0 ; sequence GL50803_32128-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2235884 2236231 . + . utg47_pilon exonerate:protein2genome:local exon 2235884 2236231 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2235884 2236231 187 + . alignment_id 0 ; Query GL50803_32128-t26_1-p1 ; Align 2235884 38 348 utg47_pilon exonerate:protein2genome:local gene 2166192 2166566 360 - . gene_id 0 ; sequence GL50803_32134-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2166192 2166566 . - . utg47_pilon exonerate:protein2genome:local exon 2166192 2166566 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2166192 2166566 360 - . alignment_id 0 ; Query GL50803_32134-t26_1-p1 ; Align 2166567 1 375 utg731_pilon exonerate:protein2genome:local gene 859772 859978 292 - . gene_id 0 ; sequence GL50803_32137-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 859772 859978 . - . utg731_pilon exonerate:protein2genome:local exon 859772 859978 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 859772 859978 292 - . alignment_id 0 ; Query GL50803_32137-t26_1-p1 ; Align 859979 1 207 utg731_pilon exonerate:protein2genome:local gene 882411 882545 202 - . gene_id 0 ; sequence GL50803_32139-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 882411 882545 . - . utg731_pilon exonerate:protein2genome:local exon 882411 882545 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 882411 882545 202 - . alignment_id 0 ; Query GL50803_32139-t26_1-p1 ; Align 882546 1 135 utg731_pilon exonerate:protein2genome:local gene 883590 883955 457 - . gene_id 0 ; sequence GL50803_32140-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 883590 883955 . - . utg731_pilon exonerate:protein2genome:local exon 883590 883955 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 883590 883955 457 - . alignment_id 0 ; Query GL50803_32140-t26_1-p1 ; Align 883956 1 366 utg265_pilon exonerate:protein2genome:local gene 518752 519120 256 + . gene_id 0 ; sequence GL50803_32144-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 518752 519120 . + . utg265_pilon exonerate:protein2genome:local exon 518752 519120 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 518752 519120 256 + . alignment_id 0 ; Query GL50803_32144-t26_1-p1 ; Align 518752 1 369 utg265_pilon exonerate:protein2genome:local gene 473178 473441 442 - . gene_id 0 ; sequence GL50803_32146-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 473178 473441 . - . utg265_pilon exonerate:protein2genome:local exon 473178 473441 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 473178 473441 442 - . alignment_id 0 ; Query GL50803_32146-t26_1-p1 ; Align 473442 3 264 utg265_pilon exonerate:protein2genome:local gene 450085 450303 214 - . gene_id 0 ; sequence GL50803_32148-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 450085 450303 . - . utg265_pilon exonerate:protein2genome:local exon 450085 450303 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 450085 450303 214 - . alignment_id 0 ; Query GL50803_32148-t26_1-p1 ; Align 450304 21 219 utg64_pilon exonerate:protein2genome:local gene 214951 215064 103 + . gene_id 0 ; sequence GL50803_32155-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 214951 215064 . + . utg64_pilon exonerate:protein2genome:local exon 214951 215064 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 214951 215064 103 + . alignment_id 0 ; Query GL50803_32155-t26_1-p1 ; Align 214951 21 114 utg265_pilon exonerate:protein2genome:local gene 1057747 1084701 103 - . gene_id 0 ; sequence GL50803_32155-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 1084587 1084701 . - . utg265_pilon exonerate:protein2genome:local exon 1084587 1084701 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 1084585 1084586 . - . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 1057764 1084586 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 1057764 1057765 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 1057747 1057763 . - . utg265_pilon exonerate:protein2genome:local exon 1057747 1057763 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1057747 1084701 103 - . alignment_id 0 ; Query GL50803_32155-t26_1-p1 ; Align 1084702 21 114 ; Align 1057762 60 15 utg11_pilon exonerate:protein2genome:local gene 669786 670019 179 - . gene_id 0 ; sequence GL50803_32163-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 669786 670019 . - . utg11_pilon exonerate:protein2genome:local exon 669786 670019 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 669786 670019 179 - . alignment_id 0 ; Query GL50803_32163-t26_1-p1 ; Align 670020 1 234 utg731_pilon exonerate:protein2genome:local gene 1523948 1524148 140 + . gene_id 0 ; sequence GL50803_32176-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1523948 1524148 . + . utg731_pilon exonerate:protein2genome:local exon 1523948 1524148 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1523948 1524148 140 + . alignment_id 0 ; Query GL50803_32176-t26_1-p1 ; Align 1523948 22 201 utg731_pilon exonerate:protein2genome:local gene 1525113 1525436 216 + . gene_id 0 ; sequence GL50803_32177-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1525113 1525436 . + . utg731_pilon exonerate:protein2genome:local exon 1525113 1525436 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1525113 1525436 216 + . alignment_id 0 ; Query GL50803_32177-t26_1-p1 ; Align 1525113 2 324 utg731_pilon exonerate:protein2genome:local gene 1484028 1484255 332 + . gene_id 0 ; sequence GL50803_32181-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1484028 1484255 . + . utg731_pilon exonerate:protein2genome:local exon 1484028 1484255 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1484028 1484255 332 + . alignment_id 0 ; Query GL50803_32181-t26_1-p1 ; Align 1484028 1 228 utg11_pilon exonerate:protein2genome:local gene 1525772 1526074 350 - . gene_id 0 ; sequence GL50803_32187-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1525772 1526074 . - . utg11_pilon exonerate:protein2genome:local exon 1525772 1526074 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1525772 1526074 350 - . alignment_id 0 ; Query GL50803_32187-t26_1-p1 ; Align 1526075 1 147 ; Align 1525925 50 153 utg64_pilon exonerate:protein2genome:local gene 862683 863069 449 + . gene_id 0 ; sequence GL50803_32201-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 862683 863069 . + . utg64_pilon exonerate:protein2genome:local exon 862683 863069 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 862683 863069 449 + . alignment_id 0 ; Query GL50803_32201-t26_1-p1 ; Align 862683 3 387 utg64_pilon exonerate:protein2genome:local gene 904341 904517 159 - . gene_id 0 ; sequence GL50803_32205-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 904341 904517 . - . utg64_pilon exonerate:protein2genome:local exon 904341 904517 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 904341 904517 159 - . alignment_id 0 ; Query GL50803_32205-t26_1-p1 ; Align 904518 1 177 utg47_pilon exonerate:protein2genome:local gene 1494178 1494903 734 + . gene_id 0 ; sequence GL50803_32206-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1494178 1494903 . + . utg47_pilon exonerate:protein2genome:local exon 1494178 1494903 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1494178 1494903 734 + . alignment_id 0 ; Query GL50803_32206-t26_1-p1 ; Align 1494178 1 726 utg47_pilon exonerate:protein2genome:local gene 1471458 1471763 304 + . gene_id 0 ; sequence GL50803_32209-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1471458 1471763 . + . utg47_pilon exonerate:protein2genome:local exon 1471458 1471763 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1471458 1471763 304 + . alignment_id 0 ; Query GL50803_32209-t26_1-p1 ; Align 1471458 1 42 ; Align 1471500 16 264 utg47_pilon exonerate:protein2genome:local gene 1457490 1457705 161 - . gene_id 0 ; sequence GL50803_32210-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1457490 1457705 . - . utg47_pilon exonerate:protein2genome:local exon 1457490 1457705 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1457490 1457705 161 - . alignment_id 0 ; Query GL50803_32210-t26_1-p1 ; Align 1457706 9 216 utg47_pilon exonerate:protein2genome:local gene 1444940 1445273 276 + . gene_id 0 ; sequence GL50803_32212-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1444940 1445273 . + . utg47_pilon exonerate:protein2genome:local exon 1444940 1445273 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1444940 1445273 276 + . alignment_id 0 ; Query GL50803_32212-t26_1-p1 ; Align 1444940 1 192 ; Align 1445133 65 141 utg47_pilon exonerate:protein2genome:local gene 1387742 1387969 194 - . gene_id 0 ; sequence GL50803_32215-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1387742 1387969 . - . utg47_pilon exonerate:protein2genome:local exon 1387742 1387969 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1387742 1387969 194 - . alignment_id 0 ; Query GL50803_32215-t26_1-p1 ; Align 1387970 2 228 utg349_pilon exonerate:protein2genome:local gene 490854 491162 308 + . gene_id 0 ; sequence GL50803_32217-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 490854 491162 . + . utg349_pilon exonerate:protein2genome:local exon 490854 491162 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 490854 491162 308 + . alignment_id 0 ; Query GL50803_32217-t26_1-p1 ; Align 490854 1 309 utg349_pilon exonerate:protein2genome:local gene 556858 557013 171 - . gene_id 0 ; sequence GL50803_32220-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 556858 557013 . - . utg349_pilon exonerate:protein2genome:local exon 556858 557013 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 556858 557013 171 - . alignment_id 0 ; Query GL50803_32220-t26_1-p1 ; Align 557014 1 156 utg731_pilon exonerate:protein2genome:local gene 625654 625932 249 - . gene_id 0 ; sequence GL50803_32230-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 625654 625932 . - . utg731_pilon exonerate:protein2genome:local exon 625654 625932 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 625654 625932 249 - . alignment_id 0 ; Query GL50803_32230-t26_1-p1 ; Align 625933 3 279 utg731_pilon exonerate:protein2genome:local gene 610813 611301 421 + . gene_id 0 ; sequence GL50803_32233-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 610813 611301 . + . utg731_pilon exonerate:protein2genome:local exon 610813 611301 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 610813 611301 421 + . alignment_id 0 ; Query GL50803_32233-t26_1-p1 ; Align 610813 2 489 utg731_pilon exonerate:protein2genome:local gene 609109 609390 240 - . gene_id 0 ; sequence GL50803_32234-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 609109 609390 . - . utg731_pilon exonerate:protein2genome:local exon 609109 609390 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 609109 609390 240 - . alignment_id 0 ; Query GL50803_32234-t26_1-p1 ; Align 609391 2 282 utg731_pilon exonerate:protein2genome:local gene 591576 591899 356 - . gene_id 0 ; sequence GL50803_32235-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 591576 591899 . - . utg731_pilon exonerate:protein2genome:local exon 591576 591899 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 591576 591899 356 - . alignment_id 0 ; Query GL50803_32235-t26_1-p1 ; Align 591900 94 324 utg731_pilon exonerate:protein2genome:local gene 538414 538554 142 + . gene_id 0 ; sequence GL50803_32236-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 538414 538554 . + . utg731_pilon exonerate:protein2genome:local exon 538414 538554 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 538414 538554 142 + . alignment_id 0 ; Query GL50803_32236-t26_1-p1 ; Align 538414 3 141 utg731_pilon exonerate:protein2genome:local gene 538814 538954 142 + . gene_id 0 ; sequence GL50803_32236-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 538814 538954 . + . utg731_pilon exonerate:protein2genome:local exon 538814 538954 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 538814 538954 142 + . alignment_id 0 ; Query GL50803_32236-t26_1-p1 ; Align 538814 3 141 utg731_pilon exonerate:protein2genome:local gene 539217 539357 142 + . gene_id 0 ; sequence GL50803_32236-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 539217 539357 . + . utg731_pilon exonerate:protein2genome:local exon 539217 539357 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 539217 539357 142 + . alignment_id 0 ; Query GL50803_32236-t26_1-p1 ; Align 539217 3 141 utg731_pilon exonerate:protein2genome:local gene 539890 540030 142 + . gene_id 0 ; sequence GL50803_32236-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 539890 540030 . + . utg731_pilon exonerate:protein2genome:local exon 539890 540030 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 539890 540030 142 + . alignment_id 0 ; Query GL50803_32236-t26_1-p1 ; Align 539890 3 141 utg731_pilon exonerate:protein2genome:local gene 540301 540441 142 + . gene_id 0 ; sequence GL50803_32236-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 540301 540441 . + . utg731_pilon exonerate:protein2genome:local exon 540301 540441 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 540301 540441 142 + . alignment_id 0 ; Query GL50803_32236-t26_1-p1 ; Align 540301 3 141 utg731_pilon exonerate:protein2genome:local gene 540702 540842 142 + . gene_id 0 ; sequence GL50803_32236-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 540702 540842 . + . utg731_pilon exonerate:protein2genome:local exon 540702 540842 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 540702 540842 142 + . alignment_id 0 ; Query GL50803_32236-t26_1-p1 ; Align 540702 3 141 utg731_pilon exonerate:protein2genome:local gene 541495 541635 142 + . gene_id 0 ; sequence GL50803_32236-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 541495 541635 . + . utg731_pilon exonerate:protein2genome:local exon 541495 541635 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 541495 541635 142 + . alignment_id 0 ; Query GL50803_32236-t26_1-p1 ; Align 541495 3 141 utg731_pilon exonerate:protein2genome:local gene 542707 542847 142 + . gene_id 0 ; sequence GL50803_32236-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 542707 542847 . + . utg731_pilon exonerate:protein2genome:local exon 542707 542847 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 542707 542847 142 + . alignment_id 0 ; Query GL50803_32236-t26_1-p1 ; Align 542707 3 141 utg731_pilon exonerate:protein2genome:local gene 543522 543662 142 + . gene_id 0 ; sequence GL50803_32236-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 543522 543662 . + . utg731_pilon exonerate:protein2genome:local exon 543522 543662 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 543522 543662 142 + . alignment_id 0 ; Query GL50803_32236-t26_1-p1 ; Align 543522 3 141 utg731_pilon exonerate:protein2genome:local gene 544338 544478 142 + . gene_id 0 ; sequence GL50803_32236-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 544338 544478 . + . utg731_pilon exonerate:protein2genome:local exon 544338 544478 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 544338 544478 142 + . alignment_id 0 ; Query GL50803_32236-t26_1-p1 ; Align 544338 3 141 utg731_pilon exonerate:protein2genome:local gene 545539 545679 142 + . gene_id 0 ; sequence GL50803_32236-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 545539 545679 . + . utg731_pilon exonerate:protein2genome:local exon 545539 545679 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 545539 545679 142 + . alignment_id 0 ; Query GL50803_32236-t26_1-p1 ; Align 545539 3 141 utg731_pilon exonerate:protein2genome:local gene 546760 546900 142 + . gene_id 0 ; sequence GL50803_32236-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 546760 546900 . + . utg731_pilon exonerate:protein2genome:local exon 546760 546900 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 546760 546900 142 + . alignment_id 0 ; Query GL50803_32236-t26_1-p1 ; Align 546760 3 141 utg731_pilon exonerate:protein2genome:local gene 547164 547304 142 + . gene_id 0 ; sequence GL50803_32236-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 547164 547304 . + . utg731_pilon exonerate:protein2genome:local exon 547164 547304 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 547164 547304 142 + . alignment_id 0 ; Query GL50803_32236-t26_1-p1 ; Align 547164 3 141 utg64_pilon exonerate:protein2genome:local gene 919637 919891 227 + . gene_id 0 ; sequence GL50803_32238-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 919637 919891 . + . utg64_pilon exonerate:protein2genome:local exon 919637 919891 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 919637 919891 227 + . alignment_id 0 ; Query GL50803_32238-t26_1-p1 ; Align 919637 1 255 utg64_pilon exonerate:protein2genome:local gene 925842 926421 479 - . gene_id 0 ; sequence GL50803_32239-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 925842 926421 . - . utg64_pilon exonerate:protein2genome:local exon 925842 926421 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 925842 926421 479 - . alignment_id 0 ; Query GL50803_32239-t26_1-p1 ; Align 926422 1 513 ; Align 925908 172 66 utg64_pilon exonerate:protein2genome:local gene 964427 964705 282 - . gene_id 0 ; sequence GL50803_32245-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 964427 964705 . - . utg64_pilon exonerate:protein2genome:local exon 964427 964705 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 964427 964705 282 - . alignment_id 0 ; Query GL50803_32245-t26_1-p1 ; Align 964706 2 279 utg64_pilon exonerate:protein2genome:local gene 1010601 1010969 374 - . gene_id 0 ; sequence GL50803_32250-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1010601 1010969 . - . utg64_pilon exonerate:protein2genome:local exon 1010601 1010969 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1010601 1010969 374 - . alignment_id 0 ; Query GL50803_32250-t26_1-p1 ; Align 1010970 1 369 utg64_pilon exonerate:protein2genome:local gene 1013442 1013705 166 + . gene_id 0 ; sequence GL50803_32251-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1013442 1013705 . + . utg64_pilon exonerate:protein2genome:local exon 1013442 1013705 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 1013442 1013705 166 + . alignment_id 0 ; Query GL50803_32251-t26_1-p1 ; Align 1013442 1 30 ; Align 1013472 12 234 utg64_pilon exonerate:protein2genome:local gene 1020550 1020714 106 - . gene_id 0 ; sequence GL50803_32253-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1020550 1020714 . - . utg64_pilon exonerate:protein2genome:local exon 1020550 1020714 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1020550 1020714 106 - . alignment_id 0 ; Query GL50803_32253-t26_1-p1 ; Align 1020715 1 165 utg64_pilon exonerate:protein2genome:local gene 1024047 1024532 466 + . gene_id 0 ; sequence GL50803_32254-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1024047 1024532 . + . utg64_pilon exonerate:protein2genome:local exon 1024047 1024532 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1024047 1024532 466 + . alignment_id 0 ; Query GL50803_32254-t26_1-p1 ; Align 1024047 1 486 utg64_pilon exonerate:protein2genome:local gene 1024366 1024572 259 + . gene_id 0 ; sequence GL50803_32255-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1024366 1024572 . + . utg64_pilon exonerate:protein2genome:local exon 1024366 1024572 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1024366 1024572 259 + . alignment_id 0 ; Query GL50803_32255-t26_1-p1 ; Align 1024366 1 207 utg308_pilon exonerate:protein2genome:local gene 316747 316926 168 + . gene_id 0 ; sequence GL50803_32260-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 316747 316926 . + . utg308_pilon exonerate:protein2genome:local exon 316747 316926 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 316747 316926 168 + . alignment_id 0 ; Query GL50803_32260-t26_1-p1 ; Align 316747 1 180 utg308_pilon exonerate:protein2genome:local gene 312288 312503 258 - . gene_id 0 ; sequence GL50803_32262-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 312288 312503 . - . utg308_pilon exonerate:protein2genome:local exon 312288 312503 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 312288 312503 258 - . alignment_id 0 ; Query GL50803_32262-t26_1-p1 ; Align 312504 2 216 utg308_pilon exonerate:protein2genome:local gene 348697 349266 930 - . gene_id 0 ; sequence GL50803_32265-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 348697 349266 . - . utg308_pilon exonerate:protein2genome:local exon 348697 349266 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 348697 349266 930 - . alignment_id 0 ; Query GL50803_32265-t26_1-p1 ; Align 349267 1 570 utg731_pilon exonerate:protein2genome:local gene 1523948 1524148 151 + . gene_id 0 ; sequence GL50803_32270-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1523948 1524148 . + . utg731_pilon exonerate:protein2genome:local exon 1523948 1524148 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1523948 1524148 151 + . alignment_id 0 ; Query GL50803_32270-t26_1-p1 ; Align 1523948 22 201 utg308_pilon exonerate:protein2genome:local gene 378417 378785 299 + . gene_id 0 ; sequence GL50803_32272-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 378417 378785 . + . utg308_pilon exonerate:protein2genome:local exon 378417 378785 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 378417 378785 299 + . alignment_id 0 ; Query GL50803_32272-t26_1-p1 ; Align 378417 1 369 utg308_pilon exonerate:protein2genome:local gene 563883 564008 126 - . gene_id 0 ; sequence GL50803_32286-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 563883 564008 . - . utg308_pilon exonerate:protein2genome:local exon 563883 564008 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 563883 564008 126 - . alignment_id 0 ; Query GL50803_32286-t26_1-p1 ; Align 564009 1 126 utg308_pilon exonerate:protein2genome:local gene 564528 564800 220 + . gene_id 0 ; sequence GL50803_32287-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 564528 564800 . + . utg308_pilon exonerate:protein2genome:local exon 564528 564800 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 564528 564800 220 + . alignment_id 0 ; Query GL50803_32287-t26_1-p1 ; Align 564528 6 273 utg349_pilon exonerate:protein2genome:local gene 999874 1000129 274 + . gene_id 0 ; sequence GL50803_32296-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 999874 1000129 . + . utg349_pilon exonerate:protein2genome:local exon 999874 1000129 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 999874 1000129 274 + . alignment_id 0 ; Query GL50803_32296-t26_1-p1 ; Align 999874 1 51 ; Align 999926 18 204 utg349_pilon exonerate:protein2genome:local gene 987673 987948 363 - . gene_id 0 ; sequence GL50803_32297-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 987673 987948 . - . utg349_pilon exonerate:protein2genome:local exon 987673 987948 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 987673 987948 363 - . alignment_id 0 ; Query GL50803_32297-t26_1-p1 ; Align 987949 33 276 utg349_pilon exonerate:protein2genome:local gene 1398981 1399181 217 + . gene_id 0 ; sequence GL50803_32308-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1398981 1399181 . + . utg349_pilon exonerate:protein2genome:local exon 1398981 1399181 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1398981 1399181 217 + . alignment_id 0 ; Query GL50803_32308-t26_1-p1 ; Align 1398981 1 201 utg349_pilon exonerate:protein2genome:local gene 1387897 1388463 653 + . gene_id 0 ; sequence GL50803_32309-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1387897 1388463 . + . utg349_pilon exonerate:protein2genome:local exon 1387897 1388463 . + . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 1387897 1388463 653 + . alignment_id 0 ; Query GL50803_32309-t26_1-p1 ; Align 1387897 1 480 ; Align 1388377 164 87 utg349_pilon exonerate:protein2genome:local gene 1387463 1387720 404 + . gene_id 0 ; sequence GL50803_32310-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1387463 1387720 . + . utg349_pilon exonerate:protein2genome:local exon 1387463 1387720 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1387463 1387720 404 + . alignment_id 0 ; Query GL50803_32310-t26_1-p1 ; Align 1387463 1 258 utg349_pilon exonerate:protein2genome:local gene 1356360 1356635 377 + . gene_id 0 ; sequence GL50803_32311-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1356360 1356635 . + . utg349_pilon exonerate:protein2genome:local exon 1356360 1356635 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1356360 1356635 377 + . alignment_id 0 ; Query GL50803_32311-t26_1-p1 ; Align 1356360 1 276 utg349_pilon exonerate:protein2genome:local gene 1334981 1336513 2479 - . gene_id 0 ; sequence GL50803_32312-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1334981 1336513 . - . utg349_pilon exonerate:protein2genome:local exon 1334981 1336513 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1334981 1336513 2479 - . alignment_id 0 ; Query GL50803_32312-t26_1-p1 ; Align 1336514 1 504 ; Align 1336007 169 1026 utg349_pilon exonerate:protein2genome:local gene 1300876 1301178 188 + . gene_id 0 ; sequence GL50803_32321-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1300876 1301178 . + . utg349_pilon exonerate:protein2genome:local exon 1300876 1301178 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1300876 1301178 188 + . alignment_id 0 ; Query GL50803_32321-t26_1-p1 ; Align 1300876 2 303 utg349_pilon exonerate:protein2genome:local gene 1283124 1283513 353 - . gene_id 0 ; sequence GL50803_32323-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1283124 1283513 . - . utg349_pilon exonerate:protein2genome:local exon 1283124 1283513 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1283124 1283513 353 - . alignment_id 0 ; Query GL50803_32323-t26_1-p1 ; Align 1283514 3 390 utg349_pilon exonerate:protein2genome:local gene 1280640 1281080 364 + . gene_id 0 ; sequence GL50803_32324-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1280640 1281080 . + . utg349_pilon exonerate:protein2genome:local exon 1280640 1281080 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1280640 1281080 364 + . alignment_id 0 ; Query GL50803_32324-t26_1-p1 ; Align 1280640 27 441 utg349_pilon exonerate:protein2genome:local gene 1268415 1268561 148 + . gene_id 0 ; sequence GL50803_32328-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1268415 1268561 . + . utg349_pilon exonerate:protein2genome:local exon 1268415 1268561 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1268415 1268561 148 + . alignment_id 0 ; Query GL50803_32328-t26_1-p1 ; Align 1268415 1 147 utg308_pilon exonerate:protein2genome:local gene 211952 212230 272 + . gene_id 0 ; sequence GL50803_32331-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 211952 212230 . + . utg308_pilon exonerate:protein2genome:local exon 211952 212230 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 211952 212230 272 + . alignment_id 0 ; Query GL50803_32331-t26_1-p1 ; Align 211952 1 279 utg308_pilon exonerate:protein2genome:local gene 209461 210009 610 + . gene_id 0 ; sequence GL50803_32332-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 209461 210009 . + . utg308_pilon exonerate:protein2genome:local exon 209461 210009 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 209461 210009 610 + . alignment_id 0 ; Query GL50803_32332-t26_1-p1 ; Align 209461 1 549 utg308_pilon exonerate:protein2genome:local gene 204311 204442 174 + . gene_id 0 ; sequence GL50803_32333-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 204311 204442 . + . utg308_pilon exonerate:protein2genome:local exon 204311 204442 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 204311 204442 174 + . alignment_id 0 ; Query GL50803_32333-t26_1-p1 ; Align 204311 1 132 utg308_pilon exonerate:protein2genome:local gene 196032 196409 471 - . gene_id 0 ; sequence GL50803_32335-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 196032 196409 . - . utg308_pilon exonerate:protein2genome:local exon 196032 196409 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 196032 196409 471 - . alignment_id 0 ; Query GL50803_32335-t26_1-p1 ; Align 196410 1 378 utg64_pilon exonerate:protein2genome:local gene 535154 847651 393 + . gene_id 0 ; sequence GL50803_32337-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 535154 535256 . + . utg64_pilon exonerate:protein2genome:local exon 535154 535256 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 535257 535258 . + . intron_id 1 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 535257 619818 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 619817 619818 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 619819 619905 . + . utg64_pilon exonerate:protein2genome:local exon 619819 619905 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 619906 619907 . + . intron_id 2 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local intron 619906 766706 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 766705 766706 . + . intron_id 1 ; splice_site "AC" utg64_pilon exonerate:protein2genome:local cds 766707 766890 . + . utg64_pilon exonerate:protein2genome:local exon 766707 766890 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 766891 766892 . + . intron_id 3 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 766891 847449 . + . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 847448 847449 . + . intron_id 2 ; splice_site "CG" utg64_pilon exonerate:protein2genome:local cds 847450 847651 . + . utg64_pilon exonerate:protein2genome:local exon 847450 847651 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 535154 847651 393 + . alignment_id 0 ; Query GL50803_32337-t26_1-p1 ; Align 535154 2 102 ; Align 619821 37 84 ; Align 766709 66 180 ; Align 847451 127 201 utg308_pilon exonerate:protein2genome:local gene 176974 177240 167 + . gene_id 0 ; sequence GL50803_32339-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 176974 177240 . + . utg308_pilon exonerate:protein2genome:local exon 176974 177240 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 176974 177240 167 + . alignment_id 0 ; Query GL50803_32339-t26_1-p1 ; Align 176974 3 267 utg308_pilon exonerate:protein2genome:local gene 163671 163877 169 - . gene_id 0 ; sequence GL50803_32340-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 163671 163877 . - . utg308_pilon exonerate:protein2genome:local exon 163671 163877 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 163671 163877 169 - . alignment_id 0 ; Query GL50803_32340-t26_1-p1 ; Align 163878 1 207 utg308_pilon exonerate:protein2genome:local gene 162898 163171 138 + . gene_id 0 ; sequence GL50803_32341-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 162898 163171 . + . utg308_pilon exonerate:protein2genome:local exon 162898 163171 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 162898 163171 138 + . alignment_id 0 ; Query GL50803_32341-t26_1-p1 ; Align 162898 1 99 ; Align 162998 34 174 utg308_pilon exonerate:protein2genome:local gene 104716 104946 259 - . gene_id 0 ; sequence GL50803_32349-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 104716 104946 . - . utg308_pilon exonerate:protein2genome:local exon 104716 104946 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 104716 104946 259 - . alignment_id 0 ; Query GL50803_32349-t26_1-p1 ; Align 104947 1 231 utg308_pilon exonerate:protein2genome:local gene 50843 51085 205 - . gene_id 0 ; sequence GL50803_32352-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 50843 51085 . - . utg308_pilon exonerate:protein2genome:local exon 50843 51085 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 50843 51085 205 - . alignment_id 0 ; Query GL50803_32352-t26_1-p1 ; Align 51086 13 69 ; Align 51017 37 174 utg308_pilon exonerate:protein2genome:local gene 24030 24367 315 + . gene_id 0 ; sequence GL50803_32354-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 24030 24367 . + . utg308_pilon exonerate:protein2genome:local exon 24030 24367 . + . insertions 0 ; deletions 4 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 24030 24367 315 + . alignment_id 0 ; Query GL50803_32354-t26_1-p1 ; Align 24030 3 111 ; Align 24141 44 189 ; Align 24332 107 36 utg47_pilon exonerate:protein2genome:local gene 275783 276214 401 + . gene_id 0 ; sequence GL50803_32359-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 275783 276214 . + . utg47_pilon exonerate:protein2genome:local exon 275783 276214 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 275783 276214 401 + . alignment_id 0 ; Query GL50803_32359-t26_1-p1 ; Align 275783 1 432 utg47_pilon exonerate:protein2genome:local gene 248025 248915 1122 + . gene_id 0 ; sequence GL50803_32363-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 248025 248915 . + . utg47_pilon exonerate:protein2genome:local exon 248025 248915 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 248025 248915 1122 + . alignment_id 0 ; Query GL50803_32363-t26_1-p1 ; Align 248025 1 891 utg47_pilon exonerate:protein2genome:local gene 232055 232327 308 + . gene_id 0 ; sequence GL50803_32365-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 232055 232327 . + . utg47_pilon exonerate:protein2genome:local exon 232055 232327 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 232055 232327 308 + . alignment_id 0 ; Query GL50803_32365-t26_1-p1 ; Align 232055 2 273 utg47_pilon exonerate:protein2genome:local gene 204200 204487 199 - . gene_id 0 ; sequence GL50803_32369-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 204200 204487 . - . utg47_pilon exonerate:protein2genome:local exon 204200 204487 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 204200 204487 199 - . alignment_id 0 ; Query GL50803_32369-t26_1-p1 ; Align 204488 8 288 utg212_pilon exonerate:protein2genome:local gene 14173 15399 291 - . gene_id 0 ; sequence GL50803_32372-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 15322 15399 . - . utg212_pilon exonerate:protein2genome:local exon 15322 15399 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 15320 15321 . - . intron_id 1 ; splice_site "CT" utg212_pilon exonerate:protein2genome:local intron 14431 15321 . - . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 14431 14432 . - . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 14173 14430 . - . utg212_pilon exonerate:protein2genome:local exon 14173 14430 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14173 15399 291 - . alignment_id 0 ; Query GL50803_32372-t26_1-p1 ; Align 15400 1 78 ; Align 14431 27 258 utg47_pilon exonerate:protein2genome:local gene 149722 152669 3817 + . gene_id 0 ; sequence GL50803_32375-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 149722 152669 . + . utg47_pilon exonerate:protein2genome:local exon 149722 152669 . + . insertions 15 ; deletions 2 ; frameshifts 5 utg47_pilon exonerate:protein2genome:local similarity 149722 152669 3817 + . alignment_id 0 ; Query GL50803_32375-t26_1-p1 ; Align 149722 1 717 ; Align 150439 241 30 ; Align 150469 252 1254 ; Align 151726 670 144 ; Align 151874 718 9 ; Align 151889 721 36 ; Align 151931 733 522 ; Align 152454 907 216 utg11_pilon exonerate:protein2genome:local gene 1673005 1673268 206 - . gene_id 0 ; sequence GL50803_32380-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1673005 1673268 . - . utg11_pilon exonerate:protein2genome:local exon 1673005 1673268 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1673005 1673268 206 - . alignment_id 0 ; Query GL50803_32380-t26_1-p1 ; Align 1673269 2 264 utg11_pilon exonerate:protein2genome:local gene 1691620 1691976 370 - . gene_id 0 ; sequence GL50803_32381-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1691620 1691976 . - . utg11_pilon exonerate:protein2genome:local exon 1691620 1691976 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1691620 1691976 370 - . alignment_id 0 ; Query GL50803_32381-t26_1-p1 ; Align 1691977 1 357 utg11_pilon exonerate:protein2genome:local gene 1698476 1698769 289 - . gene_id 0 ; sequence GL50803_32383-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1698476 1698769 . - . utg11_pilon exonerate:protein2genome:local exon 1698476 1698769 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1698476 1698769 289 - . alignment_id 0 ; Query GL50803_32383-t26_1-p1 ; Align 1698770 2 51 ; Align 1698719 20 243 utg11_pilon exonerate:protein2genome:local gene 1715137 1715595 662 + . gene_id 0 ; sequence GL50803_32386-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1715137 1715595 . + . utg11_pilon exonerate:protein2genome:local exon 1715137 1715595 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1715137 1715595 662 + . alignment_id 0 ; Query GL50803_32386-t26_1-p1 ; Align 1715137 2 459 utg11_pilon exonerate:protein2genome:local gene 1772918 1773055 167 + . gene_id 0 ; sequence GL50803_32390-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1772918 1773055 . + . utg11_pilon exonerate:protein2genome:local exon 1772918 1773055 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1772918 1773055 167 + . alignment_id 0 ; Query GL50803_32390-t26_1-p1 ; Align 1772918 2 138 utg11_pilon exonerate:protein2genome:local gene 1779188 1779656 339 + . gene_id 0 ; sequence GL50803_32391-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1779188 1779656 . + . utg11_pilon exonerate:protein2genome:local exon 1779188 1779656 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 1779188 1779656 339 + . alignment_id 0 ; Query GL50803_32391-t26_1-p1 ; Align 1779188 1 342 ; Align 1779531 115 126 utg64_pilon exonerate:protein2genome:local gene 250846 252501 2464 + . gene_id 0 ; sequence GL50803_32398-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 250846 252501 . + . utg64_pilon exonerate:protein2genome:local exon 250846 252501 . + . insertions 0 ; deletions 9 utg64_pilon exonerate:protein2genome:local similarity 250846 252501 2464 + . alignment_id 0 ; Query GL50803_32398-t26_1-p1 ; Align 250846 1 543 ; Align 251389 186 111 ; Align 251500 227 24 ; Align 251524 236 978 utg64_pilon exonerate:protein2genome:local gene 249487 250702 1908 - . gene_id 0 ; sequence GL50803_32399-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 249487 250702 . - . utg64_pilon exonerate:protein2genome:local exon 249487 250702 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 249487 250702 1908 - . alignment_id 0 ; Query GL50803_32399-t26_1-p1 ; Align 250703 39 39 ; Align 250663 52 1176 utg64_pilon exonerate:protein2genome:local gene 182647 182961 267 + . gene_id 0 ; sequence GL50803_32402-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 182647 182961 . + . utg64_pilon exonerate:protein2genome:local exon 182647 182961 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 182647 182961 267 + . alignment_id 0 ; Query GL50803_32402-t26_1-p1 ; Align 182647 1 315 utg64_pilon exonerate:protein2genome:local gene 180895 181095 274 + . gene_id 0 ; sequence GL50803_32403-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 180895 181095 . + . utg64_pilon exonerate:protein2genome:local exon 180895 181095 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 180895 181095 274 + . alignment_id 0 ; Query GL50803_32403-t26_1-p1 ; Align 180895 1 201 utg64_pilon exonerate:protein2genome:local gene 103431 103601 127 - . gene_id 0 ; sequence GL50803_32408-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 103431 103601 . - . utg64_pilon exonerate:protein2genome:local exon 103431 103601 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 103431 103601 127 - . alignment_id 0 ; Query GL50803_32408-t26_1-p1 ; Align 103602 1 171 utg64_pilon exonerate:protein2genome:local gene 120498 120884 463 + . gene_id 0 ; sequence GL50803_32409-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 120498 120884 . + . utg64_pilon exonerate:protein2genome:local exon 120498 120884 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 120498 120884 463 + . alignment_id 0 ; Query GL50803_32409-t26_1-p1 ; Align 120498 1 387 utg64_pilon exonerate:protein2genome:local gene 124682 124813 160 - . gene_id 0 ; sequence GL50803_32410-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 124682 124813 . - . utg64_pilon exonerate:protein2genome:local exon 124682 124813 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 124682 124813 160 - . alignment_id 0 ; Query GL50803_32410-t26_1-p1 ; Align 124814 5 132 utg64_pilon exonerate:protein2genome:local gene 29122 29736 796 - . gene_id 0 ; sequence GL50803_32413-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 29122 29736 . - . utg64_pilon exonerate:protein2genome:local exon 29122 29736 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 29122 29736 796 - . alignment_id 0 ; Query GL50803_32413-t26_1-p1 ; Align 29737 1 615 utg265_pilon exonerate:protein2genome:local gene 751704 753362 2237 - . gene_id 0 ; sequence GL50803_32419-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 751704 753362 . - . utg265_pilon exonerate:protein2genome:local exon 751704 753362 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 751704 753362 2237 - . alignment_id 0 ; Query GL50803_32419-t26_1-p1 ; Align 753363 1 1659 utg265_pilon exonerate:protein2genome:local gene 735396 735758 420 - . gene_id 0 ; sequence GL50803_32421-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 735396 735758 . - . utg265_pilon exonerate:protein2genome:local exon 735396 735758 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 735396 735758 420 - . alignment_id 0 ; Query GL50803_32421-t26_1-p1 ; Align 735759 1 363 utg265_pilon exonerate:protein2genome:local gene 1053426 1053644 189 + . gene_id 0 ; sequence GL50803_32426-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1053426 1053644 . + . utg265_pilon exonerate:protein2genome:local exon 1053426 1053644 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1053426 1053644 189 + . alignment_id 0 ; Query GL50803_32426-t26_1-p1 ; Align 1053426 1 219 utg265_pilon exonerate:protein2genome:local gene 803852 1047705 191 + . gene_id 0 ; sequence GL50803_32427-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 803852 803933 . + . utg265_pilon exonerate:protein2genome:local exon 803852 803933 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 803934 803935 . + . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 803934 954467 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 954466 954467 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 954468 954517 . + . utg265_pilon exonerate:protein2genome:local exon 954468 954517 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 954518 954519 . + . intron_id 2 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 954518 1047474 . + . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 1047473 1047474 . + . intron_id 1 ; splice_site "TA" utg265_pilon exonerate:protein2genome:local cds 1047475 1047705 . + . utg265_pilon exonerate:protein2genome:local exon 1047475 1047705 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 803852 1047705 191 + . alignment_id 0 ; Query GL50803_32427-t26_1-p1 ; Align 803852 24 81 ; Align 954470 52 48 ; Align 1047475 68 231 utg265_pilon exonerate:protein2genome:local gene 1041533 1041901 335 - . gene_id 0 ; sequence GL50803_32429-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1041533 1041901 . - . utg265_pilon exonerate:protein2genome:local exon 1041533 1041901 . - . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1041533 1041901 335 - . alignment_id 0 ; Query GL50803_32429-t26_1-p1 ; Align 1041902 1 336 ; Align 1041563 113 30 utg265_pilon exonerate:protein2genome:local gene 1020950 1021321 204 + . gene_id 0 ; sequence GL50803_32430-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1020950 1021321 . + . utg265_pilon exonerate:protein2genome:local exon 1020950 1021321 . + . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 1020950 1021321 204 + . alignment_id 0 ; Query GL50803_32430-t26_1-p1 ; Align 1020950 1 45 ; Align 1020995 18 327 utg265_pilon exonerate:protein2genome:local gene 1009087 1009227 161 + . gene_id 0 ; sequence GL50803_32433-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1009087 1009227 . + . utg265_pilon exonerate:protein2genome:local exon 1009087 1009227 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1009087 1009227 161 + . alignment_id 0 ; Query GL50803_32433-t26_1-p1 ; Align 1009087 1 141 utg265_pilon exonerate:protein2genome:local gene 1000904 1001266 387 + . gene_id 0 ; sequence GL50803_32434-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1000904 1001266 . + . utg265_pilon exonerate:protein2genome:local exon 1000904 1001266 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1000904 1001266 387 + . alignment_id 0 ; Query GL50803_32434-t26_1-p1 ; Align 1000904 1 363 utg265_pilon exonerate:protein2genome:local gene 980087 980305 307 + . gene_id 0 ; sequence GL50803_32436-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 980087 980305 . + . utg265_pilon exonerate:protein2genome:local exon 980087 980305 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 980087 980305 307 + . alignment_id 0 ; Query GL50803_32436-t26_1-p1 ; Align 980087 1 219 utg265_pilon exonerate:protein2genome:local gene 936337 936528 174 - . gene_id 0 ; sequence GL50803_32439-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 936337 936528 . - . utg265_pilon exonerate:protein2genome:local exon 936337 936528 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 936337 936528 174 - . alignment_id 0 ; Query GL50803_32439-t26_1-p1 ; Align 936529 5 192 utg308_pilon exonerate:protein2genome:local gene 510573 510878 332 + . gene_id 0 ; sequence GL50803_32444-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 510573 510878 . + . utg308_pilon exonerate:protein2genome:local exon 510573 510878 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 510573 510878 332 + . alignment_id 0 ; Query GL50803_32444-t26_1-p1 ; Align 510573 1 249 ; Align 510822 85 57 utg308_pilon exonerate:protein2genome:local gene 515630 516166 542 + . gene_id 0 ; sequence GL50803_32445-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 515630 516166 . + . utg308_pilon exonerate:protein2genome:local exon 515630 516166 . + . insertions 6 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 515630 516166 542 + . alignment_id 0 ; Query GL50803_32445-t26_1-p1 ; Align 515630 1 267 ; Align 515900 90 24 ; Align 515927 98 240 utg308_pilon exonerate:protein2genome:local gene 957658 957939 340 + . gene_id 0 ; sequence GL50803_32450-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 957658 957939 . + . utg308_pilon exonerate:protein2genome:local exon 957658 957939 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 957658 957939 340 + . alignment_id 0 ; Query GL50803_32450-t26_1-p1 ; Align 957658 1 282 utg308_pilon exonerate:protein2genome:local gene 941672 941842 165 + . gene_id 0 ; sequence GL50803_32451-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 941672 941842 . + . utg308_pilon exonerate:protein2genome:local exon 941672 941842 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 941672 941842 165 + . alignment_id 0 ; Query GL50803_32451-t26_1-p1 ; Align 941672 1 171 utg308_pilon exonerate:protein2genome:local gene 941328 941435 148 - . gene_id 0 ; sequence GL50803_32452-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 941328 941435 . - . utg308_pilon exonerate:protein2genome:local exon 941328 941435 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 941328 941435 148 - . alignment_id 0 ; Query GL50803_32452-t26_1-p1 ; Align 941436 6 108 utg11_pilon exonerate:protein2genome:local gene 1459330 1459521 127 - . gene_id 0 ; sequence GL50803_32454-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1459330 1459521 . - . utg11_pilon exonerate:protein2genome:local exon 1459330 1459521 . - . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1459330 1459521 127 - . alignment_id 0 ; Query GL50803_32454-t26_1-p1 ; Align 1459522 2 99 ; Align 1459417 35 87 utg11_pilon exonerate:protein2genome:local gene 1443412 1444059 670 + . gene_id 0 ; sequence GL50803_32456-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1443412 1444059 . + . utg11_pilon exonerate:protein2genome:local exon 1443412 1444059 . + . insertions 3 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1443412 1444059 670 + . alignment_id 0 ; Query GL50803_32456-t26_1-p1 ; Align 1443412 4 45 ; Align 1443457 20 24 ; Align 1443481 29 75 ; Align 1443559 54 501 utg11_pilon exonerate:protein2genome:local gene 1427119 1427265 156 - . gene_id 0 ; sequence GL50803_32457-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1427119 1427265 . - . utg11_pilon exonerate:protein2genome:local exon 1427119 1427265 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1427119 1427265 156 - . alignment_id 0 ; Query GL50803_32457-t26_1-p1 ; Align 1427266 1 147 utg11_pilon exonerate:protein2genome:local gene 1041364 1041705 450 + . gene_id 0 ; sequence GL50803_32460-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1041364 1041705 . + . utg11_pilon exonerate:protein2genome:local exon 1041364 1041705 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1041364 1041705 450 + . alignment_id 0 ; Query GL50803_32460-t26_1-p1 ; Align 1041364 15 342 utg11_pilon exonerate:protein2genome:local gene 953499 953867 577 - . gene_id 0 ; sequence GL50803_32470-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 953499 953867 . - . utg11_pilon exonerate:protein2genome:local exon 953499 953867 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 953499 953867 577 - . alignment_id 0 ; Query GL50803_32470-t26_1-p1 ; Align 953868 1 369 utg731_pilon exonerate:protein2genome:local gene 1078856 1079065 227 + . gene_id 0 ; sequence GL50803_32485-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1078856 1079065 . + . utg731_pilon exonerate:protein2genome:local exon 1078856 1079065 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1078856 1079065 227 + . alignment_id 0 ; Query GL50803_32485-t26_1-p1 ; Align 1078856 1 210 utg731_pilon exonerate:protein2genome:local gene 1079766 1079966 207 - . gene_id 0 ; sequence GL50803_32486-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1079766 1079966 . - . utg731_pilon exonerate:protein2genome:local exon 1079766 1079966 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1079766 1079966 207 - . alignment_id 0 ; Query GL50803_32486-t26_1-p1 ; Align 1079967 1 201 utg731_pilon exonerate:protein2genome:local gene 1082598 1082873 286 - . gene_id 0 ; sequence GL50803_32487-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1082598 1082873 . - . utg731_pilon exonerate:protein2genome:local exon 1082598 1082873 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1082598 1082873 286 - . alignment_id 0 ; Query GL50803_32487-t26_1-p1 ; Align 1082874 1 276 utg731_pilon exonerate:protein2genome:local gene 1088341 1088664 313 + . gene_id 0 ; sequence GL50803_32488-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1088341 1088664 . + . utg731_pilon exonerate:protein2genome:local exon 1088341 1088664 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1088341 1088664 313 + . alignment_id 0 ; Query GL50803_32488-t26_1-p1 ; Align 1088341 1 324 utg731_pilon exonerate:protein2genome:local gene 1125782 1126088 252 - . gene_id 0 ; sequence GL50803_32489-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1125782 1126088 . - . utg731_pilon exonerate:protein2genome:local exon 1125782 1126088 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 1125782 1126088 252 - . alignment_id 0 ; Query GL50803_32489-t26_1-p1 ; Align 1126089 1 33 ; Align 1126055 12 273 utg731_pilon exonerate:protein2genome:local gene 1128769 1129143 245 - . gene_id 0 ; sequence GL50803_32491-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1128769 1129143 . - . utg731_pilon exonerate:protein2genome:local exon 1128769 1129143 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1128769 1129143 245 - . alignment_id 0 ; Query GL50803_32491-t26_1-p1 ; Align 1129144 1 375 utg731_pilon exonerate:protein2genome:local gene 1144485 1144940 569 + . gene_id 0 ; sequence GL50803_32493-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1144485 1144940 . + . utg731_pilon exonerate:protein2genome:local exon 1144485 1144940 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1144485 1144940 569 + . alignment_id 0 ; Query GL50803_32493-t26_1-p1 ; Align 1144485 11 72 ; Align 1144557 36 384 utg731_pilon exonerate:protein2genome:local gene 1144819 1145213 203 - . gene_id 0 ; sequence GL50803_32494-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1144819 1145213 . - . utg731_pilon exonerate:protein2genome:local exon 1144819 1145213 . - . insertions 3 ; deletions 0 ; frameshifts 5 utg731_pilon exonerate:protein2genome:local similarity 1144819 1145213 203 - . alignment_id 0 ; Query GL50803_32494-t26_1-p1 ; Align 1145214 1 255 ; Align 1144954 86 6 ; Align 1144945 88 126 utg731_pilon exonerate:protein2genome:local gene 1165980 1166285 299 + . gene_id 0 ; sequence GL50803_32497-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1165980 1166285 . + . utg731_pilon exonerate:protein2genome:local exon 1165980 1166285 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1165980 1166285 299 + . alignment_id 0 ; Query GL50803_32497-t26_1-p1 ; Align 1165980 2 306 utg731_pilon exonerate:protein2genome:local gene 1191823 1192011 232 - . gene_id 0 ; sequence GL50803_32500-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1191823 1192011 . - . utg731_pilon exonerate:protein2genome:local exon 1191823 1192011 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1191823 1192011 232 - . alignment_id 0 ; Query GL50803_32500-t26_1-p1 ; Align 1192012 1 189 utg731_pilon exonerate:protein2genome:local gene 1360015 1360695 414 - . gene_id 0 ; sequence GL50803_32506-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1360015 1360695 . - . utg731_pilon exonerate:protein2genome:local exon 1360015 1360695 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1360015 1360695 414 - . alignment_id 0 ; Query GL50803_32506-t26_1-p1 ; Align 1360696 1 75 ; Align 1360621 27 606 utg731_pilon exonerate:protein2genome:local gene 1388514 1388612 101 + . gene_id 0 ; sequence GL50803_32508-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1388514 1388612 . + . utg731_pilon exonerate:protein2genome:local exon 1388514 1388612 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1388514 1388612 101 + . alignment_id 0 ; Query GL50803_32508-t26_1-p1 ; Align 1388514 1 99 utg731_pilon exonerate:protein2genome:local gene 1404400 1407490 3642 - . gene_id 0 ; sequence GL50803_32509-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1404400 1407490 . - . utg731_pilon exonerate:protein2genome:local exon 1404400 1407490 . - . insertions 3 ; deletions 9 ; frameshifts 10 utg731_pilon exonerate:protein2genome:local similarity 1404400 1407490 3642 - . alignment_id 0 ; Query GL50803_32509-t26_1-p1 ; Align 1407491 1 204 ; Align 1407286 70 525 ; Align 1406760 245 33 ; Align 1406727 257 237 ; Align 1406487 336 39 ; Align 1406447 350 318 ; Align 1406128 457 204 ; Align 1405924 527 708 ; Align 1405214 763 3 ; Align 1405211 766 114 ; Align 1405095 804 102 ; Align 1404991 839 591 utg212_pilon exonerate:protein2genome:local gene 369780 370034 426 - . gene_id 0 ; sequence GL50803_32531-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 369780 370034 . - . utg212_pilon exonerate:protein2genome:local exon 369780 370034 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 369780 370034 426 - . alignment_id 0 ; Query GL50803_32531-t26_1-p1 ; Align 370035 4 255 utg265_pilon exonerate:protein2genome:local gene 501521 502375 1208 - . gene_id 0 ; sequence GL50803_3255-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 501521 502375 . - . utg265_pilon exonerate:protein2genome:local exon 501521 502375 . - . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 501521 502375 1208 - . alignment_id 0 ; Query GL50803_3255-t26_1-p1 ; Align 502376 1 453 ; Align 501920 152 399 utg265_pilon exonerate:protein2genome:local gene 502455 503686 1595 + . gene_id 0 ; sequence GL50803_3256-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 502455 503515 . + . utg265_pilon exonerate:protein2genome:local exon 502455 503515 . + . insertions 9 ; deletions 8 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local splice5 503516 503517 . + . intron_id 1 ; splice_site "CA" utg265_pilon exonerate:protein2genome:local intron 503516 503545 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 503544 503545 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 503546 503686 . + . utg265_pilon exonerate:protein2genome:local exon 503546 503686 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 502455 503686 1595 + . alignment_id 0 ; Query GL50803_3256-t26_1-p1 ; Align 502455 1 603 ; Align 503060 203 84 ; Align 503144 232 51 ; Align 503195 253 12 ; Align 503207 259 93 ; Align 503309 290 207 ; Align 503546 359 141 utg11_pilon exonerate:protein2genome:local gene 930252 932126 2343 + . gene_id 0 ; sequence GL50803_32571-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 930252 932126 . + . utg11_pilon exonerate:protein2genome:local exon 930252 932126 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 930252 932126 2343 + . alignment_id 0 ; Query GL50803_32571-t26_1-p1 ; Align 930252 10 1296 ; Align 931548 443 579 utg308_pilon exonerate:protein2genome:local gene 649542 649652 138 - . gene_id 0 ; sequence GL50803_32595-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 649542 649652 . - . utg308_pilon exonerate:protein2genome:local exon 649542 649652 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 649542 649652 138 - . alignment_id 0 ; Query GL50803_32595-t26_1-p1 ; Align 649653 1 111 utg308_pilon exonerate:protein2genome:local gene 647779 647916 195 - . gene_id 0 ; sequence GL50803_32597-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 647779 647916 . - . utg308_pilon exonerate:protein2genome:local exon 647779 647916 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 647779 647916 195 - . alignment_id 0 ; Query GL50803_32597-t26_1-p1 ; Align 647917 1 138 utg731_pilon exonerate:protein2genome:local gene 113583 118583 5711 + . gene_id 0 ; sequence GL50803_32606-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 113583 118583 . + . utg731_pilon exonerate:protein2genome:local exon 113583 118583 . + . insertions 3 ; deletions 7 utg731_pilon exonerate:protein2genome:local similarity 113583 118583 5711 + . alignment_id 0 ; Query GL50803_32606-t26_1-p1 ; Align 113583 4 1413 ; Align 114996 476 1329 ; Align 116325 920 132 ; Align 116460 964 225 ; Align 116685 1042 174 ; Align 116859 1101 255 ; Align 117114 1187 1470 utg99_pilon exonerate:protein2genome:local gene 52098 459954 2084 - . gene_id 0 ; sequence GL50803_32607-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 459880 459954 . - . utg99_pilon exonerate:protein2genome:local exon 459880 459954 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 459878 459879 . - . intron_id 1 ; splice_site "AT" utg99_pilon exonerate:protein2genome:local intron 325716 459879 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 325716 325717 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 325466 325715 . - . utg99_pilon exonerate:protein2genome:local exon 325466 325715 . - . insertions 0 ; deletions 3 utg99_pilon exonerate:protein2genome:local splice5 325464 325465 . - . intron_id 2 ; splice_site "GA" utg99_pilon exonerate:protein2genome:local intron 260012 325465 . - . intron_id 2 utg99_pilon exonerate:protein2genome:local splice3 260012 260013 . - . intron_id 1 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 259841 260011 . - . utg99_pilon exonerate:protein2genome:local exon 259841 260011 . - . insertions 15 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 259839 259840 . - . intron_id 3 ; splice_site "AT" utg99_pilon exonerate:protein2genome:local intron 259712 259840 . - . intron_id 3 utg99_pilon exonerate:protein2genome:local splice3 259712 259713 . - . intron_id 2 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 259625 259711 . - . utg99_pilon exonerate:protein2genome:local exon 259625 259711 . - . insertions 6 ; deletions 1 utg99_pilon exonerate:protein2genome:local splice5 259623 259624 . - . intron_id 4 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 194299 259624 . - . intron_id 4 utg99_pilon exonerate:protein2genome:local splice3 194299 194300 . - . intron_id 3 ; splice_site "TG" utg99_pilon exonerate:protein2genome:local cds 193883 194298 . - . utg99_pilon exonerate:protein2genome:local exon 193883 194298 . - . insertions 0 ; deletions 2 utg99_pilon exonerate:protein2genome:local splice5 193881 193882 . - . intron_id 5 ; splice_site "GC" utg99_pilon exonerate:protein2genome:local intron 181121 193882 . - . intron_id 5 utg99_pilon exonerate:protein2genome:local splice3 181121 181122 . - . intron_id 4 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 180717 181120 . - . utg99_pilon exonerate:protein2genome:local exon 180717 181120 . - . insertions 0 ; deletions 6 utg99_pilon exonerate:protein2genome:local splice5 180715 180716 . - . intron_id 6 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 53210 180716 . - . intron_id 6 utg99_pilon exonerate:protein2genome:local splice3 53210 53211 . - . intron_id 5 ; splice_site "AC" utg99_pilon exonerate:protein2genome:local cds 52098 53209 . - . utg99_pilon exonerate:protein2genome:local exon 52098 53209 . - . insertions 15 ; deletions 6 ; frameshifts 4 utg99_pilon exonerate:protein2genome:local similarity 52098 459954 2084 - . alignment_id 0 ; Query GL50803_32607-t26_1-p1 ; Align 459955 1 75 ; Align 325716 26 42 ; Align 325674 41 21 ; Align 325653 49 81 ; Align 325572 77 105 ; Align 260010 113 36 ; Align 259971 125 42 ; Align 259926 139 24 ; Align 259893 147 51 ; Align 259710 165 30 ; Align 259674 175 30 ; Align 259644 186 18 ; Align 194297 193 90 ; Align 194207 225 324 ; Align 181121 333 111 ; Align 181010 371 18 ; Align 180992 378 93 ; Align 180899 413 180 ; Align 53209 474 36 ; Align 53170 486 51 ; Align 53117 503 210 ; Align 52907 577 54 ; Align 52850 595 57 ; Align 52790 614 201 ; Align 52586 681 27 ; Align 52557 690 51 ; Align 52506 708 132 ; Align 52374 753 222 ; Align 52149 827 51 utg308_pilon exonerate:protein2genome:local gene 535143 535280 174 + . gene_id 0 ; sequence GL50803_32613-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 535143 535280 . + . utg308_pilon exonerate:protein2genome:local exon 535143 535280 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 535143 535280 174 + . alignment_id 0 ; Query GL50803_32613-t26_1-p1 ; Align 535143 2 138 utg11_pilon exonerate:protein2genome:local gene 1447844 1448086 320 + . gene_id 0 ; sequence GL50803_32621-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1447844 1448086 . + . utg11_pilon exonerate:protein2genome:local exon 1447844 1448086 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1447844 1448086 320 + . alignment_id 0 ; Query GL50803_32621-t26_1-p1 ; Align 1447844 1 243 utg349_pilon exonerate:protein2genome:local gene 709867 710028 186 - . gene_id 0 ; sequence GL50803_32624-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 709867 710028 . - . utg349_pilon exonerate:protein2genome:local exon 709867 710028 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 709867 710028 186 - . alignment_id 0 ; Query GL50803_32624-t26_1-p1 ; Align 710029 2 162 utg47_pilon exonerate:protein2genome:local gene 229589 230338 1117 - . gene_id 0 ; sequence GL50803_32657-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 229589 230338 . - . utg47_pilon exonerate:protein2genome:local exon 229589 230338 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 229589 230338 1117 - . alignment_id 0 ; Query GL50803_32657-t26_1-p1 ; Align 230339 1 750 utg47_pilon exonerate:protein2genome:local gene 232831 236127 5040 - . gene_id 0 ; sequence GL50803_32658-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 232831 236127 . - . utg47_pilon exonerate:protein2genome:local exon 232831 236127 . - . insertions 15 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 232831 236127 5040 - . alignment_id 0 ; Query GL50803_32658-t26_1-p1 ; Align 236128 1 1320 ; Align 234793 441 1431 ; Align 233362 919 531 utg212_pilon exonerate:protein2genome:local gene 488838 491518 3091 - . gene_id 0 ; sequence GL50803_32668-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 488838 491518 . - . utg212_pilon exonerate:protein2genome:local exon 488838 491518 . - . insertions 3 ; deletions 7 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 488838 491518 3091 - . alignment_id 0 ; Query GL50803_32668-t26_1-p1 ; Align 491519 1 1242 ; Align 490277 416 417 ; Align 489860 559 72 ; Align 489788 584 573 ; Align 489212 775 258 ; Align 488952 862 114 utg1966_pilon exonerate:protein2genome:local gene 82599 83378 573 + . gene_id 0 ; sequence GL50803_32673-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 82599 83378 . + . utg1966_pilon exonerate:protein2genome:local exon 82599 83378 . + . insertions 15 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 82599 83378 573 + . alignment_id 0 ; Query GL50803_32673-t26_1-p1 ; Align 82599 1 663 ; Align 83277 222 102 utg1966_pilon exonerate:protein2genome:local gene 82326 83378 1117 - . gene_id 0 ; sequence GL50803_32674-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 82326 83378 . - . utg1966_pilon exonerate:protein2genome:local exon 82326 83378 . - . insertions 15 ; deletions 1 utg1966_pilon exonerate:protein2genome:local similarity 82326 83378 1117 - . alignment_id 0 ; Query GL50803_32674-t26_1-p1 ; Align 83379 12 102 ; Align 83262 46 867 ; Align 82395 336 69 utg265_pilon exonerate:protein2genome:local gene 518779 519882 1383 - . gene_id 0 ; sequence GL50803_32676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 518779 519882 . - . utg265_pilon exonerate:protein2genome:local exon 518779 519882 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 518779 519882 1383 - . alignment_id 0 ; Query GL50803_32676-t26_1-p1 ; Align 519883 362 1104 utg265_pilon exonerate:protein2genome:local gene 491833 498614 9057 + . gene_id 0 ; sequence GL50803_32681-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 491833 498614 . + . utg265_pilon exonerate:protein2genome:local exon 491833 498614 . + . insertions 6 ; deletions 8 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 491833 498614 9057 + . alignment_id 0 ; Query GL50803_32681-t26_1-p1 ; Align 491833 214 1611 ; Align 493444 752 747 ; Align 494191 1002 489 ; Align 494683 1165 687 ; Align 495373 1394 138 ; Align 495511 1441 681 ; Align 496192 1669 1455 ; Align 497647 2157 255 ; Align 497904 2243 711 utg265_pilon exonerate:protein2genome:local gene 749230 749682 675 + . gene_id 0 ; sequence GL50803_32686-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 749230 749682 . + . utg265_pilon exonerate:protein2genome:local exon 749230 749682 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 749230 749682 675 + . alignment_id 0 ; Query GL50803_32686-t26_1-p1 ; Align 749230 218 453 utg349_pilon exonerate:protein2genome:local gene 658175 659203 1207 + . gene_id 0 ; sequence GL50803_3269-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 658175 659203 . + . utg349_pilon exonerate:protein2genome:local exon 658175 659203 . + . insertions 0 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 658175 659203 1207 + . alignment_id 0 ; Query GL50803_3269-t26_1-p1 ; Align 658175 1 312 ; Align 658487 108 21 ; Align 658508 117 696 utg11_pilon exonerate:protein2genome:local gene 81248 83296 3124 - . gene_id 0 ; sequence GL50803_32697-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 81248 83296 . - . utg11_pilon exonerate:protein2genome:local exon 81248 83296 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 81248 83296 3124 - . alignment_id 0 ; Query GL50803_32697-t26_1-p1 ; Align 83297 4 2049 utg47_pilon exonerate:protein2genome:local gene 1705861 1706145 316 + . gene_id 0 ; sequence GL50803_32701-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1705861 1706145 . + . utg47_pilon exonerate:protein2genome:local exon 1705861 1706145 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1705861 1706145 316 + . alignment_id 0 ; Query GL50803_32701-t26_1-p1 ; Align 1705861 3 285 utg47_pilon exonerate:protein2genome:local gene 1687039 1687323 316 - . gene_id 0 ; sequence GL50803_32701-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1687039 1687323 . - . utg47_pilon exonerate:protein2genome:local exon 1687039 1687323 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1687039 1687323 316 - . alignment_id 0 ; Query GL50803_32701-t26_1-p1 ; Align 1687324 3 285 utg47_pilon exonerate:protein2genome:local gene 819755 819868 146 - . gene_id 0 ; sequence GL50803_32711-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 819755 819868 . - . utg47_pilon exonerate:protein2genome:local exon 819755 819868 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 819755 819868 146 - . alignment_id 0 ; Query GL50803_32711-t26_1-p1 ; Align 819869 1 114 utg731_pilon exonerate:protein2genome:local gene 705663 705821 219 - . gene_id 0 ; sequence GL50803_32726-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 705663 705821 . - . utg731_pilon exonerate:protein2genome:local exon 705663 705821 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 705663 705821 219 - . alignment_id 0 ; Query GL50803_32726-t26_1-p1 ; Align 705822 1 159 utg47_pilon exonerate:protein2genome:local gene 758784 763800 7275 + . gene_id 0 ; sequence GL50803_32730-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 758784 763800 . + . utg47_pilon exonerate:protein2genome:local exon 758784 763800 . + . insertions 0 ; deletions 3 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 758784 763800 7275 + . alignment_id 0 ; Query GL50803_32730-t26_1-p1 ; Align 758784 1 2367 ; Align 761151 791 57 ; Align 761208 812 1185 ; Align 762394 1207 1407 utg18_pilon exonerate:protein2genome:local gene 236397 300862 3824 - . gene_id 0 ; sequence GL50803_32741-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 300800 300862 . - . utg18_pilon exonerate:protein2genome:local exon 300800 300862 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 300798 300799 . - . intron_id 1 ; splice_site "CT" utg18_pilon exonerate:protein2genome:local intron 239559 300799 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 239559 239560 . - . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 236397 239558 . - . utg18_pilon exonerate:protein2genome:local exon 236397 239558 . - . insertions 0 ; deletions 10 utg18_pilon exonerate:protein2genome:local similarity 236397 300862 3824 - . alignment_id 0 ; Query GL50803_32741-t26_1-p1 ; Align 300863 43 63 ; Align 239559 64 762 ; Align 238797 319 1302 ; Align 237495 754 549 ; Align 236946 940 60 ; Align 236886 964 15 ; Align 236871 970 474 utg18_pilon exonerate:protein2genome:local gene 308493 308654 114 - . gene_id 0 ; sequence GL50803_32744-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 308493 308654 . - . utg18_pilon exonerate:protein2genome:local exon 308493 308654 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 308493 308654 114 - . alignment_id 0 ; Query GL50803_32744-t26_1-p1 ; Align 308655 1 162 utg64_pilon exonerate:protein2genome:local gene 550353 550514 147 - . gene_id 0 ; sequence GL50803_32757-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 550353 550514 . - . utg64_pilon exonerate:protein2genome:local exon 550353 550514 . - . insertions 6 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 550353 550514 147 - . alignment_id 0 ; Query GL50803_32757-t26_1-p1 ; Align 550515 1 72 ; Align 550440 25 30 ; Align 550407 35 54 utg11_pilon exonerate:protein2genome:local gene 1575315 1575893 576 + . gene_id 0 ; sequence GL50803_32766-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1575315 1575893 . + . utg11_pilon exonerate:protein2genome:local exon 1575315 1575893 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1575315 1575893 576 + . alignment_id 0 ; Query GL50803_32766-t26_1-p1 ; Align 1575315 1 579 utg64_pilon exonerate:protein2genome:local gene 437708 437880 107 - . gene_id 0 ; sequence GL50803_32769-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 437708 437880 . - . utg64_pilon exonerate:protein2genome:local exon 437708 437880 . - . insertions 0 ; deletions 1 ; frameshifts 5 utg64_pilon exonerate:protein2genome:local similarity 437708 437880 107 - . alignment_id 0 ; Query GL50803_32769-t26_1-p1 ; Align 437881 171 96 ; Align 437780 203 39 ; Align 437741 217 33 utg64_pilon exonerate:protein2genome:local gene 535888 536109 260 - . gene_id 0 ; sequence GL50803_32775-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 535888 536109 . - . utg64_pilon exonerate:protein2genome:local exon 535888 536109 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 535888 536109 260 - . alignment_id 0 ; Query GL50803_32775-t26_1-p1 ; Align 536110 1 222 utg47_pilon exonerate:protein2genome:local gene 2264869 2266462 1635 + . gene_id 0 ; sequence GL50803_32778-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2264869 2266462 . + . utg47_pilon exonerate:protein2genome:local exon 2264869 2266462 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 2264869 2266462 1635 + . alignment_id 0 ; Query GL50803_32778-t26_1-p1 ; Align 2264869 57 219 ; Align 2265089 131 1374 utg64_pilon exonerate:protein2genome:local gene 313169 314932 2230 + . gene_id 0 ; sequence GL50803_32786-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 313169 314932 . + . utg64_pilon exonerate:protein2genome:local exon 313169 314932 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 313169 314932 2230 + . alignment_id 0 ; Query GL50803_32786-t26_1-p1 ; Align 313169 1 1764 utg308_pilon exonerate:protein2genome:local gene 631629 632568 1581 - . gene_id 0 ; sequence GL50803_3279-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 631629 632568 . - . utg308_pilon exonerate:protein2genome:local exon 631629 632568 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 631629 632568 1581 - . alignment_id 0 ; Query GL50803_3279-t26_1-p1 ; Align 632569 1 867 ; Align 631701 290 72 utg64_pilon exonerate:protein2genome:local gene 461554 462189 839 - . gene_id 0 ; sequence GL50803_32801-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 461554 462189 . - . utg64_pilon exonerate:protein2genome:local exon 461554 462189 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 461554 462189 839 - . alignment_id 0 ; Query GL50803_32801-t26_1-p1 ; Align 462190 1 561 ; Align 461629 189 75 utg308_pilon exonerate:protein2genome:local gene 632689 634089 2407 - . gene_id 0 ; sequence GL50803_3281-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 632689 634089 . - . utg308_pilon exonerate:protein2genome:local exon 632689 634089 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 632689 634089 2407 - . alignment_id 0 ; Query GL50803_3281-t26_1-p1 ; Align 634090 1 1401 utg364_pilon exonerate:protein2genome:local gene 1656 55182 1425 - . gene_id 0 ; sequence GL50803_32815-t26_1-p1 ; gene_orientation + utg364_pilon exonerate:protein2genome:local cds 54259 55182 . - . utg364_pilon exonerate:protein2genome:local exon 54259 55182 . - . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local splice5 54257 54258 . - . intron_id 1 ; splice_site "GT" utg364_pilon exonerate:protein2genome:local intron 49751 54258 . - . intron_id 1 utg364_pilon exonerate:protein2genome:local splice3 49751 49752 . - . intron_id 0 ; splice_site "AG" utg364_pilon exonerate:protein2genome:local cds 49522 49750 . - . utg364_pilon exonerate:protein2genome:local exon 49522 49750 . - . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local splice5 49520 49521 . - . intron_id 2 ; splice_site "GA" utg364_pilon exonerate:protein2genome:local intron 1781 49521 . - . intron_id 2 utg364_pilon exonerate:protein2genome:local splice3 1781 1782 . - . intron_id 1 ; splice_site "AG" utg364_pilon exonerate:protein2genome:local cds 1656 1780 . - . utg364_pilon exonerate:protein2genome:local exon 1656 1780 . - . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 1656 55182 1425 - . alignment_id 0 ; Query GL50803_32815-t26_1-p1 ; Align 55183 1 924 ; Align 49751 309 228 ; Align 1779 386 123 utg99_pilon exonerate:protein2genome:local gene 203766 203988 126 - . gene_id 0 ; sequence GL50803_32822-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 203766 203988 . - . utg99_pilon exonerate:protein2genome:local exon 203766 203988 . - . insertions 0 ; deletions 2 ; frameshifts 4 utg99_pilon exonerate:protein2genome:local similarity 203766 203988 126 - . alignment_id 0 ; Query GL50803_32822-t26_1-p1 ; Align 203989 1 60 ; Align 203929 22 3 ; Align 203924 23 51 ; Align 203873 41 9 ; Align 203862 44 96 utg349_pilon exonerate:protein2genome:local gene 111901 114702 3335 + . gene_id 0 ; sequence GL50803_32828-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 111901 112252 . + . utg349_pilon exonerate:protein2genome:local exon 111901 112252 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 112253 112254 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 112253 112282 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 112281 112282 . + . intron_id 0 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local cds 112283 114702 . + . utg349_pilon exonerate:protein2genome:local exon 112283 114702 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 111901 114702 3335 + . alignment_id 0 ; Query GL50803_32828-t26_1-p1 ; Align 111901 1 351 ; Align 112285 119 2418 utg11_pilon exonerate:protein2genome:local gene 504002 504574 808 + . gene_id 0 ; sequence GL50803_32838-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 504002 504574 . + . utg11_pilon exonerate:protein2genome:local exon 504002 504574 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 504002 504574 808 + . alignment_id 0 ; Query GL50803_32838-t26_1-p1 ; Align 504002 7 573 utg47_pilon exonerate:protein2genome:local gene 1569144 1569431 258 + . gene_id 0 ; sequence GL50803_3285-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1569144 1569431 . + . utg47_pilon exonerate:protein2genome:local exon 1569144 1569431 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1569144 1569431 258 + . alignment_id 0 ; Query GL50803_3285-t26_1-p1 ; Align 1569144 1 288 utg308_pilon exonerate:protein2genome:local gene 593557 594111 739 + . gene_id 0 ; sequence GL50803_32861-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 593557 594111 . + . utg308_pilon exonerate:protein2genome:local exon 593557 594111 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 593557 594111 739 + . alignment_id 0 ; Query GL50803_32861-t26_1-p1 ; Align 593557 2 555 utg47_pilon exonerate:protein2genome:local gene 1566353 1567585 1693 + . gene_id 0 ; sequence GL50803_3287-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1566353 1567585 . + . utg47_pilon exonerate:protein2genome:local exon 1566353 1567585 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1566353 1567585 1693 + . alignment_id 0 ; Query GL50803_3287-t26_1-p1 ; Align 1566353 1 1233 utg11_pilon exonerate:protein2genome:local gene 1664553 1664639 106 + . gene_id 0 ; sequence GL50803_32874-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1664553 1664639 . + . utg11_pilon exonerate:protein2genome:local exon 1664553 1664639 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1664553 1664639 106 + . alignment_id 0 ; Query GL50803_32874-t26_1-p1 ; Align 1664553 1 87 utg11_pilon exonerate:protein2genome:local gene 1684336 1684443 131 - . gene_id 0 ; sequence GL50803_32875-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1684336 1684443 . - . utg11_pilon exonerate:protein2genome:local exon 1684336 1684443 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1684336 1684443 131 - . alignment_id 0 ; Query GL50803_32875-t26_1-p1 ; Align 1684444 1 108 utg11_pilon exonerate:protein2genome:local gene 1710637 1714776 5090 + . gene_id 0 ; sequence GL50803_32879-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1710637 1714192 . + . utg11_pilon exonerate:protein2genome:local exon 1710637 1714192 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1714193 1714194 . + . intron_id 1 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local intron 1714193 1714243 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1714242 1714243 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1714244 1714776 . + . utg11_pilon exonerate:protein2genome:local exon 1714244 1714776 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1710637 1714776 5090 + . alignment_id 0 ; Query GL50803_32879-t26_1-p1 ; Align 1710637 1 3504 ; Align 1714144 1169 48 ; Align 1714246 1186 531 utg349_pilon exonerate:protein2genome:local gene 44569 146804 728 + . gene_id 0 ; sequence GL50803_32890-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 44569 45005 . + . utg349_pilon exonerate:protein2genome:local exon 44569 45005 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local splice5 45006 45007 . + . intron_id 1 ; splice_site "CG" utg349_pilon exonerate:protein2genome:local intron 45006 146644 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 146643 146644 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 146645 146804 . + . utg349_pilon exonerate:protein2genome:local exon 146645 146804 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 44569 146804 728 + . alignment_id 0 ; Query GL50803_32890-t26_1-p1 ; Align 44569 1 42 ; Align 44611 17 393 ; Align 146646 149 159 utg11_pilon exonerate:protein2genome:local gene 1093783 1096101 2775 + . gene_id 0 ; sequence GL50803_32893-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1093783 1096101 . + . utg11_pilon exonerate:protein2genome:local exon 1093783 1096101 . + . insertions 0 ; deletions 6 utg11_pilon exonerate:protein2genome:local similarity 1093783 1096101 2775 + . alignment_id 0 ; Query GL50803_32893-t26_1-p1 ; Align 1093783 1 444 ; Align 1094227 150 18 ; Align 1094245 157 783 ; Align 1095028 419 708 ; Align 1095736 658 366 utg11_pilon exonerate:protein2genome:local gene 1112794 1112982 217 - . gene_id 0 ; sequence GL50803_32896-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1112794 1112982 . - . utg11_pilon exonerate:protein2genome:local exon 1112794 1112982 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1112794 1112982 217 - . alignment_id 0 ; Query GL50803_32896-t26_1-p1 ; Align 1112983 3 189 utg11_pilon exonerate:protein2genome:local gene 1123164 1123271 123 + . gene_id 0 ; sequence GL50803_32898-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1123164 1123271 . + . utg11_pilon exonerate:protein2genome:local exon 1123164 1123271 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1123164 1123271 123 + . alignment_id 0 ; Query GL50803_32898-t26_1-p1 ; Align 1123164 1 108 utg731_pilon exonerate:protein2genome:local gene 1381697 1385617 4883 + . gene_id 0 ; sequence GL50803_3290-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1381697 1385617 . + . utg731_pilon exonerate:protein2genome:local exon 1381697 1385617 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1381697 1385617 4883 + . alignment_id 0 ; Query GL50803_3290-t26_1-p1 ; Align 1381697 1 3921 utg11_pilon exonerate:protein2genome:local gene 688946 690262 1704 + . gene_id 0 ; sequence GL50803_32908-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 688946 690262 . + . utg11_pilon exonerate:protein2genome:local exon 688946 690262 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 688946 690262 1704 + . alignment_id 0 ; Query GL50803_32908-t26_1-p1 ; Align 688946 1 1317 utg731_pilon exonerate:protein2genome:local gene 1381097 1381690 763 - . gene_id 0 ; sequence GL50803_3291-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1381097 1381690 . - . utg731_pilon exonerate:protein2genome:local exon 1381097 1381690 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1381097 1381690 763 - . alignment_id 0 ; Query GL50803_3291-t26_1-p1 ; Align 1381691 1 594 utg11_pilon exonerate:protein2genome:local gene 728507 730119 1800 - . gene_id 0 ; sequence GL50803_32911-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 728507 730119 . - . utg11_pilon exonerate:protein2genome:local exon 728507 730119 . - . insertions 3 ; deletions 1 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 728507 730119 1800 - . alignment_id 0 ; Query GL50803_32911-t26_1-p1 ; Align 730120 6 1362 ; Align 728755 460 108 ; Align 728645 496 9 ; Align 728636 500 129 utg11_pilon exonerate:protein2genome:local gene 462549 465112 2625 + . gene_id 0 ; sequence GL50803_32914-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 462549 465112 . + . utg11_pilon exonerate:protein2genome:local exon 462549 465112 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 462549 465112 2625 + . alignment_id 0 ; Query GL50803_32914-t26_1-p1 ; Align 462549 1 39 ; Align 462589 14 108 ; Align 462697 51 27 ; Align 462725 60 2388 utg47_pilon exonerate:protein2genome:local gene 869001 869279 346 + . gene_id 0 ; sequence GL50803_32916-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 869001 869279 . + . utg47_pilon exonerate:protein2genome:local exon 869001 869279 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 869001 869279 346 + . alignment_id 0 ; Query GL50803_32916-t26_1-p1 ; Align 869001 4 279 utg18_pilon exonerate:protein2genome:local gene 328242 328403 215 + . gene_id 0 ; sequence GL50803_32933-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 328242 328403 . + . utg18_pilon exonerate:protein2genome:local exon 328242 328403 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 328242 328403 215 + . alignment_id 0 ; Query GL50803_32933-t26_1-p1 ; Align 328242 2 162 utg18_pilon exonerate:protein2genome:local gene 322451 322612 215 - . gene_id 0 ; sequence GL50803_32933-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 322451 322612 . - . utg18_pilon exonerate:protein2genome:local exon 322451 322612 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 322451 322612 215 - . alignment_id 0 ; Query GL50803_32933-t26_1-p1 ; Align 322613 2 162 utg18_pilon exonerate:protein2genome:local gene 78509 81502 3410 + . gene_id 0 ; sequence GL50803_32938-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 78509 81502 . + . utg18_pilon exonerate:protein2genome:local exon 78509 81502 . + . insertions 30 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 78509 81502 3410 + . alignment_id 0 ; Query GL50803_32938-t26_1-p1 ; Align 78509 1 111 ; Align 78623 38 303 ; Align 78935 139 111 ; Align 79049 176 639 ; Align 79691 389 843 ; Align 80540 670 36 ; Align 80582 682 921 utg731_pilon exonerate:protein2genome:local gene 1379048 1379641 886 - . gene_id 0 ; sequence GL50803_3294-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1379048 1379641 . - . utg731_pilon exonerate:protein2genome:local exon 1379048 1379641 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1379048 1379641 886 - . alignment_id 0 ; Query GL50803_3294-t26_1-p1 ; Align 1379642 1 477 ; Align 1379162 160 114 utg265_pilon exonerate:protein2genome:local gene 869939 884058 695 - . gene_id 0 ; sequence GL50803_32958-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 883938 884058 . - . utg265_pilon exonerate:protein2genome:local exon 883938 884058 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 883936 883937 . - . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 871588 883937 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 871588 871589 . - . intron_id 0 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local cds 871084 871587 . - . utg265_pilon exonerate:protein2genome:local exon 871084 871587 . - . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local splice5 871082 871083 . - . intron_id 2 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 870289 871083 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 870289 870290 . - . intron_id 1 ; splice_site "CG" utg265_pilon exonerate:protein2genome:local cds 870149 870288 . - . utg265_pilon exonerate:protein2genome:local exon 870149 870288 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 870147 870148 . - . intron_id 3 ; splice_site "AT" utg265_pilon exonerate:protein2genome:local intron 870116 870148 . - . intron_id 3 utg265_pilon exonerate:protein2genome:local splice3 870116 870117 . - . intron_id 2 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 869939 870115 . - . utg265_pilon exonerate:protein2genome:local exon 869939 870115 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 869939 884058 695 - . alignment_id 0 ; Query GL50803_32958-t26_1-p1 ; Align 884059 5 120 ; Align 871586 46 69 ; Align 871517 73 432 ; Align 870287 218 138 ; Align 870116 264 177 utg47_pilon exonerate:protein2genome:local gene 1937788 1939167 1577 + . gene_id 0 ; sequence GL50803_32999-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1937788 1939167 . + . utg47_pilon exonerate:protein2genome:local exon 1937788 1939167 . + . insertions 12 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 1937788 1939167 1577 + . alignment_id 0 ; Query GL50803_32999-t26_1-p1 ; Align 1937788 2 132 ; Align 1937923 46 96 ; Align 1938019 79 558 ; Align 1938583 265 372 ; Align 1938955 391 36 ; Align 1938991 404 39 ; Align 1939033 417 135 utg731_pilon exonerate:protein2genome:local gene 812117 813145 867 - . gene_id 0 ; sequence GL50803_33020-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 812117 813145 . - . utg731_pilon exonerate:protein2genome:local exon 812117 813145 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 812117 813145 867 - . alignment_id 0 ; Query GL50803_33020-t26_1-p1 ; Align 813146 1 171 ; Align 812975 60 858 utg18_pilon exonerate:protein2genome:local gene 384144 384908 1168 - . gene_id 0 ; sequence GL50803_33022-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 384144 384908 . - . utg18_pilon exonerate:protein2genome:local exon 384144 384908 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 384144 384908 1168 - . alignment_id 0 ; Query GL50803_33022-t26_1-p1 ; Align 384909 1 765 utg18_pilon exonerate:protein2genome:local gene 383188 383997 1173 - . gene_id 0 ; sequence GL50803_33023-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 383188 383997 . - . utg18_pilon exonerate:protein2genome:local exon 383188 383997 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 383188 383997 1173 - . alignment_id 0 ; Query GL50803_33023-t26_1-p1 ; Align 383998 1 810 utg11_pilon exonerate:protein2genome:local gene 1415883 1416125 287 - . gene_id 0 ; sequence GL50803_33029-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1415883 1416125 . - . utg11_pilon exonerate:protein2genome:local exon 1415883 1416125 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1415883 1416125 287 - . alignment_id 0 ; Query GL50803_33029-t26_1-p1 ; Align 1416126 1 243 utg11_pilon exonerate:protein2genome:local gene 1413849 1415288 2002 - . gene_id 0 ; sequence GL50803_33030-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1413849 1415288 . - . utg11_pilon exonerate:protein2genome:local exon 1413849 1415288 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1413849 1415288 2002 - . alignment_id 0 ; Query GL50803_33030-t26_1-p1 ; Align 1415289 1 1440 utg11_pilon exonerate:protein2genome:local gene 1414059 1414268 164 + . gene_id 0 ; sequence GL50803_33031-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1414059 1414268 . + . utg11_pilon exonerate:protein2genome:local exon 1414059 1414268 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1414059 1414268 164 + . alignment_id 0 ; Query GL50803_33031-t26_1-p1 ; Align 1414059 1 210 utg99_pilon exonerate:protein2genome:local gene 376655 378305 2554 + . gene_id 0 ; sequence GL50803_33037-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 376655 378305 . + . utg99_pilon exonerate:protein2genome:local exon 376655 378305 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg99_pilon exonerate:protein2genome:local similarity 376655 378305 2554 + . alignment_id 0 ; Query GL50803_33037-t26_1-p1 ; Align 376655 1 132 ; Align 376788 45 1518 utg11_pilon exonerate:protein2genome:local gene 299775 300995 1178 + . gene_id 0 ; sequence GL50803_3307-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 299775 300995 . + . utg11_pilon exonerate:protein2genome:local exon 299775 300995 . + . insertions 0 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 299775 300995 1178 + . alignment_id 0 ; Query GL50803_3307-t26_1-p1 ; Align 299775 1 336 ; Align 300111 115 276 ; Align 300387 208 102 ; Align 300489 244 507 utg731_pilon exonerate:protein2genome:local gene 1226707 1226832 158 + . gene_id 0 ; sequence GL50803_33074-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1226707 1226832 . + . utg731_pilon exonerate:protein2genome:local exon 1226707 1226832 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1226707 1226832 158 + . alignment_id 0 ; Query GL50803_33074-t26_1-p1 ; Align 1226707 1 126 utg349_pilon exonerate:protein2genome:local gene 32395 36813 5494 + . gene_id 0 ; sequence GL50803_33083-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 32395 36813 . + . utg349_pilon exonerate:protein2genome:local exon 32395 36813 . + . insertions 9 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 32395 36813 5494 + . alignment_id 0 ; Query GL50803_33083-t26_1-p1 ; Align 32395 1 975 ; Align 33370 327 303 ; Align 33673 430 864 ; Align 34543 718 585 ; Align 35128 914 330 ; Align 35461 1024 1353 utg64_pilon exonerate:protein2genome:local gene 263770 264903 1639 - . gene_id 0 ; sequence GL50803_3313-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 263770 264903 . - . utg64_pilon exonerate:protein2genome:local exon 263770 264903 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 263770 264903 1639 - . alignment_id 0 ; Query GL50803_3313-t26_1-p1 ; Align 264904 1 1134 utg99_pilon exonerate:protein2genome:local gene 363792 367520 5164 + . gene_id 0 ; sequence GL50803_33166-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 363792 365579 . + . utg99_pilon exonerate:protein2genome:local exon 363792 365579 . + . insertions 0 ; deletions 2 utg99_pilon exonerate:protein2genome:local splice5 365580 365581 . + . intron_id 1 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 365580 365612 . + . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 365611 365612 . + . intron_id 0 ; splice_site "AC" utg99_pilon exonerate:protein2genome:local cds 365613 367520 . + . utg99_pilon exonerate:protein2genome:local exon 365613 367520 . + . insertions 6 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 363792 367520 5164 + . alignment_id 0 ; Query GL50803_33166-t26_1-p1 ; Align 363792 1 1740 ; Align 365532 583 48 ; Align 365613 599 54 ; Align 365670 617 897 ; Align 366570 916 951 utg349_pilon exonerate:protein2genome:local gene 1416092 1416237 120 + . gene_id 0 ; sequence GL50803_33202-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1416092 1416237 . + . utg349_pilon exonerate:protein2genome:local exon 1416092 1416237 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 1416092 1416237 120 + . alignment_id 0 ; Query GL50803_33202-t26_1-p1 ; Align 1416092 1 90 ; Align 1416184 31 9 ; Align 1416193 35 45 utg349_pilon exonerate:protein2genome:local gene 911815 912024 130 + . gene_id 0 ; sequence GL50803_33216-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 911815 912024 . + . utg349_pilon exonerate:protein2genome:local exon 911815 912024 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 911815 912024 130 + . alignment_id 0 ; Query GL50803_33216-t26_1-p1 ; Align 911815 1 210 utg349_pilon exonerate:protein2genome:local gene 891168 893438 3725 + . gene_id 0 ; sequence GL50803_33218-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 891168 893438 . + . utg349_pilon exonerate:protein2genome:local exon 891168 893438 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 891168 893438 3725 + . alignment_id 0 ; Query GL50803_33218-t26_1-p1 ; Align 891168 1 2271 utg64_pilon exonerate:protein2genome:local gene 129045 129557 613 - . gene_id 0 ; sequence GL50803_33230-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 129045 129557 . - . utg64_pilon exonerate:protein2genome:local exon 129045 129557 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 129045 129557 613 - . alignment_id 0 ; Query GL50803_33230-t26_1-p1 ; Align 129558 1 513 utg64_pilon exonerate:protein2genome:local gene 134069 134812 720 + . gene_id 0 ; sequence GL50803_33232-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 134069 134812 . + . utg64_pilon exonerate:protein2genome:local exon 134069 134812 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 134069 134812 720 + . alignment_id 0 ; Query GL50803_33232-t26_1-p1 ; Align 134069 1 393 ; Align 134465 132 348 utg308_pilon exonerate:protein2genome:local gene 891994 892737 720 + . gene_id 0 ; sequence GL50803_33232-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 891994 892737 . + . utg308_pilon exonerate:protein2genome:local exon 891994 892737 . + . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 891994 892737 720 + . alignment_id 0 ; Query GL50803_33232-t26_1-p1 ; Align 891994 1 393 ; Align 892390 132 348 utg47_pilon exonerate:protein2genome:local gene 1699424 2022646 1898 - . gene_id 0 ; sequence GL50803_33279-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2022592 2022646 . - . utg47_pilon exonerate:protein2genome:local exon 2022592 2022646 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 2022590 2022591 . - . intron_id 1 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 2022503 2022591 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 2022503 2022504 . - . intron_id 0 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 2022153 2022502 . - . utg47_pilon exonerate:protein2genome:local exon 2022153 2022502 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 2022151 2022152 . - . intron_id 2 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 2022059 2022152 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 2022059 2022060 . - . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2021253 2022058 . - . utg47_pilon exonerate:protein2genome:local exon 2021253 2022058 . - . insertions 12 ; deletions 18 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local splice5 2021251 2021252 . - . intron_id 3 ; splice_site "TT" utg47_pilon exonerate:protein2genome:local intron 1914521 2021252 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 1914521 1914522 . - . intron_id 2 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 1913791 1914520 . - . utg47_pilon exonerate:protein2genome:local exon 1913791 1914520 . - . insertions 6 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 1913789 1913790 . - . intron_id 4 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 1828857 1913790 . - . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 1828857 1828858 . - . intron_id 3 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1828798 1828856 . - . utg47_pilon exonerate:protein2genome:local exon 1828798 1828856 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 1828796 1828797 . - . intron_id 5 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 1699555 1828797 . - . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 1699555 1699556 . - . intron_id 4 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 1699424 1699554 . - . utg47_pilon exonerate:protein2genome:local exon 1699424 1699554 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1699424 2022646 1898 - . alignment_id 0 ; Query GL50803_33279-t26_1-p1 ; Align 2022647 20 54 ; Align 2022501 39 231 ; Align 2022270 119 117 ; Align 2022059 158 96 ; Align 2021963 193 159 ; Align 2021804 249 45 ; Align 2021756 264 60 ; Align 2021696 287 51 ; Align 2021644 304 54 ; Align 2021590 325 45 ; Align 2021542 340 60 ; Align 2021482 363 45 ; Align 2021434 378 60 ; Align 2021374 401 45 ; Align 2021326 416 72 ; Align 1914519 441 291 ; Align 1914225 538 51 ; Align 1914171 555 180 ; Align 1913991 616 51 ; Align 1913940 634 39 ; Align 1913901 648 108 ; Align 1828856 685 18 ; Align 1828838 692 39 ; Align 1699553 706 129 utg349_pilon exonerate:protein2genome:local gene 1015950 1017662 1806 + . gene_id 0 ; sequence GL50803_33281-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1015950 1017662 . + . utg349_pilon exonerate:protein2genome:local exon 1015950 1017662 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 1015950 1017662 1806 + . alignment_id 0 ; Query GL50803_33281-t26_1-p1 ; Align 1015950 1 1458 ; Align 1017408 489 255 utg349_pilon exonerate:protein2genome:local gene 865949 866941 1629 + . gene_id 0 ; sequence GL50803_3331-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 865949 866941 . + . utg349_pilon exonerate:protein2genome:local exon 865949 866941 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 865949 866941 1629 + . alignment_id 0 ; Query GL50803_3331-t26_1-p1 ; Align 865949 1 993 utg308_pilon exonerate:protein2genome:local gene 960110 960253 188 + . gene_id 0 ; sequence GL50803_33348-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 960110 960253 . + . utg308_pilon exonerate:protein2genome:local exon 960110 960253 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 960110 960253 188 + . alignment_id 0 ; Query GL50803_33348-t26_1-p1 ; Align 960110 2 144 utg47_pilon exonerate:protein2genome:local gene 1110008 1110973 1354 - . gene_id 0 ; sequence GL50803_3341-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1110008 1110973 . - . utg47_pilon exonerate:protein2genome:local exon 1110008 1110973 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1110008 1110973 1354 - . alignment_id 0 ; Query GL50803_3341-t26_1-p1 ; Align 1110974 1 39 ; Align 1110935 15 927 utg47_pilon exonerate:protein2genome:local gene 1111009 1114014 4319 - . gene_id 0 ; sequence GL50803_3342-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1111009 1114014 . - . utg47_pilon exonerate:protein2genome:local exon 1111009 1114014 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1111009 1114014 4319 - . alignment_id 0 ; Query GL50803_3342-t26_1-p1 ; Align 1114015 1 3006 utg47_pilon exonerate:protein2genome:local gene 1527103 1527796 902 + . gene_id 0 ; sequence GL50803_33433-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1527103 1527796 . + . utg47_pilon exonerate:protein2genome:local exon 1527103 1527796 . + . insertions 3 ; deletions 3 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1527103 1527796 902 + . alignment_id 0 ; Query GL50803_33433-t26_1-p1 ; Align 1527103 1 117 ; Align 1527221 40 378 ; Align 1527602 166 81 ; Align 1527683 196 114 utg47_pilon exonerate:protein2genome:local gene 1529548 1530924 2101 + . gene_id 0 ; sequence GL50803_33434-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1529548 1530924 . + . utg47_pilon exonerate:protein2genome:local exon 1529548 1530924 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1529548 1530924 2101 + . alignment_id 0 ; Query GL50803_33434-t26_1-p1 ; Align 1529548 1 1377 utg47_pilon exonerate:protein2genome:local gene 1115309 1115776 563 - . gene_id 0 ; sequence GL50803_3345-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1115309 1115776 . - . utg47_pilon exonerate:protein2genome:local exon 1115309 1115776 . - . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 1115309 1115776 563 - . alignment_id 0 ; Query GL50803_3345-t26_1-p1 ; Align 1115777 1 261 ; Align 1115516 93 207 utg731_pilon exonerate:protein2genome:local gene 1274771 1274989 273 - . gene_id 0 ; sequence GL50803_33477-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1274771 1274989 . - . utg731_pilon exonerate:protein2genome:local exon 1274771 1274989 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1274771 1274989 273 - . alignment_id 0 ; Query GL50803_33477-t26_1-p1 ; Align 1274990 1 219 utg308_pilon exonerate:protein2genome:local gene 196479 197027 879 + . gene_id 0 ; sequence GL50803_3349-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 196479 197027 . + . utg308_pilon exonerate:protein2genome:local exon 196479 197027 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 196479 197027 879 + . alignment_id 0 ; Query GL50803_3349-t26_1-p1 ; Align 196479 1 549 utg64_pilon exonerate:protein2genome:local gene 906257 907723 1900 - . gene_id 0 ; sequence GL50803_33513-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 906257 907723 . - . utg64_pilon exonerate:protein2genome:local exon 906257 907723 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 906257 907723 1900 - . alignment_id 0 ; Query GL50803_33513-t26_1-p1 ; Align 907724 1 1467 utg265_pilon exonerate:protein2genome:local gene 1059251 1059460 155 - . gene_id 0 ; sequence GL50803_33542-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1059251 1059460 . - . utg265_pilon exonerate:protein2genome:local exon 1059251 1059460 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1059251 1059460 155 - . alignment_id 0 ; Query GL50803_33542-t26_1-p1 ; Align 1059461 2 210 utg1966_pilon exonerate:protein2genome:local gene 35838 35936 103 - . gene_id 0 ; sequence GL50803_33559-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 35838 35936 . - . utg1966_pilon exonerate:protein2genome:local exon 35838 35936 . - . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 35838 35936 103 - . alignment_id 0 ; Query GL50803_33559-t26_1-p1 ; Align 35937 1 99 utg11_pilon exonerate:protein2genome:local gene 746833 749245 3964 - . gene_id 0 ; sequence GL50803_33592-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 746833 749245 . - . utg11_pilon exonerate:protein2genome:local exon 746833 749245 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 746833 749245 3964 - . alignment_id 0 ; Query GL50803_33592-t26_1-p1 ; Align 749246 1 1131 ; Align 748114 378 1281 utg265_pilon exonerate:protein2genome:local gene 449198 449329 112 - . gene_id 0 ; sequence GL50803_33628-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 449198 449329 . - . utg265_pilon exonerate:protein2genome:local exon 449198 449329 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 449198 449329 112 - . alignment_id 0 ; Query GL50803_33628-t26_1-p1 ; Align 449330 3 132 utg265_pilon exonerate:protein2genome:local gene 624006 624791 899 - . gene_id 0 ; sequence GL50803_33629-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 624006 624791 . - . utg265_pilon exonerate:protein2genome:local exon 624006 624791 . - . insertions 15 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 624006 624791 899 - . alignment_id 0 ; Query GL50803_33629-t26_1-p1 ; Align 624792 1 456 ; Align 624321 153 315 utg47_pilon exonerate:protein2genome:local gene 620715 620834 140 + . gene_id 0 ; sequence GL50803_33632-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 620715 620834 . + . utg47_pilon exonerate:protein2genome:local exon 620715 620834 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 620715 620834 140 + . alignment_id 0 ; Query GL50803_33632-t26_1-p1 ; Align 620715 1 120 utg47_pilon exonerate:protein2genome:local gene 1562408 1565215 3826 - . gene_id 0 ; sequence GL50803_33660-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1562408 1565215 . - . utg47_pilon exonerate:protein2genome:local exon 1562408 1565215 . - . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1562408 1565215 3826 - . alignment_id 0 ; Query GL50803_33660-t26_1-p1 ; Align 1565216 1 2742 ; Align 1562468 915 60 utg47_pilon exonerate:protein2genome:local gene 1635446 1638556 4440 + . gene_id 0 ; sequence GL50803_33663-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1635446 1638556 . + . utg47_pilon exonerate:protein2genome:local exon 1635446 1638556 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1635446 1638556 4440 + . alignment_id 0 ; Query GL50803_33663-t26_1-p1 ; Align 1635446 1 3111 utg18_pilon exonerate:protein2genome:local gene 54170 54646 741 + . gene_id 0 ; sequence GL50803_3367-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 54170 54646 . + . utg18_pilon exonerate:protein2genome:local exon 54170 54646 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 54170 54646 741 + . alignment_id 0 ; Query GL50803_3367-t26_1-p1 ; Align 54170 1 477 utg47_pilon exonerate:protein2genome:local gene 1312062 1312184 111 + . gene_id 0 ; sequence GL50803_33671-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1312062 1312184 . + . utg47_pilon exonerate:protein2genome:local exon 1312062 1312184 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1312062 1312184 111 + . alignment_id 0 ; Query GL50803_33671-t26_1-p1 ; Align 1312062 1 123 utg47_pilon exonerate:protein2genome:local gene 1299780 1301888 3210 + . gene_id 0 ; sequence GL50803_33672-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1299780 1301888 . + . utg47_pilon exonerate:protein2genome:local exon 1299780 1301888 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1299780 1301888 3210 + . alignment_id 0 ; Query GL50803_33672-t26_1-p1 ; Align 1299780 1 477 ; Align 1300260 160 1629 utg47_pilon exonerate:protein2genome:local gene 1354995 1356814 1811 + . gene_id 0 ; sequence GL50803_33674-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1354995 1356814 . + . utg47_pilon exonerate:protein2genome:local exon 1354995 1356814 . + . insertions 12 ; deletions 5 ; frameshifts 5 utg47_pilon exonerate:protein2genome:local similarity 1354995 1356814 1811 + . alignment_id 0 ; Query GL50803_33674-t26_1-p1 ; Align 1354995 1 318 ; Align 1355325 107 654 ; Align 1355979 328 456 ; Align 1356440 480 21 ; Align 1356461 489 354 utg11_pilon exonerate:protein2genome:local gene 236790 240011 5147 + . gene_id 0 ; sequence GL50803_33685-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 236790 240011 . + . utg11_pilon exonerate:protein2genome:local exon 236790 240011 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 236790 240011 5147 + . alignment_id 0 ; Query GL50803_33685-t26_1-p1 ; Align 236790 1 3183 ; Align 239973 1063 39 utg731_pilon exonerate:protein2genome:local gene 401414 403513 3269 - . gene_id 0 ; sequence GL50803_33689-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 401414 403513 . - . utg731_pilon exonerate:protein2genome:local exon 401414 403513 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 401414 403513 3269 - . alignment_id 0 ; Query GL50803_33689-t26_1-p1 ; Align 403514 1 2100 utg18_pilon exonerate:protein2genome:local gene 53109 53678 695 - . gene_id 0 ; sequence GL50803_3370-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 53109 53678 . - . utg18_pilon exonerate:protein2genome:local exon 53109 53678 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 53109 53678 695 - . alignment_id 0 ; Query GL50803_3370-t26_1-p1 ; Align 53679 1 570 utg47_pilon exonerate:protein2genome:local gene 1812764 1812877 108 - . gene_id 0 ; sequence GL50803_33712-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1812764 1812877 . - . utg47_pilon exonerate:protein2genome:local exon 1812764 1812877 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1812764 1812877 108 - . alignment_id 0 ; Query GL50803_33712-t26_1-p1 ; Align 1812878 3 114 utg18_pilon exonerate:protein2genome:local gene 51770 53053 1616 + . gene_id 0 ; sequence GL50803_3372-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 51770 53053 . + . utg18_pilon exonerate:protein2genome:local exon 51770 53053 . + . insertions 0 ; deletions 3 utg18_pilon exonerate:protein2genome:local similarity 51770 53053 1616 + . alignment_id 0 ; Query GL50803_3372-t26_1-p1 ; Align 51770 1 72 ; Align 51842 28 1212 utg99_pilon exonerate:protein2genome:local gene 472707 473483 814 + . gene_id 0 ; sequence GL50803_33721-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 472707 473483 . + . utg99_pilon exonerate:protein2genome:local exon 472707 473483 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 472707 473483 814 + . alignment_id 0 ; Query GL50803_33721-t26_1-p1 ; Align 472707 2 777 utg349_pilon exonerate:protein2genome:local gene 1486993 1487895 1570 - . gene_id 0 ; sequence GL50803_33762-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1486993 1487895 . - . utg349_pilon exonerate:protein2genome:local exon 1486993 1487895 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1486993 1487895 1570 - . alignment_id 0 ; Query GL50803_33762-t26_1-p1 ; Align 1487896 1 903 utg47_pilon exonerate:protein2genome:local gene 1982441 1983860 2208 + . gene_id 0 ; sequence GL50803_33769-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1982441 1983860 . + . utg47_pilon exonerate:protein2genome:local exon 1982441 1983860 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1982441 1983860 2208 + . alignment_id 0 ; Query GL50803_33769-t26_1-p1 ; Align 1982441 12 1239 ; Align 1983681 425 180 utg349_pilon exonerate:protein2genome:local gene 82073 89176 446 + . gene_id 0 ; sequence GL50803_3378-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 82073 82240 . + . utg349_pilon exonerate:protein2genome:local exon 82073 82240 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 82241 82242 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 82241 87747 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 87746 87747 . + . intron_id 0 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local cds 87748 87876 . + . utg349_pilon exonerate:protein2genome:local exon 87748 87876 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 87877 87878 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 87877 88951 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 88950 88951 . + . intron_id 1 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local cds 88952 89176 . + . utg349_pilon exonerate:protein2genome:local exon 88952 89176 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 82073 89176 446 + . alignment_id 0 ; Query GL50803_3378-t26_1-p1 ; Align 82073 20 168 ; Align 87748 76 129 ; Align 88952 119 225 utg18_pilon exonerate:protein2genome:local gene 131384 178532 1984 - . gene_id 0 ; sequence GL50803_33783-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 176895 178532 . - . utg18_pilon exonerate:protein2genome:local exon 176895 178532 . - . insertions 15 ; deletions 3 utg18_pilon exonerate:protein2genome:local splice5 176893 176894 . - . intron_id 1 ; splice_site "CT" utg18_pilon exonerate:protein2genome:local intron 131531 176894 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 131531 131532 . - . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 131384 131530 . - . utg18_pilon exonerate:protein2genome:local exon 131384 131530 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 131384 178532 1984 - . alignment_id 0 ; Query GL50803_33783-t26_1-p1 ; Align 178533 1 261 ; Align 178269 88 186 ; Align 178080 150 258 ; Align 177822 237 51 ; Align 177771 256 549 ; Align 177219 439 9 ; Align 177204 442 309 ; Align 131531 545 147 utg308_pilon exonerate:protein2genome:local gene 359344 360960 2412 - . gene_id 0 ; sequence GL50803_33787-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 359344 360960 . - . utg308_pilon exonerate:protein2genome:local exon 359344 360960 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 359344 360960 2412 - . alignment_id 0 ; Query GL50803_33787-t26_1-p1 ; Align 360961 1 1617 utg47_pilon exonerate:protein2genome:local gene 942677 944548 2316 - . gene_id 0 ; sequence GL50803_33807-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 942677 944548 . - . utg47_pilon exonerate:protein2genome:local exon 942677 944548 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 942677 944548 2316 - . alignment_id 0 ; Query GL50803_33807-t26_1-p1 ; Align 944549 16 1872 utg47_pilon exonerate:protein2genome:local gene 931185 931901 857 + . gene_id 0 ; sequence GL50803_33809-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 931185 931901 . + . utg47_pilon exonerate:protein2genome:local exon 931185 931901 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 931185 931901 857 + . alignment_id 0 ; Query GL50803_33809-t26_1-p1 ; Align 931185 1 69 ; Align 931254 26 648 utg731_pilon exonerate:protein2genome:local gene 169546 169821 206 + . gene_id 0 ; sequence GL50803_33831-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 169546 169821 . + . utg731_pilon exonerate:protein2genome:local exon 169546 169821 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 169546 169821 206 + . alignment_id 0 ; Query GL50803_33831-t26_1-p1 ; Align 169546 2 276 utg731_pilon exonerate:protein2genome:local gene 197418 197723 282 + . gene_id 0 ; sequence GL50803_33833-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 197418 197723 . + . utg731_pilon exonerate:protein2genome:local exon 197418 197723 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 197418 197723 282 + . alignment_id 0 ; Query GL50803_33833-t26_1-p1 ; Align 197418 1 306 utg265_pilon exonerate:protein2genome:local gene 860095 860442 544 + . gene_id 0 ; sequence GL50803_33862-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 860095 860442 . + . utg265_pilon exonerate:protein2genome:local exon 860095 860442 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 860095 860442 544 + . alignment_id 0 ; Query GL50803_33862-t26_1-p1 ; Align 860095 10 348 utg265_pilon exonerate:protein2genome:local gene 844495 845844 1310 - . gene_id 0 ; sequence GL50803_33863-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 844495 845844 . - . utg265_pilon exonerate:protein2genome:local exon 844495 845844 . - . insertions 3 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 844495 845844 1310 - . alignment_id 0 ; Query GL50803_33863-t26_1-p1 ; Align 845845 1 171 ; Align 845671 58 123 ; Align 845548 102 1053 utg47_pilon exonerate:protein2genome:local gene 2294712 2296772 2986 - . gene_id 0 ; sequence GL50803_33866-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2294712 2296772 . - . utg47_pilon exonerate:protein2genome:local exon 2294712 2296772 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2294712 2296772 2986 - . alignment_id 0 ; Query GL50803_33866-t26_1-p1 ; Align 2296773 1 2061 utg47_pilon exonerate:protein2genome:local gene 2273681 2274067 596 + . gene_id 0 ; sequence GL50803_33870-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2273681 2274067 . + . utg47_pilon exonerate:protein2genome:local exon 2273681 2274067 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2273681 2274067 596 + . alignment_id 0 ; Query GL50803_33870-t26_1-p1 ; Align 2273681 1 387 utg47_pilon exonerate:protein2genome:local gene 853500 853757 236 + . gene_id 0 ; sequence GL50803_33892-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 853500 853757 . + . utg47_pilon exonerate:protein2genome:local exon 853500 853757 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 853500 853757 236 + . alignment_id 0 ; Query GL50803_33892-t26_1-p1 ; Align 853500 1 258 utg47_pilon exonerate:protein2genome:local gene 1739044 1740300 1488 + . gene_id 0 ; sequence GL50803_33898-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1739044 1740300 . + . utg47_pilon exonerate:protein2genome:local exon 1739044 1740300 . + . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 1739044 1740300 1488 + . alignment_id 0 ; Query GL50803_33898-t26_1-p1 ; Align 1739044 1 1179 ; Align 1740223 398 78 utg64_pilon exonerate:protein2genome:local gene 602828 602950 156 - . gene_id 0 ; sequence GL50803_33931-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 602828 602950 . - . utg64_pilon exonerate:protein2genome:local exon 602828 602950 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 602828 602950 156 - . alignment_id 0 ; Query GL50803_33931-t26_1-p1 ; Align 602951 1 123 utg64_pilon exonerate:protein2genome:local gene 591507 595517 5274 - . gene_id 0 ; sequence GL50803_33932-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 591507 595517 . - . utg64_pilon exonerate:protein2genome:local exon 591507 595517 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 591507 595517 5274 - . alignment_id 0 ; Query GL50803_33932-t26_1-p1 ; Align 595518 1 2322 ; Align 593196 776 1689 utg47_pilon exonerate:protein2genome:local gene 515585 515716 164 + . gene_id 0 ; sequence GL50803_33935-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 515585 515716 . + . utg47_pilon exonerate:protein2genome:local exon 515585 515716 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 515585 515716 164 + . alignment_id 0 ; Query GL50803_33935-t26_1-p1 ; Align 515585 1 132 utg47_pilon exonerate:protein2genome:local gene 339540 339767 250 + . gene_id 0 ; sequence GL50803_33956-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 339540 339767 . + . utg47_pilon exonerate:protein2genome:local exon 339540 339767 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 339540 339767 250 + . alignment_id 0 ; Query GL50803_33956-t26_1-p1 ; Align 339540 1 228 utg47_pilon exonerate:protein2genome:local gene 338779 338898 130 - . gene_id 0 ; sequence GL50803_33957-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 338779 338898 . - . utg47_pilon exonerate:protein2genome:local exon 338779 338898 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 338779 338898 130 - . alignment_id 0 ; Query GL50803_33957-t26_1-p1 ; Align 338899 1 120 utg99_pilon exonerate:protein2genome:local gene 244228 244359 125 + . gene_id 0 ; sequence GL50803_33960-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 244228 244359 . + . utg99_pilon exonerate:protein2genome:local exon 244228 244359 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 244228 244359 125 + . alignment_id 0 ; Query GL50803_33960-t26_1-p1 ; Align 244228 24 132 utg11_pilon exonerate:protein2genome:local gene 1166300 1166608 404 - . gene_id 0 ; sequence GL50803_33978-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1166300 1166608 . - . utg11_pilon exonerate:protein2genome:local exon 1166300 1166608 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1166300 1166608 404 - . alignment_id 0 ; Query GL50803_33978-t26_1-p1 ; Align 1166609 6 309 utg731_pilon exonerate:protein2genome:local gene 599840 601639 2200 + . gene_id 0 ; sequence GL50803_33985-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 599840 601639 . + . utg731_pilon exonerate:protein2genome:local exon 599840 601639 . + . insertions 3 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 599840 601639 2200 + . alignment_id 0 ; Query GL50803_33985-t26_1-p1 ; Align 599840 295 1488 ; Align 601331 791 192 ; Align 601523 856 18 ; Align 601541 865 99 utg731_pilon exonerate:protein2genome:local gene 532731 533657 1375 + . gene_id 0 ; sequence GL50803_33989-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 532731 533657 . + . utg731_pilon exonerate:protein2genome:local exon 532731 533657 . + . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 532731 533657 1375 + . alignment_id 0 ; Query GL50803_33989-t26_1-p1 ; Align 532731 1 762 ; Align 533493 258 165 utg731_pilon exonerate:protein2genome:local gene 451912 456498 5239 - . gene_id 0 ; sequence GL50803_34023-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 451912 456498 . - . utg731_pilon exonerate:protein2genome:local exon 451912 456498 . - . insertions 15 ; deletions 9 utg731_pilon exonerate:protein2genome:local similarity 451912 456498 5239 - . alignment_id 0 ; Query GL50803_34023-t26_1-p1 ; Align 456499 1 843 ; Align 455653 282 132 ; Align 455515 326 75 ; Align 455434 351 1104 ; Align 454330 720 219 ; Align 454111 794 1242 ; Align 452869 1212 87 ; Align 452782 1244 870 utg731_pilon exonerate:protein2genome:local gene 373083 374498 1327 - . gene_id 0 ; sequence GL50803_34050-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 373083 374498 . - . utg731_pilon exonerate:protein2genome:local exon 373083 374498 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 373083 374498 1327 - . alignment_id 0 ; Query GL50803_34050-t26_1-p1 ; Align 374499 1 1188 ; Align 373311 399 228 utg731_pilon exonerate:protein2genome:local gene 353472 353600 178 + . gene_id 0 ; sequence GL50803_34054-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 353472 353600 . + . utg731_pilon exonerate:protein2genome:local exon 353472 353600 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 353472 353600 178 + . alignment_id 0 ; Query GL50803_34054-t26_1-p1 ; Align 353472 1 129 utg47_pilon exonerate:protein2genome:local gene 1059822 1063058 4387 + . gene_id 0 ; sequence GL50803_34058-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1059822 1063058 . + . utg47_pilon exonerate:protein2genome:local exon 1059822 1063058 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1059822 1063058 4387 + . alignment_id 0 ; Query GL50803_34058-t26_1-p1 ; Align 1059822 25 210 ; Align 1060032 97 3027 utg731_pilon exonerate:protein2genome:local gene 642741 642857 153 - . gene_id 0 ; sequence GL50803_34068-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 642741 642857 . - . utg731_pilon exonerate:protein2genome:local exon 642741 642857 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 642741 642857 153 - . alignment_id 0 ; Query GL50803_34068-t26_1-p1 ; Align 642858 1 117 utg731_pilon exonerate:protein2genome:local gene 647171 647293 102 - . gene_id 0 ; sequence GL50803_34069-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 647171 647293 . - . utg731_pilon exonerate:protein2genome:local exon 647171 647293 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 647171 647293 102 - . alignment_id 0 ; Query GL50803_34069-t26_1-p1 ; Align 647294 2 123 utg11_pilon exonerate:protein2genome:local gene 996041 996274 366 + . gene_id 0 ; sequence GL50803_34074-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 996041 996274 . + . utg11_pilon exonerate:protein2genome:local exon 996041 996274 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 996041 996274 366 + . alignment_id 0 ; Query GL50803_34074-t26_1-p1 ; Align 996041 1 234 utg47_pilon exonerate:protein2genome:local gene 2055331 2056483 1773 - . gene_id 0 ; sequence GL50803_3408-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2055331 2056483 . - . utg47_pilon exonerate:protein2genome:local exon 2055331 2056483 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 2055331 2056483 1773 - . alignment_id 0 ; Query GL50803_3408-t26_1-p1 ; Align 2056484 1 39 ; Align 2056444 14 1113 utg47_pilon exonerate:protein2genome:local gene 2052457 2055150 4357 - . gene_id 0 ; sequence GL50803_3409-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2052457 2055150 . - . utg47_pilon exonerate:protein2genome:local exon 2052457 2055150 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2052457 2055150 4357 - . alignment_id 0 ; Query GL50803_3409-t26_1-p1 ; Align 2055151 1 2694 utg11_pilon exonerate:protein2genome:local gene 1259047 1259277 362 - . gene_id 0 ; sequence GL50803_34093-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1259047 1259277 . - . utg11_pilon exonerate:protein2genome:local exon 1259047 1259277 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1259047 1259277 362 - . alignment_id 0 ; Query GL50803_34093-t26_1-p1 ; Align 1259278 1 231 utg11_pilon exonerate:protein2genome:local gene 1259333 1259833 793 - . gene_id 0 ; sequence GL50803_34094-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1259333 1259833 . - . utg11_pilon exonerate:protein2genome:local exon 1259333 1259833 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1259333 1259833 793 - . alignment_id 0 ; Query GL50803_34094-t26_1-p1 ; Align 1259834 1 501 utg99_pilon exonerate:protein2genome:local gene 530454 533348 3549 - . gene_id 0 ; sequence GL50803_34126-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 530454 533348 . - . utg99_pilon exonerate:protein2genome:local exon 530454 533348 . - . insertions 6 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 530454 533348 3549 - . alignment_id 0 ; Query GL50803_34126-t26_1-p1 ; Align 533349 1 294 ; Align 533049 99 1407 ; Align 531642 569 1188 utg349_pilon exonerate:protein2genome:local gene 1073080 1073616 749 - . gene_id 0 ; sequence GL50803_34134-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1073080 1073616 . - . utg349_pilon exonerate:protein2genome:local exon 1073080 1073616 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1073080 1073616 749 - . alignment_id 0 ; Query GL50803_34134-t26_1-p1 ; Align 1073617 174 537 utg731_pilon exonerate:protein2genome:local gene 929103 930166 1617 - . gene_id 0 ; sequence GL50803_3414-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 929103 930166 . - . utg731_pilon exonerate:protein2genome:local exon 929103 930166 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 929103 930166 1617 - . alignment_id 0 ; Query GL50803_3414-t26_1-p1 ; Align 930167 1 300 ; Align 929866 101 267 ; Align 929598 190 495 utg11_pilon exonerate:protein2genome:local gene 1379368 1380174 1105 - . gene_id 0 ; sequence GL50803_34141-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1379368 1380174 . - . utg11_pilon exonerate:protein2genome:local exon 1379368 1380174 . - . insertions 6 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1379368 1380174 1105 - . alignment_id 0 ; Query GL50803_34141-t26_1-p1 ; Align 1380175 194 180 ; Align 1379989 254 477 ; Align 1379512 414 144 utg265_pilon exonerate:protein2genome:local gene 312381 312677 283 - . gene_id 0 ; sequence GL50803_34150-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 312381 312677 . - . utg265_pilon exonerate:protein2genome:local exon 312381 312677 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 312381 312677 283 - . alignment_id 0 ; Query GL50803_34150-t26_1-p1 ; Align 312678 2 297 utg1966_pilon exonerate:protein2genome:local gene 67079 68104 1677 + . gene_id 0 ; sequence GL50803_34151-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 67079 68104 . + . utg1966_pilon exonerate:protein2genome:local exon 67079 68104 . + . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 67079 68104 1677 + . alignment_id 0 ; Query GL50803_34151-t26_1-p1 ; Align 67079 1 1026 utg1966_pilon exonerate:protein2genome:local gene 73286 73432 131 + . gene_id 0 ; sequence GL50803_34153-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 73286 73432 . + . utg1966_pilon exonerate:protein2genome:local exon 73286 73432 . + . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 73286 73432 131 + . alignment_id 0 ; Query GL50803_34153-t26_1-p1 ; Align 73286 179 147 utg1966_pilon exonerate:protein2genome:local gene 154338 154484 131 - . gene_id 0 ; sequence GL50803_34153-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 154338 154484 . - . utg1966_pilon exonerate:protein2genome:local exon 154338 154484 . - . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 154338 154484 131 - . alignment_id 0 ; Query GL50803_34153-t26_1-p1 ; Align 154485 179 147 utg18_pilon exonerate:protein2genome:local gene 50841 51698 1248 - . gene_id 0 ; sequence GL50803_34160-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 50841 51698 . - . utg18_pilon exonerate:protein2genome:local exon 50841 51698 . - . insertions 0 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 50841 51698 1248 - . alignment_id 0 ; Query GL50803_34160-t26_1-p1 ; Align 51699 1 489 ; Align 51210 165 369 utg11_pilon exonerate:protein2genome:local gene 541620 542307 1164 - . gene_id 0 ; sequence GL50803_3417-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 541620 542307 . - . utg11_pilon exonerate:protein2genome:local exon 541620 542307 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 541620 542307 1164 - . alignment_id 0 ; Query GL50803_3417-t26_1-p1 ; Align 542308 1 186 ; Align 542121 63 501 utg64_pilon exonerate:protein2genome:local gene 736074 736202 142 + . gene_id 0 ; sequence GL50803_34172-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 736074 736202 . + . utg64_pilon exonerate:protein2genome:local exon 736074 736202 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 736074 736202 142 + . alignment_id 0 ; Query GL50803_34172-t26_1-p1 ; Align 736074 1 129 utg11_pilon exonerate:protein2genome:local gene 1058185 1062468 6014 + . gene_id 0 ; sequence GL50803_34179-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1058185 1062468 . + . utg11_pilon exonerate:protein2genome:local exon 1058185 1062468 . + . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 1058185 1062468 6014 + . alignment_id 0 ; Query GL50803_34179-t26_1-p1 ; Align 1058185 1 555 ; Align 1058740 188 3123 ; Align 1061863 1230 606 utg11_pilon exonerate:protein2genome:local gene 540396 540914 820 - . gene_id 0 ; sequence GL50803_3419-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 540396 540914 . - . utg11_pilon exonerate:protein2genome:local exon 540396 540914 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 540396 540914 820 - . alignment_id 0 ; Query GL50803_3419-t26_1-p1 ; Align 540915 1 519 utg64_pilon exonerate:protein2genome:local gene 154070 479431 1362 + . gene_id 0 ; sequence GL50803_34196-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 154070 154392 . + . utg64_pilon exonerate:protein2genome:local exon 154070 154392 . + . insertions 3 ; deletions 1 ; frameshifts 4 utg64_pilon exonerate:protein2genome:local splice5 154393 154394 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 154393 280485 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 280484 280485 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 280486 281355 . + . utg64_pilon exonerate:protein2genome:local exon 280486 281355 . + . insertions 3 ; deletions 3 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local splice5 281356 281357 . + . intron_id 2 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 281356 479289 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 479288 479289 . + . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 479290 479431 . + . utg64_pilon exonerate:protein2genome:local exon 479290 479431 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 154070 479431 1362 + . alignment_id 0 ; Query GL50803_34196-t26_1-p1 ; Align 154070 2 75 ; Align 154148 27 42 ; Align 154194 41 141 ; Align 154335 89 57 ; Align 280488 109 99 ; Align 280590 142 42 ; Align 280632 157 93 ; Align 280725 190 309 ; Align 281036 293 318 ; Align 479291 400 141 utg11_pilon exonerate:protein2genome:local gene 538990 540306 2031 - . gene_id 0 ; sequence GL50803_3420-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 538990 540306 . - . utg11_pilon exonerate:protein2genome:local exon 538990 540306 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 538990 540306 2031 - . alignment_id 0 ; Query GL50803_3420-t26_1-p1 ; Align 540307 1 1317 utg11_pilon exonerate:protein2genome:local gene 537875 538999 1559 + . gene_id 0 ; sequence GL50803_3421-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 537875 538999 . + . utg11_pilon exonerate:protein2genome:local exon 537875 538999 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 537875 538999 1559 + . alignment_id 0 ; Query GL50803_3421-t26_1-p1 ; Align 537875 1 1125 utg212_pilon exonerate:protein2genome:local gene 434039 434261 300 - . gene_id 0 ; sequence GL50803_34226-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 434039 434261 . - . utg212_pilon exonerate:protein2genome:local exon 434039 434261 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 434039 434261 300 - . alignment_id 0 ; Query GL50803_34226-t26_1-p1 ; Align 434262 1 75 ; Align 434186 26 147 utg349_pilon exonerate:protein2genome:local gene 1334468 1334695 194 - . gene_id 0 ; sequence GL50803_34259-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1334468 1334695 . - . utg349_pilon exonerate:protein2genome:local exon 1334468 1334695 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1334468 1334695 194 - . alignment_id 0 ; Query GL50803_34259-t26_1-p1 ; Align 1334696 1 228 utg11_pilon exonerate:protein2genome:local gene 752086 752340 172 - . gene_id 0 ; sequence GL50803_34307-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 752086 752340 . - . utg11_pilon exonerate:protein2genome:local exon 752086 752340 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 752086 752340 172 - . alignment_id 0 ; Query GL50803_34307-t26_1-p1 ; Align 752341 1 255 utg349_pilon exonerate:protein2genome:local gene 238964 239110 173 + . gene_id 0 ; sequence GL50803_34330-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 238964 239110 . + . utg349_pilon exonerate:protein2genome:local exon 238964 239110 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 238964 239110 173 + . alignment_id 0 ; Query GL50803_34330-t26_1-p1 ; Align 238964 1 147 utg64_pilon exonerate:protein2genome:local gene 71860 72039 137 + . gene_id 0 ; sequence GL50803_34334-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 71860 72039 . + . utg64_pilon exonerate:protein2genome:local exon 71860 72039 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 71860 72039 137 + . alignment_id 0 ; Query GL50803_34334-t26_1-p1 ; Align 71860 19 180 utg64_pilon exonerate:protein2genome:local gene 75802 75981 137 - . gene_id 0 ; sequence GL50803_34334-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 75802 75981 . - . utg64_pilon exonerate:protein2genome:local exon 75802 75981 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 75802 75981 137 - . alignment_id 0 ; Query GL50803_34334-t26_1-p1 ; Align 75982 19 180 utg349_pilon exonerate:protein2genome:local gene 240586 240711 106 + . gene_id 0 ; sequence GL50803_34340-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 240586 240711 . + . utg349_pilon exonerate:protein2genome:local exon 240586 240711 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 240586 240711 106 + . alignment_id 0 ; Query GL50803_34340-t26_1-p1 ; Align 240586 1 126 utg349_pilon exonerate:protein2genome:local gene 232211 232576 308 + . gene_id 0 ; sequence GL50803_34344-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 232211 232576 . + . utg349_pilon exonerate:protein2genome:local exon 232211 232576 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 232211 232576 308 + . alignment_id 0 ; Query GL50803_34344-t26_1-p1 ; Align 232211 1 366 utg349_pilon exonerate:protein2genome:local gene 234391 234528 149 + . gene_id 0 ; sequence GL50803_34346-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 234391 234528 . + . utg349_pilon exonerate:protein2genome:local exon 234391 234528 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 234391 234528 149 + . alignment_id 0 ; Query GL50803_34346-t26_1-p1 ; Align 234391 1 138 utg11_pilon exonerate:protein2genome:local gene 909334 1543473 2142 - . gene_id 0 ; sequence GL50803_34357-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1543203 1543473 . - . utg11_pilon exonerate:protein2genome:local exon 1543203 1543473 . - . insertions 12 ; deletions 3 utg11_pilon exonerate:protein2genome:local splice5 1543201 1543202 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1453059 1543202 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1453059 1453060 . - . intron_id 0 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local cds 1452224 1453058 . - . utg11_pilon exonerate:protein2genome:local exon 1452224 1453058 . - . insertions 12 ; deletions 0 ; frameshifts 5 utg11_pilon exonerate:protein2genome:local splice5 1452222 1452223 . - . intron_id 2 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 1342477 1452223 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 1342477 1342478 . - . intron_id 1 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1342293 1342476 . - . utg11_pilon exonerate:protein2genome:local exon 1342293 1342476 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1342291 1342292 . - . intron_id 3 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1179900 1342292 . - . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 1179900 1179901 . - . intron_id 2 ; splice_site "TG" utg11_pilon exonerate:protein2genome:local cds 1179774 1179899 . - . utg11_pilon exonerate:protein2genome:local exon 1179774 1179899 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1179772 1179773 . - . intron_id 4 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1064719 1179773 . - . intron_id 4 utg11_pilon exonerate:protein2genome:local splice3 1064719 1064720 . - . intron_id 3 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1064501 1064718 . - . utg11_pilon exonerate:protein2genome:local exon 1064501 1064718 . - . insertions 6 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1064499 1064500 . - . intron_id 5 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1063447 1064500 . - . intron_id 5 utg11_pilon exonerate:protein2genome:local splice3 1063447 1063448 . - . intron_id 4 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1063354 1063446 . - . utg11_pilon exonerate:protein2genome:local exon 1063354 1063446 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1063352 1063353 . - . intron_id 6 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local intron 939903 1063353 . - . intron_id 6 utg11_pilon exonerate:protein2genome:local splice3 939903 939904 . - . intron_id 5 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 939117 939902 . - . utg11_pilon exonerate:protein2genome:local exon 939117 939902 . - . insertions 0 ; deletions 5 utg11_pilon exonerate:protein2genome:local splice5 939115 939116 . - . intron_id 7 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 909478 939116 . - . intron_id 7 utg11_pilon exonerate:protein2genome:local splice3 909478 909479 . - . intron_id 6 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 909334 909477 . - . utg11_pilon exonerate:protein2genome:local exon 909334 909477 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 909334 1543473 2142 - . alignment_id 0 ; Query GL50803_34357-t26_1-p1 ; Align 1543474 6 78 ; Align 1543387 32 57 ; Align 1543330 52 15 ; Align 1543315 59 54 ; Align 1543258 77 54 ; Align 1453057 96 198 ; Align 1452856 162 27 ; Align 1452826 171 102 ; Align 1452716 205 243 ; Align 1452470 286 246 ; Align 1342477 368 108 ; Align 1342366 404 72 ; Align 1179898 429 120 ; Align 1179778 470 3 ; Align 1064717 472 27 ; Align 1064684 481 87 ; Align 1064597 511 96 ; Align 1063447 543 36 ; Align 1063408 555 54 ; Align 939903 573 141 ; Align 939762 621 165 ; Align 939597 678 291 ; Align 939306 777 189 ; Align 909478 840 144 utg18_pilon exonerate:protein2genome:local gene 536744 536947 144 - . gene_id 0 ; sequence GL50803_34374-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 536744 536947 . - . utg18_pilon exonerate:protein2genome:local exon 536744 536947 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 536744 536947 144 - . alignment_id 0 ; Query GL50803_34374-t26_1-p1 ; Align 536948 1 204 utg18_pilon exonerate:protein2genome:local gene 531682 531873 189 - . gene_id 0 ; sequence GL50803_34375-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 531682 531873 . - . utg18_pilon exonerate:protein2genome:local exon 531682 531873 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 531682 531873 189 - . alignment_id 0 ; Query GL50803_34375-t26_1-p1 ; Align 531874 1 192 utg18_pilon exonerate:protein2genome:local gene 525281 525382 111 - . gene_id 0 ; sequence GL50803_34381-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 525281 525382 . - . utg18_pilon exonerate:protein2genome:local exon 525281 525382 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 525281 525382 111 - . alignment_id 0 ; Query GL50803_34381-t26_1-p1 ; Align 525383 1 102 utg18_pilon exonerate:protein2genome:local gene 519344 519520 178 - . gene_id 0 ; sequence GL50803_34384-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 519344 519520 . - . utg18_pilon exonerate:protein2genome:local exon 519344 519520 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 519344 519520 178 - . alignment_id 0 ; Query GL50803_34384-t26_1-p1 ; Align 519521 3 177 utg349_pilon exonerate:protein2genome:local gene 1237567 1237854 215 - . gene_id 0 ; sequence GL50803_34398-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1237567 1237854 . - . utg349_pilon exonerate:protein2genome:local exon 1237567 1237854 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1237567 1237854 215 - . alignment_id 0 ; Query GL50803_34398-t26_1-p1 ; Align 1237855 10 111 ; Align 1237741 47 174 utg18_pilon exonerate:protein2genome:local gene 533886 534167 212 - . gene_id 0 ; sequence GL50803_34401-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 533886 534167 . - . utg18_pilon exonerate:protein2genome:local exon 533886 534167 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 533886 534167 212 - . alignment_id 0 ; Query GL50803_34401-t26_1-p1 ; Align 534168 1 282 utg18_pilon exonerate:protein2genome:local gene 532426 532623 168 - . gene_id 0 ; sequence GL50803_34403-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 532426 532623 . - . utg18_pilon exonerate:protein2genome:local exon 532426 532623 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 532426 532623 168 - . alignment_id 0 ; Query GL50803_34403-t26_1-p1 ; Align 532624 1 198 utg18_pilon exonerate:protein2genome:local gene 526601 526765 150 - . gene_id 0 ; sequence GL50803_34406-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 526601 526765 . - . utg18_pilon exonerate:protein2genome:local exon 526601 526765 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 526601 526765 150 - . alignment_id 0 ; Query GL50803_34406-t26_1-p1 ; Align 526766 1 165 utg47_pilon exonerate:protein2genome:local gene 1840133 1840243 123 - . gene_id 0 ; sequence GL50803_34410-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1840133 1840243 . - . utg47_pilon exonerate:protein2genome:local exon 1840133 1840243 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1840133 1840243 123 - . alignment_id 0 ; Query GL50803_34410-t26_1-p1 ; Align 1840244 1 111 utg18_pilon exonerate:protein2genome:local gene 482571 482735 193 - . gene_id 0 ; sequence GL50803_34418-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 482571 482735 . - . utg18_pilon exonerate:protein2genome:local exon 482571 482735 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 482571 482735 193 - . alignment_id 0 ; Query GL50803_34418-t26_1-p1 ; Align 482736 1 165 utg731_pilon exonerate:protein2genome:local gene 299733 300053 283 + . gene_id 0 ; sequence GL50803_34436-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 299733 300053 . + . utg731_pilon exonerate:protein2genome:local exon 299733 300053 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 299733 300053 283 + . alignment_id 0 ; Query GL50803_34436-t26_1-p1 ; Align 299733 3 321 utg47_pilon exonerate:protein2genome:local gene 395250 395516 347 - . gene_id 0 ; sequence GL50803_34442-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 395250 395516 . - . utg47_pilon exonerate:protein2genome:local exon 395250 395516 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 395250 395516 347 - . alignment_id 0 ; Query GL50803_34442-t26_1-p1 ; Align 395517 1 123 ; Align 395394 44 144 utg731_pilon exonerate:protein2genome:local gene 118203 118307 109 - . gene_id 0 ; sequence GL50803_34450-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 118203 118307 . - . utg731_pilon exonerate:protein2genome:local exon 118203 118307 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 118203 118307 109 - . alignment_id 0 ; Query GL50803_34450-t26_1-p1 ; Align 118308 2 105 utg731_pilon exonerate:protein2genome:local gene 126617 126724 103 - . gene_id 0 ; sequence GL50803_34466-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 126617 126724 . - . utg731_pilon exonerate:protein2genome:local exon 126617 126724 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 126617 126724 103 - . alignment_id 0 ; Query GL50803_34466-t26_1-p1 ; Align 126725 1 108 utg731_pilon exonerate:protein2genome:local gene 125297 125461 169 - . gene_id 0 ; sequence GL50803_34467-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 125297 125461 . - . utg731_pilon exonerate:protein2genome:local exon 125297 125461 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 125297 125461 169 - . alignment_id 0 ; Query GL50803_34467-t26_1-p1 ; Align 125462 1 165 utg18_pilon exonerate:protein2genome:local gene 128838 222256 3015 + . gene_id 0 ; sequence GL50803_3449-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 128838 129211 . + . utg18_pilon exonerate:protein2genome:local exon 128838 129211 . + . insertions 3 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 129212 129213 . + . intron_id 1 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local intron 129212 220125 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 220124 220125 . + . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 220126 222256 . + . utg18_pilon exonerate:protein2genome:local exon 220126 222256 . + . insertions 6 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 128838 222256 3015 + . alignment_id 0 ; Query GL50803_3449-t26_1-p1 ; Align 128838 28 105 ; Align 128946 63 264 ; Align 220127 152 201 ; Align 220334 219 1923 utg11_pilon exonerate:protein2genome:local gene 73512 73661 126 + . gene_id 0 ; sequence GL50803_34505-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 73512 73661 . + . utg11_pilon exonerate:protein2genome:local exon 73512 73661 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 73512 73661 126 + . alignment_id 0 ; Query GL50803_34505-t26_1-p1 ; Align 73512 1 150 utg11_pilon exonerate:protein2genome:local gene 49484 49846 269 + . gene_id 0 ; sequence GL50803_34518-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 49484 49846 . + . utg11_pilon exonerate:protein2genome:local exon 49484 49846 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 49484 49846 269 + . alignment_id 0 ; Query GL50803_34518-t26_1-p1 ; Align 49484 1 363 utg47_pilon exonerate:protein2genome:local gene 575384 575482 132 - . gene_id 0 ; sequence GL50803_34526-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 575384 575482 . - . utg47_pilon exonerate:protein2genome:local exon 575384 575482 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 575384 575482 132 - . alignment_id 0 ; Query GL50803_34526-t26_1-p1 ; Align 575483 1 99 utg731_pilon exonerate:protein2genome:local gene 456792 459950 3778 - . gene_id 0 ; sequence GL50803_3455-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 456792 459950 . - . utg731_pilon exonerate:protein2genome:local exon 456792 459950 . - . insertions 0 ; deletions 14 utg731_pilon exonerate:protein2genome:local similarity 456792 459950 3778 - . alignment_id 0 ; Query GL50803_3455-t26_1-p1 ; Align 459951 1 540 ; Align 459411 182 1053 ; Align 458358 536 300 ; Align 458058 640 432 ; Align 457626 787 96 ; Align 457530 820 228 ; Align 457302 898 510 utg349_pilon exonerate:protein2genome:local gene 675662 675778 192 - . gene_id 0 ; sequence GL50803_34559-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 675662 675778 . - . utg349_pilon exonerate:protein2genome:local exon 675662 675778 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 675662 675778 192 - . alignment_id 0 ; Query GL50803_34559-t26_1-p1 ; Align 675779 1 117 utg349_pilon exonerate:protein2genome:local gene 754100 754264 146 - . gene_id 0 ; sequence GL50803_34569-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 754100 754264 . - . utg349_pilon exonerate:protein2genome:local exon 754100 754264 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 754100 754264 146 - . alignment_id 0 ; Query GL50803_34569-t26_1-p1 ; Align 754265 4 165 utg349_pilon exonerate:protein2genome:local gene 779130 779324 174 - . gene_id 0 ; sequence GL50803_34578-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 779130 779324 . - . utg349_pilon exonerate:protein2genome:local exon 779130 779324 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 779130 779324 174 - . alignment_id 0 ; Query GL50803_34578-t26_1-p1 ; Align 779325 1 195 utg349_pilon exonerate:protein2genome:local gene 725791 725883 117 - . gene_id 0 ; sequence GL50803_34579-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 725791 725883 . - . utg349_pilon exonerate:protein2genome:local exon 725791 725883 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 725791 725883 117 - . alignment_id 0 ; Query GL50803_34579-t26_1-p1 ; Align 725884 1 93 utg349_pilon exonerate:protein2genome:local gene 715245 715352 104 - . gene_id 0 ; sequence GL50803_34580-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 715245 715352 . - . utg349_pilon exonerate:protein2genome:local exon 715245 715352 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 715245 715352 104 - . alignment_id 0 ; Query GL50803_34580-t26_1-p1 ; Align 715353 1 108 utg349_pilon exonerate:protein2genome:local gene 712377 712502 197 - . gene_id 0 ; sequence GL50803_34581-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 712377 712502 . - . utg349_pilon exonerate:protein2genome:local exon 712377 712502 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 712377 712502 197 - . alignment_id 0 ; Query GL50803_34581-t26_1-p1 ; Align 712503 1 126 utg349_pilon exonerate:protein2genome:local gene 681560 682000 296 - . gene_id 0 ; sequence GL50803_34591-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 681560 682000 . - . utg349_pilon exonerate:protein2genome:local exon 681560 682000 . - . insertions 12 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 681560 682000 296 - . alignment_id 0 ; Query GL50803_34591-t26_1-p1 ; Align 682001 1 147 ; Align 681842 50 282 utg349_pilon exonerate:protein2genome:local gene 769124 769234 113 - . gene_id 0 ; sequence GL50803_34598-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 769124 769234 . - . utg349_pilon exonerate:protein2genome:local exon 769124 769234 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 769124 769234 113 - . alignment_id 0 ; Query GL50803_34598-t26_1-p1 ; Align 769235 1 111 utg308_pilon exonerate:protein2genome:local gene 19970 20068 113 - . gene_id 0 ; sequence GL50803_34625-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 19970 20068 . - . utg308_pilon exonerate:protein2genome:local exon 19970 20068 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 19970 20068 113 - . alignment_id 0 ; Query GL50803_34625-t26_1-p1 ; Align 20069 1 99 utg308_pilon exonerate:protein2genome:local gene 9654 9767 128 - . gene_id 0 ; sequence GL50803_34626-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 9654 9767 . - . utg308_pilon exonerate:protein2genome:local exon 9654 9767 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 9654 9767 128 - . alignment_id 0 ; Query GL50803_34626-t26_1-p1 ; Align 9768 1 114 utg308_pilon exonerate:protein2genome:local gene 25124 25231 117 - . gene_id 0 ; sequence GL50803_34629-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 25124 25231 . - . utg308_pilon exonerate:protein2genome:local exon 25124 25231 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 25124 25231 117 - . alignment_id 0 ; Query GL50803_34629-t26_1-p1 ; Align 25232 1 108 utg47_pilon exonerate:protein2genome:local gene 352347 352517 114 + . gene_id 0 ; sequence GL50803_34632-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 352347 352517 . + . utg47_pilon exonerate:protein2genome:local exon 352347 352517 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 352347 352517 114 + . alignment_id 0 ; Query GL50803_34632-t26_1-p1 ; Align 352347 1 171 utg47_pilon exonerate:protein2genome:local gene 347878 348000 150 + . gene_id 0 ; sequence GL50803_34645-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 347878 348000 . + . utg47_pilon exonerate:protein2genome:local exon 347878 348000 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 347878 348000 150 + . alignment_id 0 ; Query GL50803_34645-t26_1-p1 ; Align 347878 1 123 utg47_pilon exonerate:protein2genome:local gene 355618 355920 251 + . gene_id 0 ; sequence GL50803_34648-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 355618 355920 . + . utg47_pilon exonerate:protein2genome:local exon 355618 355920 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 355618 355920 251 + . alignment_id 0 ; Query GL50803_34648-t26_1-p1 ; Align 355618 1 303 utg64_pilon exonerate:protein2genome:local gene 556203 556412 198 - . gene_id 0 ; sequence GL50803_34649-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 556203 556412 . - . utg64_pilon exonerate:protein2genome:local exon 556203 556412 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 556203 556412 198 - . alignment_id 0 ; Query GL50803_34649-t26_1-p1 ; Align 556413 1 210 utg11_pilon exonerate:protein2genome:local gene 735703 736776 1553 + . gene_id 0 ; sequence GL50803_3465-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 735703 736776 . + . utg11_pilon exonerate:protein2genome:local exon 735703 736776 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 735703 736776 1553 + . alignment_id 0 ; Query GL50803_3465-t26_1-p1 ; Align 735703 1 1074 utg47_pilon exonerate:protein2genome:local gene 371353 371553 181 + . gene_id 0 ; sequence GL50803_34650-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 371353 371553 . + . utg47_pilon exonerate:protein2genome:local exon 371353 371553 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 371353 371553 181 + . alignment_id 0 ; Query GL50803_34650-t26_1-p1 ; Align 371353 1 201 utg47_pilon exonerate:protein2genome:local gene 380990 381202 226 + . gene_id 0 ; sequence GL50803_34651-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 380990 381202 . + . utg47_pilon exonerate:protein2genome:local exon 380990 381202 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 380990 381202 226 + . alignment_id 0 ; Query GL50803_34651-t26_1-p1 ; Align 380990 1 213 utg47_pilon exonerate:protein2genome:local gene 383245 383562 250 + . gene_id 0 ; sequence GL50803_34653-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 383245 383562 . + . utg47_pilon exonerate:protein2genome:local exon 383245 383562 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 383245 383562 250 + . alignment_id 0 ; Query GL50803_34653-t26_1-p1 ; Align 383245 1 318 utg47_pilon exonerate:protein2genome:local gene 384327 384437 115 + . gene_id 0 ; sequence GL50803_34654-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 384327 384437 . + . utg47_pilon exonerate:protein2genome:local exon 384327 384437 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 384327 384437 115 + . alignment_id 0 ; Query GL50803_34654-t26_1-p1 ; Align 384327 1 111 utg11_pilon exonerate:protein2genome:local gene 736810 737769 714 + . gene_id 0 ; sequence GL50803_3467-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 736810 737769 . + . utg11_pilon exonerate:protein2genome:local exon 736810 737769 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 736810 737769 714 + . alignment_id 0 ; Query GL50803_3467-t26_1-p1 ; Align 736810 1 960 utg47_pilon exonerate:protein2genome:local gene 417825 419152 1832 + . gene_id 0 ; sequence GL50803_34684-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 417825 419152 . + . utg47_pilon exonerate:protein2genome:local exon 417825 419152 . + . insertions 0 ; deletions 7 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 417825 419152 1832 + . alignment_id 0 ; Query GL50803_34684-t26_1-p1 ; Align 417825 1 117 ; Align 417942 42 297 ; Align 418241 142 852 ; Align 419093 430 60 utg11_pilon exonerate:protein2genome:local gene 261717 261809 104 + . gene_id 0 ; sequence GL50803_34692-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 261717 261809 . + . utg11_pilon exonerate:protein2genome:local exon 261717 261809 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 261717 261809 104 + . alignment_id 0 ; Query GL50803_34692-t26_1-p1 ; Align 261717 1 93 utg47_pilon exonerate:protein2genome:local gene 425098 425259 177 + . gene_id 0 ; sequence GL50803_34697-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 425098 425259 . + . utg47_pilon exonerate:protein2genome:local exon 425098 425259 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 425098 425259 177 + . alignment_id 0 ; Query GL50803_34697-t26_1-p1 ; Align 425098 1 162 utg47_pilon exonerate:protein2genome:local gene 944684 946732 2982 + . gene_id 0 ; sequence GL50803_3470-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 944684 946732 . + . utg47_pilon exonerate:protein2genome:local exon 944684 946732 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 944684 946732 2982 + . alignment_id 0 ; Query GL50803_3470-t26_1-p1 ; Align 944684 1 2049 utg265_pilon exonerate:protein2genome:local gene 1009163 1009249 137 + . gene_id 0 ; sequence GL50803_34700-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1009163 1009249 . + . utg265_pilon exonerate:protein2genome:local exon 1009163 1009249 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1009163 1009249 137 + . alignment_id 0 ; Query GL50803_34700-t26_1-p1 ; Align 1009163 1 87 utg265_pilon exonerate:protein2genome:local gene 994339 999003 5860 + . gene_id 0 ; sequence GL50803_34701-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 994339 999003 . + . utg265_pilon exonerate:protein2genome:local exon 994339 999003 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 994339 999003 5860 + . alignment_id 0 ; Query GL50803_34701-t26_1-p1 ; Align 994339 1 4665 utg265_pilon exonerate:protein2genome:local gene 1055668 1055766 147 + . gene_id 0 ; sequence GL50803_34706-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1055668 1055766 . + . utg265_pilon exonerate:protein2genome:local exon 1055668 1055766 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1055668 1055766 147 + . alignment_id 0 ; Query GL50803_34706-t26_1-p1 ; Align 1055668 1 99 utg265_pilon exonerate:protein2genome:local gene 1059511 1059591 116 + . gene_id 0 ; sequence GL50803_34707-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1059511 1059591 . + . utg265_pilon exonerate:protein2genome:local exon 1059511 1059591 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1059511 1059591 116 + . alignment_id 0 ; Query GL50803_34707-t26_1-p1 ; Align 1059511 1 81 utg265_pilon exonerate:protein2genome:local gene 1074749 1077607 3389 + . gene_id 0 ; sequence GL50803_34713-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1074749 1077607 . + . utg265_pilon exonerate:protein2genome:local exon 1074749 1077607 . + . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1074749 1077607 3389 + . alignment_id 0 ; Query GL50803_34713-t26_1-p1 ; Align 1074749 1 1482 ; Align 1076234 495 1374 utg265_pilon exonerate:protein2genome:local gene 1044968 1045084 101 + . gene_id 0 ; sequence GL50803_34721-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1044968 1045084 . + . utg265_pilon exonerate:protein2genome:local exon 1044968 1045084 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1044968 1045084 101 + . alignment_id 0 ; Query GL50803_34721-t26_1-p1 ; Align 1044968 1 117 utg265_pilon exonerate:protein2genome:local gene 1069573 1069893 371 + . gene_id 0 ; sequence GL50803_34726-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1069573 1069893 . + . utg265_pilon exonerate:protein2genome:local exon 1069573 1069893 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1069573 1069893 371 + . alignment_id 0 ; Query GL50803_34726-t26_1-p1 ; Align 1069573 1 321 utg349_pilon exonerate:protein2genome:local gene 428826 428948 124 - . gene_id 0 ; sequence GL50803_34732-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 428826 428948 . - . utg349_pilon exonerate:protein2genome:local exon 428826 428948 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 428826 428948 124 - . alignment_id 0 ; Query GL50803_34732-t26_1-p1 ; Align 428949 1 123 utg349_pilon exonerate:protein2genome:local gene 420946 421095 223 - . gene_id 0 ; sequence GL50803_34734-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 420946 421095 . - . utg349_pilon exonerate:protein2genome:local exon 420946 421095 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 420946 421095 223 - . alignment_id 0 ; Query GL50803_34734-t26_1-p1 ; Align 421096 1 150 utg349_pilon exonerate:protein2genome:local gene 429240 429377 125 - . gene_id 0 ; sequence GL50803_34742-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 429240 429377 . - . utg349_pilon exonerate:protein2genome:local exon 429240 429377 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 429240 429377 125 - . alignment_id 0 ; Query GL50803_34742-t26_1-p1 ; Align 429378 1 138 utg349_pilon exonerate:protein2genome:local gene 454805 454909 123 - . gene_id 0 ; sequence GL50803_34745-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 454805 454909 . - . utg349_pilon exonerate:protein2genome:local exon 454805 454909 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 454805 454909 123 - . alignment_id 0 ; Query GL50803_34745-t26_1-p1 ; Align 454910 1 105 utg47_pilon exonerate:protein2genome:local gene 1766255 1768525 2875 + . gene_id 0 ; sequence GL50803_3475-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1766255 1768525 . + . utg47_pilon exonerate:protein2genome:local exon 1766255 1768525 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1766255 1768525 2875 + . alignment_id 0 ; Query GL50803_3475-t26_1-p1 ; Align 1766255 1 1890 ; Align 1768145 632 216 ; Align 1768361 705 165 utg349_pilon exonerate:protein2genome:local gene 1209833 1209961 140 + . gene_id 0 ; sequence GL50803_34755-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1209833 1209961 . + . utg349_pilon exonerate:protein2genome:local exon 1209833 1209961 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1209833 1209961 140 + . alignment_id 0 ; Query GL50803_34755-t26_1-p1 ; Align 1209833 5 129 utg47_pilon exonerate:protein2genome:local gene 945725 945922 227 - . gene_id 0 ; sequence GL50803_34763-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 945725 945922 . - . utg47_pilon exonerate:protein2genome:local exon 945725 945922 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 945725 945922 227 - . alignment_id 0 ; Query GL50803_34763-t26_1-p1 ; Align 945923 1 198 utg47_pilon exonerate:protein2genome:local gene 882070 882225 133 - . gene_id 0 ; sequence GL50803_34773-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 882070 882225 . - . utg47_pilon exonerate:protein2genome:local exon 882070 882225 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 882070 882225 133 - . alignment_id 0 ; Query GL50803_34773-t26_1-p1 ; Align 882226 20 156 utg47_pilon exonerate:protein2genome:local gene 880211 880453 269 - . gene_id 0 ; sequence GL50803_34775-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 880211 880453 . - . utg47_pilon exonerate:protein2genome:local exon 880211 880453 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 880211 880453 269 - . alignment_id 0 ; Query GL50803_34775-t26_1-p1 ; Align 880454 1 243 utg47_pilon exonerate:protein2genome:local gene 967026 967136 102 - . gene_id 0 ; sequence GL50803_34777-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 967026 967136 . - . utg47_pilon exonerate:protein2genome:local exon 967026 967136 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 967026 967136 102 - . alignment_id 0 ; Query GL50803_34777-t26_1-p1 ; Align 967137 1 111 utg47_pilon exonerate:protein2genome:local gene 929572 929742 165 - . gene_id 0 ; sequence GL50803_34785-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 929572 929742 . - . utg47_pilon exonerate:protein2genome:local exon 929572 929742 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 929572 929742 165 - . alignment_id 0 ; Query GL50803_34785-t26_1-p1 ; Align 929743 4 171 utg349_pilon exonerate:protein2genome:local gene 1272435 1272654 285 + . gene_id 0 ; sequence GL50803_34802-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1272435 1272654 . + . utg349_pilon exonerate:protein2genome:local exon 1272435 1272654 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 1272435 1272654 285 + . alignment_id 0 ; Query GL50803_34802-t26_1-p1 ; Align 1272435 1 180 ; Align 1272615 62 6 ; Align 1272622 64 33 utg349_pilon exonerate:protein2genome:local gene 1280410 1280550 151 + . gene_id 0 ; sequence GL50803_34805-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1280410 1280550 . + . utg349_pilon exonerate:protein2genome:local exon 1280410 1280550 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1280410 1280550 151 + . alignment_id 0 ; Query GL50803_34805-t26_1-p1 ; Align 1280410 2 141 utg349_pilon exonerate:protein2genome:local gene 1260156 1260503 350 + . gene_id 0 ; sequence GL50803_34817-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1260156 1260503 . + . utg349_pilon exonerate:protein2genome:local exon 1260156 1260503 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1260156 1260503 350 + . alignment_id 0 ; Query GL50803_34817-t26_1-p1 ; Align 1260156 1 348 utg349_pilon exonerate:protein2genome:local gene 1266716 1266886 163 + . gene_id 0 ; sequence GL50803_34823-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1266716 1266886 . + . utg349_pilon exonerate:protein2genome:local exon 1266716 1266886 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1266716 1266886 163 + . alignment_id 0 ; Query GL50803_34823-t26_1-p1 ; Align 1266716 1 171 utg349_pilon exonerate:protein2genome:local gene 1281909 1282019 134 + . gene_id 0 ; sequence GL50803_34830-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1281909 1282019 . + . utg349_pilon exonerate:protein2genome:local exon 1281909 1282019 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1281909 1282019 134 + . alignment_id 0 ; Query GL50803_34830-t26_1-p1 ; Align 1281909 1 111 utg349_pilon exonerate:protein2genome:local gene 1299905 1300132 238 + . gene_id 0 ; sequence GL50803_34836-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1299905 1300132 . + . utg349_pilon exonerate:protein2genome:local exon 1299905 1300132 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1299905 1300132 238 + . alignment_id 0 ; Query GL50803_34836-t26_1-p1 ; Align 1299905 1 228 utg349_pilon exonerate:protein2genome:local gene 1306583 1306816 209 + . gene_id 0 ; sequence GL50803_34838-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1306583 1306816 . + . utg349_pilon exonerate:protein2genome:local exon 1306583 1306816 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1306583 1306816 209 + . alignment_id 0 ; Query GL50803_34838-t26_1-p1 ; Align 1306583 1 234 utg349_pilon exonerate:protein2genome:local gene 1486358 1486516 126 + . gene_id 0 ; sequence GL50803_34849-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1486358 1486516 . + . utg349_pilon exonerate:protein2genome:local exon 1486358 1486516 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1486358 1486516 126 + . alignment_id 0 ; Query GL50803_34849-t26_1-p1 ; Align 1486358 1 159 utg349_pilon exonerate:protein2genome:local gene 1486696 1486914 365 + . gene_id 0 ; sequence GL50803_34850-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1486696 1486914 . + . utg349_pilon exonerate:protein2genome:local exon 1486696 1486914 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1486696 1486914 365 + . alignment_id 0 ; Query GL50803_34850-t26_1-p1 ; Align 1486696 1 219 utg349_pilon exonerate:protein2genome:local gene 1487615 1487939 445 + . gene_id 0 ; sequence GL50803_34851-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1487615 1487939 . + . utg349_pilon exonerate:protein2genome:local exon 1487615 1487939 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 1487615 1487939 445 + . alignment_id 0 ; Query GL50803_34851-t26_1-p1 ; Align 1487615 1 285 ; Align 1487901 96 39 utg349_pilon exonerate:protein2genome:local gene 1487994 1488167 258 + . gene_id 0 ; sequence GL50803_34852-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1487994 1488167 . + . utg349_pilon exonerate:protein2genome:local exon 1487994 1488167 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1487994 1488167 258 + . alignment_id 0 ; Query GL50803_34852-t26_1-p1 ; Align 1487994 1 174 utg349_pilon exonerate:protein2genome:local gene 1501836 1502087 206 + . gene_id 0 ; sequence GL50803_34863-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1501836 1502087 . + . utg349_pilon exonerate:protein2genome:local exon 1501836 1502087 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1501836 1502087 206 + . alignment_id 0 ; Query GL50803_34863-t26_1-p1 ; Align 1501836 1 252 utg64_pilon exonerate:protein2genome:local gene 720101 720345 230 + . gene_id 0 ; sequence GL50803_34867-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 720101 720345 . + . utg64_pilon exonerate:protein2genome:local exon 720101 720345 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 720101 720345 230 + . alignment_id 0 ; Query GL50803_34867-t26_1-p1 ; Align 720101 1 129 ; Align 720232 44 114 utg64_pilon exonerate:protein2genome:local gene 706044 706253 233 + . gene_id 0 ; sequence GL50803_34882-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 706044 706253 . + . utg64_pilon exonerate:protein2genome:local exon 706044 706253 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 706044 706253 233 + . alignment_id 0 ; Query GL50803_34882-t26_1-p1 ; Align 706044 1 210 utg64_pilon exonerate:protein2genome:local gene 746960 747076 137 + . gene_id 0 ; sequence GL50803_34890-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 746960 747076 . + . utg64_pilon exonerate:protein2genome:local exon 746960 747076 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 746960 747076 137 + . alignment_id 0 ; Query GL50803_34890-t26_1-p1 ; Align 746960 1 117 utg64_pilon exonerate:protein2genome:local gene 756789 756986 170 + . gene_id 0 ; sequence GL50803_34892-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 756789 756986 . + . utg64_pilon exonerate:protein2genome:local exon 756789 756986 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 756789 756986 170 + . alignment_id 0 ; Query GL50803_34892-t26_1-p1 ; Align 756789 1 198 utg731_pilon exonerate:protein2genome:local gene 1164445 1164708 217 - . gene_id 0 ; sequence GL50803_34897-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1164445 1164708 . - . utg731_pilon exonerate:protein2genome:local exon 1164445 1164708 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1164445 1164708 217 - . alignment_id 0 ; Query GL50803_34897-t26_1-p1 ; Align 1164709 1 264 utg99_pilon exonerate:protein2genome:local gene 304320 306551 3436 - . gene_id 0 ; sequence GL50803_3490-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 304320 306551 . - . utg99_pilon exonerate:protein2genome:local exon 304320 306551 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 304320 306551 3436 - . alignment_id 0 ; Query GL50803_3490-t26_1-p1 ; Align 306552 1 2232 utg731_pilon exonerate:protein2genome:local gene 1129455 1142326 2363 - . gene_id 0 ; sequence GL50803_34906-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1140625 1142326 . - . utg731_pilon exonerate:protein2genome:local exon 1140625 1142326 . - . insertions 6 ; deletions 3 utg731_pilon exonerate:protein2genome:local splice5 1140623 1140624 . - . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1129472 1140624 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1129472 1129473 . - . intron_id 0 ; splice_site "AA" utg731_pilon exonerate:protein2genome:local cds 1129455 1129471 . - . utg731_pilon exonerate:protein2genome:local exon 1129455 1129471 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1129455 1142326 2363 - . alignment_id 0 ; Query GL50803_34906-t26_1-p1 ; Align 1142327 1 609 ; Align 1141712 204 111 ; Align 1141601 244 975 ; Align 1129470 570 15 utg99_pilon exonerate:protein2genome:local gene 303440 304273 1252 + . gene_id 0 ; sequence GL50803_3491-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 303440 304273 . + . utg99_pilon exonerate:protein2genome:local exon 303440 304273 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 303440 304273 1252 + . alignment_id 0 ; Query GL50803_3491-t26_1-p1 ; Align 303440 1 834 utg731_pilon exonerate:protein2genome:local gene 1166316 1166837 757 - . gene_id 0 ; sequence GL50803_34921-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1166316 1166837 . - . utg731_pilon exonerate:protein2genome:local exon 1166316 1166837 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1166316 1166837 757 - . alignment_id 0 ; Query GL50803_34921-t26_1-p1 ; Align 1166838 1 522 utg99_pilon exonerate:protein2genome:local gene 302526 303290 1281 - . gene_id 0 ; sequence GL50803_3493-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 302526 303290 . - . utg99_pilon exonerate:protein2genome:local exon 302526 303290 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 302526 303290 1281 - . alignment_id 0 ; Query GL50803_3493-t26_1-p1 ; Align 303291 1 765 utg731_pilon exonerate:protein2genome:local gene 952935 953129 228 - . gene_id 0 ; sequence GL50803_34958-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 952935 953129 . - . utg731_pilon exonerate:protein2genome:local exon 952935 953129 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 952935 953129 228 - . alignment_id 0 ; Query GL50803_34958-t26_1-p1 ; Align 953130 1 195 utg99_pilon exonerate:protein2genome:local gene 42664 42951 237 + . gene_id 0 ; sequence GL50803_34968-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 42664 42851 . + . utg99_pilon exonerate:protein2genome:local exon 42664 42851 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 42852 42853 . + . intron_id 1 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 42852 42905 . + . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 42904 42905 . + . intron_id 0 ; splice_site "AA" utg99_pilon exonerate:protein2genome:local cds 42906 42951 . + . utg99_pilon exonerate:protein2genome:local exon 42906 42951 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 42664 42951 237 + . alignment_id 0 ; Query GL50803_34968-t26_1-p1 ; Align 42664 1 186 ; Align 42907 64 45 utg731_pilon exonerate:protein2genome:local gene 936541 936699 136 - . gene_id 0 ; sequence GL50803_34977-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 936541 936699 . - . utg731_pilon exonerate:protein2genome:local exon 936541 936699 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 936541 936699 136 - . alignment_id 0 ; Query GL50803_34977-t26_1-p1 ; Align 936700 1 159 utg731_pilon exonerate:protein2genome:local gene 822259 822438 132 - . gene_id 0 ; sequence GL50803_34981-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 822259 822438 . - . utg731_pilon exonerate:protein2genome:local exon 822259 822438 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 822259 822438 132 - . alignment_id 0 ; Query GL50803_34981-t26_1-p1 ; Align 822439 1 180 utg731_pilon exonerate:protein2genome:local gene 912217 912324 106 - . gene_id 0 ; sequence GL50803_34988-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 912217 912324 . - . utg731_pilon exonerate:protein2genome:local exon 912217 912324 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 912217 912324 106 - . alignment_id 0 ; Query GL50803_34988-t26_1-p1 ; Align 912325 4 108 utg731_pilon exonerate:protein2genome:local gene 906757 907056 318 - . gene_id 0 ; sequence GL50803_34989-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 906757 907056 . - . utg731_pilon exonerate:protein2genome:local exon 906757 907056 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 906757 907056 318 - . alignment_id 0 ; Query GL50803_34989-t26_1-p1 ; Align 907057 1 90 ; Align 906964 31 207 utg731_pilon exonerate:protein2genome:local gene 880133 880306 146 - . gene_id 0 ; sequence GL50803_34996-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 880133 880306 . - . utg731_pilon exonerate:protein2genome:local exon 880133 880306 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 880133 880306 146 - . alignment_id 0 ; Query GL50803_34996-t26_1-p1 ; Align 880307 19 174 utg731_pilon exonerate:protein2genome:local gene 876020 876160 168 - . gene_id 0 ; sequence GL50803_34999-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 876020 876160 . - . utg731_pilon exonerate:protein2genome:local exon 876020 876160 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 876020 876160 168 - . alignment_id 0 ; Query GL50803_34999-t26_1-p1 ; Align 876161 2 141 utg731_pilon exonerate:protein2genome:local gene 930595 930879 282 - . gene_id 0 ; sequence GL50803_35027-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 930595 930879 . - . utg731_pilon exonerate:protein2genome:local exon 930595 930879 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 930595 930879 282 - . alignment_id 0 ; Query GL50803_35027-t26_1-p1 ; Align 930880 1 285 utg731_pilon exonerate:protein2genome:local gene 890054 890260 149 - . gene_id 0 ; sequence GL50803_35031-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 890054 890260 . - . utg731_pilon exonerate:protein2genome:local exon 890054 890260 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 890054 890260 149 - . alignment_id 0 ; Query GL50803_35031-t26_1-p1 ; Align 890261 1 207 utg731_pilon exonerate:protein2genome:local gene 888407 888712 238 - . gene_id 0 ; sequence GL50803_35033-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 888407 888712 . - . utg731_pilon exonerate:protein2genome:local exon 888407 888712 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 888407 888712 238 - . alignment_id 0 ; Query GL50803_35033-t26_1-p1 ; Align 888713 1 306 utg731_pilon exonerate:protein2genome:local gene 833438 833545 112 - . gene_id 0 ; sequence GL50803_35047-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 833438 833545 . - . utg731_pilon exonerate:protein2genome:local exon 833438 833545 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 833438 833545 112 - . alignment_id 0 ; Query GL50803_35047-t26_1-p1 ; Align 833546 6 108 utg99_pilon exonerate:protein2genome:local gene 404579 404692 106 - . gene_id 0 ; sequence GL50803_35075-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 404579 404692 . - . utg99_pilon exonerate:protein2genome:local exon 404579 404692 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 404579 404692 106 - . alignment_id 0 ; Query GL50803_35075-t26_1-p1 ; Align 404693 3 114 utg47_pilon exonerate:protein2genome:local gene 2238764 2238937 222 - . gene_id 0 ; sequence GL50803_35086-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2238764 2238937 . - . utg47_pilon exonerate:protein2genome:local exon 2238764 2238937 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2238764 2238937 222 - . alignment_id 0 ; Query GL50803_35086-t26_1-p1 ; Align 2238938 1 174 utg47_pilon exonerate:protein2genome:local gene 2133230 2133400 133 - . gene_id 0 ; sequence GL50803_35089-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2133230 2133400 . - . utg47_pilon exonerate:protein2genome:local exon 2133230 2133400 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2133230 2133400 133 - . alignment_id 0 ; Query GL50803_35089-t26_1-p1 ; Align 2133401 1 171 utg47_pilon exonerate:protein2genome:local gene 2132087 2132308 214 - . gene_id 0 ; sequence GL50803_35090-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2132087 2132308 . - . utg47_pilon exonerate:protein2genome:local exon 2132087 2132308 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2132087 2132308 214 - . alignment_id 0 ; Query GL50803_35090-t26_1-p1 ; Align 2132309 1 222 utg47_pilon exonerate:protein2genome:local gene 2124904 2128884 5960 - . gene_id 0 ; sequence GL50803_35094-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2124904 2128884 . - . utg47_pilon exonerate:protein2genome:local exon 2124904 2128884 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2124904 2128884 5960 - . alignment_id 0 ; Query GL50803_35094-t26_1-p1 ; Align 2128885 2 2649 ; Align 2126236 886 1332 utg47_pilon exonerate:protein2genome:local gene 2118694 2118900 301 - . gene_id 0 ; sequence GL50803_35096-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2118694 2118900 . - . utg47_pilon exonerate:protein2genome:local exon 2118694 2118900 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2118694 2118900 301 - . alignment_id 0 ; Query GL50803_35096-t26_1-p1 ; Align 2118901 1 207 utg47_pilon exonerate:protein2genome:local gene 2113483 2113704 193 - . gene_id 0 ; sequence GL50803_35099-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2113483 2113704 . - . utg47_pilon exonerate:protein2genome:local exon 2113483 2113704 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2113483 2113704 193 - . alignment_id 0 ; Query GL50803_35099-t26_1-p1 ; Align 2113705 1 222 utg47_pilon exonerate:protein2genome:local gene 2019825 2020010 120 - . gene_id 0 ; sequence GL50803_35116-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2019825 2020010 . - . utg47_pilon exonerate:protein2genome:local exon 2019825 2020010 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2019825 2020010 120 - . alignment_id 0 ; Query GL50803_35116-t26_1-p1 ; Align 2020011 1 186 utg349_pilon exonerate:protein2genome:local gene 1114071 1114256 120 + . gene_id 0 ; sequence GL50803_35116-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1114071 1114256 . + . utg349_pilon exonerate:protein2genome:local exon 1114071 1114256 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1114071 1114256 120 + . alignment_id 0 ; Query GL50803_35116-t26_1-p1 ; Align 1114071 1 186 utg47_pilon exonerate:protein2genome:local gene 2224022 2224249 231 - . gene_id 0 ; sequence GL50803_35117-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2224022 2224249 . - . utg47_pilon exonerate:protein2genome:local exon 2224022 2224249 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2224022 2224249 231 - . alignment_id 0 ; Query GL50803_35117-t26_1-p1 ; Align 2224250 1 228 utg47_pilon exonerate:protein2genome:local gene 2220845 2220955 133 - . gene_id 0 ; sequence GL50803_35119-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2220845 2220955 . - . utg47_pilon exonerate:protein2genome:local exon 2220845 2220955 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2220845 2220955 133 - . alignment_id 0 ; Query GL50803_35119-t26_1-p1 ; Align 2220956 1 111 utg47_pilon exonerate:protein2genome:local gene 2195426 2195635 190 - . gene_id 0 ; sequence GL50803_35129-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2195426 2195635 . - . utg47_pilon exonerate:protein2genome:local exon 2195426 2195635 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2195426 2195635 190 - . alignment_id 0 ; Query GL50803_35129-t26_1-p1 ; Align 2195636 1 210 utg47_pilon exonerate:protein2genome:local gene 2190066 2190347 289 - . gene_id 0 ; sequence GL50803_35132-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2190066 2190347 . - . utg47_pilon exonerate:protein2genome:local exon 2190066 2190347 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2190066 2190347 289 - . alignment_id 0 ; Query GL50803_35132-t26_1-p1 ; Align 2190348 1 282 utg47_pilon exonerate:protein2genome:local gene 2186418 2186558 191 - . gene_id 0 ; sequence GL50803_35133-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2186418 2186558 . - . utg47_pilon exonerate:protein2genome:local exon 2186418 2186558 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2186418 2186558 191 - . alignment_id 0 ; Query GL50803_35133-t26_1-p1 ; Align 2186559 1 141 utg47_pilon exonerate:protein2genome:local gene 2152471 2154624 2170 - . gene_id 0 ; sequence GL50803_35140-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2152471 2154624 . - . utg47_pilon exonerate:protein2genome:local exon 2152471 2154624 . - . insertions 3 ; deletions 7 utg47_pilon exonerate:protein2genome:local similarity 2152471 2154624 2170 - . alignment_id 0 ; Query GL50803_35140-t26_1-p1 ; Align 2154625 1 999 ; Align 2153626 335 147 ; Align 2153479 385 189 ; Align 2153287 448 150 ; Align 2153137 501 303 ; Align 2152834 604 363 utg47_pilon exonerate:protein2genome:local gene 2078516 2078758 256 - . gene_id 0 ; sequence GL50803_35150-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2078516 2078758 . - . utg47_pilon exonerate:protein2genome:local exon 2078516 2078758 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2078516 2078758 256 - . alignment_id 0 ; Query GL50803_35150-t26_1-p1 ; Align 2078759 1 243 utg47_pilon exonerate:protein2genome:local gene 2047851 2048405 522 - . gene_id 0 ; sequence GL50803_35157-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2047851 2048405 . - . utg47_pilon exonerate:protein2genome:local exon 2047851 2048405 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2047851 2048405 522 - . alignment_id 0 ; Query GL50803_35157-t26_1-p1 ; Align 2048406 1 555 utg47_pilon exonerate:protein2genome:local gene 2043430 2043570 106 - . gene_id 0 ; sequence GL50803_35159-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2043430 2043570 . - . utg47_pilon exonerate:protein2genome:local exon 2043430 2043570 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2043430 2043570 106 - . alignment_id 0 ; Query GL50803_35159-t26_1-p1 ; Align 2043571 1 141 utg47_pilon exonerate:protein2genome:local gene 2224722 2224829 144 - . gene_id 0 ; sequence GL50803_35161-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2224722 2224829 . - . utg47_pilon exonerate:protein2genome:local exon 2224722 2224829 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2224722 2224829 144 - . alignment_id 0 ; Query GL50803_35161-t26_1-p1 ; Align 2224830 1 108 utg47_pilon exonerate:protein2genome:local gene 2191006 2191194 144 - . gene_id 0 ; sequence GL50803_35168-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2191006 2191194 . - . utg47_pilon exonerate:protein2genome:local exon 2191006 2191194 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2191006 2191194 144 - . alignment_id 0 ; Query GL50803_35168-t26_1-p1 ; Align 2191195 1 189 utg47_pilon exonerate:protein2genome:local gene 2148532 2148816 223 - . gene_id 0 ; sequence GL50803_35174-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2148532 2148816 . - . utg47_pilon exonerate:protein2genome:local exon 2148532 2148816 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2148532 2148816 223 - . alignment_id 0 ; Query GL50803_35174-t26_1-p1 ; Align 2148817 1 285 utg47_pilon exonerate:protein2genome:local gene 806342 816023 14534 - . gene_id 0 ; sequence GL50803_35180-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 806342 816023 . - . utg47_pilon exonerate:protein2genome:local exon 806342 816023 . - . insertions 18 ; deletions 8 ; frameshifts 7 utg47_pilon exonerate:protein2genome:local similarity 806342 816023 14534 - . alignment_id 0 ; Query GL50803_35180-t26_1-p1 ; Align 816024 1 1467 ; Align 814545 490 579 ; Align 813960 683 54 ; Align 813905 701 945 ; Align 812958 1017 894 ; Align 812064 1317 276 ; Align 811788 1412 3012 ; Align 808774 2417 1212 ; Align 807560 2822 1218 utg47_pilon exonerate:protein2genome:local gene 719479 754901 129 + . gene_id 0 ; sequence GL50803_35192-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 719479 719666 . + . utg47_pilon exonerate:protein2genome:local exon 719479 719666 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 719667 719668 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 719667 754873 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 754872 754873 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 754874 754901 . + . utg47_pilon exonerate:protein2genome:local exon 754874 754901 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 719479 754901 129 + . alignment_id 0 ; Query GL50803_35192-t26_1-p1 ; Align 719479 7 90 ; Align 719575 37 90 ; Align 754875 68 27 utg99_pilon exonerate:protein2genome:local gene 144561 144809 253 - . gene_id 0 ; sequence GL50803_35202-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 144561 144809 . - . utg99_pilon exonerate:protein2genome:local exon 144561 144809 . - . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 144561 144809 253 - . alignment_id 0 ; Query GL50803_35202-t26_1-p1 ; Align 144810 1 129 ; Align 144681 45 120 utg308_pilon exonerate:protein2genome:local gene 537094 537245 149 + . gene_id 0 ; sequence GL50803_35214-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 537094 537245 . + . utg308_pilon exonerate:protein2genome:local exon 537094 537245 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 537094 537245 149 + . alignment_id 0 ; Query GL50803_35214-t26_1-p1 ; Align 537094 1 81 ; Align 537177 28 69 utg308_pilon exonerate:protein2genome:local gene 525597 525719 131 + . gene_id 0 ; sequence GL50803_35228-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 525597 525719 . + . utg308_pilon exonerate:protein2genome:local exon 525597 525719 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 525597 525719 131 + . alignment_id 0 ; Query GL50803_35228-t26_1-p1 ; Align 525597 1 123 utg11_pilon exonerate:protein2genome:local gene 1213498 1213698 145 - . gene_id 0 ; sequence GL50803_35230-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1213498 1213698 . - . utg11_pilon exonerate:protein2genome:local exon 1213498 1213698 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1213498 1213698 145 - . alignment_id 0 ; Query GL50803_35230-t26_1-p1 ; Align 1213699 1 201 utg11_pilon exonerate:protein2genome:local gene 1210111 1210215 128 - . gene_id 0 ; sequence GL50803_35231-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1210111 1210215 . - . utg11_pilon exonerate:protein2genome:local exon 1210111 1210215 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1210111 1210215 128 - . alignment_id 0 ; Query GL50803_35231-t26_1-p1 ; Align 1210216 2 105 utg11_pilon exonerate:protein2genome:local gene 1185190 1185303 103 - . gene_id 0 ; sequence GL50803_35238-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1185190 1185303 . - . utg11_pilon exonerate:protein2genome:local exon 1185190 1185303 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1185190 1185303 103 - . alignment_id 0 ; Query GL50803_35238-t26_1-p1 ; Align 1185304 8 114 utg47_pilon exonerate:protein2genome:local gene 911625 911963 343 - . gene_id 0 ; sequence GL50803_35241-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 911625 911963 . - . utg47_pilon exonerate:protein2genome:local exon 911625 911963 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 911625 911963 343 - . alignment_id 0 ; Query GL50803_35241-t26_1-p1 ; Align 911964 1 339 utg11_pilon exonerate:protein2genome:local gene 1217848 1218030 104 - . gene_id 0 ; sequence GL50803_35243-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1217848 1218030 . - . utg11_pilon exonerate:protein2genome:local exon 1217848 1218030 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1217848 1218030 104 - . alignment_id 0 ; Query GL50803_35243-t26_1-p1 ; Align 1218031 4 183 utg11_pilon exonerate:protein2genome:local gene 1173564 1173671 115 - . gene_id 0 ; sequence GL50803_35250-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1173564 1173671 . - . utg11_pilon exonerate:protein2genome:local exon 1173564 1173671 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1173564 1173671 115 - . alignment_id 0 ; Query GL50803_35250-t26_1-p1 ; Align 1173672 4 108 utg47_pilon exonerate:protein2genome:local gene 913582 913689 115 - . gene_id 0 ; sequence GL50803_35250-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 913582 913689 . - . utg47_pilon exonerate:protein2genome:local exon 913582 913689 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 913582 913689 115 - . alignment_id 0 ; Query GL50803_35250-t26_1-p1 ; Align 913690 4 108 utg11_pilon exonerate:protein2genome:local gene 1035574 1035795 221 - . gene_id 0 ; sequence GL50803_35259-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1035574 1035795 . - . utg11_pilon exonerate:protein2genome:local exon 1035574 1035795 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1035574 1035795 221 - . alignment_id 0 ; Query GL50803_35259-t26_1-p1 ; Align 1035796 1 51 ; Align 1035745 19 171 utg11_pilon exonerate:protein2genome:local gene 999520 999744 235 + . gene_id 0 ; sequence GL50803_35265-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 999520 999744 . + . utg11_pilon exonerate:protein2genome:local exon 999520 999744 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 999520 999744 235 + . alignment_id 0 ; Query GL50803_35265-t26_1-p1 ; Align 999520 1 225 utg11_pilon exonerate:protein2genome:local gene 1046087 1046293 179 - . gene_id 0 ; sequence GL50803_35268-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1046087 1046293 . - . utg11_pilon exonerate:protein2genome:local exon 1046087 1046293 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1046087 1046293 179 - . alignment_id 0 ; Query GL50803_35268-t26_1-p1 ; Align 1046294 1 207 utg11_pilon exonerate:protein2genome:local gene 1062325 1062456 159 - . gene_id 0 ; sequence GL50803_35275-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1062325 1062456 . - . utg11_pilon exonerate:protein2genome:local exon 1062325 1062456 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1062325 1062456 159 - . alignment_id 0 ; Query GL50803_35275-t26_1-p1 ; Align 1062457 1 132 utg731_pilon exonerate:protein2genome:local gene 284347 285345 1196 + . gene_id 0 ; sequence GL50803_3528-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 284347 285345 . + . utg731_pilon exonerate:protein2genome:local exon 284347 285345 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 284347 285345 1196 + . alignment_id 0 ; Query GL50803_3528-t26_1-p1 ; Align 284347 1 999 utg349_pilon exonerate:protein2genome:local gene 1335476 1335667 176 + . gene_id 0 ; sequence GL50803_35301-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1335476 1335667 . + . utg349_pilon exonerate:protein2genome:local exon 1335476 1335667 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1335476 1335667 176 + . alignment_id 0 ; Query GL50803_35301-t26_1-p1 ; Align 1335476 1 192 utg349_pilon exonerate:protein2genome:local gene 1392895 1393092 228 + . gene_id 0 ; sequence GL50803_35309-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1392895 1393092 . + . utg349_pilon exonerate:protein2genome:local exon 1392895 1393092 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1392895 1393092 228 + . alignment_id 0 ; Query GL50803_35309-t26_1-p1 ; Align 1392895 1 198 utg731_pilon exonerate:protein2genome:local gene 281922 283049 1940 - . gene_id 0 ; sequence GL50803_3531-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 281922 283049 . - . utg731_pilon exonerate:protein2genome:local exon 281922 283049 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 281922 283049 1940 - . alignment_id 0 ; Query GL50803_3531-t26_1-p1 ; Align 283050 1 1128 utg18_pilon exonerate:protein2genome:local gene 254088 254189 113 - . gene_id 0 ; sequence GL50803_35310-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 254088 254189 . - . utg18_pilon exonerate:protein2genome:local exon 254088 254189 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 254088 254189 113 - . alignment_id 0 ; Query GL50803_35310-t26_1-p1 ; Align 254190 1 102 utg47_pilon exonerate:protein2genome:local gene 2256492 2256827 273 + . gene_id 0 ; sequence GL50803_35316-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2256492 2256827 . + . utg47_pilon exonerate:protein2genome:local exon 2256492 2256827 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2256492 2256827 273 + . alignment_id 0 ; Query GL50803_35316-t26_1-p1 ; Align 2256492 1 336 utg47_pilon exonerate:protein2genome:local gene 2265995 2266330 273 - . gene_id 0 ; sequence GL50803_35316-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2265995 2266330 . - . utg47_pilon exonerate:protein2genome:local exon 2265995 2266330 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2265995 2266330 273 - . alignment_id 0 ; Query GL50803_35316-t26_1-p1 ; Align 2266331 1 336 utg18_pilon exonerate:protein2genome:local gene 552578 557507 6418 + . gene_id 0 ; sequence GL50803_35332-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 552578 552661 . + . utg18_pilon exonerate:protein2genome:local exon 552578 552661 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 552662 552663 . + . intron_id 1 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 552662 552881 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 552880 552881 . + . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 552882 557507 . + . utg18_pilon exonerate:protein2genome:local exon 552882 557507 . + . insertions 0 ; deletions 5 utg18_pilon exonerate:protein2genome:local similarity 552578 557507 6418 + . alignment_id 0 ; Query GL50803_35332-t26_1-p1 ; Align 552578 3 84 ; Align 552882 31 615 ; Align 553497 239 2157 ; Align 555654 959 240 ; Align 555894 1040 1614 utg349_pilon exonerate:protein2genome:local gene 561498 582335 29407 - . gene_id 0 ; sequence GL50803_35341-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 561498 582335 . - . utg349_pilon exonerate:protein2genome:local exon 561498 582335 . - . insertions 27 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 561498 582335 29407 - . alignment_id 0 ; Query GL50803_35341-t26_1-p1 ; Align 582336 1 1290 ; Align 581040 431 1509 ; Align 579519 934 117 ; Align 579402 974 1998 ; Align 577401 1640 36 ; Align 577359 1652 6504 ; Align 570855 3821 9357 utg349_pilon exonerate:protein2genome:local gene 612851 613141 318 - . gene_id 0 ; sequence GL50803_35351-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 612851 613141 . - . utg349_pilon exonerate:protein2genome:local exon 612851 613141 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 612851 613141 318 - . alignment_id 0 ; Query GL50803_35351-t26_1-p1 ; Align 613142 1 291 utg349_pilon exonerate:protein2genome:local gene 611656 611871 166 - . gene_id 0 ; sequence GL50803_35352-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 611656 611871 . - . utg349_pilon exonerate:protein2genome:local exon 611656 611871 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 611656 611871 166 - . alignment_id 0 ; Query GL50803_35352-t26_1-p1 ; Align 611872 1 216 utg349_pilon exonerate:protein2genome:local gene 607106 607303 200 - . gene_id 0 ; sequence GL50803_35353-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 607106 607303 . - . utg349_pilon exonerate:protein2genome:local exon 607106 607303 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 607106 607303 200 - . alignment_id 0 ; Query GL50803_35353-t26_1-p1 ; Align 607304 1 198 utg64_pilon exonerate:protein2genome:local gene 199112 199276 155 + . gene_id 0 ; sequence GL50803_35356-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 199112 199276 . + . utg64_pilon exonerate:protein2genome:local exon 199112 199276 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 199112 199276 155 + . alignment_id 0 ; Query GL50803_35356-t26_1-p1 ; Align 199112 1 165 utg64_pilon exonerate:protein2genome:local gene 208824 208988 155 - . gene_id 0 ; sequence GL50803_35356-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 208824 208988 . - . utg64_pilon exonerate:protein2genome:local exon 208824 208988 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 208824 208988 155 - . alignment_id 0 ; Query GL50803_35356-t26_1-p1 ; Align 208989 1 165 utg64_pilon exonerate:protein2genome:local gene 135667 135831 155 - . gene_id 0 ; sequence GL50803_35356-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 135667 135831 . - . utg64_pilon exonerate:protein2genome:local exon 135667 135831 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 135667 135831 155 - . alignment_id 0 ; Query GL50803_35356-t26_1-p1 ; Align 135832 1 165 utg349_pilon exonerate:protein2genome:local gene 561132 561302 174 - . gene_id 0 ; sequence GL50803_35364-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 561132 561302 . - . utg349_pilon exonerate:protein2genome:local exon 561132 561302 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 561132 561302 174 - . alignment_id 0 ; Query GL50803_35364-t26_1-p1 ; Align 561303 3 171 utg47_pilon exonerate:protein2genome:local gene 1906297 1907145 1343 - . gene_id 0 ; sequence GL50803_3538-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1906297 1907145 . - . utg47_pilon exonerate:protein2genome:local exon 1906297 1907145 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1906297 1907145 1343 - . alignment_id 0 ; Query GL50803_3538-t26_1-p1 ; Align 1907146 1 744 ; Align 1906402 250 105 utg47_pilon exonerate:protein2genome:local gene 1714700 1714828 150 + . gene_id 0 ; sequence GL50803_35380-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1714700 1714828 . + . utg47_pilon exonerate:protein2genome:local exon 1714700 1714828 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1714700 1714828 150 + . alignment_id 0 ; Query GL50803_35380-t26_1-p1 ; Align 1714700 1 129 utg47_pilon exonerate:protein2genome:local gene 1740917 1741039 146 + . gene_id 0 ; sequence GL50803_35384-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1740917 1741039 . + . utg47_pilon exonerate:protein2genome:local exon 1740917 1741039 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1740917 1741039 146 + . alignment_id 0 ; Query GL50803_35384-t26_1-p1 ; Align 1740917 1 123 utg99_pilon exonerate:protein2genome:local gene 503709 504248 496 + . gene_id 0 ; sequence GL50803_35389-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 503709 504248 . + . utg99_pilon exonerate:protein2genome:local exon 503709 504248 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 503709 504248 496 + . alignment_id 0 ; Query GL50803_35389-t26_1-p1 ; Align 503709 1 540 utg47_pilon exonerate:protein2genome:local gene 1907203 1908468 1666 + . gene_id 0 ; sequence GL50803_3539-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1907203 1908468 . + . utg47_pilon exonerate:protein2genome:local exon 1907203 1908468 . + . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 1907203 1908468 1666 + . alignment_id 0 ; Query GL50803_3539-t26_1-p1 ; Align 1907203 1 918 ; Align 1908121 311 60 ; Align 1908181 332 288 utg99_pilon exonerate:protein2genome:local gene 501966 502142 208 + . gene_id 0 ; sequence GL50803_35402-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 501966 502142 . + . utg99_pilon exonerate:protein2genome:local exon 501966 502142 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 501966 502142 208 + . alignment_id 0 ; Query GL50803_35402-t26_1-p1 ; Align 501966 1 177 utg47_pilon exonerate:protein2genome:local gene 1175670 1179319 5544 + . gene_id 0 ; sequence GL50803_35428-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1175670 1179319 . + . utg47_pilon exonerate:protein2genome:local exon 1175670 1179319 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1175670 1179319 5544 + . alignment_id 0 ; Query GL50803_35428-t26_1-p1 ; Align 1175670 1 984 ; Align 1176654 330 1242 ; Align 1177898 745 1422 utg308_pilon exonerate:protein2genome:local gene 812948 813306 151 + . gene_id 0 ; sequence GL50803_35447-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 812948 813306 . + . utg308_pilon exonerate:protein2genome:local exon 812948 813306 . + . insertions 12 ; deletions 1 ; frameshifts 5 utg308_pilon exonerate:protein2genome:local similarity 812948 813306 151 + . alignment_id 0 ; Query GL50803_35447-t26_1-p1 ; Align 812948 6 51 ; Align 812999 24 30 ; Align 813034 34 87 ; Align 813124 63 51 ; Align 813178 80 15 ; Align 813199 85 108 utg308_pilon exonerate:protein2genome:local gene 835950 836308 151 - . gene_id 0 ; sequence GL50803_35447-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 835950 836308 . - . utg308_pilon exonerate:protein2genome:local exon 835950 836308 . - . insertions 12 ; deletions 1 ; frameshifts 5 utg308_pilon exonerate:protein2genome:local similarity 835950 836308 151 - . alignment_id 0 ; Query GL50803_35447-t26_1-p1 ; Align 836309 6 51 ; Align 836258 24 30 ; Align 836223 34 87 ; Align 836133 63 51 ; Align 836079 80 15 ; Align 836058 85 108 utg212_pilon exonerate:protein2genome:local gene 26837 26986 136 + . gene_id 0 ; sequence GL50803_35452-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 26837 26986 . + . utg212_pilon exonerate:protein2genome:local exon 26837 26986 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 26837 26986 136 + . alignment_id 0 ; Query GL50803_35452-t26_1-p1 ; Align 26837 1 150 utg11_pilon exonerate:protein2genome:local gene 390058 441720 366 + . gene_id 0 ; sequence GL50803_35454-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 390058 390223 . + . utg11_pilon exonerate:protein2genome:local exon 390058 390223 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 390224 390225 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 390224 441592 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 441591 441592 . + . intron_id 0 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 441593 441720 . + . utg11_pilon exonerate:protein2genome:local exon 441593 441720 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 390058 441720 366 + . alignment_id 0 ; Query GL50803_35454-t26_1-p1 ; Align 390058 2 165 ; Align 441595 58 126 utg212_pilon exonerate:protein2genome:local gene 30660 30752 125 + . gene_id 0 ; sequence GL50803_35455-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 30660 30752 . + . utg212_pilon exonerate:protein2genome:local exon 30660 30752 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 30660 30752 125 + . alignment_id 0 ; Query GL50803_35455-t26_1-p1 ; Align 30660 4 93 utg212_pilon exonerate:protein2genome:local gene 31083 31325 240 + . gene_id 0 ; sequence GL50803_35456-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 31083 31325 . + . utg212_pilon exonerate:protein2genome:local exon 31083 31325 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 31083 31325 240 + . alignment_id 0 ; Query GL50803_35456-t26_1-p1 ; Align 31083 1 243 utg212_pilon exonerate:protein2genome:local gene 36793 36993 141 + . gene_id 0 ; sequence GL50803_35458-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 36793 36993 . + . utg212_pilon exonerate:protein2genome:local exon 36793 36993 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 36793 36993 141 + . alignment_id 0 ; Query GL50803_35458-t26_1-p1 ; Align 36793 1 201 utg212_pilon exonerate:protein2genome:local gene 18515 18850 277 + . gene_id 0 ; sequence GL50803_35459-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 18515 18850 . + . utg212_pilon exonerate:protein2genome:local exon 18515 18850 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 18515 18850 277 + . alignment_id 0 ; Query GL50803_35459-t26_1-p1 ; Align 18515 7 336 utg11_pilon exonerate:protein2genome:local gene 1700593 1702140 2079 - . gene_id 0 ; sequence GL50803_3546-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1700593 1702140 . - . utg11_pilon exonerate:protein2genome:local exon 1700593 1702140 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1700593 1702140 2079 - . alignment_id 0 ; Query GL50803_3546-t26_1-p1 ; Align 1702141 1 1548 utg47_pilon exonerate:protein2genome:local gene 2013997 2014128 146 - . gene_id 0 ; sequence GL50803_35473-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2013997 2014128 . - . utg47_pilon exonerate:protein2genome:local exon 2013997 2014128 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2013997 2014128 146 - . alignment_id 0 ; Query GL50803_35473-t26_1-p1 ; Align 2014129 1 132 utg212_pilon exonerate:protein2genome:local gene 7618 7749 146 + . gene_id 0 ; sequence GL50803_35473-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 7618 7749 . + . utg212_pilon exonerate:protein2genome:local exon 7618 7749 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 7618 7749 146 + . alignment_id 0 ; Query GL50803_35473-t26_1-p1 ; Align 7618 1 132 utg11_pilon exonerate:protein2genome:local gene 483843 483986 152 - . gene_id 0 ; sequence GL50803_35480-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 483843 483986 . - . utg11_pilon exonerate:protein2genome:local exon 483843 483986 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 483843 483986 152 - . alignment_id 0 ; Query GL50803_35480-t26_1-p1 ; Align 483987 41 144 utg11_pilon exonerate:protein2genome:local gene 1579377 1579478 129 + . gene_id 0 ; sequence GL50803_35481-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1579377 1579478 . + . utg11_pilon exonerate:protein2genome:local exon 1579377 1579478 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1579377 1579478 129 + . alignment_id 0 ; Query GL50803_35481-t26_1-p1 ; Align 1579377 1 27 ; Align 1579404 11 75 utg11_pilon exonerate:protein2genome:local gene 1547749 1558671 13735 + . gene_id 0 ; sequence GL50803_35487-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1547749 1558671 . + . utg11_pilon exonerate:protein2genome:local exon 1547749 1558671 . + . insertions 18 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 1547749 1558671 13735 + . alignment_id 0 ; Query GL50803_35487-t26_1-p1 ; Align 1547749 1 6036 ; Align 1553794 2013 240 ; Align 1554034 2096 876 ; Align 1554916 2388 1377 ; Align 1556296 2847 2376 utg11_pilon exonerate:protein2genome:local gene 1705493 1706416 1080 - . gene_id 0 ; sequence GL50803_3549-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1705493 1706416 . - . utg11_pilon exonerate:protein2genome:local exon 1705493 1706416 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1705493 1706416 1080 - . alignment_id 0 ; Query GL50803_3549-t26_1-p1 ; Align 1706417 1 924 utg11_pilon exonerate:protein2genome:local gene 1574474 1574578 116 + . gene_id 0 ; sequence GL50803_35494-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1574474 1574578 . + . utg11_pilon exonerate:protein2genome:local exon 1574474 1574578 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1574474 1574578 116 + . alignment_id 0 ; Query GL50803_35494-t26_1-p1 ; Align 1574474 1 105 utg11_pilon exonerate:protein2genome:local gene 1547134 1547298 151 + . gene_id 0 ; sequence GL50803_35498-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1547134 1547298 . + . utg11_pilon exonerate:protein2genome:local exon 1547134 1547298 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1547134 1547298 151 + . alignment_id 0 ; Query GL50803_35498-t26_1-p1 ; Align 1547134 1 165 utg731_pilon exonerate:protein2genome:local gene 1201583 1201792 188 + . gene_id 0 ; sequence GL50803_35504-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1201583 1201792 . + . utg731_pilon exonerate:protein2genome:local exon 1201583 1201792 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1201583 1201792 188 + . alignment_id 0 ; Query GL50803_35504-t26_1-p1 ; Align 1201583 1 210 utg731_pilon exonerate:protein2genome:local gene 1204402 1204572 256 + . gene_id 0 ; sequence GL50803_35506-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1204402 1204572 . + . utg731_pilon exonerate:protein2genome:local exon 1204402 1204572 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1204402 1204572 256 + . alignment_id 0 ; Query GL50803_35506-t26_1-p1 ; Align 1204402 1 171 utg731_pilon exonerate:protein2genome:local gene 1233072 1233230 133 + . gene_id 0 ; sequence GL50803_35512-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1233072 1233230 . + . utg731_pilon exonerate:protein2genome:local exon 1233072 1233230 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1233072 1233230 133 + . alignment_id 0 ; Query GL50803_35512-t26_1-p1 ; Align 1233072 1 81 ; Align 1233153 29 78 utg731_pilon exonerate:protein2genome:local gene 1198104 1198229 128 + . gene_id 0 ; sequence GL50803_35519-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1198104 1198229 . + . utg731_pilon exonerate:protein2genome:local exon 1198104 1198229 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1198104 1198229 128 + . alignment_id 0 ; Query GL50803_35519-t26_1-p1 ; Align 1198104 1 126 utg731_pilon exonerate:protein2genome:local gene 1198714 1198911 119 + . gene_id 0 ; sequence GL50803_35522-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1198714 1198911 . + . utg731_pilon exonerate:protein2genome:local exon 1198714 1198911 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1198714 1198911 119 + . alignment_id 0 ; Query GL50803_35522-t26_1-p1 ; Align 1198714 1 72 ; Align 1198786 26 126 utg731_pilon exonerate:protein2genome:local gene 1195455 1195739 251 + . gene_id 0 ; sequence GL50803_35534-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1195455 1195739 . + . utg731_pilon exonerate:protein2genome:local exon 1195455 1195739 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1195455 1195739 251 + . alignment_id 0 ; Query GL50803_35534-t26_1-p1 ; Align 1195455 1 285 utg212_pilon exonerate:protein2genome:local gene 63604 63750 135 - . gene_id 0 ; sequence GL50803_35556-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 63604 63750 . - . utg212_pilon exonerate:protein2genome:local exon 63604 63750 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 63604 63750 135 - . alignment_id 0 ; Query GL50803_35556-t26_1-p1 ; Align 63751 1 147 utg212_pilon exonerate:protein2genome:local gene 99483 99569 114 - . gene_id 0 ; sequence GL50803_35562-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 99483 99569 . - . utg212_pilon exonerate:protein2genome:local exon 99483 99569 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 99483 99569 114 - . alignment_id 0 ; Query GL50803_35562-t26_1-p1 ; Align 99570 4 87 utg212_pilon exonerate:protein2genome:local gene 89695 89820 113 - . gene_id 0 ; sequence GL50803_35565-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 89695 89820 . - . utg212_pilon exonerate:protein2genome:local exon 89695 89820 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 89695 89820 113 - . alignment_id 0 ; Query GL50803_35565-t26_1-p1 ; Align 89821 1 126 utg212_pilon exonerate:protein2genome:local gene 80736 80936 190 - . gene_id 0 ; sequence GL50803_35570-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 80736 80936 . - . utg212_pilon exonerate:protein2genome:local exon 80736 80936 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 80736 80936 190 - . alignment_id 0 ; Query GL50803_35570-t26_1-p1 ; Align 80937 1 201 utg212_pilon exonerate:protein2genome:local gene 77342 77524 186 - . gene_id 0 ; sequence GL50803_35571-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 77342 77524 . - . utg212_pilon exonerate:protein2genome:local exon 77342 77524 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 77342 77524 186 - . alignment_id 0 ; Query GL50803_35571-t26_1-p1 ; Align 77525 1 183 utg212_pilon exonerate:protein2genome:local gene 106504 106806 349 - . gene_id 0 ; sequence GL50803_35574-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 106504 106806 . - . utg212_pilon exonerate:protein2genome:local exon 106504 106806 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 106504 106806 349 - . alignment_id 0 ; Query GL50803_35574-t26_1-p1 ; Align 106807 1 303 utg11_pilon exonerate:protein2genome:local gene 1644869 1645522 874 + . gene_id 0 ; sequence GL50803_3559-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1644869 1645522 . + . utg11_pilon exonerate:protein2genome:local exon 1644869 1645522 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1644869 1645522 874 + . alignment_id 0 ; Query GL50803_3559-t26_1-p1 ; Align 1644869 1 654 utg47_pilon exonerate:protein2genome:local gene 180030 180266 118 + . gene_id 0 ; sequence GL50803_35621-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 180030 180266 . + . utg47_pilon exonerate:protein2genome:local exon 180030 180266 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 180030 180266 118 + . alignment_id 0 ; Query GL50803_35621-t26_1-p1 ; Align 180030 1 237 utg47_pilon exonerate:protein2genome:local gene 972363 973622 1593 + . gene_id 0 ; sequence GL50803_3563-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 972363 973622 . + . utg47_pilon exonerate:protein2genome:local exon 972363 973622 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 972363 973622 1593 + . alignment_id 0 ; Query GL50803_3563-t26_1-p1 ; Align 972363 1 474 ; Align 972843 159 780 utg47_pilon exonerate:protein2genome:local gene 205556 205882 258 - . gene_id 0 ; sequence GL50803_35636-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 205556 205882 . - . utg47_pilon exonerate:protein2genome:local exon 205556 205882 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 205556 205882 258 - . alignment_id 0 ; Query GL50803_35636-t26_1-p1 ; Align 205883 1 327 utg47_pilon exonerate:protein2genome:local gene 195151 195447 258 - . gene_id 0 ; sequence GL50803_35639-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 195151 195447 . - . utg47_pilon exonerate:protein2genome:local exon 195151 195447 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 195151 195447 258 - . alignment_id 0 ; Query GL50803_35639-t26_1-p1 ; Align 195448 1 297 utg47_pilon exonerate:protein2genome:local gene 973648 975891 2778 + . gene_id 0 ; sequence GL50803_3564-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 973648 975891 . + . utg47_pilon exonerate:protein2genome:local exon 973648 975891 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 973648 975891 2778 + . alignment_id 0 ; Query GL50803_3564-t26_1-p1 ; Align 973648 2 1755 ; Align 975403 588 372 ; Align 975775 713 117 utg349_pilon exonerate:protein2genome:local gene 479769 479912 114 - . gene_id 0 ; sequence GL50803_35646-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 479769 479912 . - . utg349_pilon exonerate:protein2genome:local exon 479769 479912 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 479769 479912 114 - . alignment_id 0 ; Query GL50803_35646-t26_1-p1 ; Align 479913 1 144 utg47_pilon exonerate:protein2genome:local gene 976056 977714 2479 + . gene_id 0 ; sequence GL50803_3565-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 976056 977714 . + . utg47_pilon exonerate:protein2genome:local exon 976056 977714 . + . insertions 3 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 976056 977714 2479 + . alignment_id 0 ; Query GL50803_3565-t26_1-p1 ; Align 976056 1 1104 ; Align 977163 369 51 ; Align 977214 389 501 utg47_pilon exonerate:protein2genome:local gene 2002001 2002138 201 - . gene_id 0 ; sequence GL50803_35669-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2002001 2002138 . - . utg47_pilon exonerate:protein2genome:local exon 2002001 2002138 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2002001 2002138 201 - . alignment_id 0 ; Query GL50803_35669-t26_1-p1 ; Align 2002139 1 138 utg47_pilon exonerate:protein2genome:local gene 1996220 1997401 1924 - . gene_id 0 ; sequence GL50803_35670-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1996220 1997401 . - . utg47_pilon exonerate:protein2genome:local exon 1996220 1997401 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1996220 1997401 1924 - . alignment_id 0 ; Query GL50803_35670-t26_1-p1 ; Align 1997402 1 1182 utg47_pilon exonerate:protein2genome:local gene 2004113 2004379 191 - . gene_id 0 ; sequence GL50803_35682-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2004113 2004379 . - . utg47_pilon exonerate:protein2genome:local exon 2004113 2004379 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2004113 2004379 191 - . alignment_id 0 ; Query GL50803_35682-t26_1-p1 ; Align 2004380 1 267 utg47_pilon exonerate:protein2genome:local gene 1982447 1983520 1041 - . gene_id 0 ; sequence GL50803_35691-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1982447 1983520 . - . utg47_pilon exonerate:protein2genome:local exon 1982447 1983520 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1982447 1983520 1041 - . alignment_id 0 ; Query GL50803_35691-t26_1-p1 ; Align 1983521 1 1074 utg11_pilon exonerate:protein2genome:local gene 1129795 1129993 252 - . gene_id 0 ; sequence GL50803_3570-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1129795 1129993 . - . utg11_pilon exonerate:protein2genome:local exon 1129795 1129993 . - . insertions 3 ; deletions 0 ; frameshifts 4 utg11_pilon exonerate:protein2genome:local similarity 1129795 1129993 252 - . alignment_id 0 ; Query GL50803_3570-t26_1-p1 ; Align 1129994 1 48 ; Align 1129939 17 144 utg47_pilon exonerate:protein2genome:local gene 1954380 1954529 120 - . gene_id 0 ; sequence GL50803_35704-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1954380 1954529 . - . utg47_pilon exonerate:protein2genome:local exon 1954380 1954529 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1954380 1954529 120 - . alignment_id 0 ; Query GL50803_35704-t26_1-p1 ; Align 1954530 1 150 utg47_pilon exonerate:protein2genome:local gene 1890577 1890729 139 - . gene_id 0 ; sequence GL50803_35705-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1890577 1890729 . - . utg47_pilon exonerate:protein2genome:local exon 1890577 1890729 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1890577 1890729 139 - . alignment_id 0 ; Query GL50803_35705-t26_1-p1 ; Align 1890730 1 153 utg47_pilon exonerate:protein2genome:local gene 1882080 1882328 158 - . gene_id 0 ; sequence GL50803_35708-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1882080 1882328 . - . utg47_pilon exonerate:protein2genome:local exon 1882080 1882328 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1882080 1882328 158 - . alignment_id 0 ; Query GL50803_35708-t26_1-p1 ; Align 1882329 2 249 utg47_pilon exonerate:protein2genome:local gene 1877076 1877285 196 - . gene_id 0 ; sequence GL50803_35711-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1877076 1877285 . - . utg47_pilon exonerate:protein2genome:local exon 1877076 1877285 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1877076 1877285 196 - . alignment_id 0 ; Query GL50803_35711-t26_1-p1 ; Align 1877286 1 123 ; Align 1877163 43 87 utg47_pilon exonerate:protein2genome:local gene 1900422 1900592 193 - . gene_id 0 ; sequence GL50803_35719-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1900422 1900592 . - . utg47_pilon exonerate:protein2genome:local exon 1900422 1900592 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1900422 1900592 193 - . alignment_id 0 ; Query GL50803_35719-t26_1-p1 ; Align 1900593 1 171 utg47_pilon exonerate:protein2genome:local gene 125070 125211 221 - . gene_id 0 ; sequence GL50803_35735-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 125070 125211 . - . utg47_pilon exonerate:protein2genome:local exon 125070 125211 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 125070 125211 221 - . alignment_id 0 ; Query GL50803_35735-t26_1-p1 ; Align 125212 1 63 ; Align 125148 22 78 utg47_pilon exonerate:protein2genome:local gene 99685 99963 371 - . gene_id 0 ; sequence GL50803_35743-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 99685 99963 . - . utg47_pilon exonerate:protein2genome:local exon 99685 99963 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 99685 99963 371 - . alignment_id 0 ; Query GL50803_35743-t26_1-p1 ; Align 99964 1 279 utg47_pilon exonerate:protein2genome:local gene 153883 153993 112 - . gene_id 0 ; sequence GL50803_35748-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 153883 153993 . - . utg47_pilon exonerate:protein2genome:local exon 153883 153993 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 153883 153993 112 - . alignment_id 0 ; Query GL50803_35748-t26_1-p1 ; Align 153994 1 111 utg47_pilon exonerate:protein2genome:local gene 164591 164908 329 - . gene_id 0 ; sequence GL50803_35752-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 164591 164908 . - . utg47_pilon exonerate:protein2genome:local exon 164591 164908 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 164591 164908 329 - . alignment_id 0 ; Query GL50803_35752-t26_1-p1 ; Align 164909 1 318 utg47_pilon exonerate:protein2genome:local gene 134196 134357 180 - . gene_id 0 ; sequence GL50803_35753-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 134196 134357 . - . utg47_pilon exonerate:protein2genome:local exon 134196 134357 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 134196 134357 180 - . alignment_id 0 ; Query GL50803_35753-t26_1-p1 ; Align 134358 1 162 utg11_pilon exonerate:protein2genome:local gene 524170 524340 166 - . gene_id 0 ; sequence GL50803_35779-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 524170 524340 . - . utg11_pilon exonerate:protein2genome:local exon 524170 524340 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 524170 524340 166 - . alignment_id 0 ; Query GL50803_35779-t26_1-p1 ; Align 524341 1 171 utg99_pilon exonerate:protein2genome:local gene 370725 371126 598 - . gene_id 0 ; sequence GL50803_3581-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 370725 371126 . - . utg99_pilon exonerate:protein2genome:local exon 370725 371126 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 370725 371126 598 - . alignment_id 0 ; Query GL50803_3581-t26_1-p1 ; Align 371127 1 402 utg308_pilon exonerate:protein2genome:local gene 435429 435527 116 + . gene_id 0 ; sequence GL50803_35811-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 435429 435527 . + . utg308_pilon exonerate:protein2genome:local exon 435429 435527 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 435429 435527 116 + . alignment_id 0 ; Query GL50803_35811-t26_1-p1 ; Align 435429 1 99 utg308_pilon exonerate:protein2genome:local gene 491339 491653 245 + . gene_id 0 ; sequence GL50803_35816-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 491339 491653 . + . utg308_pilon exonerate:protein2genome:local exon 491339 491653 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 491339 491653 245 + . alignment_id 0 ; Query GL50803_35816-t26_1-p1 ; Align 491339 1 315 utg308_pilon exonerate:protein2genome:local gene 496820 496924 125 + . gene_id 0 ; sequence GL50803_35818-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 496820 496924 . + . utg308_pilon exonerate:protein2genome:local exon 496820 496924 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 496820 496924 125 + . alignment_id 0 ; Query GL50803_35818-t26_1-p1 ; Align 496820 1 105 utg99_pilon exonerate:protein2genome:local gene 371182 372267 1671 - . gene_id 0 ; sequence GL50803_3582-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 371182 372267 . - . utg99_pilon exonerate:protein2genome:local exon 371182 372267 . - . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 371182 372267 1671 - . alignment_id 0 ; Query GL50803_3582-t26_1-p1 ; Align 372268 1 543 ; Align 371722 182 540 utg308_pilon exonerate:protein2genome:local gene 501299 501394 101 + . gene_id 0 ; sequence GL50803_35831-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 501299 501394 . + . utg308_pilon exonerate:protein2genome:local exon 501299 501394 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 501299 501394 101 + . alignment_id 0 ; Query GL50803_35831-t26_1-p1 ; Align 501299 1 96 utg308_pilon exonerate:protein2genome:local gene 513940 514182 154 + . gene_id 0 ; sequence GL50803_35833-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 513940 514182 . + . utg308_pilon exonerate:protein2genome:local exon 513940 514182 . + . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 513940 514182 154 + . alignment_id 0 ; Query GL50803_35833-t26_1-p1 ; Align 513940 1 102 ; Align 514042 37 141 utg349_pilon exonerate:protein2genome:local gene 1414823 1414909 110 - . gene_id 0 ; sequence GL50803_35855-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1414823 1414909 . - . utg349_pilon exonerate:protein2genome:local exon 1414823 1414909 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1414823 1414909 110 - . alignment_id 0 ; Query GL50803_35855-t26_1-p1 ; Align 1414910 1 87 utg47_pilon exonerate:protein2genome:local gene 1262905 1263174 343 - . gene_id 0 ; sequence GL50803_35885-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1262905 1263174 . - . utg47_pilon exonerate:protein2genome:local exon 1262905 1263174 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1262905 1263174 343 - . alignment_id 0 ; Query GL50803_35885-t26_1-p1 ; Align 1263175 1 270 utg11_pilon exonerate:protein2genome:local gene 532747 533754 1496 + . gene_id 0 ; sequence GL50803_3589-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 532747 533754 . + . utg11_pilon exonerate:protein2genome:local exon 532747 533754 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 532747 533754 1496 + . alignment_id 0 ; Query GL50803_3589-t26_1-p1 ; Align 532747 1 1008 utg47_pilon exonerate:protein2genome:local gene 1333346 1333609 186 + . gene_id 0 ; sequence GL50803_35890-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1333346 1333609 . + . utg47_pilon exonerate:protein2genome:local exon 1333346 1333609 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1333346 1333609 186 + . alignment_id 0 ; Query GL50803_35890-t26_1-p1 ; Align 1333346 1 264 utg11_pilon exonerate:protein2genome:local gene 533777 534094 496 - . gene_id 0 ; sequence GL50803_3590-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 533777 534094 . - . utg11_pilon exonerate:protein2genome:local exon 533777 534094 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 533777 534094 496 - . alignment_id 0 ; Query GL50803_3590-t26_1-p1 ; Align 534095 1 318 utg47_pilon exonerate:protein2genome:local gene 1287690 1287872 165 + . gene_id 0 ; sequence GL50803_35901-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1287690 1287872 . + . utg47_pilon exonerate:protein2genome:local exon 1287690 1287872 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1287690 1287872 165 + . alignment_id 0 ; Query GL50803_35901-t26_1-p1 ; Align 1287690 1 183 utg47_pilon exonerate:protein2genome:local gene 1293568 1293702 100 + . gene_id 0 ; sequence GL50803_35902-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1293568 1293702 . + . utg47_pilon exonerate:protein2genome:local exon 1293568 1293702 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1293568 1293702 100 + . alignment_id 0 ; Query GL50803_35902-t26_1-p1 ; Align 1293568 1 135 utg47_pilon exonerate:protein2genome:local gene 1236741 1236887 113 - . gene_id 0 ; sequence GL50803_35910-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1236741 1236887 . - . utg47_pilon exonerate:protein2genome:local exon 1236741 1236887 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1236741 1236887 113 - . alignment_id 0 ; Query GL50803_35910-t26_1-p1 ; Align 1236888 2 147 utg349_pilon exonerate:protein2genome:local gene 513736 513843 117 - . gene_id 0 ; sequence GL50803_35919-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 513736 513843 . - . utg349_pilon exonerate:protein2genome:local exon 513736 513843 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 513736 513843 117 - . alignment_id 0 ; Query GL50803_35919-t26_1-p1 ; Align 513844 17 108 utg731_pilon exonerate:protein2genome:local gene 259691 260909 1999 - . gene_id 0 ; sequence GL50803_3593-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 259691 260909 . - . utg731_pilon exonerate:protein2genome:local exon 259691 260909 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 259691 260909 1999 - . alignment_id 0 ; Query GL50803_3593-t26_1-p1 ; Align 260910 1 984 ; Align 259925 329 234 utg349_pilon exonerate:protein2genome:local gene 523674 524279 526 - . gene_id 0 ; sequence GL50803_35934-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 523674 524279 . - . utg349_pilon exonerate:protein2genome:local exon 523674 524279 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 523674 524279 526 - . alignment_id 0 ; Query GL50803_35934-t26_1-p1 ; Align 524280 1 606 utg349_pilon exonerate:protein2genome:local gene 520779 520889 102 - . gene_id 0 ; sequence GL50803_35935-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 520779 520889 . - . utg349_pilon exonerate:protein2genome:local exon 520779 520889 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 520779 520889 102 - . alignment_id 0 ; Query GL50803_35935-t26_1-p1 ; Align 520890 1 111 utg731_pilon exonerate:protein2genome:local gene 257587 259528 2738 - . gene_id 0 ; sequence GL50803_3594-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 258228 259528 . - . utg731_pilon exonerate:protein2genome:local exon 258228 259528 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local splice5 258226 258227 . - . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 258192 258227 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 258192 258193 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 257587 258191 . - . utg731_pilon exonerate:protein2genome:local exon 257587 258191 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 257587 259528 2738 - . alignment_id 0 ; Query GL50803_3594-t26_1-p1 ; Align 259529 1 129 ; Align 259399 44 1170 ; Align 258190 435 603 utg265_pilon exonerate:protein2genome:local gene 636857 637030 140 - . gene_id 0 ; sequence GL50803_35947-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 636857 637030 . - . utg265_pilon exonerate:protein2genome:local exon 636857 637030 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 636857 637030 140 - . alignment_id 0 ; Query GL50803_35947-t26_1-p1 ; Align 637031 1 174 utg731_pilon exonerate:protein2genome:local gene 256601 257563 1490 + . gene_id 0 ; sequence GL50803_3595-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 256601 257563 . + . utg731_pilon exonerate:protein2genome:local exon 256601 257563 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 256601 257563 1490 + . alignment_id 0 ; Query GL50803_3595-t26_1-p1 ; Align 256601 1 873 ; Align 257474 294 90 utg265_pilon exonerate:protein2genome:local gene 651777 651977 166 - . gene_id 0 ; sequence GL50803_35953-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 651777 651977 . - . utg265_pilon exonerate:protein2genome:local exon 651777 651977 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 651777 651977 166 - . alignment_id 0 ; Query GL50803_35953-t26_1-p1 ; Align 651978 1 201 utg265_pilon exonerate:protein2genome:local gene 625923 626036 120 - . gene_id 0 ; sequence GL50803_35969-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 625923 626036 . - . utg265_pilon exonerate:protein2genome:local exon 625923 626036 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 625923 626036 120 - . alignment_id 0 ; Query GL50803_35969-t26_1-p1 ; Align 626037 1 114 utg265_pilon exonerate:protein2genome:local gene 603376 603474 103 - . gene_id 0 ; sequence GL50803_35976-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 603376 603474 . - . utg265_pilon exonerate:protein2genome:local exon 603376 603474 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 603376 603474 103 - . alignment_id 0 ; Query GL50803_35976-t26_1-p1 ; Align 603475 1 99 utg64_pilon exonerate:protein2genome:local gene 756555 757106 870 - . gene_id 0 ; sequence GL50803_3598-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 756555 757106 . - . utg64_pilon exonerate:protein2genome:local exon 756555 757106 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 756555 757106 870 - . alignment_id 0 ; Query GL50803_3598-t26_1-p1 ; Align 757107 1 552 utg265_pilon exonerate:protein2genome:local gene 561402 561644 204 + . gene_id 0 ; sequence GL50803_35981-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 561402 561644 . + . utg265_pilon exonerate:protein2genome:local exon 561402 561644 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 561402 561644 204 + . alignment_id 0 ; Query GL50803_35981-t26_1-p1 ; Align 561402 1 243 utg265_pilon exonerate:protein2genome:local gene 566313 566579 239 + . gene_id 0 ; sequence GL50803_35982-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 566313 566579 . + . utg265_pilon exonerate:protein2genome:local exon 566313 566579 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 566313 566579 239 + . alignment_id 0 ; Query GL50803_35982-t26_1-p1 ; Align 566313 1 267 utg349_pilon exonerate:protein2genome:local gene 1316961 1396505 148 + . gene_id 0 ; sequence GL50803_35985-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1316961 1317107 . + . utg349_pilon exonerate:protein2genome:local exon 1316961 1317107 . + . insertions 6 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1317108 1317109 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1317108 1396442 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1396441 1396442 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1396443 1396505 . + . utg349_pilon exonerate:protein2genome:local exon 1396443 1396505 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1316961 1396505 148 + . alignment_id 0 ; Query GL50803_35985-t26_1-p1 ; Align 1316961 3 105 ; Align 1317069 38 36 ; Align 1396443 50 63 utg11_pilon exonerate:protein2genome:local gene 185322 185492 222 + . gene_id 0 ; sequence GL50803_35986-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 185322 185492 . + . utg11_pilon exonerate:protein2genome:local exon 185322 185492 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 185322 185492 222 + . alignment_id 0 ; Query GL50803_35986-t26_1-p1 ; Align 185322 1 171 utg64_pilon exonerate:protein2genome:local gene 757054 758226 1528 + . gene_id 0 ; sequence GL50803_3599-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 757054 758226 . + . utg64_pilon exonerate:protein2genome:local exon 757054 758226 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 757054 758226 1528 + . alignment_id 0 ; Query GL50803_3599-t26_1-p1 ; Align 757054 1 1173 utg11_pilon exonerate:protein2genome:local gene 210652 210930 255 + . gene_id 0 ; sequence GL50803_35993-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 210652 210930 . + . utg11_pilon exonerate:protein2genome:local exon 210652 210930 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 210652 210930 255 + . alignment_id 0 ; Query GL50803_35993-t26_1-p1 ; Align 210652 1 54 ; Align 210706 21 225 utg11_pilon exonerate:protein2genome:local gene 174936 175130 208 + . gene_id 0 ; sequence GL50803_35998-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 174936 175130 . + . utg11_pilon exonerate:protein2genome:local exon 174936 175130 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 174936 175130 208 + . alignment_id 0 ; Query GL50803_35998-t26_1-p1 ; Align 174936 1 195 utg11_pilon exonerate:protein2genome:local gene 180380 180556 149 + . gene_id 0 ; sequence GL50803_35999-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 180380 180556 . + . utg11_pilon exonerate:protein2genome:local exon 180380 180556 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 180380 180556 149 + . alignment_id 0 ; Query GL50803_35999-t26_1-p1 ; Align 180380 1 177 utg11_pilon exonerate:protein2genome:local gene 173127 173414 262 + . gene_id 0 ; sequence GL50803_36009-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 173127 173414 . + . utg11_pilon exonerate:protein2genome:local exon 173127 173414 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 173127 173414 262 + . alignment_id 0 ; Query GL50803_36009-t26_1-p1 ; Align 173127 1 288 utg11_pilon exonerate:protein2genome:local gene 412369 412515 135 - . gene_id 0 ; sequence GL50803_36018-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 412369 412515 . - . utg11_pilon exonerate:protein2genome:local exon 412369 412515 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 412369 412515 135 - . alignment_id 0 ; Query GL50803_36018-t26_1-p1 ; Align 412516 1 147 utg11_pilon exonerate:protein2genome:local gene 295248 295517 404 + . gene_id 0 ; sequence GL50803_36036-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 295248 295517 . + . utg11_pilon exonerate:protein2genome:local exon 295248 295517 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 295248 295517 404 + . alignment_id 0 ; Query GL50803_36036-t26_1-p1 ; Align 295248 1 270 utg11_pilon exonerate:protein2genome:local gene 307785 308304 471 + . gene_id 0 ; sequence GL50803_36039-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 307785 308304 . + . utg11_pilon exonerate:protein2genome:local exon 307785 308304 . + . insertions 3 ; deletions 0 ; frameshifts 4 utg11_pilon exonerate:protein2genome:local similarity 307785 308304 471 + . alignment_id 0 ; Query GL50803_36039-t26_1-p1 ; Align 307785 1 360 ; Align 308148 121 42 ; Align 308194 135 111 utg11_pilon exonerate:protein2genome:local gene 316243 316347 124 + . gene_id 0 ; sequence GL50803_36041-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 316243 316347 . + . utg11_pilon exonerate:protein2genome:local exon 316243 316347 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 316243 316347 124 + . alignment_id 0 ; Query GL50803_36041-t26_1-p1 ; Align 316243 1 105 utg11_pilon exonerate:protein2genome:local gene 350524 350691 206 + . gene_id 0 ; sequence GL50803_36044-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 350524 350691 . + . utg11_pilon exonerate:protein2genome:local exon 350524 350691 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 350524 350691 206 + . alignment_id 0 ; Query GL50803_36044-t26_1-p1 ; Align 350524 1 168 utg11_pilon exonerate:protein2genome:local gene 353070 353174 112 + . gene_id 0 ; sequence GL50803_36045-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 353070 353174 . + . utg11_pilon exonerate:protein2genome:local exon 353070 353174 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 353070 353174 112 + . alignment_id 0 ; Query GL50803_36045-t26_1-p1 ; Align 353070 1 105 utg11_pilon exonerate:protein2genome:local gene 295388 295504 126 + . gene_id 0 ; sequence GL50803_36061-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 295388 295504 . + . utg11_pilon exonerate:protein2genome:local exon 295388 295504 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 295388 295504 126 + . alignment_id 0 ; Query GL50803_36061-t26_1-p1 ; Align 295388 1 117 utg11_pilon exonerate:protein2genome:local gene 301049 301183 120 + . gene_id 0 ; sequence GL50803_36063-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 301049 301183 . + . utg11_pilon exonerate:protein2genome:local exon 301049 301183 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 301049 301183 120 + . alignment_id 0 ; Query GL50803_36063-t26_1-p1 ; Align 301049 1 135 utg11_pilon exonerate:protein2genome:local gene 346837 346974 125 + . gene_id 0 ; sequence GL50803_36066-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 346837 346974 . + . utg11_pilon exonerate:protein2genome:local exon 346837 346974 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 346837 346974 125 + . alignment_id 0 ; Query GL50803_36066-t26_1-p1 ; Align 346837 1 138 utg11_pilon exonerate:protein2genome:local gene 351264 351904 580 + . gene_id 0 ; sequence GL50803_36068-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 351264 351904 . + . utg11_pilon exonerate:protein2genome:local exon 351264 351904 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 351264 351904 580 + . alignment_id 0 ; Query GL50803_36068-t26_1-p1 ; Align 351264 1 423 ; Align 351688 142 39 ; Align 351728 155 177 utg11_pilon exonerate:protein2genome:local gene 352177 352536 602 + . gene_id 0 ; sequence GL50803_36069-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 352177 352536 . + . utg11_pilon exonerate:protein2genome:local exon 352177 352536 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 352177 352536 602 + . alignment_id 0 ; Query GL50803_36069-t26_1-p1 ; Align 352177 1 360 utg11_pilon exonerate:protein2genome:local gene 362691 362807 163 + . gene_id 0 ; sequence GL50803_36072-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 362691 362807 . + . utg11_pilon exonerate:protein2genome:local exon 362691 362807 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 362691 362807 163 + . alignment_id 0 ; Query GL50803_36072-t26_1-p1 ; Align 362691 6 117 utg11_pilon exonerate:protein2genome:local gene 372217 372387 151 + . gene_id 0 ; sequence GL50803_36076-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 372217 372387 . + . utg11_pilon exonerate:protein2genome:local exon 372217 372387 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 372217 372387 151 + . alignment_id 0 ; Query GL50803_36076-t26_1-p1 ; Align 372217 5 171 utg11_pilon exonerate:protein2genome:local gene 595672 595767 106 + . gene_id 0 ; sequence GL50803_36087-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 595672 595767 . + . utg11_pilon exonerate:protein2genome:local exon 595672 595767 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 595672 595767 106 + . alignment_id 0 ; Query GL50803_36087-t26_1-p1 ; Align 595672 1 96 utg99_pilon exonerate:protein2genome:local gene 329845 329979 141 + . gene_id 0 ; sequence GL50803_3610-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 329845 329979 . + . utg99_pilon exonerate:protein2genome:local exon 329845 329979 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 329845 329979 141 + . alignment_id 0 ; Query GL50803_3610-t26_1-p1 ; Align 329845 1 135 utg212_pilon exonerate:protein2genome:local gene 150794 150928 141 - . gene_id 0 ; sequence GL50803_3610-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 150794 150928 . - . utg212_pilon exonerate:protein2genome:local exon 150794 150928 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 150794 150928 141 - . alignment_id 0 ; Query GL50803_3610-t26_1-p1 ; Align 150929 1 135 utg11_pilon exonerate:protein2genome:local gene 635539 635697 165 + . gene_id 0 ; sequence GL50803_36102-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 635539 635697 . + . utg11_pilon exonerate:protein2genome:local exon 635539 635697 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 635539 635697 165 + . alignment_id 0 ; Query GL50803_36102-t26_1-p1 ; Align 635539 5 159 utg11_pilon exonerate:protein2genome:local gene 577853 578140 302 + . gene_id 0 ; sequence GL50803_36107-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 577853 578140 . + . utg11_pilon exonerate:protein2genome:local exon 577853 578140 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 577853 578140 302 + . alignment_id 0 ; Query GL50803_36107-t26_1-p1 ; Align 577853 1 288 utg11_pilon exonerate:protein2genome:local gene 604948 605307 334 + . gene_id 0 ; sequence GL50803_36117-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 604948 605307 . + . utg11_pilon exonerate:protein2genome:local exon 604948 605307 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 604948 605307 334 + . alignment_id 0 ; Query GL50803_36117-t26_1-p1 ; Align 604948 1 360 utg11_pilon exonerate:protein2genome:local gene 622296 622433 126 + . gene_id 0 ; sequence GL50803_36122-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 622296 622433 . + . utg11_pilon exonerate:protein2genome:local exon 622296 622433 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 622296 622433 126 + . alignment_id 0 ; Query GL50803_36122-t26_1-p1 ; Align 622296 2 138 utg731_pilon exonerate:protein2genome:local gene 1572403 1572723 274 + . gene_id 0 ; sequence GL50803_36147-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1572403 1572723 . + . utg731_pilon exonerate:protein2genome:local exon 1572403 1572723 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1572403 1572723 274 + . alignment_id 0 ; Query GL50803_36147-t26_1-p1 ; Align 1572403 1 321 utg731_pilon exonerate:protein2genome:local gene 1459678 1459974 208 - . gene_id 0 ; sequence GL50803_36168-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1459678 1459974 . - . utg731_pilon exonerate:protein2genome:local exon 1459678 1459974 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1459678 1459974 208 - . alignment_id 0 ; Query GL50803_36168-t26_1-p1 ; Align 1459975 1 297 utg731_pilon exonerate:protein2genome:local gene 1436823 1436939 163 - . gene_id 0 ; sequence GL50803_36176-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1436823 1436939 . - . utg731_pilon exonerate:protein2genome:local exon 1436823 1436939 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1436823 1436939 163 - . alignment_id 0 ; Query GL50803_36176-t26_1-p1 ; Align 1436940 1 117 utg731_pilon exonerate:protein2genome:local gene 1435074 1435223 140 - . gene_id 0 ; sequence GL50803_36178-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1435074 1435223 . - . utg731_pilon exonerate:protein2genome:local exon 1435074 1435223 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1435074 1435223 140 - . alignment_id 0 ; Query GL50803_36178-t26_1-p1 ; Align 1435224 1 150 utg47_pilon exonerate:protein2genome:local gene 1773346 1773894 445 + . gene_id 0 ; sequence GL50803_36235-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1773346 1773894 . + . utg47_pilon exonerate:protein2genome:local exon 1773346 1773894 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1773346 1773894 445 + . alignment_id 0 ; Query GL50803_36235-t26_1-p1 ; Align 1773346 1 51 ; Align 1773397 19 498 utg47_pilon exonerate:protein2genome:local gene 1757974 1758192 283 + . gene_id 0 ; sequence GL50803_36247-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1757974 1758192 . + . utg47_pilon exonerate:protein2genome:local exon 1757974 1758192 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1757974 1758192 283 + . alignment_id 0 ; Query GL50803_36247-t26_1-p1 ; Align 1757974 2 219 utg349_pilon exonerate:protein2genome:local gene 204187 204390 178 + . gene_id 0 ; sequence GL50803_36282-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 204187 204390 . + . utg349_pilon exonerate:protein2genome:local exon 204187 204390 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 204187 204390 178 + . alignment_id 0 ; Query GL50803_36282-t26_1-p1 ; Align 204187 1 204 utg16500_pilon exonerate:protein2genome:local gene 20859 21350 457 + . gene_id 0 ; sequence GL50803_36307-t26_1-p1 ; gene_orientation . utg16500_pilon exonerate:protein2genome:local cds 20859 21350 . + . utg16500_pilon exonerate:protein2genome:local exon 20859 21350 . + . insertions 0 ; deletions 0 utg16500_pilon exonerate:protein2genome:local similarity 20859 21350 457 + . alignment_id 0 ; Query GL50803_36307-t26_1-p1 ; Align 20859 6 492 utg47_pilon exonerate:protein2genome:local gene 25444 25800 560 - . gene_id 0 ; sequence GL50803_36315-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 25444 25800 . - . utg47_pilon exonerate:protein2genome:local exon 25444 25800 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 25444 25800 560 - . alignment_id 0 ; Query GL50803_36315-t26_1-p1 ; Align 25801 1 357 utg364_pilon exonerate:protein2genome:local gene 35292 35648 560 + . gene_id 0 ; sequence GL50803_36315-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 35292 35648 . + . utg364_pilon exonerate:protein2genome:local exon 35292 35648 . + . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 35292 35648 560 + . alignment_id 0 ; Query GL50803_36315-t26_1-p1 ; Align 35292 1 357 utg364_pilon exonerate:protein2genome:local gene 51167 51523 560 + . gene_id 0 ; sequence GL50803_36315-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 51167 51523 . + . utg364_pilon exonerate:protein2genome:local exon 51167 51523 . + . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 51167 51523 560 + . alignment_id 0 ; Query GL50803_36315-t26_1-p1 ; Align 51167 1 357 utg265_pilon exonerate:protein2genome:local gene 875836 875973 121 - . gene_id 0 ; sequence GL50803_36333-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 875836 875973 . - . utg265_pilon exonerate:protein2genome:local exon 875836 875973 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 875836 875973 121 - . alignment_id 0 ; Query GL50803_36333-t26_1-p1 ; Align 875974 1 138 utg265_pilon exonerate:protein2genome:local gene 853152 853412 158 + . gene_id 0 ; sequence GL50803_36343-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 853152 853412 . + . utg265_pilon exonerate:protein2genome:local exon 853152 853412 . + . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 853152 853412 158 + . alignment_id 0 ; Query GL50803_36343-t26_1-p1 ; Align 853152 1 195 ; Align 853347 67 66 utg308_pilon exonerate:protein2genome:local gene 24197 24915 685 + . gene_id 0 ; sequence GL50803_3635-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 24197 24915 . + . utg308_pilon exonerate:protein2genome:local exon 24197 24915 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 24197 24915 685 + . alignment_id 0 ; Query GL50803_3635-t26_1-p1 ; Align 24197 1 135 ; Align 24334 46 168 ; Align 24502 103 414 utg265_pilon exonerate:protein2genome:local gene 788945 789136 156 + . gene_id 0 ; sequence GL50803_36351-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 788945 789136 . + . utg265_pilon exonerate:protein2genome:local exon 788945 789136 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 788945 789136 156 + . alignment_id 0 ; Query GL50803_36351-t26_1-p1 ; Align 788945 4 192 utg349_pilon exonerate:protein2genome:local gene 82361 82600 120 - . gene_id 0 ; sequence GL50803_36352-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 82361 82600 . - . utg349_pilon exonerate:protein2genome:local exon 82361 82600 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 82361 82600 120 - . alignment_id 0 ; Query GL50803_36352-t26_1-p1 ; Align 82601 3 240 utg308_pilon exonerate:protein2genome:local gene 24938 25339 593 + . gene_id 0 ; sequence GL50803_3636-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 24938 25339 . + . utg308_pilon exonerate:protein2genome:local exon 24938 25339 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 24938 25339 593 + . alignment_id 0 ; Query GL50803_3636-t26_1-p1 ; Align 24938 1 402 utg47_pilon exonerate:protein2genome:local gene 278113 278277 156 - . gene_id 0 ; sequence GL50803_36383-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 278113 278277 . - . utg47_pilon exonerate:protein2genome:local exon 278113 278277 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 278113 278277 156 - . alignment_id 0 ; Query GL50803_36383-t26_1-p1 ; Align 278278 3 165 utg47_pilon exonerate:protein2genome:local gene 286828 286938 109 - . gene_id 0 ; sequence GL50803_36386-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 286828 286938 . - . utg47_pilon exonerate:protein2genome:local exon 286828 286938 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 286828 286938 109 - . alignment_id 0 ; Query GL50803_36386-t26_1-p1 ; Align 286939 1 111 utg99_pilon exonerate:protein2genome:local gene 175002 175166 204 + . gene_id 0 ; sequence GL50803_36400-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 175002 175166 . + . utg99_pilon exonerate:protein2genome:local exon 175002 175166 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 175002 175166 204 + . alignment_id 0 ; Query GL50803_36400-t26_1-p1 ; Align 175002 31 165 utg99_pilon exonerate:protein2genome:local gene 166913 167129 235 + . gene_id 0 ; sequence GL50803_36410-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 166913 167129 . + . utg99_pilon exonerate:protein2genome:local exon 166913 167129 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg99_pilon exonerate:protein2genome:local similarity 166913 167129 235 + . alignment_id 0 ; Query GL50803_36410-t26_1-p1 ; Align 166913 1 162 ; Align 167076 55 54 utg99_pilon exonerate:protein2genome:local gene 173845 174030 176 + . gene_id 0 ; sequence GL50803_36413-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 173845 174030 . + . utg99_pilon exonerate:protein2genome:local exon 173845 174030 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 173845 174030 176 + . alignment_id 0 ; Query GL50803_36413-t26_1-p1 ; Align 173845 8 186 utg212_pilon exonerate:protein2genome:local gene 128207 130186 2718 - . gene_id 0 ; sequence GL50803_36426-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 128207 130186 . - . utg212_pilon exonerate:protein2genome:local exon 128207 130186 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 128207 130186 2718 - . alignment_id 0 ; Query GL50803_36426-t26_1-p1 ; Align 130187 1 1980 utg11_pilon exonerate:protein2genome:local gene 1525956 1526969 1688 + . gene_id 0 ; sequence GL50803_3643-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1525956 1526969 . + . utg11_pilon exonerate:protein2genome:local exon 1525956 1526969 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1525956 1526969 1688 + . alignment_id 0 ; Query GL50803_3643-t26_1-p1 ; Align 1525956 1 1014 utg212_pilon exonerate:protein2genome:local gene 148765 148935 201 - . gene_id 0 ; sequence GL50803_36433-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 148765 148935 . - . utg212_pilon exonerate:protein2genome:local exon 148765 148935 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 148765 148935 201 - . alignment_id 0 ; Query GL50803_36433-t26_1-p1 ; Align 148936 1 171 utg47_pilon exonerate:protein2genome:local gene 666303 668408 2014 - . gene_id 0 ; sequence GL50803_3647-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 666303 668408 . - . utg47_pilon exonerate:protein2genome:local exon 666303 668408 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 666303 668408 2014 - . alignment_id 0 ; Query GL50803_3647-t26_1-p1 ; Align 668409 1 864 ; Align 667542 289 1239 utg47_pilon exonerate:protein2genome:local gene 291036 291326 214 - . gene_id 0 ; sequence GL50803_36477-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 291036 291326 . - . utg47_pilon exonerate:protein2genome:local exon 291036 291326 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 291036 291326 214 - . alignment_id 0 ; Query GL50803_36477-t26_1-p1 ; Align 291327 1 255 ; Align 291072 87 36 utg308_pilon exonerate:protein2genome:local gene 801100 801240 111 - . gene_id 0 ; sequence GL50803_36486-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 801100 801240 . - . utg308_pilon exonerate:protein2genome:local exon 801100 801240 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 801100 801240 111 - . alignment_id 0 ; Query GL50803_36486-t26_1-p1 ; Align 801241 1 141 utg212_pilon exonerate:protein2genome:local gene 14045 115880 638 + . gene_id 0 ; sequence GL50803_36493-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14045 14352 . + . utg212_pilon exonerate:protein2genome:local exon 14045 14352 . + . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local splice5 14353 14354 . + . intron_id 1 ; splice_site "GT" utg212_pilon exonerate:protein2genome:local intron 14353 56874 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 56873 56874 . + . intron_id 0 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local cds 56875 57005 . + . utg212_pilon exonerate:protein2genome:local exon 56875 57005 . + . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 57006 57007 . + . intron_id 2 ; splice_site "AT" utg212_pilon exonerate:protein2genome:local intron 57006 115737 . + . intron_id 2 utg212_pilon exonerate:protein2genome:local splice3 115736 115737 . + . intron_id 1 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local cds 115738 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115738 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14045 115880 638 + . alignment_id 0 ; Query GL50803_36493-t26_1-p1 ; Align 14045 1 48 ; Align 14093 18 258 ; Align 56876 105 24 ; Align 56903 113 102 ; Align 115740 148 141 utg18_pilon exonerate:protein2genome:local gene 254088 254189 114 - . gene_id 0 ; sequence GL50803_36514-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 254088 254189 . - . utg18_pilon exonerate:protein2genome:local exon 254088 254189 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 254088 254189 114 - . alignment_id 0 ; Query GL50803_36514-t26_1-p1 ; Align 254190 1 102 utg11_pilon exonerate:protein2genome:local gene 1408653 1412438 5127 - . gene_id 0 ; sequence GL50803_36515-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1408653 1412438 . - . utg11_pilon exonerate:protein2genome:local exon 1408653 1412438 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1408653 1412438 5127 - . alignment_id 0 ; Query GL50803_36515-t26_1-p1 ; Align 1412439 1 3786 utg11_pilon exonerate:protein2genome:local gene 1405396 1405647 220 - . gene_id 0 ; sequence GL50803_36517-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1405396 1405647 . - . utg11_pilon exonerate:protein2genome:local exon 1405396 1405647 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1405396 1405647 220 - . alignment_id 0 ; Query GL50803_36517-t26_1-p1 ; Align 1405648 1 252 utg11_pilon exonerate:protein2genome:local gene 1422737 1422904 167 - . gene_id 0 ; sequence GL50803_36537-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1422737 1422904 . - . utg11_pilon exonerate:protein2genome:local exon 1422737 1422904 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1422737 1422904 167 - . alignment_id 0 ; Query GL50803_36537-t26_1-p1 ; Align 1422905 1 168 utg11_pilon exonerate:protein2genome:local gene 649648 649752 142 - . gene_id 0 ; sequence GL50803_36540-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 649648 649752 . - . utg11_pilon exonerate:protein2genome:local exon 649648 649752 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 649648 649752 142 - . alignment_id 0 ; Query GL50803_36540-t26_1-p1 ; Align 649753 1 105 utg64_pilon exonerate:protein2genome:local gene 368580 368684 142 + . gene_id 0 ; sequence GL50803_36540-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 368580 368684 . + . utg64_pilon exonerate:protein2genome:local exon 368580 368684 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 368580 368684 142 + . alignment_id 0 ; Query GL50803_36540-t26_1-p1 ; Align 368580 1 105 utg64_pilon exonerate:protein2genome:local gene 357569 357673 142 - . gene_id 0 ; sequence GL50803_36540-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 357569 357673 . - . utg64_pilon exonerate:protein2genome:local exon 357569 357673 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 357569 357673 142 - . alignment_id 0 ; Query GL50803_36540-t26_1-p1 ; Align 357674 1 105 utg212_pilon exonerate:protein2genome:local gene 405146 405250 142 + . gene_id 0 ; sequence GL50803_36540-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 405146 405250 . + . utg212_pilon exonerate:protein2genome:local exon 405146 405250 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 405146 405250 142 + . alignment_id 0 ; Query GL50803_36540-t26_1-p1 ; Align 405146 1 105 utg308_pilon exonerate:protein2genome:local gene 825595 825699 142 + . gene_id 0 ; sequence GL50803_36540-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 825595 825699 . + . utg308_pilon exonerate:protein2genome:local exon 825595 825699 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 825595 825699 142 + . alignment_id 0 ; Query GL50803_36540-t26_1-p1 ; Align 825595 1 105 utg349_pilon exonerate:protein2genome:local gene 1439833 1439937 142 - . gene_id 0 ; sequence GL50803_36540-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1439833 1439937 . - . utg349_pilon exonerate:protein2genome:local exon 1439833 1439937 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1439833 1439937 142 - . alignment_id 0 ; Query GL50803_36540-t26_1-p1 ; Align 1439938 1 105 utg731_pilon exonerate:protein2genome:local gene 68444 68548 142 + . gene_id 0 ; sequence GL50803_36540-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 68444 68548 . + . utg731_pilon exonerate:protein2genome:local exon 68444 68548 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 68444 68548 142 + . alignment_id 0 ; Query GL50803_36540-t26_1-p1 ; Align 68444 1 105 utg308_pilon exonerate:protein2genome:local gene 310798 311502 818 + . gene_id 0 ; sequence GL50803_36562-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 310798 311502 . + . utg308_pilon exonerate:protein2genome:local exon 310798 311502 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 310798 311502 818 + . alignment_id 0 ; Query GL50803_36562-t26_1-p1 ; Align 310798 1 330 ; Align 311128 112 375 utg308_pilon exonerate:protein2genome:local gene 352401 352601 168 - . gene_id 0 ; sequence GL50803_36565-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 352401 352601 . - . utg308_pilon exonerate:protein2genome:local exon 352401 352601 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 352401 352601 168 - . alignment_id 0 ; Query GL50803_36565-t26_1-p1 ; Align 352602 2 201 utg308_pilon exonerate:protein2genome:local gene 349013 349543 710 - . gene_id 0 ; sequence GL50803_36567-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 349013 349543 . - . utg308_pilon exonerate:protein2genome:local exon 349013 349543 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 349013 349543 710 - . alignment_id 0 ; Query GL50803_36567-t26_1-p1 ; Align 349544 2 531 utg11_pilon exonerate:protein2genome:local gene 1499747 1499974 223 - . gene_id 0 ; sequence GL50803_36580-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1499747 1499974 . - . utg11_pilon exonerate:protein2genome:local exon 1499747 1499974 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1499747 1499974 223 - . alignment_id 0 ; Query GL50803_36580-t26_1-p1 ; Align 1499975 1 228 utg11_pilon exonerate:protein2genome:local gene 1463296 1463496 280 - . gene_id 0 ; sequence GL50803_36588-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1463296 1463496 . - . utg11_pilon exonerate:protein2genome:local exon 1463296 1463496 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1463296 1463496 280 - . alignment_id 0 ; Query GL50803_36588-t26_1-p1 ; Align 1463497 1 201 utg349_pilon exonerate:protein2genome:local gene 451655 451804 115 - . gene_id 0 ; sequence GL50803_36600-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 451655 451804 . - . utg349_pilon exonerate:protein2genome:local exon 451655 451804 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 451655 451804 115 - . alignment_id 0 ; Query GL50803_36600-t26_1-p1 ; Align 451805 1 150 utg11_pilon exonerate:protein2genome:local gene 1484627 1484749 128 - . gene_id 0 ; sequence GL50803_36602-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1484627 1484749 . - . utg11_pilon exonerate:protein2genome:local exon 1484627 1484749 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1484627 1484749 128 - . alignment_id 0 ; Query GL50803_36602-t26_1-p1 ; Align 1484750 1 123 utg11_pilon exonerate:protein2genome:local gene 1431009 1431287 206 - . gene_id 0 ; sequence GL50803_36612-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1431009 1431287 . - . utg11_pilon exonerate:protein2genome:local exon 1431009 1431287 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1431009 1431287 206 - . alignment_id 0 ; Query GL50803_36612-t26_1-p1 ; Align 1431288 1 279 utg11_pilon exonerate:protein2genome:local gene 1505818 1505967 115 - . gene_id 0 ; sequence GL50803_36613-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1505818 1505967 . - . utg11_pilon exonerate:protein2genome:local exon 1505818 1505967 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1505818 1505967 115 - . alignment_id 0 ; Query GL50803_36613-t26_1-p1 ; Align 1505968 1 150 utg349_pilon exonerate:protein2genome:local gene 1066978 1067202 203 + . gene_id 0 ; sequence GL50803_36645-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1066978 1067202 . + . utg349_pilon exonerate:protein2genome:local exon 1066978 1067202 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1066978 1067202 203 + . alignment_id 0 ; Query GL50803_36645-t26_1-p1 ; Align 1066978 6 225 utg349_pilon exonerate:protein2genome:local gene 1057006 1058880 2669 + . gene_id 0 ; sequence GL50803_36654-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1057006 1058880 . + . utg349_pilon exonerate:protein2genome:local exon 1057006 1058880 . + . insertions 9 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 1057006 1058880 2669 + . alignment_id 0 ; Query GL50803_36654-t26_1-p1 ; Align 1057006 1 855 ; Align 1057870 286 969 ; Align 1058839 611 42 utg265_pilon exonerate:protein2genome:local gene 299300 300277 950 - . gene_id 0 ; sequence GL50803_3666-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 299300 300277 . - . utg265_pilon exonerate:protein2genome:local exon 299300 300277 . - . insertions 0 ; deletions 0 ; frameshifts 6 utg265_pilon exonerate:protein2genome:local similarity 299300 300277 950 - . alignment_id 0 ; Query GL50803_3666-t26_1-p1 ; Align 300278 419 717 ; Align 299559 658 54 ; Align 299501 676 201 utg349_pilon exonerate:protein2genome:local gene 1136096 1136266 197 + . gene_id 0 ; sequence GL50803_36663-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1136096 1136266 . + . utg349_pilon exonerate:protein2genome:local exon 1136096 1136266 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1136096 1136266 197 + . alignment_id 0 ; Query GL50803_36663-t26_1-p1 ; Align 1136096 1 171 utg349_pilon exonerate:protein2genome:local gene 1148533 1148727 226 + . gene_id 0 ; sequence GL50803_36665-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1148533 1148727 . + . utg349_pilon exonerate:protein2genome:local exon 1148533 1148727 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1148533 1148727 226 + . alignment_id 0 ; Query GL50803_36665-t26_1-p1 ; Align 1148533 1 195 utg349_pilon exonerate:protein2genome:local gene 1158100 1158267 158 + . gene_id 0 ; sequence GL50803_36674-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1158100 1158267 . + . utg349_pilon exonerate:protein2genome:local exon 1158100 1158267 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1158100 1158267 158 + . alignment_id 0 ; Query GL50803_36674-t26_1-p1 ; Align 1158100 9 168 utg349_pilon exonerate:protein2genome:local gene 1166204 1166320 109 + . gene_id 0 ; sequence GL50803_36676-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1166204 1166320 . + . utg349_pilon exonerate:protein2genome:local exon 1166204 1166320 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1166204 1166320 109 + . alignment_id 0 ; Query GL50803_36676-t26_1-p1 ; Align 1166204 1 117 utg349_pilon exonerate:protein2genome:local gene 1095368 1095484 119 + . gene_id 0 ; sequence GL50803_36677-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1095368 1095484 . + . utg349_pilon exonerate:protein2genome:local exon 1095368 1095484 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1095368 1095484 119 + . alignment_id 0 ; Query GL50803_36677-t26_1-p1 ; Align 1095368 3 117 utg349_pilon exonerate:protein2genome:local gene 1097454 1097759 208 + . gene_id 0 ; sequence GL50803_36693-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1097454 1097759 . + . utg349_pilon exonerate:protein2genome:local exon 1097454 1097759 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1097454 1097759 208 + . alignment_id 0 ; Query GL50803_36693-t26_1-p1 ; Align 1097454 1 306 utg349_pilon exonerate:protein2genome:local gene 1153594 1153731 103 + . gene_id 0 ; sequence GL50803_36695-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1153594 1153731 . + . utg349_pilon exonerate:protein2genome:local exon 1153594 1153731 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1153594 1153731 103 + . alignment_id 0 ; Query GL50803_36695-t26_1-p1 ; Align 1153594 1 138 utg349_pilon exonerate:protein2genome:local gene 1175018 1175239 208 + . gene_id 0 ; sequence GL50803_36698-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1175018 1175239 . + . utg349_pilon exonerate:protein2genome:local exon 1175018 1175239 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1175018 1175239 208 + . alignment_id 0 ; Query GL50803_36698-t26_1-p1 ; Align 1175018 4 222 utg349_pilon exonerate:protein2genome:local gene 1177701 1177853 203 + . gene_id 0 ; sequence GL50803_36699-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1177701 1177853 . + . utg349_pilon exonerate:protein2genome:local exon 1177701 1177853 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1177701 1177853 203 + . alignment_id 0 ; Query GL50803_36699-t26_1-p1 ; Align 1177701 1 153 utg47_pilon exonerate:protein2genome:local gene 53279 53437 145 - . gene_id 0 ; sequence GL50803_36704-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 53279 53437 . - . utg47_pilon exonerate:protein2genome:local exon 53279 53437 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 53279 53437 145 - . alignment_id 0 ; Query GL50803_36704-t26_1-p1 ; Align 53438 1 159 utg364_pilon exonerate:protein2genome:local gene 12393 12551 145 + . gene_id 0 ; sequence GL50803_36704-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 12393 12551 . + . utg364_pilon exonerate:protein2genome:local exon 12393 12551 . + . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 12393 12551 145 + . alignment_id 0 ; Query GL50803_36704-t26_1-p1 ; Align 12393 1 159 utg11_pilon exonerate:protein2genome:local gene 1713126 1713242 129 - . gene_id 0 ; sequence GL50803_36743-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1713126 1713242 . - . utg11_pilon exonerate:protein2genome:local exon 1713126 1713242 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1713126 1713242 129 - . alignment_id 0 ; Query GL50803_36743-t26_1-p1 ; Align 1713243 1 117 utg11_pilon exonerate:protein2genome:local gene 1664290 1664445 161 - . gene_id 0 ; sequence GL50803_36750-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1664290 1664445 . - . utg11_pilon exonerate:protein2genome:local exon 1664290 1664445 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1664290 1664445 161 - . alignment_id 0 ; Query GL50803_36750-t26_1-p1 ; Align 1664446 1 156 utg11_pilon exonerate:protein2genome:local gene 1663120 1663299 194 - . gene_id 0 ; sequence GL50803_36751-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1663120 1663299 . - . utg11_pilon exonerate:protein2genome:local exon 1663120 1663299 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1663120 1663299 194 - . alignment_id 0 ; Query GL50803_36751-t26_1-p1 ; Align 1663300 1 180 utg11_pilon exonerate:protein2genome:local gene 1724140 1724301 200 - . gene_id 0 ; sequence GL50803_36755-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1724140 1724301 . - . utg11_pilon exonerate:protein2genome:local exon 1724140 1724301 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1724140 1724301 200 - . alignment_id 0 ; Query GL50803_36755-t26_1-p1 ; Align 1724302 1 162 utg11_pilon exonerate:protein2genome:local gene 1698312 1698455 168 - . gene_id 0 ; sequence GL50803_36756-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1698312 1698455 . - . utg11_pilon exonerate:protein2genome:local exon 1698312 1698455 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1698312 1698455 168 - . alignment_id 0 ; Query GL50803_36756-t26_1-p1 ; Align 1698456 1 144 utg11_pilon exonerate:protein2genome:local gene 1662273 1662398 124 - . gene_id 0 ; sequence GL50803_36762-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1662273 1662398 . - . utg11_pilon exonerate:protein2genome:local exon 1662273 1662398 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1662273 1662398 124 - . alignment_id 0 ; Query GL50803_36762-t26_1-p1 ; Align 1662399 1 126 utg11_pilon exonerate:protein2genome:local gene 1641905 1642156 220 - . gene_id 0 ; sequence GL50803_36766-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1641905 1642156 . - . utg11_pilon exonerate:protein2genome:local exon 1641905 1642156 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1641905 1642156 220 - . alignment_id 0 ; Query GL50803_36766-t26_1-p1 ; Align 1642157 1 252 utg212_pilon exonerate:protein2genome:local gene 61364 63874 3122 + . gene_id 0 ; sequence GL50803_3677-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 61364 63874 . + . utg212_pilon exonerate:protein2genome:local exon 61364 63874 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 61364 63874 3122 + . alignment_id 0 ; Query GL50803_3677-t26_1-p1 ; Align 61364 1 2511 utg212_pilon exonerate:protein2genome:local gene 64239 65042 1277 + . gene_id 0 ; sequence GL50803_3678-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 64239 65042 . + . utg212_pilon exonerate:protein2genome:local exon 64239 65042 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 64239 65042 1277 + . alignment_id 0 ; Query GL50803_3678-t26_1-p1 ; Align 64239 1 804 utg349_pilon exonerate:protein2genome:local gene 1588626 1590560 2326 + . gene_id 0 ; sequence GL50803_36783-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1588626 1590560 . + . utg349_pilon exonerate:protein2genome:local exon 1588626 1590560 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1588626 1590560 2326 + . alignment_id 0 ; Query GL50803_36783-t26_1-p1 ; Align 1588626 1 1935 utg212_pilon exonerate:protein2genome:local gene 65366 65629 330 - . gene_id 0 ; sequence GL50803_3679-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 65366 65629 . - . utg212_pilon exonerate:protein2genome:local exon 65366 65629 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 65366 65629 330 - . alignment_id 0 ; Query GL50803_3679-t26_1-p1 ; Align 65630 1 264 utg349_pilon exonerate:protein2genome:local gene 1573858 1573998 209 + . gene_id 0 ; sequence GL50803_36798-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1573858 1573998 . + . utg349_pilon exonerate:protein2genome:local exon 1573858 1573998 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1573858 1573998 209 + . alignment_id 0 ; Query GL50803_36798-t26_1-p1 ; Align 1573858 1 141 utg212_pilon exonerate:protein2genome:local gene 65645 66000 500 + . gene_id 0 ; sequence GL50803_3680-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 65645 66000 . + . utg212_pilon exonerate:protein2genome:local exon 65645 66000 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 65645 66000 500 + . alignment_id 0 ; Query GL50803_3680-t26_1-p1 ; Align 65645 1 234 ; Align 65881 80 120 utg18_pilon exonerate:protein2genome:local gene 119596 214493 111 + . gene_id 0 ; sequence GL50803_36828-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 119596 119631 . + . utg18_pilon exonerate:protein2genome:local exon 119596 119631 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local splice5 119632 119633 . + . intron_id 1 ; splice_site "GC" utg18_pilon exonerate:protein2genome:local intron 119632 214343 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 214342 214343 . + . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 214344 214493 . + . utg18_pilon exonerate:protein2genome:local exon 214344 214493 . + . insertions 3 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 119596 214493 111 + . alignment_id 0 ; Query GL50803_36828-t26_1-p1 ; Align 119596 1 36 ; Align 214344 13 9 ; Align 214356 16 138 utg18_pilon exonerate:protein2genome:local gene 223147 223296 209 + . gene_id 0 ; sequence GL50803_36844-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 223147 223296 . + . utg18_pilon exonerate:protein2genome:local exon 223147 223296 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 223147 223296 209 + . alignment_id 0 ; Query GL50803_36844-t26_1-p1 ; Align 223147 2 150 utg18_pilon exonerate:protein2genome:local gene 305492 305650 153 - . gene_id 0 ; sequence GL50803_36866-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 305492 305650 . - . utg18_pilon exonerate:protein2genome:local exon 305492 305650 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 305492 305650 153 - . alignment_id 0 ; Query GL50803_36866-t26_1-p1 ; Align 305651 2 159 utg18_pilon exonerate:protein2genome:local gene 296534 296656 160 - . gene_id 0 ; sequence GL50803_36869-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 296534 296656 . - . utg18_pilon exonerate:protein2genome:local exon 296534 296656 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 296534 296656 160 - . alignment_id 0 ; Query GL50803_36869-t26_1-p1 ; Align 296657 1 123 utg47_pilon exonerate:protein2genome:local gene 570081 570401 327 - . gene_id 0 ; sequence GL50803_36883-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 570081 570401 . - . utg47_pilon exonerate:protein2genome:local exon 570081 570401 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 570081 570401 327 - . alignment_id 0 ; Query GL50803_36883-t26_1-p1 ; Align 570402 1 321 utg47_pilon exonerate:protein2genome:local gene 563959 566057 2673 - . gene_id 0 ; sequence GL50803_36884-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 563959 566057 . - . utg47_pilon exonerate:protein2genome:local exon 563959 566057 . - . insertions 12 ; deletions 2 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 563959 566057 2673 - . alignment_id 0 ; Query GL50803_36884-t26_1-p1 ; Align 566058 1 90 ; Align 565966 32 1398 ; Align 564556 498 435 ; Align 564121 644 162 utg11_pilon exonerate:protein2genome:local gene 892811 893083 308 - . gene_id 0 ; sequence GL50803_36897-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 892811 893083 . - . utg11_pilon exonerate:protein2genome:local exon 892811 893083 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 892811 893083 308 - . alignment_id 0 ; Query GL50803_36897-t26_1-p1 ; Align 893084 1 273 utg11_pilon exonerate:protein2genome:local gene 900986 901132 134 - . gene_id 0 ; sequence GL50803_36905-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 900986 901132 . - . utg11_pilon exonerate:protein2genome:local exon 900986 901132 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 900986 901132 134 - . alignment_id 0 ; Query GL50803_36905-t26_1-p1 ; Align 901133 3 147 utg731_pilon exonerate:protein2genome:local gene 1113333 1113572 196 + . gene_id 0 ; sequence GL50803_36907-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1113333 1113572 . + . utg731_pilon exonerate:protein2genome:local exon 1113333 1113572 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1113333 1113572 196 + . alignment_id 0 ; Query GL50803_36907-t26_1-p1 ; Align 1113333 29 240 utg11_pilon exonerate:protein2genome:local gene 837549 837716 197 - . gene_id 0 ; sequence GL50803_36915-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 837549 837716 . - . utg11_pilon exonerate:protein2genome:local exon 837549 837716 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 837549 837716 197 - . alignment_id 0 ; Query GL50803_36915-t26_1-p1 ; Align 837717 1 168 utg11_pilon exonerate:protein2genome:local gene 866895 867041 136 - . gene_id 0 ; sequence GL50803_36929-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 866895 867041 . - . utg11_pilon exonerate:protein2genome:local exon 866895 867041 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 866895 867041 136 - . alignment_id 0 ; Query GL50803_36929-t26_1-p1 ; Align 867042 1 147 utg11_pilon exonerate:protein2genome:local gene 870368 870643 258 - . gene_id 0 ; sequence GL50803_36936-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 870368 870643 . - . utg11_pilon exonerate:protein2genome:local exon 870368 870643 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 870368 870643 258 - . alignment_id 0 ; Query GL50803_36936-t26_1-p1 ; Align 870644 1 276 utg47_pilon exonerate:protein2genome:local gene 1066470 1073046 6962 + . gene_id 0 ; sequence GL50803_36943-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1066470 1073046 . + . utg47_pilon exonerate:protein2genome:local exon 1066470 1073046 . + . insertions 0 ; deletions 9 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1066470 1073046 6962 + . alignment_id 0 ; Query GL50803_36943-t26_1-p1 ; Align 1066470 1 192 ; Align 1066663 65 2391 ; Align 1069054 865 36 ; Align 1069090 878 825 ; Align 1069915 1154 525 ; Align 1070440 1330 1395 ; Align 1071835 1798 1212 utg47_pilon exonerate:protein2genome:local gene 1112231 1112335 134 + . gene_id 0 ; sequence GL50803_36954-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1112231 1112335 . + . utg47_pilon exonerate:protein2genome:local exon 1112231 1112335 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1112231 1112335 134 + . alignment_id 0 ; Query GL50803_36954-t26_1-p1 ; Align 1112231 2 105 utg47_pilon exonerate:protein2genome:local gene 1118791 1118934 111 + . gene_id 0 ; sequence GL50803_36959-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1118791 1118934 . + . utg47_pilon exonerate:protein2genome:local exon 1118791 1118934 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1118791 1118934 111 + . alignment_id 0 ; Query GL50803_36959-t26_1-p1 ; Align 1118791 1 144 utg47_pilon exonerate:protein2genome:local gene 1149009 1149203 281 + . gene_id 0 ; sequence GL50803_36965-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1149009 1149203 . + . utg47_pilon exonerate:protein2genome:local exon 1149009 1149203 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1149009 1149203 281 + . alignment_id 0 ; Query GL50803_36965-t26_1-p1 ; Align 1149009 1 195 utg47_pilon exonerate:protein2genome:local gene 1075995 1076258 266 + . gene_id 0 ; sequence GL50803_36969-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1075995 1076258 . + . utg47_pilon exonerate:protein2genome:local exon 1075995 1076258 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1075995 1076258 266 + . alignment_id 0 ; Query GL50803_36969-t26_1-p1 ; Align 1075995 1 264 utg47_pilon exonerate:protein2genome:local gene 1090490 1090921 466 + . gene_id 0 ; sequence GL50803_36974-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1090490 1090921 . + . utg47_pilon exonerate:protein2genome:local exon 1090490 1090921 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1090490 1090921 466 + . alignment_id 0 ; Query GL50803_36974-t26_1-p1 ; Align 1090490 1 432 utg47_pilon exonerate:protein2genome:local gene 1093040 1093324 186 + . gene_id 0 ; sequence GL50803_36975-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1093040 1093324 . + . utg47_pilon exonerate:protein2genome:local exon 1093040 1093324 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1093040 1093324 186 + . alignment_id 0 ; Query GL50803_36975-t26_1-p1 ; Align 1093040 1 60 ; Align 1093103 21 222 utg47_pilon exonerate:protein2genome:local gene 1116824 1117066 225 + . gene_id 0 ; sequence GL50803_36980-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1116824 1117066 . + . utg47_pilon exonerate:protein2genome:local exon 1116824 1117066 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1116824 1117066 225 + . alignment_id 0 ; Query GL50803_36980-t26_1-p1 ; Align 1116824 1 243 utg47_pilon exonerate:protein2genome:local gene 1130662 1130862 211 + . gene_id 0 ; sequence GL50803_36986-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1130662 1130862 . + . utg47_pilon exonerate:protein2genome:local exon 1130662 1130862 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1130662 1130862 211 + . alignment_id 0 ; Query GL50803_36986-t26_1-p1 ; Align 1130662 1 201 utg47_pilon exonerate:protein2genome:local gene 1150076 1150243 127 + . gene_id 0 ; sequence GL50803_36989-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1150076 1150243 . + . utg47_pilon exonerate:protein2genome:local exon 1150076 1150243 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1150076 1150243 127 + . alignment_id 0 ; Query GL50803_36989-t26_1-p1 ; Align 1150076 3 168 utg47_pilon exonerate:protein2genome:local gene 1063939 1064064 135 + . gene_id 0 ; sequence GL50803_36990-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1063939 1064064 . + . utg47_pilon exonerate:protein2genome:local exon 1063939 1064064 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1063939 1064064 135 + . alignment_id 0 ; Query GL50803_36990-t26_1-p1 ; Align 1063939 1 126 utg349_pilon exonerate:protein2genome:local gene 34648 35088 355 - . gene_id 0 ; sequence GL50803_36991-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 34648 35088 . - . utg349_pilon exonerate:protein2genome:local exon 34648 35088 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 34648 35088 355 - . alignment_id 0 ; Query GL50803_36991-t26_1-p1 ; Align 35089 2 441 utg11_pilon exonerate:protein2genome:local gene 224838 279918 284 + . gene_id 0 ; sequence GL50803_37004-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 224838 224969 . + . utg11_pilon exonerate:protein2genome:local exon 224838 224969 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 224970 224971 . + . intron_id 1 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local intron 224970 225080 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 225079 225080 . + . intron_id 0 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 225081 225184 . + . utg11_pilon exonerate:protein2genome:local exon 225081 225184 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 225185 225186 . + . intron_id 2 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 225185 225850 . + . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 225849 225850 . + . intron_id 1 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 225851 225899 . + . utg11_pilon exonerate:protein2genome:local exon 225851 225899 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 225900 225901 . + . intron_id 3 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 225900 279780 . + . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 279779 279780 . + . intron_id 2 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 279781 279918 . + . utg11_pilon exonerate:protein2genome:local exon 279781 279918 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 224838 279918 284 + . alignment_id 0 ; Query GL50803_37004-t26_1-p1 ; Align 224838 1 132 ; Align 225081 45 102 ; Align 225852 80 48 ; Align 279781 96 93 ; Align 279877 127 42 utg11_pilon exonerate:protein2genome:local gene 664442 664678 196 - . gene_id 0 ; sequence GL50803_37037-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 664442 664678 . - . utg11_pilon exonerate:protein2genome:local exon 664442 664678 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 664442 664678 196 - . alignment_id 0 ; Query GL50803_37037-t26_1-p1 ; Align 664679 1 237 utg265_pilon exonerate:protein2genome:local gene 827398 828180 1131 + . gene_id 0 ; sequence GL50803_3705-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 827398 828180 . + . utg265_pilon exonerate:protein2genome:local exon 827398 828180 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 827398 828180 1131 + . alignment_id 0 ; Query GL50803_3705-t26_1-p1 ; Align 827398 1 783 utg47_pilon exonerate:protein2genome:local gene 1744443 1744730 240 + . gene_id 0 ; sequence GL50803_37055-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1744443 1744730 . + . utg47_pilon exonerate:protein2genome:local exon 1744443 1744730 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1744443 1744730 240 + . alignment_id 0 ; Query GL50803_37055-t26_1-p1 ; Align 1744443 1 288 utg265_pilon exonerate:protein2genome:local gene 828218 829843 2049 - . gene_id 0 ; sequence GL50803_3706-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 828218 829843 . - . utg265_pilon exonerate:protein2genome:local exon 828218 829843 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 828218 829843 2049 - . alignment_id 0 ; Query GL50803_3706-t26_1-p1 ; Align 829844 1 1626 utg47_pilon exonerate:protein2genome:local gene 522668 522898 316 - . gene_id 0 ; sequence GL50803_37061-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 522668 522898 . - . utg47_pilon exonerate:protein2genome:local exon 522668 522898 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 522668 522898 316 - . alignment_id 0 ; Query GL50803_37061-t26_1-p1 ; Align 522899 1 231 utg47_pilon exonerate:protein2genome:local gene 522912 523145 187 - . gene_id 0 ; sequence GL50803_37066-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 522912 523145 . - . utg47_pilon exonerate:protein2genome:local exon 522912 523145 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 522912 523145 187 - . alignment_id 0 ; Query GL50803_37066-t26_1-p1 ; Align 523146 2 234 utg47_pilon exonerate:protein2genome:local gene 522099 522206 123 - . gene_id 0 ; sequence GL50803_37068-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 522099 522206 . - . utg47_pilon exonerate:protein2genome:local exon 522099 522206 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 522099 522206 123 - . alignment_id 0 ; Query GL50803_37068-t26_1-p1 ; Align 522207 15 108 utg47_pilon exonerate:protein2genome:local gene 519092 519265 206 - . gene_id 0 ; sequence GL50803_37070-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 519092 519265 . - . utg47_pilon exonerate:protein2genome:local exon 519092 519265 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 519092 519265 206 - . alignment_id 0 ; Query GL50803_37070-t26_1-p1 ; Align 519266 1 174 utg47_pilon exonerate:protein2genome:local gene 517839 518102 301 - . gene_id 0 ; sequence GL50803_37071-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 517839 518102 . - . utg47_pilon exonerate:protein2genome:local exon 517839 518102 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 517839 518102 301 - . alignment_id 0 ; Query GL50803_37071-t26_1-p1 ; Align 518103 1 264 utg47_pilon exonerate:protein2genome:local gene 996803 997009 221 - . gene_id 0 ; sequence GL50803_37087-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 996803 997009 . - . utg47_pilon exonerate:protein2genome:local exon 996803 997009 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 996803 997009 221 - . alignment_id 0 ; Query GL50803_37087-t26_1-p1 ; Align 997010 1 207 utg47_pilon exonerate:protein2genome:local gene 305376 984547 1127 - . gene_id 0 ; sequence GL50803_37093-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 984291 984547 . - . utg47_pilon exonerate:protein2genome:local exon 984291 984547 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local splice5 984289 984290 . - . intron_id 1 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 789850 984290 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 789850 789851 . - . intron_id 0 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local cds 789832 789849 . - . utg47_pilon exonerate:protein2genome:local exon 789832 789849 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 789830 789831 . - . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 722582 789831 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 722582 722583 . - . intron_id 1 ; splice_site "TT" utg47_pilon exonerate:protein2genome:local cds 722492 722581 . - . utg47_pilon exonerate:protein2genome:local exon 722492 722581 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 722490 722491 . - . intron_id 3 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 722176 722491 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 722176 722177 . - . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 722044 722175 . - . utg47_pilon exonerate:protein2genome:local exon 722044 722175 . - . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local splice5 722042 722043 . - . intron_id 4 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 626324 722043 . - . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 626324 626325 . - . intron_id 3 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 626066 626323 . - . utg47_pilon exonerate:protein2genome:local exon 626066 626323 . - . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local splice5 626064 626065 . - . intron_id 5 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 443759 626065 . - . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 443759 443760 . - . intron_id 4 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 442895 443758 . - . utg47_pilon exonerate:protein2genome:local exon 442895 443758 . - . insertions 15 ; deletions 7 utg47_pilon exonerate:protein2genome:local splice5 442893 442894 . - . intron_id 6 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local intron 305522 442894 . - . intron_id 6 utg47_pilon exonerate:protein2genome:local splice3 305522 305523 . - . intron_id 5 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 305376 305521 . - . utg47_pilon exonerate:protein2genome:local exon 305376 305521 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 305376 984547 1127 - . alignment_id 0 ; Query GL50803_37093-t26_1-p1 ; Align 984548 39 129 ; Align 984418 82 99 ; Align 984319 116 27 ; Align 789848 126 15 ; Align 722580 132 87 ; Align 722174 162 15 ; Align 722159 169 39 ; Align 722120 184 15 ; Align 722105 190 60 ; Align 626322 211 81 ; Align 626241 242 24 ; Align 626217 251 150 ; Align 443757 302 48 ; Align 443706 318 27 ; Align 443676 327 132 ; Align 443544 372 93 ; Align 443448 403 162 ; Align 443283 457 159 ; Align 443124 511 72 ; Align 443049 535 36 ; Align 443013 548 42 ; Align 442971 565 42 ; Align 442929 580 33 ; Align 305520 592 21 ; Align 305496 599 120 utg47_pilon exonerate:protein2genome:local gene 1519942 1520061 182 + . gene_id 0 ; sequence GL50803_37097-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1519942 1520061 . + . utg47_pilon exonerate:protein2genome:local exon 1519942 1520061 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1519942 1520061 182 + . alignment_id 0 ; Query GL50803_37097-t26_1-p1 ; Align 1519942 1 120 utg47_pilon exonerate:protein2genome:local gene 1545039 1545215 186 + . gene_id 0 ; sequence GL50803_37105-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1545039 1545215 . + . utg47_pilon exonerate:protein2genome:local exon 1545039 1545215 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1545039 1545215 186 + . alignment_id 0 ; Query GL50803_37105-t26_1-p1 ; Align 1545039 1 177 utg47_pilon exonerate:protein2genome:local gene 1511163 1511309 107 + . gene_id 0 ; sequence GL50803_37109-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1511163 1511309 . + . utg47_pilon exonerate:protein2genome:local exon 1511163 1511309 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1511163 1511309 107 + . alignment_id 0 ; Query GL50803_37109-t26_1-p1 ; Align 1511163 6 147 utg47_pilon exonerate:protein2genome:local gene 1523064 1523345 214 + . gene_id 0 ; sequence GL50803_37115-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1523064 1523345 . + . utg47_pilon exonerate:protein2genome:local exon 1523064 1523345 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1523064 1523345 214 + . alignment_id 0 ; Query GL50803_37115-t26_1-p1 ; Align 1523064 6 282 utg47_pilon exonerate:protein2genome:local gene 1532597 1533007 573 + . gene_id 0 ; sequence GL50803_3713-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1532597 1533007 . + . utg47_pilon exonerate:protein2genome:local exon 1532597 1533007 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1532597 1533007 573 + . alignment_id 0 ; Query GL50803_3713-t26_1-p1 ; Align 1532597 1 411 utg731_pilon exonerate:protein2genome:local gene 472191 472373 214 + . gene_id 0 ; sequence GL50803_37130-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 472191 472373 . + . utg731_pilon exonerate:protein2genome:local exon 472191 472373 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 472191 472373 214 + . alignment_id 0 ; Query GL50803_37130-t26_1-p1 ; Align 472191 7 183 utg731_pilon exonerate:protein2genome:local gene 476834 477025 131 + . gene_id 0 ; sequence GL50803_37131-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 476834 477025 . + . utg731_pilon exonerate:protein2genome:local exon 476834 477025 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 476834 477025 131 + . alignment_id 0 ; Query GL50803_37131-t26_1-p1 ; Align 476834 1 192 utg731_pilon exonerate:protein2genome:local gene 451168 451302 190 + . gene_id 0 ; sequence GL50803_37137-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 451168 451302 . + . utg731_pilon exonerate:protein2genome:local exon 451168 451302 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 451168 451302 190 + . alignment_id 0 ; Query GL50803_37137-t26_1-p1 ; Align 451168 1 135 utg731_pilon exonerate:protein2genome:local gene 440857 441060 161 + . gene_id 0 ; sequence GL50803_37138-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 440857 441060 . + . utg731_pilon exonerate:protein2genome:local exon 440857 441060 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 440857 441060 161 + . alignment_id 0 ; Query GL50803_37138-t26_1-p1 ; Align 440857 1 204 utg731_pilon exonerate:protein2genome:local gene 472877 473266 328 + . gene_id 0 ; sequence GL50803_37141-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 472877 473266 . + . utg731_pilon exonerate:protein2genome:local exon 472877 473266 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 472877 473266 328 + . alignment_id 0 ; Query GL50803_37141-t26_1-p1 ; Align 472877 1 390 utg64_pilon exonerate:protein2genome:local gene 316780 319659 3411 - . gene_id 0 ; sequence GL50803_37161-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 316780 319659 . - . utg64_pilon exonerate:protein2genome:local exon 316780 319659 . - . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 316780 319659 3411 - . alignment_id 0 ; Query GL50803_37161-t26_1-p1 ; Align 319660 1 1290 ; Align 318370 433 1590 utg64_pilon exonerate:protein2genome:local gene 441763 441966 232 - . gene_id 0 ; sequence GL50803_37170-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 441763 441966 . - . utg64_pilon exonerate:protein2genome:local exon 441763 441966 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 441763 441966 232 - . alignment_id 0 ; Query GL50803_37170-t26_1-p1 ; Align 441967 1 204 utg64_pilon exonerate:protein2genome:local gene 420446 420685 113 - . gene_id 0 ; sequence GL50803_37173-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 420446 420685 . - . utg64_pilon exonerate:protein2genome:local exon 420446 420685 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 420446 420685 113 - . alignment_id 0 ; Query GL50803_37173-t26_1-p1 ; Align 420686 107 240 utg8808_pilon exonerate:protein2genome:local gene 19286 19525 113 - . gene_id 0 ; sequence GL50803_37173-t26_1-p1 ; gene_orientation . utg8808_pilon exonerate:protein2genome:local cds 19286 19525 . - . utg8808_pilon exonerate:protein2genome:local exon 19286 19525 . - . insertions 0 ; deletions 0 utg8808_pilon exonerate:protein2genome:local similarity 19286 19525 113 - . alignment_id 0 ; Query GL50803_37173-t26_1-p1 ; Align 19526 107 240 utg64_pilon exonerate:protein2genome:local gene 330141 330353 251 - . gene_id 0 ; sequence GL50803_37190-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 330141 330353 . - . utg64_pilon exonerate:protein2genome:local exon 330141 330353 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 330141 330353 251 - . alignment_id 0 ; Query GL50803_37190-t26_1-p1 ; Align 330354 1 213 utg64_pilon exonerate:protein2genome:local gene 287549 324348 168 - . gene_id 0 ; sequence GL50803_37193-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 324200 324348 . - . utg64_pilon exonerate:protein2genome:local exon 324200 324348 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 324198 324199 . - . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 287607 324199 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 287607 287608 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 287549 287606 . - . utg64_pilon exonerate:protein2genome:local exon 287549 287606 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 287549 324348 168 - . alignment_id 0 ; Query GL50803_37193-t26_1-p1 ; Align 324349 1 147 ; Align 287606 51 57 utg64_pilon exonerate:protein2genome:local gene 302295 302396 134 - . gene_id 0 ; sequence GL50803_37198-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 302295 302396 . - . utg64_pilon exonerate:protein2genome:local exon 302295 302396 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 302295 302396 134 - . alignment_id 0 ; Query GL50803_37198-t26_1-p1 ; Align 302397 1 102 utg731_pilon exonerate:protein2genome:local gene 1605247 1605765 768 - . gene_id 0 ; sequence GL50803_3720-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1605247 1605765 . - . utg731_pilon exonerate:protein2genome:local exon 1605247 1605765 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1605247 1605765 768 - . alignment_id 0 ; Query GL50803_3720-t26_1-p1 ; Align 1605766 1 519 utg64_pilon exonerate:protein2genome:local gene 448154 448378 157 - . gene_id 0 ; sequence GL50803_37203-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 448154 448378 . - . utg64_pilon exonerate:protein2genome:local exon 448154 448378 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 448154 448378 157 - . alignment_id 0 ; Query GL50803_37203-t26_1-p1 ; Align 448379 8 225 utg64_pilon exonerate:protein2genome:local gene 443153 443380 213 - . gene_id 0 ; sequence GL50803_37204-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 443153 443380 . - . utg64_pilon exonerate:protein2genome:local exon 443153 443380 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 443153 443380 213 - . alignment_id 0 ; Query GL50803_37204-t26_1-p1 ; Align 443381 1 228 utg64_pilon exonerate:protein2genome:local gene 404683 404814 127 - . gene_id 0 ; sequence GL50803_37211-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 404683 404814 . - . utg64_pilon exonerate:protein2genome:local exon 404683 404814 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 404683 404814 127 - . alignment_id 0 ; Query GL50803_37211-t26_1-p1 ; Align 404815 1 132 utg64_pilon exonerate:protein2genome:local gene 404449 404556 100 - . gene_id 0 ; sequence GL50803_37212-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 404449 404556 . - . utg64_pilon exonerate:protein2genome:local exon 404449 404556 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 404449 404556 100 - . alignment_id 0 ; Query GL50803_37212-t26_1-p1 ; Align 404557 1 108 utg64_pilon exonerate:protein2genome:local gene 330055 330252 150 - . gene_id 0 ; sequence GL50803_37225-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 330055 330252 . - . utg64_pilon exonerate:protein2genome:local exon 330055 330252 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 330055 330252 150 - . alignment_id 0 ; Query GL50803_37225-t26_1-p1 ; Align 330253 3 198 utg308_pilon exonerate:protein2genome:local gene 777725 777964 247 - . gene_id 0 ; sequence GL50803_37232-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 777725 777964 . - . utg308_pilon exonerate:protein2genome:local exon 777725 777964 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 777725 777964 247 - . alignment_id 0 ; Query GL50803_37232-t26_1-p1 ; Align 777965 1 240 utg308_pilon exonerate:protein2genome:local gene 791320 791547 194 - . gene_id 0 ; sequence GL50803_37235-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 791320 791547 . - . utg308_pilon exonerate:protein2genome:local exon 791320 791547 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 791320 791547 194 - . alignment_id 0 ; Query GL50803_37235-t26_1-p1 ; Align 791548 1 228 utg308_pilon exonerate:protein2genome:local gene 775169 775375 207 - . gene_id 0 ; sequence GL50803_37242-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 775169 775375 . - . utg308_pilon exonerate:protein2genome:local exon 775169 775375 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 775169 775375 207 - . alignment_id 0 ; Query GL50803_37242-t26_1-p1 ; Align 775376 4 207 utg308_pilon exonerate:protein2genome:local gene 770290 770394 123 - . gene_id 0 ; sequence GL50803_37243-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 770290 770394 . - . utg308_pilon exonerate:protein2genome:local exon 770290 770394 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 770290 770394 123 - . alignment_id 0 ; Query GL50803_37243-t26_1-p1 ; Align 770395 1 105 utg308_pilon exonerate:protein2genome:local gene 661955 662074 140 + . gene_id 0 ; sequence GL50803_37264-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 661955 662074 . + . utg308_pilon exonerate:protein2genome:local exon 661955 662074 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 661955 662074 140 + . alignment_id 0 ; Query GL50803_37264-t26_1-p1 ; Align 661955 4 120 utg308_pilon exonerate:protein2genome:local gene 681091 681315 253 + . gene_id 0 ; sequence GL50803_37271-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 681091 681315 . + . utg308_pilon exonerate:protein2genome:local exon 681091 681315 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 681091 681315 253 + . alignment_id 0 ; Query GL50803_37271-t26_1-p1 ; Align 681091 1 225 utg308_pilon exonerate:protein2genome:local gene 623282 623722 470 + . gene_id 0 ; sequence GL50803_37275-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 623282 623722 . + . utg308_pilon exonerate:protein2genome:local exon 623282 623722 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 623282 623722 470 + . alignment_id 0 ; Query GL50803_37275-t26_1-p1 ; Align 623282 1 441 utg308_pilon exonerate:protein2genome:local gene 629337 629453 112 + . gene_id 0 ; sequence GL50803_37276-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 629337 629453 . + . utg308_pilon exonerate:protein2genome:local exon 629337 629453 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 629337 629453 112 + . alignment_id 0 ; Query GL50803_37276-t26_1-p1 ; Align 629337 1 117 utg308_pilon exonerate:protein2genome:local gene 636990 637202 165 + . gene_id 0 ; sequence GL50803_37280-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 636990 637202 . + . utg308_pilon exonerate:protein2genome:local exon 636990 637202 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 636990 637202 165 + . alignment_id 0 ; Query GL50803_37280-t26_1-p1 ; Align 636990 1 213 utg308_pilon exonerate:protein2genome:local gene 660202 660405 218 + . gene_id 0 ; sequence GL50803_37286-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 660202 660405 . + . utg308_pilon exonerate:protein2genome:local exon 660202 660405 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 660202 660405 218 + . alignment_id 0 ; Query GL50803_37286-t26_1-p1 ; Align 660202 1 204 utg308_pilon exonerate:protein2genome:local gene 665235 665420 163 + . gene_id 0 ; sequence GL50803_37288-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 665235 665420 . + . utg308_pilon exonerate:protein2genome:local exon 665235 665420 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 665235 665420 163 + . alignment_id 0 ; Query GL50803_37288-t26_1-p1 ; Align 665235 1 186 utg731_pilon exonerate:protein2genome:local gene 1249063 1249632 763 - . gene_id 0 ; sequence GL50803_3731-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1249063 1249632 . - . utg731_pilon exonerate:protein2genome:local exon 1249063 1249632 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1249063 1249632 763 - . alignment_id 0 ; Query GL50803_3731-t26_1-p1 ; Align 1249633 1 570 utg1966_pilon exonerate:protein2genome:local gene 77229 77978 525 + . gene_id 0 ; sequence GL50803_37321-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 77229 77978 . + . utg1966_pilon exonerate:protein2genome:local exon 77229 77978 . + . insertions 3 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 77229 77978 525 + . alignment_id 0 ; Query GL50803_37321-t26_1-p1 ; Align 77229 5 225 ; Align 77457 80 522 utg731_pilon exonerate:protein2genome:local gene 1245564 1245812 350 - . gene_id 0 ; sequence GL50803_3733-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1245564 1245812 . - . utg731_pilon exonerate:protein2genome:local exon 1245564 1245812 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1245564 1245812 350 - . alignment_id 0 ; Query GL50803_3733-t26_1-p1 ; Align 1245813 1 249 utg11_pilon exonerate:protein2genome:local gene 1766586 1766690 100 - . gene_id 0 ; sequence GL50803_37338-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1766586 1766690 . - . utg11_pilon exonerate:protein2genome:local exon 1766586 1766690 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1766586 1766690 100 - . alignment_id 0 ; Query GL50803_37338-t26_1-p1 ; Align 1766691 5 105 utg731_pilon exonerate:protein2genome:local gene 66297 254620 24122 + . gene_id 0 ; sequence GL50803_37350-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 66297 66324 . + . utg731_pilon exonerate:protein2genome:local exon 66297 66324 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 66325 66326 . + . intron_id 1 ; splice_site "CT" utg731_pilon exonerate:protein2genome:local intron 66325 238406 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 238405 238406 . + . intron_id 0 ; splice_site "GG" utg731_pilon exonerate:protein2genome:local cds 238407 254620 . + . utg731_pilon exonerate:protein2genome:local exon 238407 254620 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 66297 254620 24122 + . alignment_id 0 ; Query GL50803_37350-t26_1-p1 ; Align 66297 1686 27 ; Align 238409 1696 8571 ; Align 246980 4554 7641 utg731_pilon exonerate:protein2genome:local gene 261055 263565 2765 + . gene_id 0 ; sequence GL50803_37353-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 261055 263565 . + . utg731_pilon exonerate:protein2genome:local exon 261055 263565 . + . insertions 33 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 261055 263565 2765 + . alignment_id 0 ; Query GL50803_37353-t26_1-p1 ; Align 261055 1 858 ; Align 261925 287 102 ; Align 262036 321 6 ; Align 262045 323 36 ; Align 262084 335 144 ; Align 262231 383 84 ; Align 262315 412 132 ; Align 262447 457 102 ; Align 262552 491 1014 utg731_pilon exonerate:protein2genome:local gene 273345 273785 394 + . gene_id 0 ; sequence GL50803_37366-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 273345 273785 . + . utg731_pilon exonerate:protein2genome:local exon 273345 273785 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 273345 273785 394 + . alignment_id 0 ; Query GL50803_37366-t26_1-p1 ; Align 273345 1 441 utg731_pilon exonerate:protein2genome:local gene 1242926 1243045 124 + . gene_id 0 ; sequence GL50803_3740-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1242926 1243045 . + . utg731_pilon exonerate:protein2genome:local exon 1242926 1243045 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1242926 1243045 124 + . alignment_id 0 ; Query GL50803_3740-t26_1-p1 ; Align 1242926 1 120 utg308_pilon exonerate:protein2genome:local gene 59300 59545 284 - . gene_id 0 ; sequence GL50803_37418-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 59300 59545 . - . utg308_pilon exonerate:protein2genome:local exon 59300 59545 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 59300 59545 284 - . alignment_id 0 ; Query GL50803_37418-t26_1-p1 ; Align 59546 1 246 utg308_pilon exonerate:protein2genome:local gene 129132 129419 398 - . gene_id 0 ; sequence GL50803_37421-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 129132 129419 . - . utg308_pilon exonerate:protein2genome:local exon 129132 129419 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 129132 129419 398 - . alignment_id 0 ; Query GL50803_37421-t26_1-p1 ; Align 129420 4 288 utg308_pilon exonerate:protein2genome:local gene 110482 110661 138 - . gene_id 0 ; sequence GL50803_37426-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 110482 110661 . - . utg308_pilon exonerate:protein2genome:local exon 110482 110661 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 110482 110661 138 - . alignment_id 0 ; Query GL50803_37426-t26_1-p1 ; Align 110662 1 180 utg308_pilon exonerate:protein2genome:local gene 73898 74263 331 - . gene_id 0 ; sequence GL50803_37430-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 73898 74263 . - . utg308_pilon exonerate:protein2genome:local exon 73898 74263 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 73898 74263 331 - . alignment_id 0 ; Query GL50803_37430-t26_1-p1 ; Align 74264 1 366 utg308_pilon exonerate:protein2genome:local gene 72050 72184 112 - . gene_id 0 ; sequence GL50803_37431-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 72050 72184 . - . utg308_pilon exonerate:protein2genome:local exon 72050 72184 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 72050 72184 112 - . alignment_id 0 ; Query GL50803_37431-t26_1-p1 ; Align 72185 1 135 utg308_pilon exonerate:protein2genome:local gene 70445 70555 106 - . gene_id 0 ; sequence GL50803_37432-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 70445 70555 . - . utg308_pilon exonerate:protein2genome:local exon 70445 70555 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 70445 70555 106 - . alignment_id 0 ; Query GL50803_37432-t26_1-p1 ; Align 70556 3 111 utg349_pilon exonerate:protein2genome:local gene 823733 824005 356 - . gene_id 0 ; sequence GL50803_37441-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 823733 824005 . - . utg349_pilon exonerate:protein2genome:local exon 823733 824005 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 823733 824005 356 - . alignment_id 0 ; Query GL50803_37441-t26_1-p1 ; Align 824006 1 273 utg349_pilon exonerate:protein2genome:local gene 804516 808496 5055 - . gene_id 0 ; sequence GL50803_37449-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 804516 808496 . - . utg349_pilon exonerate:protein2genome:local exon 804516 808496 . - . insertions 0 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 804516 808496 5055 - . alignment_id 0 ; Query GL50803_37449-t26_1-p1 ; Align 808497 921 1524 ; Align 806973 1430 48 ; Align 806925 1447 1704 ; Align 805221 2017 705 utg349_pilon exonerate:protein2genome:local gene 825738 831356 8579 - . gene_id 0 ; sequence GL50803_37452-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 828371 831356 . - . utg349_pilon exonerate:protein2genome:local exon 828371 831356 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 828369 828370 . - . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 828341 828370 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 828341 828342 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 825738 828340 . - . utg349_pilon exonerate:protein2genome:local exon 825738 828340 . - . insertions 6 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 825738 831356 8579 - . alignment_id 0 ; Query GL50803_37452-t26_1-p1 ; Align 831357 1 2985 ; Align 828339 997 24 ; Align 828315 1007 276 ; Align 828033 1099 2295 utg11_pilon exonerate:protein2genome:local gene 873705 877025 3718 + . gene_id 0 ; sequence GL50803_3746-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 873705 874588 . + . utg11_pilon exonerate:protein2genome:local exon 873705 874588 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 874589 874590 . + . intron_id 1 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local intron 874589 874630 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 874629 874630 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 874631 877025 . + . utg11_pilon exonerate:protein2genome:local exon 874631 877025 . + . insertions 6 ; deletions 9 utg11_pilon exonerate:protein2genome:local similarity 873705 877025 3718 + . alignment_id 0 ; Query GL50803_3746-t26_1-p1 ; Align 873705 1 723 ; Align 874428 243 159 ; Align 874632 297 486 ; Align 875118 464 141 ; Align 875259 515 834 ; Align 876096 793 120 ; Align 876219 833 807 utg11_pilon exonerate:protein2genome:local gene 1614070 1614247 133 - . gene_id 0 ; sequence GL50803_37477-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1614070 1614247 . - . utg11_pilon exonerate:protein2genome:local exon 1614070 1614247 . - . insertions 0 ; deletions 0 ; frameshifts 4 utg11_pilon exonerate:protein2genome:local similarity 1614070 1614247 133 - . alignment_id 0 ; Query GL50803_37477-t26_1-p1 ; Align 1614248 1 81 ; Align 1614163 28 93 utg64_pilon exonerate:protein2genome:local gene 977732 977905 143 + . gene_id 0 ; sequence GL50803_37486-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 977732 977905 . + . utg64_pilon exonerate:protein2genome:local exon 977732 977905 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 977732 977905 143 + . alignment_id 0 ; Query GL50803_37486-t26_1-p1 ; Align 977732 1 174 utg64_pilon exonerate:protein2genome:local gene 981091 985515 5653 + . gene_id 0 ; sequence GL50803_37488-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 981091 985515 . + . utg64_pilon exonerate:protein2genome:local exon 981091 985515 . + . insertions 6 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 981091 985515 5653 + . alignment_id 0 ; Query GL50803_37488-t26_1-p1 ; Align 981091 1 543 ; Align 981637 182 147 ; Align 981784 232 2271 ; Align 984058 989 1458 utg64_pilon exonerate:protein2genome:local gene 1000953 1001102 110 + . gene_id 0 ; sequence GL50803_37494-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1000953 1001102 . + . utg64_pilon exonerate:protein2genome:local exon 1000953 1001102 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1000953 1001102 110 + . alignment_id 0 ; Query GL50803_37494-t26_1-p1 ; Align 1000953 3 150 utg64_pilon exonerate:protein2genome:local gene 1010210 1010401 222 + . gene_id 0 ; sequence GL50803_37500-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1010210 1010401 . + . utg64_pilon exonerate:protein2genome:local exon 1010210 1010401 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1010210 1010401 222 + . alignment_id 0 ; Query GL50803_37500-t26_1-p1 ; Align 1010210 1 192 utg64_pilon exonerate:protein2genome:local gene 1013080 1013193 162 + . gene_id 0 ; sequence GL50803_37518-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1013080 1013193 . + . utg64_pilon exonerate:protein2genome:local exon 1013080 1013193 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1013080 1013193 162 + . alignment_id 0 ; Query GL50803_37518-t26_1-p1 ; Align 1013080 3 114 utg64_pilon exonerate:protein2genome:local gene 1013708 1013905 139 + . gene_id 0 ; sequence GL50803_37519-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1013708 1013905 . + . utg64_pilon exonerate:protein2genome:local exon 1013708 1013905 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1013708 1013905 139 + . alignment_id 0 ; Query GL50803_37519-t26_1-p1 ; Align 1013708 1 198 utg64_pilon exonerate:protein2genome:local gene 1014208 1014396 222 + . gene_id 0 ; sequence GL50803_37520-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1014208 1014396 . + . utg64_pilon exonerate:protein2genome:local exon 1014208 1014396 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1014208 1014396 222 + . alignment_id 0 ; Query GL50803_37520-t26_1-p1 ; Align 1014208 1 189 utg64_pilon exonerate:protein2genome:local gene 965328 965459 155 - . gene_id 0 ; sequence GL50803_37526-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 965328 965459 . - . utg64_pilon exonerate:protein2genome:local exon 965328 965459 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 965328 965459 155 - . alignment_id 0 ; Query GL50803_37526-t26_1-p1 ; Align 965460 1 132 utg64_pilon exonerate:protein2genome:local gene 884097 884237 107 + . gene_id 0 ; sequence GL50803_37529-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 884097 884237 . + . utg64_pilon exonerate:protein2genome:local exon 884097 884237 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 884097 884237 107 + . alignment_id 0 ; Query GL50803_37529-t26_1-p1 ; Align 884097 1 141 utg64_pilon exonerate:protein2genome:local gene 891068 891241 177 + . gene_id 0 ; sequence GL50803_37532-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 891068 891241 . + . utg64_pilon exonerate:protein2genome:local exon 891068 891241 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 891068 891241 177 + . alignment_id 0 ; Query GL50803_37532-t26_1-p1 ; Align 891068 1 174 utg64_pilon exonerate:protein2genome:local gene 918536 919498 1000 + . gene_id 0 ; sequence GL50803_37543-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 918536 919498 . + . utg64_pilon exonerate:protein2genome:local exon 918536 919498 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 918536 919498 1000 + . alignment_id 0 ; Query GL50803_37543-t26_1-p1 ; Align 918536 12 963 utg64_pilon exonerate:protein2genome:local gene 865835 865978 127 + . gene_id 0 ; sequence GL50803_37547-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 865835 865978 . + . utg64_pilon exonerate:protein2genome:local exon 865835 865978 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 865835 865978 127 + . alignment_id 0 ; Query GL50803_37547-t26_1-p1 ; Align 865835 1 144 utg99_pilon exonerate:protein2genome:local gene 137007 137543 811 + . gene_id 0 ; sequence GL50803_3755-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 137007 137543 . + . utg99_pilon exonerate:protein2genome:local exon 137007 137543 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 137007 137543 811 + . alignment_id 0 ; Query GL50803_3755-t26_1-p1 ; Align 137007 1 537 utg64_pilon exonerate:protein2genome:local gene 938386 938520 101 + . gene_id 0 ; sequence GL50803_37552-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 938386 938520 . + . utg64_pilon exonerate:protein2genome:local exon 938386 938520 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 938386 938520 101 + . alignment_id 0 ; Query GL50803_37552-t26_1-p1 ; Align 938386 1 135 utg64_pilon exonerate:protein2genome:local gene 951178 951288 157 + . gene_id 0 ; sequence GL50803_37556-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 951178 951288 . + . utg64_pilon exonerate:protein2genome:local exon 951178 951288 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 951178 951288 157 + . alignment_id 0 ; Query GL50803_37556-t26_1-p1 ; Align 951178 1 111 utg99_pilon exonerate:protein2genome:local gene 137558 137986 634 - . gene_id 0 ; sequence GL50803_3756-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 137558 137986 . - . utg99_pilon exonerate:protein2genome:local exon 137558 137986 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 137558 137986 634 - . alignment_id 0 ; Query GL50803_3756-t26_1-p1 ; Align 137987 1 429 utg64_pilon exonerate:protein2genome:local gene 861466 861564 116 + . gene_id 0 ; sequence GL50803_37569-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 861466 861564 . + . utg64_pilon exonerate:protein2genome:local exon 861466 861564 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 861466 861564 116 + . alignment_id 0 ; Query GL50803_37569-t26_1-p1 ; Align 861466 3 99 utg64_pilon exonerate:protein2genome:local gene 893827 893943 109 + . gene_id 0 ; sequence GL50803_37570-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 893827 893943 . + . utg64_pilon exonerate:protein2genome:local exon 893827 893943 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 893827 893943 109 + . alignment_id 0 ; Query GL50803_37570-t26_1-p1 ; Align 893827 1 117 utg64_pilon exonerate:protein2genome:local gene 925622 925864 391 + . gene_id 0 ; sequence GL50803_37578-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 925622 925864 . + . utg64_pilon exonerate:protein2genome:local exon 925622 925864 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 925622 925864 391 + . alignment_id 0 ; Query GL50803_37578-t26_1-p1 ; Align 925622 1 243 utg64_pilon exonerate:protein2genome:local gene 678799 679020 165 + . gene_id 0 ; sequence GL50803_37588-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 678799 679020 . + . utg64_pilon exonerate:protein2genome:local exon 678799 679020 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 678799 679020 165 + . alignment_id 0 ; Query GL50803_37588-t26_1-p1 ; Align 678799 1 36 ; Align 678838 13 183 utg64_pilon exonerate:protein2genome:local gene 678641 678739 137 + . gene_id 0 ; sequence GL50803_37589-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 678641 678739 . + . utg64_pilon exonerate:protein2genome:local exon 678641 678739 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 678641 678739 137 + . alignment_id 0 ; Query GL50803_37589-t26_1-p1 ; Align 678641 1 99 utg11_pilon exonerate:protein2genome:local gene 504410 504645 169 - . gene_id 0 ; sequence GL50803_3759-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 504410 504645 . - . utg11_pilon exonerate:protein2genome:local exon 504410 504645 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 504410 504645 169 - . alignment_id 0 ; Query GL50803_3759-t26_1-p1 ; Align 504646 1 60 ; Align 504584 21 174 utg64_pilon exonerate:protein2genome:local gene 685204 685413 216 + . gene_id 0 ; sequence GL50803_37595-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 685204 685413 . + . utg64_pilon exonerate:protein2genome:local exon 685204 685413 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 685204 685413 216 + . alignment_id 0 ; Query GL50803_37595-t26_1-p1 ; Align 685204 1 210 utg11_pilon exonerate:protein2genome:local gene 504623 505987 2022 + . gene_id 0 ; sequence GL50803_3760-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 504623 505987 . + . utg11_pilon exonerate:protein2genome:local exon 504623 505987 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 504623 505987 2022 + . alignment_id 0 ; Query GL50803_3760-t26_1-p1 ; Align 504623 1 1365 utg64_pilon exonerate:protein2genome:local gene 672175 672282 100 + . gene_id 0 ; sequence GL50803_37601-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 672175 672282 . + . utg64_pilon exonerate:protein2genome:local exon 672175 672282 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 672175 672282 100 + . alignment_id 0 ; Query GL50803_37601-t26_1-p1 ; Align 672175 11 108 utg64_pilon exonerate:protein2genome:local gene 684754 684975 189 + . gene_id 0 ; sequence GL50803_37605-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 684754 684975 . + . utg64_pilon exonerate:protein2genome:local exon 684754 684975 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 684754 684975 189 + . alignment_id 0 ; Query GL50803_37605-t26_1-p1 ; Align 684754 1 222 utg64_pilon exonerate:protein2genome:local gene 687522 687674 124 + . gene_id 0 ; sequence GL50803_37607-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 687522 687674 . + . utg64_pilon exonerate:protein2genome:local exon 687522 687674 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 687522 687674 124 + . alignment_id 0 ; Query GL50803_37607-t26_1-p1 ; Align 687522 1 153 utg11_pilon exonerate:protein2genome:local gene 504794 509277 1890 + . gene_id 0 ; sequence GL50803_3762-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 504794 504923 . + . utg11_pilon exonerate:protein2genome:local exon 504794 504923 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 504924 504925 . + . intron_id 1 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 504924 507160 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 507159 507160 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 507161 507643 . + . utg11_pilon exonerate:protein2genome:local exon 507161 507643 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 507644 507645 . + . intron_id 2 ; splice_site "TT" utg11_pilon exonerate:protein2genome:local intron 507644 507715 . + . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 507714 507715 . + . intron_id 1 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local cds 507716 509277 . + . utg11_pilon exonerate:protein2genome:local exon 507716 509277 . + . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 504794 509277 1890 + . alignment_id 0 ; Query GL50803_3762-t26_1-p1 ; Align 504794 30 129 ; Align 507163 74 480 ; Align 507718 235 144 ; Align 507865 283 324 ; Align 508192 391 1086 utg212_pilon exonerate:protein2genome:local gene 235351 245543 11503 - . gene_id 0 ; sequence GL50803_37620-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 235351 245543 . - . utg212_pilon exonerate:protein2genome:local exon 235351 245543 . - . insertions 27 ; deletions 9 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 235351 245543 11503 - . alignment_id 0 ; Query GL50803_37620-t26_1-p1 ; Align 245544 11 1461 ; Align 244077 498 2811 ; Align 241266 1436 84 ; Align 241176 1464 324 ; Align 240849 1572 300 ; Align 240546 1672 1716 ; Align 238829 2244 126 ; Align 238703 2289 222 ; Align 238472 2363 1338 ; Align 237133 2810 1455 ; Align 235678 3299 327 utg212_pilon exonerate:protein2genome:local gene 223920 224099 177 - . gene_id 0 ; sequence GL50803_37622-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 223920 224099 . - . utg212_pilon exonerate:protein2genome:local exon 223920 224099 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 223920 224099 177 - . alignment_id 0 ; Query GL50803_37622-t26_1-p1 ; Align 224100 1 180 utg11_pilon exonerate:protein2genome:local gene 509542 509988 748 + . gene_id 0 ; sequence GL50803_3763-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 509542 509988 . + . utg11_pilon exonerate:protein2genome:local exon 509542 509988 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 509542 509988 748 + . alignment_id 0 ; Query GL50803_3763-t26_1-p1 ; Align 509542 1 447 utg212_pilon exonerate:protein2genome:local gene 343175 343360 196 - . gene_id 0 ; sequence GL50803_37632-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 343175 343360 . - . utg212_pilon exonerate:protein2genome:local exon 343175 343360 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 343175 343360 196 - . alignment_id 0 ; Query GL50803_37632-t26_1-p1 ; Align 343361 2 186 utg212_pilon exonerate:protein2genome:local gene 327991 328209 174 - . gene_id 0 ; sequence GL50803_37636-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 327991 328209 . - . utg212_pilon exonerate:protein2genome:local exon 327991 328209 . - . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local similarity 327991 328209 174 - . alignment_id 0 ; Query GL50803_37636-t26_1-p1 ; Align 328210 1 111 ; Align 328099 39 108 utg212_pilon exonerate:protein2genome:local gene 315565 315792 323 - . gene_id 0 ; sequence GL50803_37641-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 315565 315792 . - . utg212_pilon exonerate:protein2genome:local exon 315565 315792 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 315565 315792 323 - . alignment_id 0 ; Query GL50803_37641-t26_1-p1 ; Align 315793 2 228 utg212_pilon exonerate:protein2genome:local gene 306562 306741 233 - . gene_id 0 ; sequence GL50803_37645-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 306562 306741 . - . utg212_pilon exonerate:protein2genome:local exon 306562 306741 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 306562 306741 233 - . alignment_id 0 ; Query GL50803_37645-t26_1-p1 ; Align 306742 2 180 utg212_pilon exonerate:protein2genome:local gene 384826 384999 173 - . gene_id 0 ; sequence GL50803_37655-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 384826 384999 . - . utg212_pilon exonerate:protein2genome:local exon 384826 384999 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 384826 384999 173 - . alignment_id 0 ; Query GL50803_37655-t26_1-p1 ; Align 385000 1 174 utg212_pilon exonerate:protein2genome:local gene 224784 225065 250 - . gene_id 0 ; sequence GL50803_37659-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 224784 225065 . - . utg212_pilon exonerate:protein2genome:local exon 224784 225065 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 224784 225065 250 - . alignment_id 0 ; Query GL50803_37659-t26_1-p1 ; Align 225066 1 282 utg212_pilon exonerate:protein2genome:local gene 394758 394910 174 - . gene_id 0 ; sequence GL50803_37679-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 394758 394910 . - . utg212_pilon exonerate:protein2genome:local exon 394758 394910 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 394758 394910 174 - . alignment_id 0 ; Query GL50803_37679-t26_1-p1 ; Align 394911 1 153 utg212_pilon exonerate:protein2genome:local gene 292280 292435 108 - . gene_id 0 ; sequence GL50803_37683-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 292280 292435 . - . utg212_pilon exonerate:protein2genome:local exon 292280 292435 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 292280 292435 108 - . alignment_id 0 ; Query GL50803_37683-t26_1-p1 ; Align 292436 1 156 utg212_pilon exonerate:protein2genome:local gene 286198 286299 129 - . gene_id 0 ; sequence GL50803_37686-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 286198 286299 . - . utg212_pilon exonerate:protein2genome:local exon 286198 286299 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 286198 286299 129 - . alignment_id 0 ; Query GL50803_37686-t26_1-p1 ; Align 286300 1 102 utg47_pilon exonerate:protein2genome:local gene 767948 768079 133 + . gene_id 0 ; sequence GL50803_37692-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 767948 768079 . + . utg47_pilon exonerate:protein2genome:local exon 767948 768079 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 767948 768079 133 + . alignment_id 0 ; Query GL50803_37692-t26_1-p1 ; Align 767948 1 132 utg47_pilon exonerate:protein2genome:local gene 668289 668381 108 + . gene_id 0 ; sequence GL50803_37696-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 668289 668381 . + . utg47_pilon exonerate:protein2genome:local exon 668289 668381 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 668289 668381 108 + . alignment_id 0 ; Query GL50803_37696-t26_1-p1 ; Align 668289 5 93 utg47_pilon exonerate:protein2genome:local gene 683188 683517 464 + . gene_id 0 ; sequence GL50803_37700-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 683188 683517 . + . utg47_pilon exonerate:protein2genome:local exon 683188 683517 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 683188 683517 464 + . alignment_id 0 ; Query GL50803_37700-t26_1-p1 ; Align 683188 1 330 utg47_pilon exonerate:protein2genome:local gene 709067 709897 1261 + . gene_id 0 ; sequence GL50803_37711-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 709067 709897 . + . utg47_pilon exonerate:protein2genome:local exon 709067 709897 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 709067 709897 1261 + . alignment_id 0 ; Query GL50803_37711-t26_1-p1 ; Align 709067 1 831 utg47_pilon exonerate:protein2genome:local gene 731551 731694 143 + . gene_id 0 ; sequence GL50803_37720-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 731551 731694 . + . utg47_pilon exonerate:protein2genome:local exon 731551 731694 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 731551 731694 143 + . alignment_id 0 ; Query GL50803_37720-t26_1-p1 ; Align 731551 3 144 utg47_pilon exonerate:protein2genome:local gene 664339 664509 147 + . gene_id 0 ; sequence GL50803_37734-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 664339 664509 . + . utg47_pilon exonerate:protein2genome:local exon 664339 664509 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 664339 664509 147 + . alignment_id 0 ; Query GL50803_37734-t26_1-p1 ; Align 664339 1 171 utg47_pilon exonerate:protein2genome:local gene 679366 679491 145 + . gene_id 0 ; sequence GL50803_37736-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 679366 679491 . + . utg47_pilon exonerate:protein2genome:local exon 679366 679491 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 679366 679491 145 + . alignment_id 0 ; Query GL50803_37736-t26_1-p1 ; Align 679366 1 126 utg47_pilon exonerate:protein2genome:local gene 682359 682526 154 + . gene_id 0 ; sequence GL50803_37737-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 682359 682526 . + . utg47_pilon exonerate:protein2genome:local exon 682359 682526 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 682359 682526 154 + . alignment_id 0 ; Query GL50803_37737-t26_1-p1 ; Align 682359 1 168 utg47_pilon exonerate:protein2genome:local gene 699980 700168 169 + . gene_id 0 ; sequence GL50803_37739-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 699980 700168 . + . utg47_pilon exonerate:protein2genome:local exon 699980 700168 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 699980 700168 169 + . alignment_id 0 ; Query GL50803_37739-t26_1-p1 ; Align 699980 1 189 utg47_pilon exonerate:protein2genome:local gene 613503 613625 179 - . gene_id 0 ; sequence GL50803_37779-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 613503 613625 . - . utg47_pilon exonerate:protein2genome:local exon 613503 613625 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 613503 613625 179 - . alignment_id 0 ; Query GL50803_37779-t26_1-p1 ; Align 613626 1 123 utg47_pilon exonerate:protein2genome:local gene 600678 600932 246 - . gene_id 0 ; sequence GL50803_37781-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 600678 600932 . - . utg47_pilon exonerate:protein2genome:local exon 600678 600932 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 600678 600932 246 - . alignment_id 0 ; Query GL50803_37781-t26_1-p1 ; Align 600933 1 255 utg99_pilon exonerate:protein2genome:local gene 12326 12700 323 + . gene_id 0 ; sequence GL50803_37811-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 12326 12700 . + . utg99_pilon exonerate:protein2genome:local exon 12326 12700 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 12326 12700 323 + . alignment_id 0 ; Query GL50803_37811-t26_1-p1 ; Align 12326 1 375 utg349_pilon exonerate:protein2genome:local gene 1669360 1670121 588 - . gene_id 0 ; sequence GL50803_37812-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1669360 1670121 . - . utg349_pilon exonerate:protein2genome:local exon 1669360 1670121 . - . insertions 12 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1669360 1670121 588 - . alignment_id 0 ; Query GL50803_37812-t26_1-p1 ; Align 1670122 1 60 ; Align 1670050 21 690 utg64_pilon exonerate:protein2genome:local gene 612648 612731 114 - . gene_id 0 ; sequence GL50803_37826-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 612648 612731 . - . utg64_pilon exonerate:protein2genome:local exon 612648 612731 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 612648 612731 114 - . alignment_id 0 ; Query GL50803_37826-t26_1-p1 ; Align 612732 1 84 utg64_pilon exonerate:protein2genome:local gene 611572 611778 203 - . gene_id 0 ; sequence GL50803_37828-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 611572 611778 . - . utg64_pilon exonerate:protein2genome:local exon 611572 611778 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 611572 611778 203 - . alignment_id 0 ; Query GL50803_37828-t26_1-p1 ; Align 611779 1 207 utg64_pilon exonerate:protein2genome:local gene 611851 611973 127 - . gene_id 0 ; sequence GL50803_37843-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 611851 611973 . - . utg64_pilon exonerate:protein2genome:local exon 611851 611973 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 611851 611973 127 - . alignment_id 0 ; Query GL50803_37843-t26_1-p1 ; Align 611974 3 123 utg64_pilon exonerate:protein2genome:local gene 605799 605915 120 - . gene_id 0 ; sequence GL50803_37844-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 605799 605915 . - . utg64_pilon exonerate:protein2genome:local exon 605799 605915 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 605799 605915 120 - . alignment_id 0 ; Query GL50803_37844-t26_1-p1 ; Align 605916 1 117 utg731_pilon exonerate:protein2genome:local gene 1037013 1037183 112 - . gene_id 0 ; sequence GL50803_37854-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1037013 1037183 . - . utg731_pilon exonerate:protein2genome:local exon 1037013 1037183 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1037013 1037183 112 - . alignment_id 0 ; Query GL50803_37854-t26_1-p1 ; Align 1037184 1 171 utg349_pilon exonerate:protein2genome:local gene 733115 733666 723 + . gene_id 0 ; sequence GL50803_3786-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 733115 733666 . + . utg349_pilon exonerate:protein2genome:local exon 733115 733666 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 733115 733666 723 + . alignment_id 0 ; Query GL50803_3786-t26_1-p1 ; Align 733115 1 552 utg731_pilon exonerate:protein2genome:local gene 1059013 1059198 202 - . gene_id 0 ; sequence GL50803_37864-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1059013 1059198 . - . utg731_pilon exonerate:protein2genome:local exon 1059013 1059198 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1059013 1059198 202 - . alignment_id 0 ; Query GL50803_37864-t26_1-p1 ; Align 1059199 1 186 utg731_pilon exonerate:protein2genome:local gene 1042269 1042535 268 - . gene_id 0 ; sequence GL50803_37869-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1042269 1042535 . - . utg731_pilon exonerate:protein2genome:local exon 1042269 1042535 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1042269 1042535 268 - . alignment_id 0 ; Query GL50803_37869-t26_1-p1 ; Align 1042536 1 267 utg47_pilon exonerate:protein2genome:local gene 83528 83716 177 + . gene_id 0 ; sequence GL50803_37872-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 83528 83716 . + . utg47_pilon exonerate:protein2genome:local exon 83528 83716 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 83528 83716 177 + . alignment_id 0 ; Query GL50803_37872-t26_1-p1 ; Align 83528 3 189 utg731_pilon exonerate:protein2genome:local gene 1032930 1033067 164 - . gene_id 0 ; sequence GL50803_37873-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1032930 1033067 . - . utg731_pilon exonerate:protein2genome:local exon 1032930 1033067 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1032930 1033067 164 - . alignment_id 0 ; Query GL50803_37873-t26_1-p1 ; Align 1033068 1 138 utg731_pilon exonerate:protein2genome:local gene 1031540 1031680 154 - . gene_id 0 ; sequence GL50803_37874-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1031540 1031680 . - . utg731_pilon exonerate:protein2genome:local exon 1031540 1031680 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1031540 1031680 154 - . alignment_id 0 ; Query GL50803_37874-t26_1-p1 ; Align 1031681 1 141 utg731_pilon exonerate:protein2genome:local gene 1011591 1011803 239 - . gene_id 0 ; sequence GL50803_37876-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1011591 1011803 . - . utg731_pilon exonerate:protein2genome:local exon 1011591 1011803 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1011591 1011803 239 - . alignment_id 0 ; Query GL50803_37876-t26_1-p1 ; Align 1011804 1 213 utg349_pilon exonerate:protein2genome:local gene 1556211 1556339 100 + . gene_id 0 ; sequence GL50803_37884-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1556211 1556339 . + . utg349_pilon exonerate:protein2genome:local exon 1556211 1556339 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1556211 1556339 100 + . alignment_id 0 ; Query GL50803_37884-t26_1-p1 ; Align 1556211 1 129 utg99_pilon exonerate:protein2genome:local gene 281084 281296 190 - . gene_id 0 ; sequence GL50803_37900-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 281084 281296 . - . utg99_pilon exonerate:protein2genome:local exon 281084 281296 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 281084 281296 190 - . alignment_id 0 ; Query GL50803_37900-t26_1-p1 ; Align 281297 1 213 utg99_pilon exonerate:protein2genome:local gene 274636 275052 486 - . gene_id 0 ; sequence GL50803_37905-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 274636 275052 . - . utg99_pilon exonerate:protein2genome:local exon 274636 275052 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 274636 275052 486 - . alignment_id 0 ; Query GL50803_37905-t26_1-p1 ; Align 275053 3 417 utg99_pilon exonerate:protein2genome:local gene 270158 270505 533 - . gene_id 0 ; sequence GL50803_37907-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 270158 270505 . - . utg99_pilon exonerate:protein2genome:local exon 270158 270505 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 270158 270505 533 - . alignment_id 0 ; Query GL50803_37907-t26_1-p1 ; Align 270506 1 348 utg47_pilon exonerate:protein2genome:local gene 2018771 2019223 393 + . gene_id 0 ; sequence GL50803_37947-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2018771 2019223 . + . utg47_pilon exonerate:protein2genome:local exon 2018771 2019223 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2018771 2019223 393 + . alignment_id 0 ; Query GL50803_37947-t26_1-p1 ; Align 2018771 1 453 utg64_pilon exonerate:protein2genome:local gene 814463 815524 1074 - . gene_id 0 ; sequence GL50803_37950-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 814463 815524 . - . utg64_pilon exonerate:protein2genome:local exon 814463 815524 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 814463 815524 1074 - . alignment_id 0 ; Query GL50803_37950-t26_1-p1 ; Align 815525 1 1062 utg64_pilon exonerate:protein2genome:local gene 821506 822090 386 - . gene_id 0 ; sequence GL50803_37953-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 821506 822090 . - . utg64_pilon exonerate:protein2genome:local exon 821506 822090 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 821506 822090 386 - . alignment_id 0 ; Query GL50803_37953-t26_1-p1 ; Align 822091 2 585 utg64_pilon exonerate:protein2genome:local gene 799460 799738 272 - . gene_id 0 ; sequence GL50803_37954-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 799460 799738 . - . utg64_pilon exonerate:protein2genome:local exon 799460 799738 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 799460 799738 272 - . alignment_id 0 ; Query GL50803_37954-t26_1-p1 ; Align 799739 5 279 utg64_pilon exonerate:protein2genome:local gene 790805 790945 130 - . gene_id 0 ; sequence GL50803_37956-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 790805 790945 . - . utg64_pilon exonerate:protein2genome:local exon 790805 790945 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 790805 790945 130 - . alignment_id 0 ; Query GL50803_37956-t26_1-p1 ; Align 790946 1 141 utg64_pilon exonerate:protein2genome:local gene 775414 775638 185 - . gene_id 0 ; sequence GL50803_37959-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 775414 775638 . - . utg64_pilon exonerate:protein2genome:local exon 775414 775638 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 775414 775638 185 - . alignment_id 0 ; Query GL50803_37959-t26_1-p1 ; Align 775639 1 225 utg64_pilon exonerate:protein2genome:local gene 774331 774534 174 - . gene_id 0 ; sequence GL50803_37960-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 774331 774534 . - . utg64_pilon exonerate:protein2genome:local exon 774331 774534 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 774331 774534 174 - . alignment_id 0 ; Query GL50803_37960-t26_1-p1 ; Align 774535 1 204 utg64_pilon exonerate:protein2genome:local gene 492437 495652 4968 - . gene_id 0 ; sequence GL50803_37985-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 492437 495652 . - . utg64_pilon exonerate:protein2genome:local exon 492437 495652 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 492437 495652 4968 - . alignment_id 0 ; Query GL50803_37985-t26_1-p1 ; Align 495653 1 3216 utg64_pilon exonerate:protein2genome:local gene 527144 527416 211 - . gene_id 0 ; sequence GL50803_37989-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 527144 527416 . - . utg64_pilon exonerate:protein2genome:local exon 527144 527416 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 527144 527416 211 - . alignment_id 0 ; Query GL50803_37989-t26_1-p1 ; Align 527417 1 273 utg64_pilon exonerate:protein2genome:local gene 522907 523068 118 - . gene_id 0 ; sequence GL50803_37991-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 522907 523068 . - . utg64_pilon exonerate:protein2genome:local exon 522907 523068 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 522907 523068 118 - . alignment_id 0 ; Query GL50803_37991-t26_1-p1 ; Align 523069 1 162 utg731_pilon exonerate:protein2genome:local gene 780074 780214 170 - . gene_id 0 ; sequence GL50803_38005-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 780074 780214 . - . utg731_pilon exonerate:protein2genome:local exon 780074 780214 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 780074 780214 170 - . alignment_id 0 ; Query GL50803_38005-t26_1-p1 ; Align 780215 1 141 utg731_pilon exonerate:protein2genome:local gene 771221 771502 217 - . gene_id 0 ; sequence GL50803_38009-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 771221 771502 . - . utg731_pilon exonerate:protein2genome:local exon 771221 771502 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 771221 771502 217 - . alignment_id 0 ; Query GL50803_38009-t26_1-p1 ; Align 771503 1 282 utg308_pilon exonerate:protein2genome:local gene 418494 418625 122 + . gene_id 0 ; sequence GL50803_38019-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 418494 418625 . + . utg308_pilon exonerate:protein2genome:local exon 418494 418625 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 418494 418625 122 + . alignment_id 0 ; Query GL50803_38019-t26_1-p1 ; Align 418494 1 132 utg731_pilon exonerate:protein2genome:local gene 353060 353275 162 + . gene_id 0 ; sequence GL50803_38033-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 353060 353275 . + . utg731_pilon exonerate:protein2genome:local exon 353060 353275 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 353060 353275 162 + . alignment_id 0 ; Query GL50803_38033-t26_1-p1 ; Align 353060 1 216 utg731_pilon exonerate:protein2genome:local gene 381437 381886 375 + . gene_id 0 ; sequence GL50803_38040-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 381437 381886 . + . utg731_pilon exonerate:protein2genome:local exon 381437 381886 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 381437 381886 375 + . alignment_id 0 ; Query GL50803_38040-t26_1-p1 ; Align 381437 1 450 utg47_pilon exonerate:protein2genome:local gene 1373003 1373143 201 + . gene_id 0 ; sequence GL50803_38044-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1373003 1373143 . + . utg47_pilon exonerate:protein2genome:local exon 1373003 1373143 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1373003 1373143 201 + . alignment_id 0 ; Query GL50803_38044-t26_1-p1 ; Align 1373003 2 141 utg349_pilon exonerate:protein2genome:local gene 316876 317049 143 - . gene_id 0 ; sequence GL50803_38052-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 316876 317049 . - . utg349_pilon exonerate:protein2genome:local exon 316876 317049 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 316876 317049 143 - . alignment_id 0 ; Query GL50803_38052-t26_1-p1 ; Align 317050 1 174 utg349_pilon exonerate:protein2genome:local gene 307046 307153 121 - . gene_id 0 ; sequence GL50803_38056-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 307046 307153 . - . utg349_pilon exonerate:protein2genome:local exon 307046 307153 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 307046 307153 121 - . alignment_id 0 ; Query GL50803_38056-t26_1-p1 ; Align 307154 1 108 utg349_pilon exonerate:protein2genome:local gene 294334 294493 158 - . gene_id 0 ; sequence GL50803_38060-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 294334 294493 . - . utg349_pilon exonerate:protein2genome:local exon 294334 294493 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 294334 294493 158 - . alignment_id 0 ; Query GL50803_38060-t26_1-p1 ; Align 294494 2 120 ; Align 294373 42 39 utg349_pilon exonerate:protein2genome:local gene 321445 321909 462 - . gene_id 0 ; sequence GL50803_38078-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 321445 321909 . - . utg349_pilon exonerate:protein2genome:local exon 321445 321909 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 321445 321909 462 - . alignment_id 0 ; Query GL50803_38078-t26_1-p1 ; Align 321910 1 465 utg349_pilon exonerate:protein2genome:local gene 319855 320007 127 - . gene_id 0 ; sequence GL50803_38079-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 319855 320007 . - . utg349_pilon exonerate:protein2genome:local exon 319855 320007 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 319855 320007 127 - . alignment_id 0 ; Query GL50803_38079-t26_1-p1 ; Align 320008 2 153 utg349_pilon exonerate:protein2genome:local gene 309024 309158 141 - . gene_id 0 ; sequence GL50803_38083-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 309024 309158 . - . utg349_pilon exonerate:protein2genome:local exon 309024 309158 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 309024 309158 141 - . alignment_id 0 ; Query GL50803_38083-t26_1-p1 ; Align 309159 1 135 utg18_pilon exonerate:protein2genome:local gene 408326 412294 5490 + . gene_id 0 ; sequence GL50803_38104-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 408326 412294 . + . utg18_pilon exonerate:protein2genome:local exon 408326 412294 . + . insertions 6 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 408326 412294 5490 + . alignment_id 0 ; Query GL50803_38104-t26_1-p1 ; Align 408326 1 3687 ; Align 412019 1230 39 ; Align 412058 1244 237 utg64_pilon exonerate:protein2genome:local gene 585655 585789 108 - . gene_id 0 ; sequence GL50803_38125-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 585655 585789 . - . utg64_pilon exonerate:protein2genome:local exon 585655 585789 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 585655 585789 108 - . alignment_id 0 ; Query GL50803_38125-t26_1-p1 ; Align 585790 1 135 utg64_pilon exonerate:protein2genome:local gene 581936 582475 594 - . gene_id 0 ; sequence GL50803_38127-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 581936 582475 . - . utg64_pilon exonerate:protein2genome:local exon 581936 582475 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 581936 582475 594 - . alignment_id 0 ; Query GL50803_38127-t26_1-p1 ; Align 582476 1 540 utg64_pilon exonerate:protein2genome:local gene 577379 577558 224 - . gene_id 0 ; sequence GL50803_38128-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 577379 577558 . - . utg64_pilon exonerate:protein2genome:local exon 577379 577558 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 577379 577558 224 - . alignment_id 0 ; Query GL50803_38128-t26_1-p1 ; Align 577559 1 180 utg64_pilon exonerate:protein2genome:local gene 569133 569399 177 - . gene_id 0 ; sequence GL50803_38130-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 569133 569399 . - . utg64_pilon exonerate:protein2genome:local exon 569133 569399 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 569133 569399 177 - . alignment_id 0 ; Query GL50803_38130-t26_1-p1 ; Align 569400 1 267 utg64_pilon exonerate:protein2genome:local gene 580963 581208 259 - . gene_id 0 ; sequence GL50803_38134-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 580963 581208 . - . utg64_pilon exonerate:protein2genome:local exon 580963 581208 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 580963 581208 259 - . alignment_id 0 ; Query GL50803_38134-t26_1-p1 ; Align 581209 1 246 utg11_pilon exonerate:protein2genome:local gene 1151489 1151626 135 - . gene_id 0 ; sequence GL50803_38142-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1151489 1151626 . - . utg11_pilon exonerate:protein2genome:local exon 1151489 1151626 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1151489 1151626 135 - . alignment_id 0 ; Query GL50803_38142-t26_1-p1 ; Align 1151627 1 138 utg11_pilon exonerate:protein2genome:local gene 1128611 1128739 168 - . gene_id 0 ; sequence GL50803_38149-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1128611 1128739 . - . utg11_pilon exonerate:protein2genome:local exon 1128611 1128739 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1128611 1128739 168 - . alignment_id 0 ; Query GL50803_38149-t26_1-p1 ; Align 1128740 1 129 utg11_pilon exonerate:protein2genome:local gene 1118910 1119044 169 - . gene_id 0 ; sequence GL50803_38151-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1118910 1119044 . - . utg11_pilon exonerate:protein2genome:local exon 1118910 1119044 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1118910 1119044 169 - . alignment_id 0 ; Query GL50803_38151-t26_1-p1 ; Align 1119045 1 105 ; Align 1118937 36 27 utg11_pilon exonerate:protein2genome:local gene 1109577 1109708 151 - . gene_id 0 ; sequence GL50803_38154-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1109577 1109708 . - . utg11_pilon exonerate:protein2genome:local exon 1109577 1109708 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1109577 1109708 151 - . alignment_id 0 ; Query GL50803_38154-t26_1-p1 ; Align 1109709 1 132 utg11_pilon exonerate:protein2genome:local gene 1109124 1109273 230 - . gene_id 0 ; sequence GL50803_38155-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1109124 1109273 . - . utg11_pilon exonerate:protein2genome:local exon 1109124 1109273 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1109124 1109273 230 - . alignment_id 0 ; Query GL50803_38155-t26_1-p1 ; Align 1109274 1 150 utg11_pilon exonerate:protein2genome:local gene 1108875 1109036 208 - . gene_id 0 ; sequence GL50803_38156-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1108875 1109036 . - . utg11_pilon exonerate:protein2genome:local exon 1108875 1109036 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1108875 1109036 208 - . alignment_id 0 ; Query GL50803_38156-t26_1-p1 ; Align 1109037 1 162 utg11_pilon exonerate:protein2genome:local gene 1095997 1096155 112 - . gene_id 0 ; sequence GL50803_38161-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1095997 1096155 . - . utg11_pilon exonerate:protein2genome:local exon 1095997 1096155 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1095997 1096155 112 - . alignment_id 0 ; Query GL50803_38161-t26_1-p1 ; Align 1096156 1 159 utg64_pilon exonerate:protein2genome:local gene 84177 146874 156 + . gene_id 0 ; sequence GL50803_38163-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 84177 84326 . + . utg64_pilon exonerate:protein2genome:local exon 84177 84326 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 84327 84328 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 84327 146727 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 146726 146727 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 146728 146874 . + . utg64_pilon exonerate:protein2genome:local exon 146728 146874 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 84177 146874 156 + . alignment_id 0 ; Query GL50803_38163-t26_1-p1 ; Align 84177 15 150 ; Align 146728 65 147 utg11_pilon exonerate:protein2genome:local gene 1080891 1081034 145 - . gene_id 0 ; sequence GL50803_38165-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1080891 1081034 . - . utg11_pilon exonerate:protein2genome:local exon 1080891 1081034 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1080891 1081034 145 - . alignment_id 0 ; Query GL50803_38165-t26_1-p1 ; Align 1081035 1 144 utg11_pilon exonerate:protein2genome:local gene 1150861 1150980 166 - . gene_id 0 ; sequence GL50803_38172-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1150861 1150980 . - . utg11_pilon exonerate:protein2genome:local exon 1150861 1150980 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1150861 1150980 166 - . alignment_id 0 ; Query GL50803_38172-t26_1-p1 ; Align 1150981 1 120 utg11_pilon exonerate:protein2genome:local gene 1131714 1131953 284 - . gene_id 0 ; sequence GL50803_38176-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1131714 1131953 . - . utg11_pilon exonerate:protein2genome:local exon 1131714 1131953 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1131714 1131953 284 - . alignment_id 0 ; Query GL50803_38176-t26_1-p1 ; Align 1131954 1 240 utg11_pilon exonerate:protein2genome:local gene 1088119 1088394 256 - . gene_id 0 ; sequence GL50803_38184-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1088119 1088394 . - . utg11_pilon exonerate:protein2genome:local exon 1088119 1088394 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1088119 1088394 256 - . alignment_id 0 ; Query GL50803_38184-t26_1-p1 ; Align 1088395 1 276 utg11_pilon exonerate:protein2genome:local gene 1072936 1073130 150 - . gene_id 0 ; sequence GL50803_38186-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1072936 1073130 . - . utg11_pilon exonerate:protein2genome:local exon 1072936 1073130 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1072936 1073130 150 - . alignment_id 0 ; Query GL50803_38186-t26_1-p1 ; Align 1073131 1 195 utg18_pilon exonerate:protein2genome:local gene 131403 131534 173 + . gene_id 0 ; sequence GL50803_38187-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 131403 131534 . + . utg18_pilon exonerate:protein2genome:local exon 131403 131534 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 131403 131534 173 + . alignment_id 0 ; Query GL50803_38187-t26_1-p1 ; Align 131403 2 132 utg47_pilon exonerate:protein2genome:local gene 31199 31342 137 - . gene_id 0 ; sequence GL50803_38190-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 31199 31342 . - . utg47_pilon exonerate:protein2genome:local exon 31199 31342 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 31199 31342 137 - . alignment_id 0 ; Query GL50803_38190-t26_1-p1 ; Align 31343 5 144 utg47_pilon exonerate:protein2genome:local gene 2288972 2289079 104 + . gene_id 0 ; sequence GL50803_38196-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2288972 2289079 . + . utg47_pilon exonerate:protein2genome:local exon 2288972 2289079 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2288972 2289079 104 + . alignment_id 0 ; Query GL50803_38196-t26_1-p1 ; Align 2288972 3 108 utg47_pilon exonerate:protein2genome:local gene 2277928 2278050 149 + . gene_id 0 ; sequence GL50803_38202-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2277928 2278050 . + . utg47_pilon exonerate:protein2genome:local exon 2277928 2278050 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2277928 2278050 149 + . alignment_id 0 ; Query GL50803_38202-t26_1-p1 ; Align 2277928 1 123 utg99_pilon exonerate:protein2genome:local gene 395258 397333 3298 - . gene_id 0 ; sequence GL50803_3822-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 395258 397333 . - . utg99_pilon exonerate:protein2genome:local exon 395258 397333 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 395258 397333 3298 - . alignment_id 0 ; Query GL50803_3822-t26_1-p1 ; Align 397334 1 2076 utg11_pilon exonerate:protein2genome:local gene 125200 125316 146 + . gene_id 0 ; sequence GL50803_38221-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 125200 125316 . + . utg11_pilon exonerate:protein2genome:local exon 125200 125316 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 125200 125316 146 + . alignment_id 0 ; Query GL50803_38221-t26_1-p1 ; Align 125200 2 117 utg11_pilon exonerate:protein2genome:local gene 126957 127109 128 + . gene_id 0 ; sequence GL50803_38222-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 126957 127109 . + . utg11_pilon exonerate:protein2genome:local exon 126957 127109 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 126957 127109 128 + . alignment_id 0 ; Query GL50803_38222-t26_1-p1 ; Align 126957 1 48 ; Align 127005 18 105 utg11_pilon exonerate:protein2genome:local gene 137210 137404 239 + . gene_id 0 ; sequence GL50803_38229-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 137210 137404 . + . utg11_pilon exonerate:protein2genome:local exon 137210 137404 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 137210 137404 239 + . alignment_id 0 ; Query GL50803_38229-t26_1-p1 ; Align 137210 1 195 utg11_pilon exonerate:protein2genome:local gene 134333 134656 359 + . gene_id 0 ; sequence GL50803_38244-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 134333 134656 . + . utg11_pilon exonerate:protein2genome:local exon 134333 134656 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 134333 134656 359 + . alignment_id 0 ; Query GL50803_38244-t26_1-p1 ; Align 134333 3 324 utg731_pilon exonerate:protein2genome:local gene 1309345 1309461 149 - . gene_id 0 ; sequence GL50803_38248-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1309345 1309461 . - . utg731_pilon exonerate:protein2genome:local exon 1309345 1309461 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1309345 1309461 149 - . alignment_id 0 ; Query GL50803_38248-t26_1-p1 ; Align 1309462 1 117 utg731_pilon exonerate:protein2genome:local gene 1308841 1309056 176 - . gene_id 0 ; sequence GL50803_38249-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1308841 1309056 . - . utg731_pilon exonerate:protein2genome:local exon 1308841 1309056 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1308841 1309056 176 - . alignment_id 0 ; Query GL50803_38249-t26_1-p1 ; Align 1309057 11 216 utg731_pilon exonerate:protein2genome:local gene 1306803 1306943 157 - . gene_id 0 ; sequence GL50803_38250-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1306803 1306943 . - . utg731_pilon exonerate:protein2genome:local exon 1306803 1306943 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1306803 1306943 157 - . alignment_id 0 ; Query GL50803_38250-t26_1-p1 ; Align 1306944 1 141 utg731_pilon exonerate:protein2genome:local gene 1294862 1294957 131 - . gene_id 0 ; sequence GL50803_38251-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1294862 1294957 . - . utg731_pilon exonerate:protein2genome:local exon 1294862 1294957 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1294862 1294957 131 - . alignment_id 0 ; Query GL50803_38251-t26_1-p1 ; Align 1294958 4 96 utg731_pilon exonerate:protein2genome:local gene 1272495 1272617 126 - . gene_id 0 ; sequence GL50803_38261-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1272495 1272617 . - . utg731_pilon exonerate:protein2genome:local exon 1272495 1272617 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1272495 1272617 126 - . alignment_id 0 ; Query GL50803_38261-t26_1-p1 ; Align 1272618 1 123 utg731_pilon exonerate:protein2genome:local gene 314742 314873 130 + . gene_id 0 ; sequence GL50803_38270-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 314742 314873 . + . utg731_pilon exonerate:protein2genome:local exon 314742 314873 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 314742 314873 130 + . alignment_id 0 ; Query GL50803_38270-t26_1-p1 ; Align 314742 2 132 utg731_pilon exonerate:protein2genome:local gene 315040 315153 103 + . gene_id 0 ; sequence GL50803_38271-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 315040 315153 . + . utg731_pilon exonerate:protein2genome:local exon 315040 315153 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 315040 315153 103 + . alignment_id 0 ; Query GL50803_38271-t26_1-p1 ; Align 315040 1 114 utg731_pilon exonerate:protein2genome:local gene 315788 315898 100 + . gene_id 0 ; sequence GL50803_38272-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 315788 315898 . + . utg731_pilon exonerate:protein2genome:local exon 315788 315898 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 315788 315898 100 + . alignment_id 0 ; Query GL50803_38272-t26_1-p1 ; Align 315788 1 111 utg731_pilon exonerate:protein2genome:local gene 306894 308813 2744 + . gene_id 0 ; sequence GL50803_38275-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 306894 308813 . + . utg731_pilon exonerate:protein2genome:local exon 306894 308813 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 306894 308813 2744 + . alignment_id 0 ; Query GL50803_38275-t26_1-p1 ; Align 306894 1 1167 ; Align 308064 390 750 utg731_pilon exonerate:protein2genome:local gene 304224 304364 133 + . gene_id 0 ; sequence GL50803_38281-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 304224 304364 . + . utg731_pilon exonerate:protein2genome:local exon 304224 304364 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 304224 304364 133 + . alignment_id 0 ; Query GL50803_38281-t26_1-p1 ; Align 304224 9 141 utg47_pilon exonerate:protein2genome:local gene 1592364 1592528 113 + . gene_id 0 ; sequence GL50803_38298-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1592364 1592528 . + . utg47_pilon exonerate:protein2genome:local exon 1592364 1592528 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1592364 1592528 113 + . alignment_id 0 ; Query GL50803_38298-t26_1-p1 ; Align 1592364 1 165 utg349_pilon exonerate:protein2genome:local gene 392863 393045 232 + . gene_id 0 ; sequence GL50803_38324-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 392863 393045 . + . utg349_pilon exonerate:protein2genome:local exon 392863 393045 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 392863 393045 232 + . alignment_id 0 ; Query GL50803_38324-t26_1-p1 ; Align 392863 1 183 utg731_pilon exonerate:protein2genome:local gene 546755 546931 212 - . gene_id 0 ; sequence GL50803_38342-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 546755 546931 . - . utg731_pilon exonerate:protein2genome:local exon 546755 546931 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 546755 546931 212 - . alignment_id 0 ; Query GL50803_38342-t26_1-p1 ; Align 546932 8 30 ; Align 546902 20 147 utg731_pilon exonerate:protein2genome:local gene 648619 648885 259 - . gene_id 0 ; sequence GL50803_38351-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 648619 648885 . - . utg731_pilon exonerate:protein2genome:local exon 648619 648885 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 648619 648885 259 - . alignment_id 0 ; Query GL50803_38351-t26_1-p1 ; Align 648886 1 267 utg731_pilon exonerate:protein2genome:local gene 643002 643211 301 - . gene_id 0 ; sequence GL50803_38355-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 643002 643211 . - . utg731_pilon exonerate:protein2genome:local exon 643002 643211 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 643002 643211 301 - . alignment_id 0 ; Query GL50803_38355-t26_1-p1 ; Align 643212 1 210 utg731_pilon exonerate:protein2genome:local gene 617026 617193 241 - . gene_id 0 ; sequence GL50803_38359-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 617026 617193 . - . utg731_pilon exonerate:protein2genome:local exon 617026 617193 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 617026 617193 241 - . alignment_id 0 ; Query GL50803_38359-t26_1-p1 ; Align 617194 1 168 utg731_pilon exonerate:protein2genome:local gene 607441 607671 213 - . gene_id 0 ; sequence GL50803_38364-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 607441 607671 . - . utg731_pilon exonerate:protein2genome:local exon 607441 607671 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 607441 607671 213 - . alignment_id 0 ; Query GL50803_38364-t26_1-p1 ; Align 607672 8 15 ; Align 607657 14 216 utg731_pilon exonerate:protein2genome:local gene 605591 605822 237 - . gene_id 0 ; sequence GL50803_38365-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 605591 605822 . - . utg731_pilon exonerate:protein2genome:local exon 605591 605822 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 605591 605822 237 - . alignment_id 0 ; Query GL50803_38365-t26_1-p1 ; Align 605823 1 135 ; Align 605687 46 96 utg731_pilon exonerate:protein2genome:local gene 766667 766819 191 - . gene_id 0 ; sequence GL50803_38378-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 766667 766819 . - . utg731_pilon exonerate:protein2genome:local exon 766667 766819 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 766667 766819 191 - . alignment_id 0 ; Query GL50803_38378-t26_1-p1 ; Align 766820 1 153 utg731_pilon exonerate:protein2genome:local gene 724270 724518 196 - . gene_id 0 ; sequence GL50803_38387-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 724270 724518 . - . utg731_pilon exonerate:protein2genome:local exon 724270 724518 . - . insertions 0 ; deletions 8 utg731_pilon exonerate:protein2genome:local similarity 724270 724518 196 - . alignment_id 0 ; Query GL50803_38387-t26_1-p1 ; Align 724519 1 72 ; Align 724447 30 132 ; Align 724315 77 45 utg731_pilon exonerate:protein2genome:local gene 701185 703137 2680 - . gene_id 0 ; sequence GL50803_38394-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 701185 703137 . - . utg731_pilon exonerate:protein2genome:local exon 701185 703137 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 701185 703137 2680 - . alignment_id 0 ; Query GL50803_38394-t26_1-p1 ; Align 703138 1 1953 utg731_pilon exonerate:protein2genome:local gene 697221 697334 146 - . gene_id 0 ; sequence GL50803_38396-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 697221 697334 . - . utg731_pilon exonerate:protein2genome:local exon 697221 697334 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 697221 697334 146 - . alignment_id 0 ; Query GL50803_38396-t26_1-p1 ; Align 697335 1 114 utg731_pilon exonerate:protein2genome:local gene 616571 616795 216 - . gene_id 0 ; sequence GL50803_38412-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 616571 616795 . - . utg731_pilon exonerate:protein2genome:local exon 616571 616795 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 616571 616795 216 - . alignment_id 0 ; Query GL50803_38412-t26_1-p1 ; Align 616796 1 225 utg731_pilon exonerate:protein2genome:local gene 609867 610328 484 - . gene_id 0 ; sequence GL50803_38415-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 609867 610328 . - . utg731_pilon exonerate:protein2genome:local exon 609867 610328 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 609867 610328 484 - . alignment_id 0 ; Query GL50803_38415-t26_1-p1 ; Align 610329 5 462 utg731_pilon exonerate:protein2genome:local gene 550228 550467 190 - . gene_id 0 ; sequence GL50803_38425-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 550228 550467 . - . utg731_pilon exonerate:protein2genome:local exon 550228 550467 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 550228 550467 190 - . alignment_id 0 ; Query GL50803_38425-t26_1-p1 ; Align 550468 11 240 utg731_pilon exonerate:protein2genome:local gene 711577 711882 225 - . gene_id 0 ; sequence GL50803_38432-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 711577 711882 . - . utg731_pilon exonerate:protein2genome:local exon 711577 711882 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 711577 711882 225 - . alignment_id 0 ; Query GL50803_38432-t26_1-p1 ; Align 711883 8 141 ; Align 711742 56 165 utg99_pilon exonerate:protein2genome:local gene 41143 41352 189 - . gene_id 0 ; sequence GL50803_38444-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 41143 41352 . - . utg99_pilon exonerate:protein2genome:local exon 41143 41352 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 41143 41352 189 - . alignment_id 0 ; Query GL50803_38444-t26_1-p1 ; Align 41353 1 210 utg99_pilon exonerate:protein2genome:local gene 34304 34465 186 - . gene_id 0 ; sequence GL50803_38460-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 34304 34465 . - . utg99_pilon exonerate:protein2genome:local exon 34304 34465 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 34304 34465 186 - . alignment_id 0 ; Query GL50803_38460-t26_1-p1 ; Align 34466 1 162 utg731_pilon exonerate:protein2genome:local gene 508562 527350 23638 - . gene_id 0 ; sequence GL50803_38462-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 508562 527350 . - . utg731_pilon exonerate:protein2genome:local exon 508562 527350 . - . insertions 15 ; deletions 12 ; frameshifts 9 utg731_pilon exonerate:protein2genome:local similarity 508562 527350 23638 - . alignment_id 0 ; Query GL50803_38462-t26_1-p1 ; Align 527351 1570 228 ; Align 527121 1646 6 ; Align 527115 1649 3168 ; Align 523944 2705 6309 ; Align 517635 4811 84 ; Align 517551 4840 249 ; Align 517300 4924 447 ; Align 516853 5074 303 ; Align 516550 5178 732 ; Align 515809 5422 138 ; Align 515670 5468 2448 ; Align 513221 6284 366 ; Align 512854 6406 1992 ; Align 510860 7070 3 ; Align 510857 7072 1608 ; Align 509249 7609 414 ; Align 508832 7747 270 utg731_pilon exonerate:protein2genome:local gene 501219 501401 150 - . gene_id 0 ; sequence GL50803_38465-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 501219 501401 . - . utg731_pilon exonerate:protein2genome:local exon 501219 501401 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 501219 501401 150 - . alignment_id 0 ; Query GL50803_38465-t26_1-p1 ; Align 501402 1 183 utg731_pilon exonerate:protein2genome:local gene 498810 498971 192 - . gene_id 0 ; sequence GL50803_38475-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 498810 498971 . - . utg731_pilon exonerate:protein2genome:local exon 498810 498971 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 498810 498971 192 - . alignment_id 0 ; Query GL50803_38475-t26_1-p1 ; Align 498972 1 162 utg308_pilon exonerate:protein2genome:local gene 161717 161884 142 - . gene_id 0 ; sequence GL50803_38507-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 161717 161884 . - . utg308_pilon exonerate:protein2genome:local exon 161717 161884 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 161717 161884 142 - . alignment_id 0 ; Query GL50803_38507-t26_1-p1 ; Align 161885 28 168 utg308_pilon exonerate:protein2genome:local gene 277665 277796 107 - . gene_id 0 ; sequence GL50803_38516-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 277665 277796 . - . utg308_pilon exonerate:protein2genome:local exon 277665 277796 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 277665 277796 107 - . alignment_id 0 ; Query GL50803_38516-t26_1-p1 ; Align 277797 1 132 utg308_pilon exonerate:protein2genome:local gene 270098 275506 6113 - . gene_id 0 ; sequence GL50803_38517-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 270098 275506 . - . utg308_pilon exonerate:protein2genome:local exon 270098 275506 . - . insertions 18 ; deletions 5 utg308_pilon exonerate:protein2genome:local similarity 270098 275506 6113 - . alignment_id 0 ; Query GL50803_38517-t26_1-p1 ; Align 275507 2 1539 ; Align 273968 517 1320 ; Align 272639 957 210 ; Align 272420 1027 1497 ; Align 270923 1529 825 utg308_pilon exonerate:protein2genome:local gene 267480 269315 2110 - . gene_id 0 ; sequence GL50803_38519-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 267480 269315 . - . utg308_pilon exonerate:protein2genome:local exon 267480 269315 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 267480 269315 2110 - . alignment_id 0 ; Query GL50803_38519-t26_1-p1 ; Align 269316 1 1542 ; Align 267774 516 294 utg308_pilon exonerate:protein2genome:local gene 207881 208114 353 - . gene_id 0 ; sequence GL50803_38528-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 207881 208114 . - . utg308_pilon exonerate:protein2genome:local exon 207881 208114 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 207881 208114 353 - . alignment_id 0 ; Query GL50803_38528-t26_1-p1 ; Align 208115 1 234 utg308_pilon exonerate:protein2genome:local gene 253387 253545 177 - . gene_id 0 ; sequence GL50803_38547-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 253387 253545 . - . utg308_pilon exonerate:protein2genome:local exon 253387 253545 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 253387 253545 177 - . alignment_id 0 ; Query GL50803_38547-t26_1-p1 ; Align 253546 1 159 utg308_pilon exonerate:protein2genome:local gene 247916 248146 229 - . gene_id 0 ; sequence GL50803_38548-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 247916 248146 . - . utg308_pilon exonerate:protein2genome:local exon 247916 248146 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 247916 248146 229 - . alignment_id 0 ; Query GL50803_38548-t26_1-p1 ; Align 248147 1 231 utg64_pilon exonerate:protein2genome:local gene 304774 306231 1491 - . gene_id 0 ; sequence GL50803_3855-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 304774 306231 . - . utg64_pilon exonerate:protein2genome:local exon 304774 306231 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 304774 306231 1491 - . alignment_id 0 ; Query GL50803_3855-t26_1-p1 ; Align 306232 1 417 ; Align 305815 141 1041 utg308_pilon exonerate:protein2genome:local gene 217505 217660 167 - . gene_id 0 ; sequence GL50803_38553-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 217505 217660 . - . utg308_pilon exonerate:protein2genome:local exon 217505 217660 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 217505 217660 167 - . alignment_id 0 ; Query GL50803_38553-t26_1-p1 ; Align 217661 1 156 utg308_pilon exonerate:protein2genome:local gene 211795 212040 225 - . gene_id 0 ; sequence GL50803_38556-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 211795 212040 . - . utg308_pilon exonerate:protein2genome:local exon 211795 212040 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 211795 212040 225 - . alignment_id 0 ; Query GL50803_38556-t26_1-p1 ; Align 212041 1 246 utg731_pilon exonerate:protein2genome:local gene 1582204 1583199 611 - . gene_id 0 ; sequence GL50803_38572-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1582204 1583199 . - . utg731_pilon exonerate:protein2genome:local exon 1582204 1583199 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1582204 1583199 611 - . alignment_id 0 ; Query GL50803_38572-t26_1-p1 ; Align 1583200 6 555 ; Align 1582645 192 441 utg265_pilon exonerate:protein2genome:local gene 871889 884598 345 - . gene_id 0 ; sequence GL50803_38578-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 884538 884598 . - . utg265_pilon exonerate:protein2genome:local exon 884538 884598 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 884536 884537 . - . intron_id 1 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 872182 884537 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 872182 872183 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 871889 872181 . - . utg265_pilon exonerate:protein2genome:local exon 871889 872181 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 871889 884598 345 - . alignment_id 0 ; Query GL50803_38578-t26_1-p1 ; Align 884599 1 60 ; Align 872180 22 291 utg18_pilon exonerate:protein2genome:local gene 145769 146302 511 + . gene_id 0 ; sequence GL50803_38584-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 145769 146302 . + . utg18_pilon exonerate:protein2genome:local exon 145769 146302 . + . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 145769 146302 511 + . alignment_id 0 ; Query GL50803_38584-t26_1-p1 ; Align 145769 1 489 ; Align 146258 166 45 utg18_pilon exonerate:protein2genome:local gene 313311 314528 1898 - . gene_id 0 ; sequence GL50803_3861-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 313311 314528 . - . utg18_pilon exonerate:protein2genome:local exon 313311 314528 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 313311 314528 1898 - . alignment_id 0 ; Query GL50803_3861-t26_1-p1 ; Align 314529 1 1218 utg308_pilon exonerate:protein2genome:local gene 917082 917252 129 + . gene_id 0 ; sequence GL50803_38616-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 917082 917252 . + . utg308_pilon exonerate:protein2genome:local exon 917082 917252 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 917082 917252 129 + . alignment_id 0 ; Query GL50803_38616-t26_1-p1 ; Align 917082 1 120 ; Align 917202 42 51 utg308_pilon exonerate:protein2genome:local gene 951158 951427 211 + . gene_id 0 ; sequence GL50803_38625-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 951158 951427 . + . utg308_pilon exonerate:protein2genome:local exon 951158 951427 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 951158 951427 211 + . alignment_id 0 ; Query GL50803_38625-t26_1-p1 ; Align 951158 1 270 utg308_pilon exonerate:protein2genome:local gene 958819 959071 160 + . gene_id 0 ; sequence GL50803_38628-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 958819 959071 . + . utg308_pilon exonerate:protein2genome:local exon 958819 959071 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 958819 959071 160 + . alignment_id 0 ; Query GL50803_38628-t26_1-p1 ; Align 958819 1 60 ; Align 958880 21 192 utg308_pilon exonerate:protein2genome:local gene 913495 913635 229 + . gene_id 0 ; sequence GL50803_38637-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 913495 913635 . + . utg308_pilon exonerate:protein2genome:local exon 913495 913635 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 913495 913635 229 + . alignment_id 0 ; Query GL50803_38637-t26_1-p1 ; Align 913495 31 141 utg308_pilon exonerate:protein2genome:local gene 935870 935995 116 + . gene_id 0 ; sequence GL50803_38644-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 935870 935995 . + . utg308_pilon exonerate:protein2genome:local exon 935870 935995 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 935870 935995 116 + . alignment_id 0 ; Query GL50803_38644-t26_1-p1 ; Align 935870 1 126 utg308_pilon exonerate:protein2genome:local gene 941412 941618 282 + . gene_id 0 ; sequence GL50803_38649-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 941412 941618 . + . utg308_pilon exonerate:protein2genome:local exon 941412 941618 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 941412 941618 282 + . alignment_id 0 ; Query GL50803_38649-t26_1-p1 ; Align 941412 1 207 utg308_pilon exonerate:protein2genome:local gene 907774 907884 138 + . gene_id 0 ; sequence GL50803_38650-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 907774 907884 . + . utg308_pilon exonerate:protein2genome:local exon 907774 907884 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 907774 907884 138 + . alignment_id 0 ; Query GL50803_38650-t26_1-p1 ; Align 907774 1 111 utg308_pilon exonerate:protein2genome:local gene 948696 949028 279 + . gene_id 0 ; sequence GL50803_38651-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 948696 949028 . + . utg308_pilon exonerate:protein2genome:local exon 948696 949028 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 948696 949028 279 + . alignment_id 0 ; Query GL50803_38651-t26_1-p1 ; Align 948696 1 333 utg308_pilon exonerate:protein2genome:local gene 966383 966553 179 + . gene_id 0 ; sequence GL50803_38656-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 966383 966553 . + . utg308_pilon exonerate:protein2genome:local exon 966383 966553 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 966383 966553 179 + . alignment_id 0 ; Query GL50803_38656-t26_1-p1 ; Align 966383 1 171 utg308_pilon exonerate:protein2genome:local gene 739578 739850 401 - . gene_id 0 ; sequence GL50803_38661-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 739578 739850 . - . utg308_pilon exonerate:protein2genome:local exon 739578 739850 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 739578 739850 401 - . alignment_id 0 ; Query GL50803_38661-t26_1-p1 ; Align 739851 1 273 utg11_pilon exonerate:protein2genome:local gene 769113 770268 1130 - . gene_id 0 ; sequence GL50803_3867-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 769113 770268 . - . utg11_pilon exonerate:protein2genome:local exon 769113 770268 . - . insertions 0 ; deletions 3 ; frameshifts 4 utg11_pilon exonerate:protein2genome:local similarity 769113 770268 1130 - . alignment_id 0 ; Query GL50803_3867-t26_1-p1 ; Align 770269 1 60 ; Align 770205 21 111 ; Align 770094 59 891 ; Align 769203 358 90 utg308_pilon exonerate:protein2genome:local gene 701560 701694 114 - . gene_id 0 ; sequence GL50803_38671-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 701560 701694 . - . utg308_pilon exonerate:protein2genome:local exon 701560 701694 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 701560 701694 114 - . alignment_id 0 ; Query GL50803_38671-t26_1-p1 ; Align 701695 2 135 utg11_pilon exonerate:protein2genome:local gene 765473 768682 3820 + . gene_id 0 ; sequence GL50803_3868-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 765473 768682 . + . utg11_pilon exonerate:protein2genome:local exon 765473 768682 . + . insertions 3 ; deletions 6 ; frameshifts 6 utg11_pilon exonerate:protein2genome:local similarity 765473 768682 3820 + . alignment_id 0 ; Query GL50803_3868-t26_1-p1 ; Align 765473 1 45 ; Align 765519 16 729 ; Align 766251 259 75 ; Align 766328 285 120 ; Align 766450 326 912 ; Align 767363 631 615 ; Align 767978 839 705 utg308_pilon exonerate:protein2genome:local gene 722598 722960 373 - . gene_id 0 ; sequence GL50803_38689-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 722598 722960 . - . utg308_pilon exonerate:protein2genome:local exon 722598 722960 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 722598 722960 373 - . alignment_id 0 ; Query GL50803_38689-t26_1-p1 ; Align 722961 1 363 utg11_pilon exonerate:protein2genome:local gene 764545 765357 1144 + . gene_id 0 ; sequence GL50803_3869-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 764545 765357 . + . utg11_pilon exonerate:protein2genome:local exon 764545 765357 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 764545 765357 1144 + . alignment_id 0 ; Query GL50803_3869-t26_1-p1 ; Align 764545 1 813 utg308_pilon exonerate:protein2genome:local gene 706778 707041 183 - . gene_id 0 ; sequence GL50803_38692-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 706778 707041 . - . utg308_pilon exonerate:protein2genome:local exon 706778 707041 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 706778 707041 183 - . alignment_id 0 ; Query GL50803_38692-t26_1-p1 ; Align 707042 1 264 utg308_pilon exonerate:protein2genome:local gene 701936 702166 158 - . gene_id 0 ; sequence GL50803_38693-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 701936 702166 . - . utg308_pilon exonerate:protein2genome:local exon 701936 702166 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 701936 702166 158 - . alignment_id 0 ; Query GL50803_38693-t26_1-p1 ; Align 702167 1 231 utg308_pilon exonerate:protein2genome:local gene 744701 744808 156 - . gene_id 0 ; sequence GL50803_38701-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 744701 744808 . - . utg308_pilon exonerate:protein2genome:local exon 744701 744808 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 744701 744808 156 - . alignment_id 0 ; Query GL50803_38701-t26_1-p1 ; Align 744809 1 108 utg47_pilon exonerate:protein2genome:local gene 1652127 1652351 236 - . gene_id 0 ; sequence GL50803_38723-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1652127 1652351 . - . utg47_pilon exonerate:protein2genome:local exon 1652127 1652351 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1652127 1652351 236 - . alignment_id 0 ; Query GL50803_38723-t26_1-p1 ; Align 1652352 1 225 utg99_pilon exonerate:protein2genome:local gene 55724 55828 157 - . gene_id 0 ; sequence GL50803_38738-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 55724 55828 . - . utg99_pilon exonerate:protein2genome:local exon 55724 55828 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 55724 55828 157 - . alignment_id 0 ; Query GL50803_38738-t26_1-p1 ; Align 55829 1 105 utg99_pilon exonerate:protein2genome:local gene 79912 80031 102 - . gene_id 0 ; sequence GL50803_38744-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 79912 80031 . - . utg99_pilon exonerate:protein2genome:local exon 79912 80031 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 79912 80031 102 - . alignment_id 0 ; Query GL50803_38744-t26_1-p1 ; Align 80032 1 120 utg99_pilon exonerate:protein2genome:local gene 58846 59010 149 - . gene_id 0 ; sequence GL50803_38748-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 58846 59010 . - . utg99_pilon exonerate:protein2genome:local exon 58846 59010 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 58846 59010 149 - . alignment_id 0 ; Query GL50803_38748-t26_1-p1 ; Align 59011 1 165 utg731_pilon exonerate:protein2genome:local gene 416194 416358 187 + . gene_id 0 ; sequence GL50803_38762-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 416194 416358 . + . utg731_pilon exonerate:protein2genome:local exon 416194 416358 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 416194 416358 187 + . alignment_id 0 ; Query GL50803_38762-t26_1-p1 ; Align 416194 2 165 utg731_pilon exonerate:protein2genome:local gene 426632 426829 160 + . gene_id 0 ; sequence GL50803_38776-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 426632 426829 . + . utg731_pilon exonerate:protein2genome:local exon 426632 426829 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 426632 426829 160 + . alignment_id 0 ; Query GL50803_38776-t26_1-p1 ; Align 426632 11 198 utg11_pilon exonerate:protein2genome:local gene 1300090 1300221 126 - . gene_id 0 ; sequence GL50803_38789-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1300090 1300221 . - . utg11_pilon exonerate:protein2genome:local exon 1300090 1300221 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1300090 1300221 126 - . alignment_id 0 ; Query GL50803_38789-t26_1-p1 ; Align 1300222 7 132 utg11_pilon exonerate:protein2genome:local gene 1289302 1289457 138 - . gene_id 0 ; sequence GL50803_38794-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1289302 1289457 . - . utg11_pilon exonerate:protein2genome:local exon 1289302 1289457 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1289302 1289457 138 - . alignment_id 0 ; Query GL50803_38794-t26_1-p1 ; Align 1289458 6 156 utg11_pilon exonerate:protein2genome:local gene 1288830 1288943 131 - . gene_id 0 ; sequence GL50803_38795-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1288830 1288943 . - . utg11_pilon exonerate:protein2genome:local exon 1288830 1288943 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1288830 1288943 131 - . alignment_id 0 ; Query GL50803_38795-t26_1-p1 ; Align 1288944 1 114 utg11_pilon exonerate:protein2genome:local gene 1285892 1286092 187 - . gene_id 0 ; sequence GL50803_38796-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1285892 1286092 . - . utg11_pilon exonerate:protein2genome:local exon 1285892 1286092 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1285892 1286092 187 - . alignment_id 0 ; Query GL50803_38796-t26_1-p1 ; Align 1286093 10 201 utg11_pilon exonerate:protein2genome:local gene 1321108 1321248 131 - . gene_id 0 ; sequence GL50803_38812-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1321108 1321248 . - . utg11_pilon exonerate:protein2genome:local exon 1321108 1321248 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1321108 1321248 131 - . alignment_id 0 ; Query GL50803_38812-t26_1-p1 ; Align 1321249 3 141 utg11_pilon exonerate:protein2genome:local gene 1288771 1288923 168 - . gene_id 0 ; sequence GL50803_38823-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1288771 1288923 . - . utg11_pilon exonerate:protein2genome:local exon 1288771 1288923 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1288771 1288923 168 - . alignment_id 0 ; Query GL50803_38823-t26_1-p1 ; Align 1288924 1 153 utg11_pilon exonerate:protein2genome:local gene 1282495 1282716 217 - . gene_id 0 ; sequence GL50803_38826-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1282495 1282716 . - . utg11_pilon exonerate:protein2genome:local exon 1282495 1282716 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1282495 1282716 217 - . alignment_id 0 ; Query GL50803_38826-t26_1-p1 ; Align 1282717 1 222 utg11_pilon exonerate:protein2genome:local gene 1277689 1277901 227 - . gene_id 0 ; sequence GL50803_38827-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1277689 1277901 . - . utg11_pilon exonerate:protein2genome:local exon 1277689 1277901 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1277689 1277901 227 - . alignment_id 0 ; Query GL50803_38827-t26_1-p1 ; Align 1277902 1 213 utg47_pilon exonerate:protein2genome:local gene 1640882 1641403 814 - . gene_id 0 ; sequence GL50803_3883-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1640882 1641403 . - . utg47_pilon exonerate:protein2genome:local exon 1640882 1641403 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1640882 1641403 814 - . alignment_id 0 ; Query GL50803_3883-t26_1-p1 ; Align 1641404 1 522 utg11_pilon exonerate:protein2genome:local gene 1259346 1259453 131 - . gene_id 0 ; sequence GL50803_38830-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1259346 1259453 . - . utg11_pilon exonerate:protein2genome:local exon 1259346 1259453 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1259346 1259453 131 - . alignment_id 0 ; Query GL50803_38830-t26_1-p1 ; Align 1259454 6 108 utg47_pilon exonerate:protein2genome:local gene 1493185 1493352 128 - . gene_id 0 ; sequence GL50803_38846-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1493185 1493352 . - . utg47_pilon exonerate:protein2genome:local exon 1493185 1493352 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1493185 1493352 128 - . alignment_id 0 ; Query GL50803_38846-t26_1-p1 ; Align 1493353 1 168 utg47_pilon exonerate:protein2genome:local gene 1467153 1467425 317 - . gene_id 0 ; sequence GL50803_38853-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1467153 1467425 . - . utg47_pilon exonerate:protein2genome:local exon 1467153 1467425 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1467153 1467425 317 - . alignment_id 0 ; Query GL50803_38853-t26_1-p1 ; Align 1467426 3 273 utg47_pilon exonerate:protein2genome:local gene 1457118 1457243 147 - . gene_id 0 ; sequence GL50803_38856-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1457118 1457243 . - . utg47_pilon exonerate:protein2genome:local exon 1457118 1457243 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1457118 1457243 147 - . alignment_id 0 ; Query GL50803_38856-t26_1-p1 ; Align 1457244 1 126 utg47_pilon exonerate:protein2genome:local gene 1423906 1424001 102 - . gene_id 0 ; sequence GL50803_38862-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1423906 1424001 . - . utg47_pilon exonerate:protein2genome:local exon 1423906 1424001 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1423906 1424001 102 - . alignment_id 0 ; Query GL50803_38862-t26_1-p1 ; Align 1424002 2 96 utg47_pilon exonerate:protein2genome:local gene 1491621 1491770 143 - . gene_id 0 ; sequence GL50803_38872-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1491621 1491770 . - . utg47_pilon exonerate:protein2genome:local exon 1491621 1491770 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1491621 1491770 143 - . alignment_id 0 ; Query GL50803_38872-t26_1-p1 ; Align 1491771 1 150 utg47_pilon exonerate:protein2genome:local gene 1458241 1458348 105 - . gene_id 0 ; sequence GL50803_38881-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1458241 1458348 . - . utg47_pilon exonerate:protein2genome:local exon 1458241 1458348 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1458241 1458348 105 - . alignment_id 0 ; Query GL50803_38881-t26_1-p1 ; Align 1458349 1 108 utg47_pilon exonerate:protein2genome:local gene 1424383 1424529 118 - . gene_id 0 ; sequence GL50803_38886-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1424383 1424529 . - . utg47_pilon exonerate:protein2genome:local exon 1424383 1424529 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1424383 1424529 118 - . alignment_id 0 ; Query GL50803_38886-t26_1-p1 ; Align 1424530 1 147 utg64_pilon exonerate:protein2genome:local gene 51052 51315 308 + . gene_id 0 ; sequence GL50803_38895-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 51052 51315 . + . utg64_pilon exonerate:protein2genome:local exon 51052 51315 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 51052 51315 308 + . alignment_id 0 ; Query GL50803_38895-t26_1-p1 ; Align 51052 1 264 utg64_pilon exonerate:protein2genome:local gene 25855 25998 124 + . gene_id 0 ; sequence GL50803_38900-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 25855 25998 . + . utg64_pilon exonerate:protein2genome:local exon 25855 25998 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 25855 25998 124 + . alignment_id 0 ; Query GL50803_38900-t26_1-p1 ; Align 25855 1 144 utg349_pilon exonerate:protein2genome:local gene 1098561 1098749 234 - . gene_id 0 ; sequence GL50803_38901-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1098561 1098749 . - . utg349_pilon exonerate:protein2genome:local exon 1098561 1098749 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1098561 1098749 234 - . alignment_id 0 ; Query GL50803_38901-t26_1-p1 ; Align 1098750 9 66 ; Align 1098684 32 123 utg64_pilon exonerate:protein2genome:local gene 24811 24963 165 + . gene_id 0 ; sequence GL50803_38906-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 24811 24963 . + . utg64_pilon exonerate:protein2genome:local exon 24811 24963 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 24811 24963 165 + . alignment_id 0 ; Query GL50803_38906-t26_1-p1 ; Align 24811 3 153 utg64_pilon exonerate:protein2genome:local gene 26239 26436 168 + . gene_id 0 ; sequence GL50803_38907-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 26239 26436 . + . utg64_pilon exonerate:protein2genome:local exon 26239 26436 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 26239 26436 168 + . alignment_id 0 ; Query GL50803_38907-t26_1-p1 ; Align 26239 1 198 utg308_pilon exonerate:protein2genome:local gene 597795 597989 179 - . gene_id 0 ; sequence GL50803_38948-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 597795 597989 . - . utg308_pilon exonerate:protein2genome:local exon 597795 597989 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 597795 597989 179 - . alignment_id 0 ; Query GL50803_38948-t26_1-p1 ; Align 597990 1 195 utg212_pilon exonerate:protein2genome:local gene 438949 439557 688 - . gene_id 0 ; sequence GL50803_38952-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 438949 439557 . - . utg212_pilon exonerate:protein2genome:local exon 438949 439557 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 438949 439557 688 - . alignment_id 0 ; Query GL50803_38952-t26_1-p1 ; Align 439558 1 609 utg308_pilon exonerate:protein2genome:local gene 602077 602355 283 - . gene_id 0 ; sequence GL50803_38957-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 602077 602355 . - . utg308_pilon exonerate:protein2genome:local exon 602077 602355 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 602077 602355 283 - . alignment_id 0 ; Query GL50803_38957-t26_1-p1 ; Align 602356 1 279 utg99_pilon exonerate:protein2genome:local gene 153231 153452 312 - . gene_id 0 ; sequence GL50803_3896-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 153231 153452 . - . utg99_pilon exonerate:protein2genome:local exon 153231 153452 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 153231 153452 312 - . alignment_id 0 ; Query GL50803_3896-t26_1-p1 ; Align 153453 1 222 utg47_pilon exonerate:protein2genome:local gene 840514 840663 124 - . gene_id 0 ; sequence GL50803_38962-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 840514 840663 . - . utg47_pilon exonerate:protein2genome:local exon 840514 840663 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 840514 840663 124 - . alignment_id 0 ; Query GL50803_38962-t26_1-p1 ; Align 840664 1 150 utg47_pilon exonerate:protein2genome:local gene 466662 466787 150 + . gene_id 0 ; sequence GL50803_38990-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 466662 466787 . + . utg47_pilon exonerate:protein2genome:local exon 466662 466787 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 466662 466787 150 + . alignment_id 0 ; Query GL50803_38990-t26_1-p1 ; Align 466662 2 126 utg47_pilon exonerate:protein2genome:local gene 457903 458127 209 + . gene_id 0 ; sequence GL50803_39003-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 457903 458127 . + . utg47_pilon exonerate:protein2genome:local exon 457903 458127 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 457903 458127 209 + . alignment_id 0 ; Query GL50803_39003-t26_1-p1 ; Align 457903 6 225 utg64_pilon exonerate:protein2genome:local gene 268115 268507 270 - . gene_id 0 ; sequence GL50803_39014-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 268115 268507 . - . utg64_pilon exonerate:protein2genome:local exon 268115 268507 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 268115 268507 270 - . alignment_id 0 ; Query GL50803_39014-t26_1-p1 ; Align 268508 17 393 utg64_pilon exonerate:protein2genome:local gene 246411 246629 344 - . gene_id 0 ; sequence GL50803_39024-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 246411 246629 . - . utg64_pilon exonerate:protein2genome:local exon 246411 246629 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 246411 246629 344 - . alignment_id 0 ; Query GL50803_39024-t26_1-p1 ; Align 246630 1 219 utg11_pilon exonerate:protein2genome:local gene 1416751 1419834 4215 + . gene_id 0 ; sequence GL50803_3903-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1416751 1416891 . + . utg11_pilon exonerate:protein2genome:local exon 1416751 1416891 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1416892 1416893 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1416892 1416921 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1416920 1416921 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1416922 1419834 . + . utg11_pilon exonerate:protein2genome:local exon 1416922 1419834 . + . insertions 9 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 1416751 1419834 4215 + . alignment_id 0 ; Query GL50803_3903-t26_1-p1 ; Align 1416751 458 141 ; Align 1416922 505 27 ; Align 1416949 517 1398 ; Align 1418350 983 426 ; Align 1418782 1125 1053 utg64_pilon exonerate:protein2genome:local gene 230162 230401 233 - . gene_id 0 ; sequence GL50803_39030-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 230162 230401 . - . utg64_pilon exonerate:protein2genome:local exon 230162 230401 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 230162 230401 233 - . alignment_id 0 ; Query GL50803_39030-t26_1-p1 ; Align 230402 1 240 utg64_pilon exonerate:protein2genome:local gene 260002 260220 204 - . gene_id 0 ; sequence GL50803_39038-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 260002 260220 . - . utg64_pilon exonerate:protein2genome:local exon 260002 260220 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 260002 260220 204 - . alignment_id 0 ; Query GL50803_39038-t26_1-p1 ; Align 260221 1 219 utg64_pilon exonerate:protein2genome:local gene 247321 247572 281 - . gene_id 0 ; sequence GL50803_39044-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 247321 247572 . - . utg64_pilon exonerate:protein2genome:local exon 247321 247572 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 247321 247572 281 - . alignment_id 0 ; Query GL50803_39044-t26_1-p1 ; Align 247573 1 252 utg64_pilon exonerate:protein2genome:local gene 246496 246666 112 - . gene_id 0 ; sequence GL50803_39045-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 246496 246666 . - . utg64_pilon exonerate:protein2genome:local exon 246496 246666 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 246496 246666 112 - . alignment_id 0 ; Query GL50803_39045-t26_1-p1 ; Align 246667 1 171 utg64_pilon exonerate:protein2genome:local gene 163063 163206 111 - . gene_id 0 ; sequence GL50803_39056-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 163063 163206 . - . utg64_pilon exonerate:protein2genome:local exon 163063 163206 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 163063 163206 111 - . alignment_id 0 ; Query GL50803_39056-t26_1-p1 ; Align 163207 1 144 utg349_pilon exonerate:protein2genome:local gene 983306 983470 146 - . gene_id 0 ; sequence GL50803_39074-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 983306 983470 . - . utg349_pilon exonerate:protein2genome:local exon 983306 983470 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 983306 983470 146 - . alignment_id 0 ; Query GL50803_39074-t26_1-p1 ; Align 983471 1 165 utg349_pilon exonerate:protein2genome:local gene 1029113 1029376 218 - . gene_id 0 ; sequence GL50803_39077-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1029113 1029376 . - . utg349_pilon exonerate:protein2genome:local exon 1029113 1029376 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1029113 1029376 218 - . alignment_id 0 ; Query GL50803_39077-t26_1-p1 ; Align 1029377 1 264 utg349_pilon exonerate:protein2genome:local gene 1025121 1025327 198 - . gene_id 0 ; sequence GL50803_39082-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1025121 1025327 . - . utg349_pilon exonerate:protein2genome:local exon 1025121 1025327 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1025121 1025327 198 - . alignment_id 0 ; Query GL50803_39082-t26_1-p1 ; Align 1025328 1 207 utg349_pilon exonerate:protein2genome:local gene 1024988 1025182 227 - . gene_id 0 ; sequence GL50803_39083-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1024988 1025182 . - . utg349_pilon exonerate:protein2genome:local exon 1024988 1025182 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1024988 1025182 227 - . alignment_id 0 ; Query GL50803_39083-t26_1-p1 ; Align 1025183 3 195 utg349_pilon exonerate:protein2genome:local gene 1019812 1020108 315 - . gene_id 0 ; sequence GL50803_39084-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1019812 1020108 . - . utg349_pilon exonerate:protein2genome:local exon 1019812 1020108 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1019812 1020108 315 - . alignment_id 0 ; Query GL50803_39084-t26_1-p1 ; Align 1020109 1 297 utg11_pilon exonerate:protein2genome:local gene 910028 910174 134 - . gene_id 0 ; sequence GL50803_39086-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 910028 910174 . - . utg11_pilon exonerate:protein2genome:local exon 910028 910174 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 910028 910174 134 - . alignment_id 0 ; Query GL50803_39086-t26_1-p1 ; Align 910175 3 147 utg349_pilon exonerate:protein2genome:local gene 997598 997933 246 - . gene_id 0 ; sequence GL50803_39094-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 997598 997933 . - . utg349_pilon exonerate:protein2genome:local exon 997598 997933 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 997598 997933 246 - . alignment_id 0 ; Query GL50803_39094-t26_1-p1 ; Align 997934 1 336 utg349_pilon exonerate:protein2genome:local gene 979494 979826 268 - . gene_id 0 ; sequence GL50803_39098-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 979494 979826 . - . utg349_pilon exonerate:protein2genome:local exon 979494 979826 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 979494 979826 268 - . alignment_id 0 ; Query GL50803_39098-t26_1-p1 ; Align 979827 1 333 utg11_pilon exonerate:protein2genome:local gene 1166669 1167037 607 - . gene_id 0 ; sequence GL50803_3910-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1166669 1167037 . - . utg11_pilon exonerate:protein2genome:local exon 1166669 1167037 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1166669 1167037 607 - . alignment_id 0 ; Query GL50803_3910-t26_1-p1 ; Align 1167038 1 369 utg212_pilon exonerate:protein2genome:local gene 474542 475354 918 - . gene_id 0 ; sequence GL50803_39117-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 474542 475354 . - . utg212_pilon exonerate:protein2genome:local exon 474542 475354 . - . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 474542 475354 918 - . alignment_id 0 ; Query GL50803_39117-t26_1-p1 ; Align 475355 1 681 ; Align 474671 228 129 utg265_pilon exonerate:protein2genome:local gene 147327 147470 147 - . gene_id 0 ; sequence GL50803_39142-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 147327 147470 . - . utg265_pilon exonerate:protein2genome:local exon 147327 147470 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 147327 147470 147 - . alignment_id 0 ; Query GL50803_39142-t26_1-p1 ; Align 147471 5 144 utg265_pilon exonerate:protein2genome:local gene 143024 143263 293 - . gene_id 0 ; sequence GL50803_39143-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 143024 143263 . - . utg265_pilon exonerate:protein2genome:local exon 143024 143263 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 143024 143263 293 - . alignment_id 0 ; Query GL50803_39143-t26_1-p1 ; Align 143264 1 240 utg265_pilon exonerate:protein2genome:local gene 137351 137551 127 - . gene_id 0 ; sequence GL50803_39144-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 137351 137551 . - . utg265_pilon exonerate:protein2genome:local exon 137351 137551 . - . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 137351 137551 127 - . alignment_id 0 ; Query GL50803_39144-t26_1-p1 ; Align 137552 1 114 ; Align 137435 39 84 utg265_pilon exonerate:protein2genome:local gene 142728 142907 177 - . gene_id 0 ; sequence GL50803_39158-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 142728 142907 . - . utg265_pilon exonerate:protein2genome:local exon 142728 142907 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 142728 142907 177 - . alignment_id 0 ; Query GL50803_39158-t26_1-p1 ; Align 142908 1 180 utg47_pilon exonerate:protein2genome:local gene 1301015 1301188 226 - . gene_id 0 ; sequence GL50803_39176-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1301015 1301188 . - . utg47_pilon exonerate:protein2genome:local exon 1301015 1301188 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1301015 1301188 226 - . alignment_id 0 ; Query GL50803_39176-t26_1-p1 ; Align 1301189 1 174 utg47_pilon exonerate:protein2genome:local gene 1353942 1354160 320 + . gene_id 0 ; sequence GL50803_39181-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1353942 1354160 . + . utg47_pilon exonerate:protein2genome:local exon 1353942 1354160 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1353942 1354160 320 + . alignment_id 0 ; Query GL50803_39181-t26_1-p1 ; Align 1353942 1 219 utg47_pilon exonerate:protein2genome:local gene 1350372 1350518 150 + . gene_id 0 ; sequence GL50803_39189-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1350372 1350518 . + . utg47_pilon exonerate:protein2genome:local exon 1350372 1350518 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1350372 1350518 150 + . alignment_id 0 ; Query GL50803_39189-t26_1-p1 ; Align 1350372 2 147 utg47_pilon exonerate:protein2genome:local gene 1313689 1313826 116 - . gene_id 0 ; sequence GL50803_39195-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1313689 1313826 . - . utg47_pilon exonerate:protein2genome:local exon 1313689 1313826 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1313689 1313826 116 - . alignment_id 0 ; Query GL50803_39195-t26_1-p1 ; Align 1313827 1 138 utg731_pilon exonerate:protein2genome:local gene 1343436 1343621 174 - . gene_id 0 ; sequence GL50803_39197-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1343436 1343621 . - . utg731_pilon exonerate:protein2genome:local exon 1343436 1343621 . - . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1343436 1343621 174 - . alignment_id 0 ; Query GL50803_39197-t26_1-p1 ; Align 1343622 2 63 ; Align 1343556 23 63 ; Align 1343490 44 54 utg18_pilon exonerate:protein2genome:local gene 234149 236353 3239 + . gene_id 0 ; sequence GL50803_3920-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 234149 236353 . + . utg18_pilon exonerate:protein2genome:local exon 234149 236353 . + . insertions 0 ; deletions 3 utg18_pilon exonerate:protein2genome:local similarity 234149 236353 3239 + . alignment_id 0 ; Query GL50803_3920-t26_1-p1 ; Align 234149 1 534 ; Align 234683 182 1671 utg99_pilon exonerate:protein2genome:local gene 361664 361777 116 - . gene_id 0 ; sequence GL50803_39207-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 361664 361777 . - . utg99_pilon exonerate:protein2genome:local exon 361664 361777 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 361664 361777 116 - . alignment_id 0 ; Query GL50803_39207-t26_1-p1 ; Align 361778 1 114 utg99_pilon exonerate:protein2genome:local gene 339186 340202 1469 - . gene_id 0 ; sequence GL50803_39210-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 339186 340202 . - . utg99_pilon exonerate:protein2genome:local exon 339186 340202 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 339186 340202 1469 - . alignment_id 0 ; Query GL50803_39210-t26_1-p1 ; Align 340203 2 1017 utg349_pilon exonerate:protein2genome:local gene 104858 104992 132 + . gene_id 0 ; sequence GL50803_39237-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 104858 104992 . + . utg349_pilon exonerate:protein2genome:local exon 104858 104992 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 104858 104992 132 + . alignment_id 0 ; Query GL50803_39237-t26_1-p1 ; Align 104858 1 135 utg308_pilon exonerate:protein2genome:local gene 389559 389777 212 - . gene_id 0 ; sequence GL50803_39250-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 389559 389777 . - . utg308_pilon exonerate:protein2genome:local exon 389559 389777 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 389559 389777 212 - . alignment_id 0 ; Query GL50803_39250-t26_1-p1 ; Align 389778 1 219 utg308_pilon exonerate:protein2genome:local gene 386360 386467 145 - . gene_id 0 ; sequence GL50803_39254-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 386360 386467 . - . utg308_pilon exonerate:protein2genome:local exon 386360 386467 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 386360 386467 145 - . alignment_id 0 ; Query GL50803_39254-t26_1-p1 ; Align 386468 1 108 utg308_pilon exonerate:protein2genome:local gene 382243 382383 162 - . gene_id 0 ; sequence GL50803_39257-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 382243 382383 . - . utg308_pilon exonerate:protein2genome:local exon 382243 382383 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 382243 382383 162 - . alignment_id 0 ; Query GL50803_39257-t26_1-p1 ; Align 382384 1 141 utg308_pilon exonerate:protein2genome:local gene 377718 377840 170 - . gene_id 0 ; sequence GL50803_39260-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 377718 377840 . - . utg308_pilon exonerate:protein2genome:local exon 377718 377840 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 377718 377840 170 - . alignment_id 0 ; Query GL50803_39260-t26_1-p1 ; Align 377841 1 123 utg731_pilon exonerate:protein2genome:local gene 1523474 1523830 242 + . gene_id 0 ; sequence GL50803_39268-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1523474 1523830 . + . utg731_pilon exonerate:protein2genome:local exon 1523474 1523830 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1523474 1523830 242 + . alignment_id 0 ; Query GL50803_39268-t26_1-p1 ; Align 1523474 3 357 utg731_pilon exonerate:protein2genome:local gene 1524133 1524261 108 + . gene_id 0 ; sequence GL50803_39269-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1524133 1524261 . + . utg731_pilon exonerate:protein2genome:local exon 1524133 1524261 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1524133 1524261 108 + . alignment_id 0 ; Query GL50803_39269-t26_1-p1 ; Align 1524133 1 129 utg731_pilon exonerate:protein2genome:local gene 1523094 1523219 128 + . gene_id 0 ; sequence GL50803_39278-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1523094 1523219 . + . utg731_pilon exonerate:protein2genome:local exon 1523094 1523219 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1523094 1523219 128 + . alignment_id 0 ; Query GL50803_39278-t26_1-p1 ; Align 1523094 3 126 utg30034_pilon exonerate:protein2genome:local gene 34408 34680 125 - . gene_id 0 ; sequence GL50803_39305-t26_1-p1 ; gene_orientation . utg30034_pilon exonerate:protein2genome:local cds 34408 34680 . - . utg30034_pilon exonerate:protein2genome:local exon 34408 34680 . - . insertions 0 ; deletions 2 utg30034_pilon exonerate:protein2genome:local similarity 34408 34680 125 - . alignment_id 0 ; Query GL50803_39305-t26_1-p1 ; Align 34681 13 72 ; Align 34609 39 201 utg349_pilon exonerate:protein2genome:local gene 53703 68202 20123 + . gene_id 0 ; sequence GL50803_39312-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 53703 68202 . + . utg349_pilon exonerate:protein2genome:local exon 53703 68202 . + . insertions 3 ; deletions 7 ; frameshifts 13 utg349_pilon exonerate:protein2genome:local similarity 53703 68202 20123 + . alignment_id 0 ; Query GL50803_39312-t26_1-p1 ; Align 53703 1 1176 ; Align 54881 394 1644 ; Align 56526 942 1332 ; Align 57859 1386 630 ; Align 58490 1596 90 ; Align 58582 1627 519 ; Align 59102 1800 750 ; Align 59853 2050 1569 ; Align 61423 2573 453 ; Align 61877 2724 1062 ; Align 62940 3078 1365 ; Align 64305 3534 1287 ; Align 65592 3964 15 ; Align 65608 3969 999 ; Align 66607 4303 36 ; Align 66643 4316 471 ; Align 67117 4473 66 ; Align 67183 4496 1020 utg349_pilon exonerate:protein2genome:local gene 68943 69137 158 + . gene_id 0 ; sequence GL50803_39317-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 68943 69137 . + . utg349_pilon exonerate:protein2genome:local exon 68943 69137 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 68943 69137 158 + . alignment_id 0 ; Query GL50803_39317-t26_1-p1 ; Align 68943 1 195 utg18_pilon exonerate:protein2genome:local gene 367029 367196 160 + . gene_id 0 ; sequence GL50803_39330-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 367029 367196 . + . utg18_pilon exonerate:protein2genome:local exon 367029 367196 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 367029 367196 160 + . alignment_id 0 ; Query GL50803_39330-t26_1-p1 ; Align 367029 1 168 utg18_pilon exonerate:protein2genome:local gene 384172 384477 392 + . gene_id 0 ; sequence GL50803_39334-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 384172 384477 . + . utg18_pilon exonerate:protein2genome:local exon 384172 384477 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 384172 384477 392 + . alignment_id 0 ; Query GL50803_39334-t26_1-p1 ; Align 384172 1 306 utg18_pilon exonerate:protein2genome:local gene 333894 334127 242 + . gene_id 0 ; sequence GL50803_39336-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 333894 334127 . + . utg18_pilon exonerate:protein2genome:local exon 333894 334127 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 333894 334127 242 + . alignment_id 0 ; Query GL50803_39336-t26_1-p1 ; Align 333894 2 234 utg99_pilon exonerate:protein2genome:local gene 548363 548953 942 - . gene_id 0 ; sequence GL50803_3934-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 548363 548953 . - . utg99_pilon exonerate:protein2genome:local exon 548363 548953 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 548363 548953 942 - . alignment_id 0 ; Query GL50803_3934-t26_1-p1 ; Align 548954 1 591 utg18_pilon exonerate:protein2genome:local gene 358250 358390 166 + . gene_id 0 ; sequence GL50803_39340-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 358250 358390 . + . utg18_pilon exonerate:protein2genome:local exon 358250 358390 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 358250 358390 166 + . alignment_id 0 ; Query GL50803_39340-t26_1-p1 ; Align 358250 1 141 utg18_pilon exonerate:protein2genome:local gene 366240 366419 187 + . gene_id 0 ; sequence GL50803_39344-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 366240 366419 . + . utg18_pilon exonerate:protein2genome:local exon 366240 366419 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 366240 366419 187 + . alignment_id 0 ; Query GL50803_39344-t26_1-p1 ; Align 366240 1 180 utg18_pilon exonerate:protein2genome:local gene 331941 332156 246 + . gene_id 0 ; sequence GL50803_39345-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 331941 332156 . + . utg18_pilon exonerate:protein2genome:local exon 331941 332156 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 331941 332156 246 + . alignment_id 0 ; Query GL50803_39345-t26_1-p1 ; Align 331941 1 216 utg18_pilon exonerate:protein2genome:local gene 379115 379246 127 + . gene_id 0 ; sequence GL50803_39347-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 379115 379246 . + . utg18_pilon exonerate:protein2genome:local exon 379115 379246 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 379115 379246 127 + . alignment_id 0 ; Query GL50803_39347-t26_1-p1 ; Align 379115 1 132 utg47_pilon exonerate:protein2genome:local gene 1800113 1800313 258 + . gene_id 0 ; sequence GL50803_39373-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1800113 1800313 . + . utg47_pilon exonerate:protein2genome:local exon 1800113 1800313 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1800113 1800313 258 + . alignment_id 0 ; Query GL50803_39373-t26_1-p1 ; Align 1800113 1 201 utg47_pilon exonerate:protein2genome:local gene 1824680 1825000 372 + . gene_id 0 ; sequence GL50803_39394-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1824680 1825000 . + . utg47_pilon exonerate:protein2genome:local exon 1824680 1825000 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1824680 1825000 372 + . alignment_id 0 ; Query GL50803_39394-t26_1-p1 ; Align 1824680 1 321 utg47_pilon exonerate:protein2genome:local gene 1794161 1794322 133 + . gene_id 0 ; sequence GL50803_39398-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1794161 1794322 . + . utg47_pilon exonerate:protein2genome:local exon 1794161 1794322 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1794161 1794322 133 + . alignment_id 0 ; Query GL50803_39398-t26_1-p1 ; Align 1794161 3 162 utg308_pilon exonerate:protein2genome:local gene 888760 888924 126 + . gene_id 0 ; sequence GL50803_39412-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 888760 888924 . + . utg308_pilon exonerate:protein2genome:local exon 888760 888924 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 888760 888924 126 + . alignment_id 0 ; Query GL50803_39412-t26_1-p1 ; Align 888760 1 165 utg308_pilon exonerate:protein2genome:local gene 866055 866165 121 + . gene_id 0 ; sequence GL50803_39419-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 866055 866165 . + . utg308_pilon exonerate:protein2genome:local exon 866055 866165 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 866055 866165 121 + . alignment_id 0 ; Query GL50803_39419-t26_1-p1 ; Align 866055 1 111 utg99_pilon exonerate:protein2genome:local gene 451313 451906 579 + . gene_id 0 ; sequence GL50803_39432-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 451313 451906 . + . utg99_pilon exonerate:protein2genome:local exon 451313 451906 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 451313 451906 579 + . alignment_id 0 ; Query GL50803_39432-t26_1-p1 ; Align 451313 1 594 utg265_pilon exonerate:protein2genome:local gene 995388 995603 200 - . gene_id 0 ; sequence GL50803_39469-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 995388 995603 . - . utg265_pilon exonerate:protein2genome:local exon 995388 995603 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 995388 995603 200 - . alignment_id 0 ; Query GL50803_39469-t26_1-p1 ; Align 995604 2 216 utg265_pilon exonerate:protein2genome:local gene 964286 964402 112 - . gene_id 0 ; sequence GL50803_39475-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 964286 964402 . - . utg265_pilon exonerate:protein2genome:local exon 964286 964402 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 964286 964402 112 - . alignment_id 0 ; Query GL50803_39475-t26_1-p1 ; Align 964403 1 117 utg265_pilon exonerate:protein2genome:local gene 961646 961765 126 - . gene_id 0 ; sequence GL50803_39476-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 961646 961765 . - . utg265_pilon exonerate:protein2genome:local exon 961646 961765 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 961646 961765 126 - . alignment_id 0 ; Query GL50803_39476-t26_1-p1 ; Align 961766 2 120 utg265_pilon exonerate:protein2genome:local gene 958748 958978 218 - . gene_id 0 ; sequence GL50803_39477-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 958748 958978 . - . utg265_pilon exonerate:protein2genome:local exon 958748 958978 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 958748 958978 218 - . alignment_id 0 ; Query GL50803_39477-t26_1-p1 ; Align 958979 2 231 utg265_pilon exonerate:protein2genome:local gene 956093 956311 179 - . gene_id 0 ; sequence GL50803_39479-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 956093 956311 . - . utg265_pilon exonerate:protein2genome:local exon 956093 956311 . - . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 956093 956311 179 - . alignment_id 0 ; Query GL50803_39479-t26_1-p1 ; Align 956312 1 102 ; Align 956210 38 117 utg349_pilon exonerate:protein2genome:local gene 584860 585426 755 + . gene_id 0 ; sequence GL50803_3948-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 584860 585426 . + . utg349_pilon exonerate:protein2genome:local exon 584860 585426 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 584860 585426 755 + . alignment_id 0 ; Query GL50803_3948-t26_1-p1 ; Align 584860 1 567 utg265_pilon exonerate:protein2genome:local gene 951754 952165 605 - . gene_id 0 ; sequence GL50803_39483-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 951754 952165 . - . utg265_pilon exonerate:protein2genome:local exon 951754 952165 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 951754 952165 605 - . alignment_id 0 ; Query GL50803_39483-t26_1-p1 ; Align 952166 1 243 ; Align 951922 82 168 utg265_pilon exonerate:protein2genome:local gene 931540 931734 151 - . gene_id 0 ; sequence GL50803_39487-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 931540 931734 . - . utg265_pilon exonerate:protein2genome:local exon 931540 931734 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 931540 931734 151 - . alignment_id 0 ; Query GL50803_39487-t26_1-p1 ; Align 931735 21 195 utg265_pilon exonerate:protein2genome:local gene 965123 965263 125 - . gene_id 0 ; sequence GL50803_39493-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 965123 965263 . - . utg265_pilon exonerate:protein2genome:local exon 965123 965263 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 965123 965263 125 - . alignment_id 0 ; Query GL50803_39493-t26_1-p1 ; Align 965264 3 141 utg265_pilon exonerate:protein2genome:local gene 952252 952458 319 - . gene_id 0 ; sequence GL50803_39496-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 952252 952458 . - . utg265_pilon exonerate:protein2genome:local exon 952252 952458 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 952252 952458 319 - . alignment_id 0 ; Query GL50803_39496-t26_1-p1 ; Align 952459 1 207 utg349_pilon exonerate:protein2genome:local gene 583382 584785 1904 + . gene_id 0 ; sequence GL50803_3950-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 583382 584066 . + . utg349_pilon exonerate:protein2genome:local exon 583382 584066 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 584067 584068 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 584067 584102 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 584101 584102 . + . intron_id 0 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local cds 584103 584785 . + . utg349_pilon exonerate:protein2genome:local exon 584103 584785 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 583382 584785 1904 + . alignment_id 0 ; Query GL50803_3950-t26_1-p1 ; Align 583382 1 684 ; Align 584105 230 681 utg349_pilon exonerate:protein2genome:local gene 582455 583264 1326 - . gene_id 0 ; sequence GL50803_3951-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 582455 583264 . - . utg349_pilon exonerate:protein2genome:local exon 582455 583264 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 582455 583264 1326 - . alignment_id 0 ; Query GL50803_3951-t26_1-p1 ; Align 583265 6 810 utg265_pilon exonerate:protein2genome:local gene 736598 736696 143 - . gene_id 0 ; sequence GL50803_39513-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 736598 736696 . - . utg265_pilon exonerate:protein2genome:local exon 736598 736696 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 736598 736696 143 - . alignment_id 0 ; Query GL50803_39513-t26_1-p1 ; Align 736697 1 99 utg265_pilon exonerate:protein2genome:local gene 690264 690407 181 - . gene_id 0 ; sequence GL50803_39514-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 690264 690407 . - . utg265_pilon exonerate:protein2genome:local exon 690264 690407 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 690264 690407 181 - . alignment_id 0 ; Query GL50803_39514-t26_1-p1 ; Align 690408 1 144 utg265_pilon exonerate:protein2genome:local gene 688003 688302 246 - . gene_id 0 ; sequence GL50803_39515-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 688003 688302 . - . utg265_pilon exonerate:protein2genome:local exon 688003 688302 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 688003 688302 246 - . alignment_id 0 ; Query GL50803_39515-t26_1-p1 ; Align 688303 1 300 utg265_pilon exonerate:protein2genome:local gene 678173 678334 172 - . gene_id 0 ; sequence GL50803_39519-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 678173 678334 . - . utg265_pilon exonerate:protein2genome:local exon 678173 678334 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 678173 678334 172 - . alignment_id 0 ; Query GL50803_39519-t26_1-p1 ; Align 678335 1 162 utg265_pilon exonerate:protein2genome:local gene 734283 734645 298 - . gene_id 0 ; sequence GL50803_39524-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 734283 734645 . - . utg265_pilon exonerate:protein2genome:local exon 734283 734645 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 734283 734645 298 - . alignment_id 0 ; Query GL50803_39524-t26_1-p1 ; Align 734646 1 363 utg265_pilon exonerate:protein2genome:local gene 731954 732103 171 - . gene_id 0 ; sequence GL50803_39525-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 731954 732103 . - . utg265_pilon exonerate:protein2genome:local exon 731954 732103 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 731954 732103 171 - . alignment_id 0 ; Query GL50803_39525-t26_1-p1 ; Align 732104 1 150 utg265_pilon exonerate:protein2genome:local gene 709647 709985 318 - . gene_id 0 ; sequence GL50803_39528-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 709647 709985 . - . utg265_pilon exonerate:protein2genome:local exon 709647 709985 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 709647 709985 318 - . alignment_id 0 ; Query GL50803_39528-t26_1-p1 ; Align 709986 1 339 utg265_pilon exonerate:protein2genome:local gene 747810 748103 212 - . gene_id 0 ; sequence GL50803_39537-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 747810 748103 . - . utg265_pilon exonerate:protein2genome:local exon 747810 748103 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 747810 748103 212 - . alignment_id 0 ; Query GL50803_39537-t26_1-p1 ; Align 748104 1 294 utg265_pilon exonerate:protein2genome:local gene 419066 419281 183 - . gene_id 0 ; sequence GL50803_39547-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 419066 419281 . - . utg265_pilon exonerate:protein2genome:local exon 419066 419281 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 419066 419281 183 - . alignment_id 0 ; Query GL50803_39547-t26_1-p1 ; Align 419282 1 36 ; Align 419246 14 180 utg99_pilon exonerate:protein2genome:local gene 439745 441976 3161 - . gene_id 0 ; sequence GL50803_3957-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 439745 441976 . - . utg99_pilon exonerate:protein2genome:local exon 439745 441976 . - . insertions 9 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 439745 441976 3161 - . alignment_id 0 ; Query GL50803_3957-t26_1-p1 ; Align 441977 1 1089 ; Align 440882 364 18 ; Align 440861 370 1116 utg99_pilon exonerate:protein2genome:local gene 442156 443103 914 + . gene_id 0 ; sequence GL50803_3958-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 442156 443103 . + . utg99_pilon exonerate:protein2genome:local exon 442156 443103 . + . insertions 3 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 442156 443103 914 + . alignment_id 0 ; Query GL50803_3958-t26_1-p1 ; Align 442156 1 315 ; Align 442474 106 330 ; Align 442804 217 300 utg265_pilon exonerate:protein2genome:local gene 483435 483659 372 - . gene_id 0 ; sequence GL50803_39583-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 483435 483659 . - . utg265_pilon exonerate:protein2genome:local exon 483435 483659 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 483435 483659 372 - . alignment_id 0 ; Query GL50803_39583-t26_1-p1 ; Align 483660 1 225 utg265_pilon exonerate:protein2genome:local gene 450245 454150 5378 - . gene_id 0 ; sequence GL50803_39587-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 450245 454150 . - . utg265_pilon exonerate:protein2genome:local exon 450245 454150 . - . insertions 6 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 450245 454150 5378 - . alignment_id 0 ; Query GL50803_39587-t26_1-p1 ; Align 454151 1 294 ; Align 453854 99 1632 ; Align 452222 645 1605 ; Align 450614 1180 297 ; Align 450317 1280 72 utg265_pilon exonerate:protein2genome:local gene 451684 451896 112 - . gene_id 0 ; sequence GL50803_39588-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 451684 451896 . - . utg265_pilon exonerate:protein2genome:local exon 451684 451896 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 451684 451896 112 - . alignment_id 0 ; Query GL50803_39588-t26_1-p1 ; Align 451897 29 213 utg265_pilon exonerate:protein2genome:local gene 441939 442100 128 - . gene_id 0 ; sequence GL50803_39591-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 441939 442100 . - . utg265_pilon exonerate:protein2genome:local exon 441939 442100 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 441939 442100 128 - . alignment_id 0 ; Query GL50803_39591-t26_1-p1 ; Align 442101 1 162 utg1966_pilon exonerate:protein2genome:local gene 23162 23455 271 + . gene_id 0 ; sequence GL50803_39612-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 23162 23455 . + . utg1966_pilon exonerate:protein2genome:local exon 23162 23455 . + . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 23162 23455 271 + . alignment_id 0 ; Query GL50803_39612-t26_1-p1 ; Align 23162 1 294 utg11_pilon exonerate:protein2genome:local gene 708423 708578 151 + . gene_id 0 ; sequence GL50803_39621-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 708423 708578 . + . utg11_pilon exonerate:protein2genome:local exon 708423 708578 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 708423 708578 151 + . alignment_id 0 ; Query GL50803_39621-t26_1-p1 ; Align 708423 2 156 utg212_pilon exonerate:protein2genome:local gene 568721 568852 222 - . gene_id 0 ; sequence GL50803_39642-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 568721 568852 . - . utg212_pilon exonerate:protein2genome:local exon 568721 568852 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 568721 568852 222 - . alignment_id 0 ; Query GL50803_39642-t26_1-p1 ; Align 568853 1 132 utg99_pilon exonerate:protein2genome:local gene 386288 386431 213 + . gene_id 0 ; sequence GL50803_39681-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 386288 386431 . + . utg99_pilon exonerate:protein2genome:local exon 386288 386431 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 386288 386431 213 + . alignment_id 0 ; Query GL50803_39681-t26_1-p1 ; Align 386288 1 144 utg99_pilon exonerate:protein2genome:local gene 371221 371328 147 + . gene_id 0 ; sequence GL50803_39690-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 371221 371328 . + . utg99_pilon exonerate:protein2genome:local exon 371221 371328 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 371221 371328 147 + . alignment_id 0 ; Query GL50803_39690-t26_1-p1 ; Align 371221 1 108 utg731_pilon exonerate:protein2genome:local gene 1516692 1516937 201 - . gene_id 0 ; sequence GL50803_39713-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1516692 1516937 . - . utg731_pilon exonerate:protein2genome:local exon 1516692 1516937 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1516692 1516937 201 - . alignment_id 0 ; Query GL50803_39713-t26_1-p1 ; Align 1516938 3 246 utg731_pilon exonerate:protein2genome:local gene 1505639 1505902 256 - . gene_id 0 ; sequence GL50803_39717-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1505639 1505902 . - . utg731_pilon exonerate:protein2genome:local exon 1505639 1505902 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1505639 1505902 256 - . alignment_id 0 ; Query GL50803_39717-t26_1-p1 ; Align 1505903 1 264 utg731_pilon exonerate:protein2genome:local gene 1529107 1529277 159 - . gene_id 0 ; sequence GL50803_39726-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1529107 1529277 . - . utg731_pilon exonerate:protein2genome:local exon 1529107 1529277 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1529107 1529277 159 - . alignment_id 0 ; Query GL50803_39726-t26_1-p1 ; Align 1529278 1 171 utg349_pilon exonerate:protein2genome:local gene 1150156 1150797 1006 + . gene_id 0 ; sequence GL50803_3974-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1150156 1150797 . + . utg349_pilon exonerate:protein2genome:local exon 1150156 1150797 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1150156 1150797 1006 + . alignment_id 0 ; Query GL50803_3974-t26_1-p1 ; Align 1150156 1 513 ; Align 1150669 173 129 utg18_pilon exonerate:protein2genome:local gene 55981 56190 202 + . gene_id 0 ; sequence GL50803_39741-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 55981 56190 . + . utg18_pilon exonerate:protein2genome:local exon 55981 56190 . + . insertions 0 ; deletions 6 utg18_pilon exonerate:protein2genome:local similarity 55981 56190 202 + . alignment_id 0 ; Query GL50803_39741-t26_1-p1 ; Align 55981 1 120 ; Align 56101 44 57 ; Align 56158 66 33 utg349_pilon exonerate:protein2genome:local gene 1465845 1466138 251 + . gene_id 0 ; sequence GL50803_39749-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1465845 1466138 . + . utg349_pilon exonerate:protein2genome:local exon 1465845 1466138 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1465845 1466138 251 + . alignment_id 0 ; Query GL50803_39749-t26_1-p1 ; Align 1465845 3 294 utg18_pilon exonerate:protein2genome:local gene 49144 49296 140 + . gene_id 0 ; sequence GL50803_39750-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 49144 49296 . + . utg18_pilon exonerate:protein2genome:local exon 49144 49296 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 49144 49296 140 + . alignment_id 0 ; Query GL50803_39750-t26_1-p1 ; Align 49144 4 153 utg731_pilon exonerate:protein2genome:local gene 162749 163144 630 - . gene_id 0 ; sequence GL50803_39766-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 162749 163144 . - . utg731_pilon exonerate:protein2genome:local exon 162749 163144 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 162749 163144 630 - . alignment_id 0 ; Query GL50803_39766-t26_1-p1 ; Align 163145 1 396 utg349_pilon exonerate:protein2genome:local gene 1153171 1154193 1736 - . gene_id 0 ; sequence GL50803_3977-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1153171 1154193 . - . utg349_pilon exonerate:protein2genome:local exon 1153171 1154193 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1153171 1154193 1736 - . alignment_id 0 ; Query GL50803_3977-t26_1-p1 ; Align 1154194 1 1023 utg349_pilon exonerate:protein2genome:local gene 1154378 1154851 787 + . gene_id 0 ; sequence GL50803_3978-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1154378 1154851 . + . utg349_pilon exonerate:protein2genome:local exon 1154378 1154851 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1154378 1154851 787 + . alignment_id 0 ; Query GL50803_3978-t26_1-p1 ; Align 1154378 1 474 utg11_pilon exonerate:protein2genome:local gene 536965 537084 101 + . gene_id 0 ; sequence GL50803_39824-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 536965 537084 . + . utg11_pilon exonerate:protein2genome:local exon 536965 537084 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 536965 537084 101 + . alignment_id 0 ; Query GL50803_39824-t26_1-p1 ; Align 536965 9 120 utg11_pilon exonerate:protein2genome:local gene 1406848 1408635 2519 + . gene_id 0 ; sequence GL50803_3983-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1406848 1408635 . + . utg11_pilon exonerate:protein2genome:local exon 1406848 1408635 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1406848 1408635 2519 + . alignment_id 0 ; Query GL50803_3983-t26_1-p1 ; Align 1406848 1 1512 ; Align 1408360 506 207 ; Align 1408567 576 69 utg11_pilon exonerate:protein2genome:local gene 751014 755101 5735 + . gene_id 0 ; sequence GL50803_39843-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 751014 755101 . + . utg11_pilon exonerate:protein2genome:local exon 751014 755101 . + . insertions 0 ; deletions 6 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 751014 755101 5735 + . alignment_id 0 ; Query GL50803_39843-t26_1-p1 ; Align 751014 1 156 ; Align 751170 54 120 ; Align 751292 95 762 ; Align 752054 352 1677 ; Align 753731 912 1371 utg11_pilon exonerate:protein2genome:local gene 1405451 1406824 2156 - . gene_id 0 ; sequence GL50803_3985-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1405451 1406824 . - . utg11_pilon exonerate:protein2genome:local exon 1405451 1406824 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1405451 1406824 2156 - . alignment_id 0 ; Query GL50803_3985-t26_1-p1 ; Align 1406825 1 1374 utg47_pilon exonerate:protein2genome:local gene 431976 526072 2896 - . gene_id 0 ; sequence GL50803_39904-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 525964 526072 . - . utg47_pilon exonerate:protein2genome:local exon 525964 526072 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 525962 525963 . - . intron_id 1 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 434257 525963 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 434257 434258 . - . intron_id 0 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local cds 431976 434256 . - . utg47_pilon exonerate:protein2genome:local exon 431976 434256 . - . insertions 3 ; deletions 3 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 431976 526072 2896 - . alignment_id 0 ; Query GL50803_39904-t26_1-p1 ; Align 526073 4 108 ; Align 434255 41 165 ; Align 434087 96 417 ; Align 433670 237 129 ; Align 433539 280 6 ; Align 433533 283 1557 utg64_pilon exonerate:protein2genome:local gene 966177 968150 2970 - . gene_id 0 ; sequence GL50803_3993-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 966177 968150 . - . utg64_pilon exonerate:protein2genome:local exon 966177 968150 . - . insertions 0 ; deletions 5 utg64_pilon exonerate:protein2genome:local similarity 966177 968150 2970 - . alignment_id 0 ; Query GL50803_3993-t26_1-p1 ; Align 968151 1 453 ; Align 967698 154 72 ; Align 967626 179 837 ; Align 966789 460 612 utg47_pilon exonerate:protein2genome:local gene 211799 224956 17184 + . gene_id 0 ; sequence GL50803_39938-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 211799 218988 . + . utg47_pilon exonerate:protein2genome:local exon 211799 218988 . + . insertions 15 ; deletions 10 utg47_pilon exonerate:protein2genome:local splice5 218989 218990 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 218989 219018 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 219017 219018 . + . intron_id 0 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local cds 219019 224956 . + . utg47_pilon exonerate:protein2genome:local exon 219019 224956 . + . insertions 0 ; deletions 10 utg47_pilon exonerate:protein2genome:local similarity 211799 224956 17184 + . alignment_id 0 ; Query GL50803_39938-t26_1-p1 ; Align 211799 1928 1185 ; Align 212984 2327 264 ; Align 213257 2415 1632 ; Align 214889 2963 1902 ; Align 216791 3598 144 ; Align 216935 3647 333 ; Align 217271 3758 1281 ; Align 218555 4185 432 ; Align 219020 4330 615 ; Align 219635 4536 183 ; Align 219818 4598 207 ; Align 220025 4668 1809 ; Align 221834 5272 366 ; Align 222200 5397 654 ; Align 222854 5616 195 ; Align 223049 5682 333 ; Align 223382 5794 1575 utg64_pilon exonerate:protein2genome:local gene 968197 969135 1526 - . gene_id 0 ; sequence GL50803_3994-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 968197 969135 . - . utg64_pilon exonerate:protein2genome:local exon 968197 969135 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 968197 969135 1526 - . alignment_id 0 ; Query GL50803_3994-t26_1-p1 ; Align 969136 1 939 utg11_pilon exonerate:protein2genome:local gene 281769 283640 2539 - . gene_id 0 ; sequence GL50803_40005-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 281769 283640 . - . utg11_pilon exonerate:protein2genome:local exon 281769 283640 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 281769 283640 2539 - . alignment_id 0 ; Query GL50803_40005-t26_1-p1 ; Align 283641 2 1872 utg11_pilon exonerate:protein2genome:local gene 280969 281769 800 + . gene_id 0 ; sequence GL50803_40006-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 280969 281769 . + . utg11_pilon exonerate:protein2genome:local exon 280969 281769 . + . insertions 18 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 280969 281769 800 + . alignment_id 0 ; Query GL50803_40006-t26_1-p1 ; Align 280969 2 135 ; Align 281104 49 120 ; Align 281230 89 27 ; Align 281269 98 501 utg11_pilon exonerate:protein2genome:local gene 287812 288741 1232 - . gene_id 0 ; sequence GL50803_40007-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 287812 288741 . - . utg11_pilon exonerate:protein2genome:local exon 287812 288741 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 287812 288741 1232 - . alignment_id 0 ; Query GL50803_40007-t26_1-p1 ; Align 288742 1 930 utg11_pilon exonerate:protein2genome:local gene 301037 304297 4328 - . gene_id 0 ; sequence GL50803_40014-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 304046 304297 . - . utg11_pilon exonerate:protein2genome:local exon 304046 304297 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 304044 304045 . - . intron_id 1 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local intron 304007 304045 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 304007 304008 . - . intron_id 0 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local cds 301037 304006 . - . utg11_pilon exonerate:protein2genome:local exon 301037 304006 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 301037 304297 4328 - . alignment_id 0 ; Query GL50803_40014-t26_1-p1 ; Align 304298 1 252 ; Align 304007 85 537 ; Align 303467 264 2430 utg11_pilon exonerate:protein2genome:local gene 306071 308047 2615 - . gene_id 0 ; sequence GL50803_40016-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 306071 308047 . - . utg11_pilon exonerate:protein2genome:local exon 306071 308047 . - . insertions 12 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 306071 308047 2615 - . alignment_id 0 ; Query GL50803_40016-t26_1-p1 ; Align 308048 1 486 ; Align 307550 163 90 ; Align 307460 194 1389 utg11_pilon exonerate:protein2genome:local gene 1421465 1422925 2429 + . gene_id 0 ; sequence GL50803_40067-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1421465 1422925 . + . utg11_pilon exonerate:protein2genome:local exon 1421465 1422925 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1421465 1422925 2429 + . alignment_id 0 ; Query GL50803_40067-t26_1-p1 ; Align 1421465 1 1461 utg47_pilon exonerate:protein2genome:local gene 1057313 1058074 1277 - . gene_id 0 ; sequence GL50803_4007-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1057313 1058074 . - . utg47_pilon exonerate:protein2genome:local exon 1057313 1058074 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1057313 1058074 1277 - . alignment_id 0 ; Query GL50803_4007-t26_1-p1 ; Align 1058075 1 762 utg47_pilon exonerate:protein2genome:local gene 1058140 1058763 957 + . gene_id 0 ; sequence GL50803_4008-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1058140 1058763 . + . utg47_pilon exonerate:protein2genome:local exon 1058140 1058763 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1058140 1058763 957 + . alignment_id 0 ; Query GL50803_4008-t26_1-p1 ; Align 1058140 1 624 utg265_pilon exonerate:protein2genome:local gene 50715 52316 2155 - . gene_id 0 ; sequence GL50803_4016-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 50715 52316 . - . utg265_pilon exonerate:protein2genome:local exon 50715 52316 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 50715 52316 2155 - . alignment_id 0 ; Query GL50803_4016-t26_1-p1 ; Align 52317 1 1602 utg265_pilon exonerate:protein2genome:local gene 52352 54013 2472 - . gene_id 0 ; sequence GL50803_4017-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 52352 54013 . - . utg265_pilon exonerate:protein2genome:local exon 52352 54013 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 52352 54013 2472 - . alignment_id 0 ; Query GL50803_4017-t26_1-p1 ; Align 54014 1 1662 utg265_pilon exonerate:protein2genome:local gene 53965 55788 2775 + . gene_id 0 ; sequence GL50803_4018-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 53965 55788 . + . utg265_pilon exonerate:protein2genome:local exon 53965 55788 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 53965 55788 2775 + . alignment_id 0 ; Query GL50803_4018-t26_1-p1 ; Align 53965 5 1824 utg731_pilon exonerate:protein2genome:local gene 767058 767840 1051 + . gene_id 0 ; sequence GL50803_40224-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 767058 767840 . + . utg731_pilon exonerate:protein2genome:local exon 767058 767840 . + . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 767058 767840 1051 + . alignment_id 0 ; Query GL50803_40224-t26_1-p1 ; Align 767058 1 501 ; Align 767568 168 273 utg11_pilon exonerate:protein2genome:local gene 113560 116628 4088 - . gene_id 0 ; sequence GL50803_40228-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 113560 116628 . - . utg11_pilon exonerate:protein2genome:local exon 113560 116628 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 113560 116628 4088 - . alignment_id 0 ; Query GL50803_40228-t26_1-p1 ; Align 116629 1019 3069 utg18_pilon exonerate:protein2genome:local gene 139278 139574 444 + . gene_id 0 ; sequence GL50803_40244-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 139278 139574 . + . utg18_pilon exonerate:protein2genome:local exon 139278 139574 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 139278 139574 444 + . alignment_id 0 ; Query GL50803_40244-t26_1-p1 ; Align 139278 1 297 utg99_pilon exonerate:protein2genome:local gene 416805 418208 1634 + . gene_id 0 ; sequence GL50803_4026-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 416805 417908 . + . utg99_pilon exonerate:protein2genome:local exon 416805 417908 . + . insertions 0 ; deletions 2 utg99_pilon exonerate:protein2genome:local splice5 417909 417910 . + . intron_id 1 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 417909 418004 . + . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 418003 418004 . + . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 418005 418208 . + . utg99_pilon exonerate:protein2genome:local exon 418005 418208 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 416805 418208 1634 + . alignment_id 0 ; Query GL50803_4026-t26_1-p1 ; Align 416805 1 606 ; Align 417411 205 498 ; Align 418005 371 204 utg212_pilon exonerate:protein2genome:local gene 126372 209700 474 + . gene_id 0 ; sequence GL50803_40283-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 126372 126797 . + . utg212_pilon exonerate:protein2genome:local exon 126372 126797 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 126798 126799 . + . intron_id 1 ; splice_site "GT" utg212_pilon exonerate:protein2genome:local intron 126798 209616 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 209615 209616 . + . intron_id 0 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local cds 209617 209700 . + . utg212_pilon exonerate:protein2genome:local exon 209617 209700 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 126372 209700 474 + . alignment_id 0 ; Query GL50803_40283-t26_1-p1 ; Align 126372 2 426 ; Align 209617 144 84 utg11_pilon exonerate:protein2genome:local gene 1723341 1794069 239 - . gene_id 0 ; sequence GL50803_4033-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1793707 1794069 . - . utg11_pilon exonerate:protein2genome:local exon 1793707 1794069 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1793705 1793706 . - . intron_id 1 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 1723377 1793706 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1723377 1723378 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1723341 1723376 . - . utg11_pilon exonerate:protein2genome:local exon 1723341 1723376 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1723341 1794069 239 - . alignment_id 0 ; Query GL50803_4033-t26_1-p1 ; Align 1794070 1 363 ; Align 1723377 122 36 utg11_pilon exonerate:protein2genome:local gene 36207 36422 123 + . gene_id 0 ; sequence GL50803_40347-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 36207 36422 . + . utg11_pilon exonerate:protein2genome:local exon 36207 36422 . + . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 36207 36422 123 + . alignment_id 0 ; Query GL50803_40347-t26_1-p1 ; Align 36207 1 21 ; Align 36231 8 126 ; Align 36360 50 63 utg99_pilon exonerate:protein2genome:local gene 433301 437521 5143 - . gene_id 0 ; sequence GL50803_40369-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 433301 437521 . - . utg99_pilon exonerate:protein2genome:local exon 433301 437521 . - . insertions 6 ; deletions 11 utg99_pilon exonerate:protein2genome:local similarity 433301 437521 5143 - . alignment_id 0 ; Query GL50803_40369-t26_1-p1 ; Align 437522 1 51 ; Align 437471 21 42 ; Align 437429 38 825 ; Align 436601 313 780 ; Align 435818 573 87 ; Align 435731 605 1395 ; Align 434336 1071 600 ; Align 433736 1272 435 utg99_pilon exonerate:protein2genome:local gene 459754 464580 7646 - . gene_id 0 ; sequence GL50803_40376-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 459754 464580 . - . utg99_pilon exonerate:protein2genome:local exon 459754 464580 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 459754 464580 7646 - . alignment_id 0 ; Query GL50803_40376-t26_1-p1 ; Align 464581 1 4827 utg731_pilon exonerate:protein2genome:local gene 1465256 1466377 1659 + . gene_id 0 ; sequence GL50803_4038-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1465256 1466377 . + . utg731_pilon exonerate:protein2genome:local exon 1465256 1466377 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1465256 1466377 1659 + . alignment_id 0 ; Query GL50803_4038-t26_1-p1 ; Align 1465256 1 804 ; Align 1466063 269 315 utg731_pilon exonerate:protein2genome:local gene 1466776 1468860 3068 - . gene_id 0 ; sequence GL50803_4039-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1466776 1468860 . - . utg731_pilon exonerate:protein2genome:local exon 1466776 1468860 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1466776 1468860 3068 - . alignment_id 0 ; Query GL50803_4039-t26_1-p1 ; Align 1468861 1 2085 utg265_pilon exonerate:protein2genome:local gene 984152 987907 5298 + . gene_id 0 ; sequence GL50803_40390-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 984152 987907 . + . utg265_pilon exonerate:protein2genome:local exon 984152 987907 . + . insertions 6 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 984152 987907 5298 + . alignment_id 0 ; Query GL50803_40390-t26_1-p1 ; Align 984152 1 2160 ; Align 986318 721 273 ; Align 986591 814 1317 utg11_pilon exonerate:protein2genome:local gene 409465 412659 4504 + . gene_id 0 ; sequence GL50803_4043-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 409465 412659 . + . utg11_pilon exonerate:protein2genome:local exon 409465 412659 . + . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 409465 412659 4504 + . alignment_id 0 ; Query GL50803_4043-t26_1-p1 ; Align 409465 1 1521 ; Align 410992 508 1668 utg11_pilon exonerate:protein2genome:local gene 412707 415229 3671 + . gene_id 0 ; sequence GL50803_4044-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 412707 415229 . + . utg11_pilon exonerate:protein2genome:local exon 412707 415229 . + . insertions 6 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 412707 415229 3671 + . alignment_id 0 ; Query GL50803_4044-t26_1-p1 ; Align 412707 1 294 ; Align 413004 99 453 ; Align 413460 250 1119 ; Align 414579 624 651 utg11_pilon exonerate:protein2genome:local gene 415336 415701 533 + . gene_id 0 ; sequence GL50803_4046-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 415336 415701 . + . utg11_pilon exonerate:protein2genome:local exon 415336 415701 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 415336 415701 533 + . alignment_id 0 ; Query GL50803_4046-t26_1-p1 ; Align 415336 1 366 utg265_pilon exonerate:protein2genome:local gene 21931 36564 24052 + . gene_id 0 ; sequence GL50803_40496-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 21931 36564 . + . utg265_pilon exonerate:protein2genome:local exon 21931 36564 . + . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 21931 36564 24052 + . alignment_id 0 ; Query GL50803_40496-t26_1-p1 ; Align 21931 1 2484 ; Align 24418 829 12147 utg99_pilon exonerate:protein2genome:local gene 378397 379107 965 - . gene_id 0 ; sequence GL50803_40517-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 378397 379107 . - . utg99_pilon exonerate:protein2genome:local exon 378397 379107 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 378397 379107 965 - . alignment_id 0 ; Query GL50803_40517-t26_1-p1 ; Align 379108 26 711 utg99_pilon exonerate:protein2genome:local gene 385996 386760 1172 - . gene_id 0 ; sequence GL50803_40521-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 385996 386760 . - . utg99_pilon exonerate:protein2genome:local exon 385996 386760 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 385996 386760 1172 - . alignment_id 0 ; Query GL50803_40521-t26_1-p1 ; Align 386761 38 765 utg11_pilon exonerate:protein2genome:local gene 909334 1543473 2191 - . gene_id 0 ; sequence GL50803_40571-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1542590 1543473 . - . utg11_pilon exonerate:protein2genome:local exon 1542590 1543473 . - . insertions 18 ; deletions 6 utg11_pilon exonerate:protein2genome:local splice5 1542588 1542589 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1452426 1542589 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1452426 1452427 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1452230 1452425 . - . utg11_pilon exonerate:protein2genome:local exon 1452230 1452425 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1452228 1452229 . - . intron_id 2 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 1342483 1452229 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 1342483 1342484 . - . intron_id 1 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local cds 1342293 1342482 . - . utg11_pilon exonerate:protein2genome:local exon 1342293 1342482 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1342291 1342292 . - . intron_id 3 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1179900 1342292 . - . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 1179900 1179901 . - . intron_id 2 ; splice_site "TG" utg11_pilon exonerate:protein2genome:local cds 1179774 1179899 . - . utg11_pilon exonerate:protein2genome:local exon 1179774 1179899 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1179772 1179773 . - . intron_id 4 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1064719 1179773 . - . intron_id 4 utg11_pilon exonerate:protein2genome:local splice3 1064719 1064720 . - . intron_id 3 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1064467 1064718 . - . utg11_pilon exonerate:protein2genome:local exon 1064467 1064718 . - . insertions 6 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1064465 1064466 . - . intron_id 5 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1063410 1064466 . - . intron_id 5 utg11_pilon exonerate:protein2genome:local splice3 1063410 1063411 . - . intron_id 4 ; splice_site "TG" utg11_pilon exonerate:protein2genome:local cds 1063354 1063409 . - . utg11_pilon exonerate:protein2genome:local exon 1063354 1063409 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1063352 1063353 . - . intron_id 6 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local intron 939903 1063353 . - . intron_id 6 utg11_pilon exonerate:protein2genome:local splice3 939903 939904 . - . intron_id 5 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 939117 939902 . - . utg11_pilon exonerate:protein2genome:local exon 939117 939902 . - . insertions 0 ; deletions 5 utg11_pilon exonerate:protein2genome:local splice5 939115 939116 . - . intron_id 7 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 909478 939116 . - . intron_id 7 utg11_pilon exonerate:protein2genome:local splice3 909478 909479 . - . intron_id 6 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 909334 909477 . - . utg11_pilon exonerate:protein2genome:local exon 909334 909477 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 909334 1543473 2191 - . alignment_id 0 ; Query GL50803_40571-t26_1-p1 ; Align 1543474 6 78 ; Align 1543387 32 57 ; Align 1543330 52 15 ; Align 1543315 59 54 ; Align 1543258 77 48 ; Align 1543207 93 42 ; Align 1543165 109 228 ; Align 1542937 186 186 ; Align 1542748 248 156 ; Align 1452425 301 195 ; Align 1342483 366 114 ; Align 1342366 404 72 ; Align 1179898 429 102 ; Align 1179796 464 21 ; Align 1064717 472 27 ; Align 1064684 481 87 ; Align 1064597 511 129 ; Align 1063408 555 54 ; Align 939903 573 141 ; Align 939762 621 165 ; Align 939597 678 291 ; Align 939306 777 189 ; Align 909478 840 144 utg47_pilon exonerate:protein2genome:local gene 1499643 1500523 1199 - . gene_id 0 ; sequence GL50803_4059-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1499643 1500523 . - . utg47_pilon exonerate:protein2genome:local exon 1499643 1500523 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1499643 1500523 1199 - . alignment_id 0 ; Query GL50803_4059-t26_1-p1 ; Align 1500524 1 780 ; Align 1499742 261 9 ; Align 1499733 265 90 utg349_pilon exonerate:protein2genome:local gene 552697 836633 1108 + . gene_id 0 ; sequence GL50803_40591-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 552697 553475 . + . utg349_pilon exonerate:protein2genome:local exon 552697 553475 . + . insertions 3 ; deletions 3 utg349_pilon exonerate:protein2genome:local splice5 553476 553477 . + . intron_id 1 ; splice_site "GC" utg349_pilon exonerate:protein2genome:local intron 553476 651358 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 651357 651358 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 651359 651474 . + . utg349_pilon exonerate:protein2genome:local exon 651359 651474 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 651475 651476 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 651475 836583 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 836582 836583 . + . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 836584 836633 . + . utg349_pilon exonerate:protein2genome:local exon 836584 836633 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 552697 836633 1108 + . alignment_id 0 ; Query GL50803_40591-t26_1-p1 ; Align 552697 1 438 ; Align 553138 147 78 ; Align 553216 174 135 ; Align 553351 220 96 ; Align 553447 253 27 ; Align 651360 263 114 ; Align 836586 302 48 utg349_pilon exonerate:protein2genome:local gene 1237566 1435690 789 + . gene_id 0 ; sequence GL50803_40592-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1237566 1238125 . + . utg349_pilon exonerate:protein2genome:local exon 1237566 1238125 . + . insertions 3 ; deletions 4 utg349_pilon exonerate:protein2genome:local splice5 1238126 1238127 . + . intron_id 1 ; splice_site "CG" utg349_pilon exonerate:protein2genome:local intron 1238126 1435581 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1435580 1435581 . + . intron_id 0 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 1435582 1435690 . + . utg349_pilon exonerate:protein2genome:local exon 1435582 1435690 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1237566 1435690 789 + . alignment_id 0 ; Query GL50803_40592-t26_1-p1 ; Align 1237566 1 168 ; Align 1237737 57 219 ; Align 1237956 131 21 ; Align 1237977 141 147 ; Align 1435583 191 108 utg349_pilon exonerate:protein2genome:local gene 44776 131917 458 + . gene_id 0 ; sequence GL50803_40621-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 44776 44906 . + . utg349_pilon exonerate:protein2genome:local exon 44776 44906 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 44907 44908 . + . intron_id 1 ; splice_site "CG" utg349_pilon exonerate:protein2genome:local intron 44907 45988 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 45987 45988 . + . intron_id 0 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 45989 46100 . + . utg349_pilon exonerate:protein2genome:local exon 45989 46100 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 46101 46102 . + . intron_id 2 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 46101 131776 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 131775 131776 . + . intron_id 1 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 131777 131917 . + . utg349_pilon exonerate:protein2genome:local exon 131777 131917 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 44776 131917 458 + . alignment_id 0 ; Query GL50803_40621-t26_1-p1 ; Align 44776 1 129 ; Align 45990 45 111 ; Align 131777 82 141 utg64_pilon exonerate:protein2genome:local gene 1014163 1015449 1826 - . gene_id 0 ; sequence GL50803_4063-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1014163 1015449 . - . utg64_pilon exonerate:protein2genome:local exon 1014163 1015449 . - . insertions 0 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 1014163 1015449 1826 - . alignment_id 0 ; Query GL50803_4063-t26_1-p1 ; Align 1015450 1 555 ; Align 1014895 188 102 ; Align 1014793 223 630 utg212_pilon exonerate:protein2genome:local gene 14096 115880 567 + . gene_id 0 ; sequence GL50803_40630-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14096 14449 . + . utg212_pilon exonerate:protein2genome:local exon 14096 14449 . + . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local splice5 14450 14451 . + . intron_id 1 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local intron 14450 115739 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115738 115739 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115740 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115740 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14096 115880 567 + . alignment_id 0 ; Query GL50803_40630-t26_1-p1 ; Align 14096 5 30 ; Align 14126 16 324 ; Align 115740 124 141 utg64_pilon exonerate:protein2genome:local gene 1015601 1015849 389 - . gene_id 0 ; sequence GL50803_4064-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1015601 1015849 . - . utg64_pilon exonerate:protein2genome:local exon 1015601 1015849 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1015601 1015849 389 - . alignment_id 0 ; Query GL50803_4064-t26_1-p1 ; Align 1015850 1 249 utg349_pilon exonerate:protein2genome:local gene 679509 680048 674 + . gene_id 0 ; sequence GL50803_40692-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 679509 680048 . + . utg349_pilon exonerate:protein2genome:local exon 679509 680048 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 679509 680048 674 + . alignment_id 0 ; Query GL50803_40692-t26_1-p1 ; Align 679509 1 462 ; Align 679971 156 78 utg349_pilon exonerate:protein2genome:local gene 461433 464411 3312 - . gene_id 0 ; sequence GL50803_40747-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 461747 464411 . - . utg349_pilon exonerate:protein2genome:local exon 461747 464411 . - . insertions 3 ; deletions 2 utg349_pilon exonerate:protein2genome:local splice5 461745 461746 . - . intron_id 1 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local intron 461711 461746 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 461711 461712 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 461433 461710 . - . utg349_pilon exonerate:protein2genome:local exon 461433 461710 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 461433 464411 3312 - . alignment_id 0 ; Query GL50803_40747-t26_1-p1 ; Align 464412 1 1248 ; Align 463161 417 732 ; Align 462429 662 486 ; Align 461943 825 195 ; Align 461709 891 276 utg308_pilon exonerate:protein2genome:local gene 62359 62707 289 - . gene_id 0 ; sequence GL50803_4078-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 62359 62707 . - . utg308_pilon exonerate:protein2genome:local exon 62359 62707 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 62359 62707 289 - . alignment_id 0 ; Query GL50803_4078-t26_1-p1 ; Align 62708 1 210 ; Align 62497 71 36 ; Align 62461 84 102 utg47_pilon exonerate:protein2genome:local gene 928977 929784 1152 + . gene_id 0 ; sequence GL50803_40783-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 928977 929784 . + . utg47_pilon exonerate:protein2genome:local exon 928977 929784 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 928977 929784 1152 + . alignment_id 0 ; Query GL50803_40783-t26_1-p1 ; Align 928977 1 162 ; Align 929140 55 645 utg308_pilon exonerate:protein2genome:local gene 62801 64216 2384 - . gene_id 0 ; sequence GL50803_4079-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 62801 64216 . - . utg308_pilon exonerate:protein2genome:local exon 62801 64216 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 62801 64216 2384 - . alignment_id 0 ; Query GL50803_4079-t26_1-p1 ; Align 64217 1 1416 utg349_pilon exonerate:protein2genome:local gene 1249515 1250780 1243 - . gene_id 0 ; sequence GL50803_40793-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1249515 1250780 . - . utg349_pilon exonerate:protein2genome:local exon 1249515 1250780 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1249515 1250780 1243 - . alignment_id 0 ; Query GL50803_40793-t26_1-p1 ; Align 1250781 1 1266 utg308_pilon exonerate:protein2genome:local gene 64853 65029 314 + . gene_id 0 ; sequence GL50803_4081-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 64853 65029 . + . utg308_pilon exonerate:protein2genome:local exon 64853 65029 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 64853 65029 314 + . alignment_id 0 ; Query GL50803_4081-t26_1-p1 ; Align 64853 1 177 utg349_pilon exonerate:protein2genome:local gene 1476350 1477474 1928 - . gene_id 0 ; sequence GL50803_40817-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1476350 1477474 . - . utg349_pilon exonerate:protein2genome:local exon 1476350 1477474 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1476350 1477474 1928 - . alignment_id 0 ; Query GL50803_40817-t26_1-p1 ; Align 1477475 1 1125 utg308_pilon exonerate:protein2genome:local gene 64850 65047 157 - . gene_id 0 ; sequence GL50803_4082-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 64850 65047 . - . utg308_pilon exonerate:protein2genome:local exon 64850 65047 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 64850 65047 157 - . alignment_id 0 ; Query GL50803_4082-t26_1-p1 ; Align 65048 1 198 utg308_pilon exonerate:protein2genome:local gene 65078 66205 1460 - . gene_id 0 ; sequence GL50803_4083-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 65078 66205 . - . utg308_pilon exonerate:protein2genome:local exon 65078 66205 . - . insertions 9 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 65078 66205 1460 - . alignment_id 0 ; Query GL50803_4083-t26_1-p1 ; Align 66206 1 573 ; Align 65624 192 195 ; Align 65429 259 351 utg64_pilon exonerate:protein2genome:local gene 713012 720055 9157 - . gene_id 0 ; sequence GL50803_40831-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 719041 720055 . - . utg64_pilon exonerate:protein2genome:local exon 719041 720055 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 719039 719040 . - . intron_id 1 ; splice_site "AC" utg64_pilon exonerate:protein2genome:local intron 719011 719040 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 719011 719012 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 713012 719010 . - . utg64_pilon exonerate:protein2genome:local exon 713012 719010 . - . insertions 0 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 713012 720055 9157 - . alignment_id 0 ; Query GL50803_40831-t26_1-p1 ; Align 720056 1 1014 ; Align 719009 340 1110 ; Align 717899 711 4038 ; Align 713861 2058 654 ; Align 713207 2277 195 utg308_pilon exonerate:protein2genome:local gene 66272 67195 1431 + . gene_id 0 ; sequence GL50803_4084-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 66272 67195 . + . utg308_pilon exonerate:protein2genome:local exon 66272 67195 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 66272 67195 1431 + . alignment_id 0 ; Query GL50803_4084-t26_1-p1 ; Align 66272 1 924 utg731_pilon exonerate:protein2genome:local gene 1002157 1003935 1987 + . gene_id 0 ; sequence GL50803_40863-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1002157 1003935 . + . utg731_pilon exonerate:protein2genome:local exon 1002157 1003935 . + . insertions 3 ; deletions 7 utg731_pilon exonerate:protein2genome:local similarity 1002157 1003935 1987 + . alignment_id 0 ; Query GL50803_40863-t26_1-p1 ; Align 1002157 1 249 ; Align 1002409 84 186 ; Align 1002595 147 1071 ; Align 1003666 508 24 ; Align 1003690 518 246 utg731_pilon exonerate:protein2genome:local gene 909585 911882 2867 - . gene_id 0 ; sequence GL50803_40885-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 909585 911882 . - . utg731_pilon exonerate:protein2genome:local exon 909585 911882 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 909585 911882 2867 - . alignment_id 0 ; Query GL50803_40885-t26_1-p1 ; Align 911883 1 675 ; Align 911208 227 573 ; Align 910635 419 1050 utg731_pilon exonerate:protein2genome:local gene 835962 837827 2095 - . gene_id 0 ; sequence GL50803_40904-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 835962 837827 . - . utg731_pilon exonerate:protein2genome:local exon 835962 837827 . - . insertions 9 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 835962 837827 2095 - . alignment_id 0 ; Query GL50803_40904-t26_1-p1 ; Align 837828 346 174 ; Align 837654 405 249 ; Align 837405 489 660 ; Align 836739 709 528 ; Align 836211 886 111 ; Align 836097 923 135 utg99_pilon exonerate:protein2genome:local gene 403799 404704 1211 + . gene_id 0 ; sequence GL50803_40920-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 403799 404704 . + . utg99_pilon exonerate:protein2genome:local exon 403799 404704 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 403799 404704 1211 + . alignment_id 0 ; Query GL50803_40920-t26_1-p1 ; Align 403799 1 906 utg11_pilon exonerate:protein2genome:local gene 1603539 1604138 723 + . gene_id 0 ; sequence GL50803_4097-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1603539 1604138 . + . utg11_pilon exonerate:protein2genome:local exon 1603539 1604138 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1603539 1604138 723 + . alignment_id 0 ; Query GL50803_4097-t26_1-p1 ; Align 1603539 1 354 ; Align 1603893 120 246 utg308_pilon exonerate:protein2genome:local gene 523500 524456 1462 + . gene_id 0 ; sequence GL50803_40995-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 523500 524456 . + . utg308_pilon exonerate:protein2genome:local exon 523500 524456 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 523500 524456 1462 + . alignment_id 0 ; Query GL50803_40995-t26_1-p1 ; Align 523500 1 957 utg349_pilon exonerate:protein2genome:local gene 942311 943438 1636 + . gene_id 0 ; sequence GL50803_41118-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 942311 943438 . + . utg349_pilon exonerate:protein2genome:local exon 942311 943438 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 942311 943438 1636 + . alignment_id 0 ; Query GL50803_41118-t26_1-p1 ; Align 942311 1 372 ; Align 942686 125 753 utg349_pilon exonerate:protein2genome:local gene 464633 467740 3145 + . gene_id 0 ; sequence GL50803_41186-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 464633 467740 . + . utg349_pilon exonerate:protein2genome:local exon 464633 467740 . + . insertions 6 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 464633 467740 3145 + . alignment_id 0 ; Query GL50803_41186-t26_1-p1 ; Align 464633 1 534 ; Align 465170 179 240 ; Align 465410 260 1197 ; Align 466607 661 855 ; Align 467465 946 276 utg47_pilon exonerate:protein2genome:local gene 1940252 1944208 5867 + . gene_id 0 ; sequence GL50803_41212-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1940252 1944208 . + . utg47_pilon exonerate:protein2genome:local exon 1940252 1944208 . + . insertions 3 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1940252 1944208 5867 + . alignment_id 0 ; Query GL50803_41212-t26_1-p1 ; Align 1940252 1 1308 ; Align 1941560 438 417 ; Align 1941980 577 2229 utg47_pilon exonerate:protein2genome:local gene 91583 984547 1324 - . gene_id 0 ; sequence GL50803_41227-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 984407 984547 . - . utg47_pilon exonerate:protein2genome:local exon 984407 984547 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 984405 984406 . - . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 984160 984406 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 984160 984161 . - . intron_id 0 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 983942 984159 . - . utg47_pilon exonerate:protein2genome:local exon 983942 984159 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 983940 983941 . - . intron_id 2 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 830848 983941 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 830848 830849 . - . intron_id 1 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 830750 830847 . - . utg47_pilon exonerate:protein2genome:local exon 830750 830847 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 830748 830749 . - . intron_id 3 ; splice_site "TT" utg47_pilon exonerate:protein2genome:local intron 635455 830749 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 635455 635456 . - . intron_id 2 ; splice_site "TG" utg47_pilon exonerate:protein2genome:local cds 635305 635454 . - . utg47_pilon exonerate:protein2genome:local exon 635305 635454 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 635303 635304 . - . intron_id 4 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 443705 635304 . - . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 443705 443706 . - . intron_id 3 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 443690 443704 . - . utg47_pilon exonerate:protein2genome:local exon 443690 443704 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 443688 443689 . - . intron_id 5 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 246368 443689 . - . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 246368 246369 . - . intron_id 4 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 246351 246367 . - . utg47_pilon exonerate:protein2genome:local exon 246351 246367 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 246349 246350 . - . intron_id 6 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 185252 246350 . - . intron_id 6 utg47_pilon exonerate:protein2genome:local splice3 185252 185253 . - . intron_id 5 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 184405 185251 . - . utg47_pilon exonerate:protein2genome:local exon 184405 185251 . - . insertions 12 ; deletions 3 utg47_pilon exonerate:protein2genome:local splice5 184403 184404 . - . intron_id 7 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 91675 184404 . - . intron_id 7 utg47_pilon exonerate:protein2genome:local splice3 91675 91676 . - . intron_id 6 ; splice_site "CG" utg47_pilon exonerate:protein2genome:local cds 91583 91674 . - . utg47_pilon exonerate:protein2genome:local exon 91583 91674 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 91583 984547 1324 - . alignment_id 0 ; Query GL50803_41227-t26_1-p1 ; Align 984548 14 141 ; Align 984160 61 78 ; Align 984082 90 138 ; Align 830847 137 96 ; Align 635453 170 84 ; Align 635369 199 63 ; Align 443703 221 12 ; Align 246366 226 15 ; Align 185252 231 132 ; Align 185117 275 99 ; Align 185015 308 450 ; Align 184565 459 72 ; Align 184493 485 42 ; Align 184445 499 39 ; Align 91673 513 90 utg349_pilon exonerate:protein2genome:local gene 948363 949793 2183 - . gene_id 0 ; sequence GL50803_4125-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 948363 949793 . - . utg349_pilon exonerate:protein2genome:local exon 948363 949793 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 948363 949793 2183 - . alignment_id 0 ; Query GL50803_4125-t26_1-p1 ; Align 949794 1 1212 ; Align 948579 405 216 utg308_pilon exonerate:protein2genome:local gene 478569 484325 7166 - . gene_id 0 ; sequence GL50803_41258-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 483227 484325 . - . utg308_pilon exonerate:protein2genome:local exon 483227 484325 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 483225 483226 . - . intron_id 1 ; splice_site "TT" utg308_pilon exonerate:protein2genome:local intron 483197 483226 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 483197 483198 . - . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 478569 483196 . - . utg308_pilon exonerate:protein2genome:local exon 478569 483196 . - . insertions 6 ; deletions 10 utg308_pilon exonerate:protein2genome:local similarity 478569 484325 7166 - . alignment_id 0 ; Query GL50803_41258-t26_1-p1 ; Align 484326 1 1098 ; Align 483195 368 9 ; Align 483186 372 630 ; Align 482553 582 45 ; Align 482508 598 1689 ; Align 480819 1163 816 ; Align 480003 1437 249 ; Align 479754 1521 375 ; Align 479379 1648 57 ; Align 479322 1668 339 ; Align 478980 1781 411 utg18_pilon exonerate:protein2genome:local gene 21141 24750 3794 + . gene_id 0 ; sequence GL50803_41288-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 21141 24229 . + . utg18_pilon exonerate:protein2genome:local exon 21141 24229 . + . insertions 12 ; deletions 0 ; frameshifts 4 utg18_pilon exonerate:protein2genome:local splice5 24230 24231 . + . intron_id 1 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 24230 24259 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 24258 24259 . + . intron_id 0 ; splice_site "TG" utg18_pilon exonerate:protein2genome:local cds 24260 24750 . + . utg18_pilon exonerate:protein2genome:local exon 24260 24750 . + . insertions 0 ; deletions 5 utg18_pilon exonerate:protein2genome:local similarity 21141 24750 3794 + . alignment_id 0 ; Query GL50803_41288-t26_1-p1 ; Align 21141 1 1533 ; Align 22677 512 132 ; Align 22810 556 477 ; Align 23289 715 108 ; Align 23398 751 96 ; Align 23497 783 324 ; Align 23824 891 321 ; Align 24148 998 81 ; Align 24262 1026 9 ; Align 24271 1032 369 ; Align 24640 1157 111 utg265_pilon exonerate:protein2genome:local gene 639341 645724 7354 - . gene_id 0 ; sequence GL50803_41304-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 645279 645724 . - . utg265_pilon exonerate:protein2genome:local exon 645279 645724 . - . insertions 3 ; deletions 1 utg265_pilon exonerate:protein2genome:local splice5 645277 645278 . - . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 645216 645278 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 645216 645217 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 643556 645215 . - . utg265_pilon exonerate:protein2genome:local exon 643556 645215 . - . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local splice5 643554 643555 . - . intron_id 2 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 643526 643555 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 643526 643527 . - . intron_id 1 ; splice_site "AT" utg265_pilon exonerate:protein2genome:local cds 639341 643525 . - . utg265_pilon exonerate:protein2genome:local exon 639341 643525 . - . insertions 0 ; deletions 7 utg265_pilon exonerate:protein2genome:local similarity 639341 645724 7354 - . alignment_id 0 ; Query GL50803_41304-t26_1-p1 ; Align 645725 419 273 ; Align 645452 511 141 ; Align 645308 558 27 ; Align 645215 568 1614 ; Align 643601 1109 45 ; Align 643526 1124 918 ; Align 642608 1431 507 ; Align 642101 1602 1344 ; Align 640757 2051 1110 ; Align 639647 2424 306 utg265_pilon exonerate:protein2genome:local gene 615504 617170 1933 + . gene_id 0 ; sequence GL50803_41311-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 615504 617170 . + . utg265_pilon exonerate:protein2genome:local exon 615504 617170 . + . insertions 0 ; deletions 5 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 615504 617170 1933 + . alignment_id 0 ; Query GL50803_41311-t26_1-p1 ; Align 615504 1 897 ; Align 616403 301 147 ; Align 616550 354 621 utg11_pilon exonerate:protein2genome:local gene 389953 557361 524 + . gene_id 0 ; sequence GL50803_41349-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 389953 390176 . + . utg11_pilon exonerate:protein2genome:local exon 389953 390176 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 390177 390178 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 390177 557195 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 557194 557195 . + . intron_id 0 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local cds 557196 557361 . + . utg11_pilon exonerate:protein2genome:local exon 557196 557361 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 389953 557361 524 + . alignment_id 0 ; Query GL50803_41349-t26_1-p1 ; Align 389953 1 222 ; Align 557197 76 165 utg18_pilon exonerate:protein2genome:local gene 123948 125912 2777 - . gene_id 0 ; sequence GL50803_41369-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 123948 125912 . - . utg18_pilon exonerate:protein2genome:local exon 123948 125912 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 123948 125912 2777 - . alignment_id 0 ; Query GL50803_41369-t26_1-p1 ; Align 125913 1 1965 utg11_pilon exonerate:protein2genome:local gene 325831 483689 107 + . gene_id 0 ; sequence GL50803_4140-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 325831 325914 . + . utg11_pilon exonerate:protein2genome:local exon 325831 325914 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 325915 325916 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 325915 483593 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 483592 483593 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 483594 483689 . + . utg11_pilon exonerate:protein2genome:local exon 483594 483689 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 325831 483689 107 + . alignment_id 0 ; Query GL50803_4140-t26_1-p1 ; Align 325831 183 84 ; Align 483594 211 96 utg349_pilon exonerate:protein2genome:local gene 44527 131917 774 + . gene_id 0 ; sequence GL50803_41401-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 44527 45076 . + . utg349_pilon exonerate:protein2genome:local exon 44527 45076 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local splice5 45077 45078 . + . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 45077 131825 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 131824 131825 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 131826 131917 . + . utg349_pilon exonerate:protein2genome:local exon 131826 131917 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 44527 131917 774 + . alignment_id 0 ; Query GL50803_41401-t26_1-p1 ; Align 44527 1 84 ; Align 44611 31 465 ; Align 131828 187 90 utg265_pilon exonerate:protein2genome:local gene 796738 802339 6009 - . gene_id 0 ; sequence GL50803_41451-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 801175 802339 . - . utg265_pilon exonerate:protein2genome:local exon 801175 802339 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local splice5 801173 801174 . - . intron_id 1 ; splice_site "AA" utg265_pilon exonerate:protein2genome:local intron 801103 801174 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 801103 801104 . - . intron_id 0 ; splice_site "AA" utg265_pilon exonerate:protein2genome:local cds 800628 801102 . - . utg265_pilon exonerate:protein2genome:local exon 800628 801102 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local splice5 800626 800627 . - . intron_id 2 ; splice_site "AT" utg265_pilon exonerate:protein2genome:local intron 800553 800627 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 800553 800554 . - . intron_id 1 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local cds 796738 800552 . - . utg265_pilon exonerate:protein2genome:local exon 796738 800552 . - . insertions 9 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 796738 802339 6009 - . alignment_id 0 ; Query GL50803_41451-t26_1-p1 ; Align 802340 2 42 ; Align 802297 16 1122 ; Align 801103 390 333 ; Align 800770 502 141 ; Align 800551 550 2421 ; Align 798130 1358 378 ; Align 797746 1484 666 ; Align 797080 1709 60 ; Align 797017 1729 279 utg265_pilon exonerate:protein2genome:local gene 860473 863853 4274 - . gene_id 0 ; sequence GL50803_41467-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 860473 863853 . - . utg265_pilon exonerate:protein2genome:local exon 860473 863853 . - . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 860473 863853 4274 - . alignment_id 0 ; Query GL50803_41467-t26_1-p1 ; Align 863854 1 621 ; Align 863230 208 711 ; Align 862516 445 2043 utg349_pilon exonerate:protein2genome:local gene 1236505 1450175 1835 + . gene_id 0 ; sequence GL50803_41472-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1236505 1237305 . + . utg349_pilon exonerate:protein2genome:local exon 1236505 1237305 . + . insertions 12 ; deletions 0 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local splice5 1237306 1237307 . + . intron_id 1 ; splice_site "CA" utg349_pilon exonerate:protein2genome:local intron 1237306 1434467 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1434466 1434467 . + . intron_id 0 ; splice_site "AA" utg349_pilon exonerate:protein2genome:local cds 1434468 1434512 . + . utg349_pilon exonerate:protein2genome:local exon 1434468 1434512 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1434513 1434514 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1434513 1434806 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1434805 1434806 . + . intron_id 1 ; splice_site "TG" utg349_pilon exonerate:protein2genome:local cds 1434807 1435609 . + . utg349_pilon exonerate:protein2genome:local exon 1434807 1435609 . + . insertions 15 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1435610 1435611 . + . intron_id 3 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 1435610 1450079 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 1450078 1450079 . + . intron_id 2 ; splice_site "CG" utg349_pilon exonerate:protein2genome:local cds 1450080 1450175 . + . utg349_pilon exonerate:protein2genome:local exon 1450080 1450175 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1236505 1450175 1835 + . alignment_id 0 ; Query GL50803_41472-t26_1-p1 ; Align 1236505 15 114 ; Align 1236625 53 414 ; Align 1237045 191 159 ; Align 1237206 244 99 ; Align 1434470 278 42 ; Align 1434809 293 483 ; Align 1435295 454 63 ; Align 1435361 475 60 ; Align 1435421 496 36 ; Align 1435466 508 144 ; Align 1450080 556 96 utg212_pilon exonerate:protein2genome:local gene 14045 115880 605 + . gene_id 0 ; sequence GL50803_41476-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14045 14426 . + . utg212_pilon exonerate:protein2genome:local exon 14045 14426 . + . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local splice5 14427 14428 . + . intron_id 1 ; splice_site "AC" utg212_pilon exonerate:protein2genome:local intron 14427 115722 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115721 115722 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115723 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115723 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14045 115880 605 + . alignment_id 0 ; Query GL50803_41476-t26_1-p1 ; Align 14045 1 87 ; Align 14132 31 294 ; Align 115725 130 156 utg11_pilon exonerate:protein2genome:local gene 290141 291460 2168 - . gene_id 0 ; sequence GL50803_4149-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 290141 291460 . - . utg11_pilon exonerate:protein2genome:local exon 290141 291460 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 290141 291460 2168 - . alignment_id 0 ; Query GL50803_4149-t26_1-p1 ; Align 291461 1 1320 utg11_pilon exonerate:protein2genome:local gene 291550 292284 1031 - . gene_id 0 ; sequence GL50803_4150-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 291550 292284 . - . utg11_pilon exonerate:protein2genome:local exon 291550 292284 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 291550 292284 1031 - . alignment_id 0 ; Query GL50803_4150-t26_1-p1 ; Align 292285 1 735 utg11_pilon exonerate:protein2genome:local gene 292316 294367 2534 - . gene_id 0 ; sequence GL50803_4151-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 292316 294367 . - . utg11_pilon exonerate:protein2genome:local exon 292316 294367 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 292316 294367 2534 - . alignment_id 0 ; Query GL50803_4151-t26_1-p1 ; Align 294368 1 1590 ; Align 292778 532 462 utg212_pilon exonerate:protein2genome:local gene 146214 148154 3370 - . gene_id 0 ; sequence GL50803_41512-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 146214 148154 . - . utg212_pilon exonerate:protein2genome:local exon 146214 148154 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 146214 148154 3370 - . alignment_id 0 ; Query GL50803_41512-t26_1-p1 ; Align 148155 1 1941 utg11_pilon exonerate:protein2genome:local gene 294389 294703 406 + . gene_id 0 ; sequence GL50803_4152-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 294389 294703 . + . utg11_pilon exonerate:protein2genome:local exon 294389 294703 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 294389 294703 406 + . alignment_id 0 ; Query GL50803_4152-t26_1-p1 ; Align 294389 1 315 utg349_pilon exonerate:protein2genome:local gene 1371216 1430964 898 - . gene_id 0 ; sequence GL50803_41539-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1430286 1430964 . - . utg349_pilon exonerate:protein2genome:local exon 1430286 1430964 . - . insertions 0 ; deletions 5 utg349_pilon exonerate:protein2genome:local splice5 1430284 1430285 . - . intron_id 1 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local intron 1371359 1430285 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1371359 1371360 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1371216 1371358 . - . utg349_pilon exonerate:protein2genome:local exon 1371216 1371358 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1371216 1430964 898 - . alignment_id 0 ; Query GL50803_41539-t26_1-p1 ; Align 1430965 2 42 ; Align 1430923 17 324 ; Align 1430599 126 87 ; Align 1430512 158 225 ; Align 1371357 234 141 utg11_pilon exonerate:protein2genome:local gene 295835 297295 2120 + . gene_id 0 ; sequence GL50803_4155-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 295835 297295 . + . utg11_pilon exonerate:protein2genome:local exon 295835 297295 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 295835 297295 2120 + . alignment_id 0 ; Query GL50803_4155-t26_1-p1 ; Align 295835 1 1461 utg11_pilon exonerate:protein2genome:local gene 297387 297785 616 - . gene_id 0 ; sequence GL50803_4156-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 297387 297785 . - . utg11_pilon exonerate:protein2genome:local exon 297387 297785 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 297387 297785 616 - . alignment_id 0 ; Query GL50803_4156-t26_1-p1 ; Align 297786 1 399 utg308_pilon exonerate:protein2genome:local gene 344392 345108 953 + . gene_id 0 ; sequence GL50803_41569-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 344392 345108 . + . utg308_pilon exonerate:protein2genome:local exon 344392 345108 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 344392 345108 953 + . alignment_id 0 ; Query GL50803_41569-t26_1-p1 ; Align 344392 1 717 utg349_pilon exonerate:protein2genome:local gene 1193879 1201141 11121 - . gene_id 0 ; sequence GL50803_41619-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1193879 1201141 . - . utg349_pilon exonerate:protein2genome:local exon 1193879 1201141 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1193879 1201141 11121 - . alignment_id 0 ; Query GL50803_41619-t26_1-p1 ; Align 1201142 1 7263 utg265_pilon exonerate:protein2genome:local gene 593201 593926 787 - . gene_id 0 ; sequence GL50803_41626-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 593201 593926 . - . utg265_pilon exonerate:protein2genome:local exon 593201 593926 . - . insertions 3 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 593201 593926 787 - . alignment_id 0 ; Query GL50803_41626-t26_1-p1 ; Align 593927 1 27 ; Align 593897 10 45 ; Align 593852 27 243 ; Align 593609 109 33 ; Align 593576 121 375 utg11_pilon exonerate:protein2genome:local gene 1004161 1005501 1776 + . gene_id 0 ; sequence GL50803_4164-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1004161 1005501 . + . utg11_pilon exonerate:protein2genome:local exon 1004161 1005501 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1004161 1005501 1776 + . alignment_id 0 ; Query GL50803_4164-t26_1-p1 ; Align 1004161 1 1341 utg11_pilon exonerate:protein2genome:local gene 1005510 1008524 4564 - . gene_id 0 ; sequence GL50803_4165-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1005510 1008524 . - . utg11_pilon exonerate:protein2genome:local exon 1005510 1008524 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1005510 1008524 4564 - . alignment_id 0 ; Query GL50803_4165-t26_1-p1 ; Align 1008525 1 3015 utg99_pilon exonerate:protein2genome:local gene 153841 219463 1734 - . gene_id 0 ; sequence GL50803_41687-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 219294 219463 . - . utg99_pilon exonerate:protein2genome:local exon 219294 219463 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 219292 219293 . - . intron_id 1 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 189507 219293 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 189507 189508 . - . intron_id 0 ; splice_site "GG" utg99_pilon exonerate:protein2genome:local cds 189375 189506 . - . utg99_pilon exonerate:protein2genome:local exon 189375 189506 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 189373 189374 . - . intron_id 2 ; splice_site "GC" utg99_pilon exonerate:protein2genome:local intron 189283 189374 . - . intron_id 2 utg99_pilon exonerate:protein2genome:local splice3 189283 189284 . - . intron_id 1 ; splice_site "AT" utg99_pilon exonerate:protein2genome:local cds 188302 189282 . - . utg99_pilon exonerate:protein2genome:local exon 188302 189282 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 188300 188301 . - . intron_id 3 ; splice_site "GG" utg99_pilon exonerate:protein2genome:local intron 154445 188301 . - . intron_id 3 utg99_pilon exonerate:protein2genome:local splice3 154445 154446 . - . intron_id 2 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 153841 154444 . - . utg99_pilon exonerate:protein2genome:local exon 153841 154444 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 153841 219463 1734 - . alignment_id 0 ; Query GL50803_41687-t26_1-p1 ; Align 219464 58 168 ; Align 189506 115 129 ; Align 189282 159 978 ; Align 154444 486 603 utg18_pilon exonerate:protein2genome:local gene 457753 458217 746 - . gene_id 0 ; sequence GL50803_41701-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 457753 458217 . - . utg18_pilon exonerate:protein2genome:local exon 457753 458217 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 457753 458217 746 - . alignment_id 0 ; Query GL50803_41701-t26_1-p1 ; Align 458218 1 465 utg64_pilon exonerate:protein2genome:local gene 462776 464056 1755 + . gene_id 0 ; sequence GL50803_41795-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 462776 464056 . + . utg64_pilon exonerate:protein2genome:local exon 462776 464056 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 462776 464056 1755 + . alignment_id 0 ; Query GL50803_41795-t26_1-p1 ; Align 462776 199 1281 utg308_pilon exonerate:protein2genome:local gene 208527 209426 1192 + . gene_id 0 ; sequence GL50803_4181-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 208527 209426 . + . utg308_pilon exonerate:protein2genome:local exon 208527 209426 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 208527 209426 1192 + . alignment_id 0 ; Query GL50803_4181-t26_1-p1 ; Align 208527 220 333 ; Align 208860 332 567 utg308_pilon exonerate:protein2genome:local gene 776295 781661 6745 + . gene_id 0 ; sequence GL50803_41834-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 776295 781661 . + . utg308_pilon exonerate:protein2genome:local exon 776295 781661 . + . insertions 24 ; deletions 8 utg308_pilon exonerate:protein2genome:local similarity 776295 781661 6745 + . alignment_id 0 ; Query GL50803_41834-t26_1-p1 ; Align 776295 1 276 ; Align 776574 93 510 ; Align 777084 264 438 ; Align 777522 414 3012 ; Align 780537 1418 252 ; Align 780789 1504 183 ; Align 780978 1565 18 ; Align 781008 1571 114 ; Align 781122 1610 540 utg349_pilon exonerate:protein2genome:local gene 317923 318396 765 + . gene_id 0 ; sequence GL50803_4188-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 317923 318396 . + . utg349_pilon exonerate:protein2genome:local exon 317923 318396 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 317923 318396 765 + . alignment_id 0 ; Query GL50803_4188-t26_1-p1 ; Align 317923 1 474 utg349_pilon exonerate:protein2genome:local gene 316171 317574 2023 + . gene_id 0 ; sequence GL50803_4191-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 316171 317574 . + . utg349_pilon exonerate:protein2genome:local exon 316171 317574 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 316171 317574 2023 + . alignment_id 0 ; Query GL50803_4191-t26_1-p1 ; Align 316171 1 1404 utg349_pilon exonerate:protein2genome:local gene 315529 316120 909 - . gene_id 0 ; sequence GL50803_4192-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 315529 316120 . - . utg349_pilon exonerate:protein2genome:local exon 315529 316120 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 315529 316120 909 - . alignment_id 0 ; Query GL50803_4192-t26_1-p1 ; Align 316121 1 207 ; Align 315913 70 384 utg308_pilon exonerate:protein2genome:local gene 64274 64807 876 + . gene_id 0 ; sequence GL50803_41927-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 64274 64807 . + . utg308_pilon exonerate:protein2genome:local exon 64274 64807 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 64274 64807 876 + . alignment_id 0 ; Query GL50803_41927-t26_1-p1 ; Align 64274 1 534 utg11_pilon exonerate:protein2genome:local gene 1601692 1603344 2486 + . gene_id 0 ; sequence GL50803_41942-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1601692 1603344 . + . utg11_pilon exonerate:protein2genome:local exon 1601692 1603344 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1601692 1603344 2486 + . alignment_id 0 ; Query GL50803_41942-t26_1-p1 ; Align 1601692 3 1653 utg349_pilon exonerate:protein2genome:local gene 312852 313886 1723 - . gene_id 0 ; sequence GL50803_4197-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 312852 313886 . - . utg349_pilon exonerate:protein2genome:local exon 312852 313886 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 312852 313886 1723 - . alignment_id 0 ; Query GL50803_4197-t26_1-p1 ; Align 313887 1 1035 utg212_pilon exonerate:protein2genome:local gene 388404 396158 11466 + . gene_id 0 ; sequence GL50803_42000-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 388404 396158 . + . utg212_pilon exonerate:protein2genome:local exon 388404 396158 . + . insertions 3 ; deletions 5 utg212_pilon exonerate:protein2genome:local similarity 388404 396158 11466 + . alignment_id 0 ; Query GL50803_42000-t26_1-p1 ; Align 388404 2 894 ; Align 389298 301 96 ; Align 389394 334 4773 ; Align 394167 1927 156 ; Align 394323 1980 771 ; Align 395097 2237 1062 utg212_pilon exonerate:protein2genome:local gene 367513 369749 3073 + . gene_id 0 ; sequence GL50803_42008-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 367513 369749 . + . utg212_pilon exonerate:protein2genome:local exon 367513 369749 . + . insertions 0 ; deletions 5 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 367513 369749 3073 + . alignment_id 0 ; Query GL50803_42008-t26_1-p1 ; Align 367513 1 138 ; Align 367653 48 696 ; Align 368349 284 1401 utg64_pilon exonerate:protein2genome:local gene 559450 560877 1731 - . gene_id 0 ; sequence GL50803_4202-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 559747 560877 . - . utg64_pilon exonerate:protein2genome:local exon 559747 560877 . - . insertions 9 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 559745 559746 . - . intron_id 1 ; splice_site "CT" utg64_pilon exonerate:protein2genome:local intron 559666 559746 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 559666 559667 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 559450 559665 . - . utg64_pilon exonerate:protein2genome:local exon 559450 559665 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 559450 560877 1731 - . alignment_id 0 ; Query GL50803_4202-t26_1-p1 ; Align 560878 1 942 ; Align 559927 315 180 ; Align 559666 375 216 utg64_pilon exonerate:protein2genome:local gene 557923 558639 1068 - . gene_id 0 ; sequence GL50803_4204-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 557923 558639 . - . utg64_pilon exonerate:protein2genome:local exon 557923 558639 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 557923 558639 1068 - . alignment_id 0 ; Query GL50803_4204-t26_1-p1 ; Align 558640 1 717 utg47_pilon exonerate:protein2genome:local gene 612678 614009 1984 + . gene_id 0 ; sequence GL50803_42048-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 612678 614009 . + . utg47_pilon exonerate:protein2genome:local exon 612678 614009 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 612678 614009 1984 + . alignment_id 0 ; Query GL50803_42048-t26_1-p1 ; Align 612678 1 1332 utg308_pilon exonerate:protein2genome:local gene 416557 417276 1004 - . gene_id 0 ; sequence GL50803_42184-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 416557 417276 . - . utg308_pilon exonerate:protein2genome:local exon 416557 417276 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 416557 417276 1004 - . alignment_id 0 ; Query GL50803_42184-t26_1-p1 ; Align 417277 1 720 utg731_pilon exonerate:protein2genome:local gene 358511 361528 3806 - . gene_id 0 ; sequence GL50803_42196-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 358511 361528 . - . utg731_pilon exonerate:protein2genome:local exon 358511 361528 . - . insertions 3 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 358511 361528 3806 - . alignment_id 0 ; Query GL50803_42196-t26_1-p1 ; Align 361529 1 2124 ; Align 359405 710 93 ; Align 359309 741 798 utg731_pilon exonerate:protein2genome:local gene 1294863 1317208 31942 + . gene_id 0 ; sequence GL50803_42285-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1294863 1317208 . + . utg731_pilon exonerate:protein2genome:local exon 1294863 1317208 . + . insertions 9 ; deletions 4 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 1294863 1317208 31942 + . alignment_id 0 ; Query GL50803_42285-t26_1-p1 ; Align 1294863 1 465 ; Align 1295337 156 864 ; Align 1296201 445 1380 ; Align 1297581 906 609 ; Align 1298190 1110 10134 ; Align 1308324 4489 378 ; Align 1308703 4615 345 ; Align 1309049 4730 8160 utg349_pilon exonerate:protein2genome:local gene 356573 358183 1932 - . gene_id 0 ; sequence GL50803_42328-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 356573 358183 . - . utg349_pilon exonerate:protein2genome:local exon 356573 358183 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 356573 358183 1932 - . alignment_id 0 ; Query GL50803_42328-t26_1-p1 ; Align 358184 1 231 ; Align 357950 78 1377 utg308_pilon exonerate:protein2genome:local gene 782805 783824 1552 + . gene_id 0 ; sequence GL50803_4235-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 782805 783824 . + . utg308_pilon exonerate:protein2genome:local exon 782805 783824 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 782805 783824 1552 + . alignment_id 0 ; Query GL50803_4235-t26_1-p1 ; Align 782805 1 1020 utg731_pilon exonerate:protein2genome:local gene 749886 751682 1646 + . gene_id 0 ; sequence GL50803_42357-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 749886 750460 . + . utg731_pilon exonerate:protein2genome:local exon 749886 750460 . + . insertions 3 ; deletions 3 utg731_pilon exonerate:protein2genome:local splice5 750461 750462 . + . intron_id 1 ; splice_site "GA" utg731_pilon exonerate:protein2genome:local intron 750461 750505 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 750504 750505 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 750506 750827 . + . utg731_pilon exonerate:protein2genome:local exon 750506 750827 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 750828 750829 . + . intron_id 2 ; splice_site "GA" utg731_pilon exonerate:protein2genome:local intron 750828 750863 . + . intron_id 2 utg731_pilon exonerate:protein2genome:local splice3 750862 750863 . + . intron_id 1 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 750864 751682 . + . utg731_pilon exonerate:protein2genome:local exon 750864 751682 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 749886 751682 1646 + . alignment_id 0 ; Query GL50803_42357-t26_1-p1 ; Align 749886 451 168 ; Align 750057 507 237 ; Align 750294 589 165 ; Align 750507 645 321 ; Align 750864 752 225 ; Align 751089 828 594 utg308_pilon exonerate:protein2genome:local gene 783854 784174 537 + . gene_id 0 ; sequence GL50803_4236-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 783854 784174 . + . utg308_pilon exonerate:protein2genome:local exon 783854 784174 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 783854 784174 537 + . alignment_id 0 ; Query GL50803_4236-t26_1-p1 ; Align 783854 1 321 utg731_pilon exonerate:protein2genome:local gene 698590 701148 3791 + . gene_id 0 ; sequence GL50803_42368-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 698590 701148 . + . utg731_pilon exonerate:protein2genome:local exon 698590 701148 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 698590 701148 3791 + . alignment_id 0 ; Query GL50803_42368-t26_1-p1 ; Align 698590 1 2559 utg731_pilon exonerate:protein2genome:local gene 665964 670894 6728 + . gene_id 0 ; sequence GL50803_42377-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 665964 669958 . + . utg731_pilon exonerate:protein2genome:local exon 665964 669958 . + . insertions 6 ; deletions 6 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local splice5 669959 669960 . + . intron_id 1 ; splice_site "CA" utg731_pilon exonerate:protein2genome:local intron 669959 670003 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 670002 670003 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 670004 670894 . + . utg731_pilon exonerate:protein2genome:local exon 670004 670894 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 665964 670894 6728 + . alignment_id 0 ; Query GL50803_42377-t26_1-p1 ; Align 665964 1 372 ; Align 666339 125 603 ; Align 666942 327 201 ; Align 667143 396 309 ; Align 667455 499 135 ; Align 667592 544 3 ; Align 667595 546 1293 ; Align 668888 979 1071 ; Align 670004 1336 891 utg308_pilon exonerate:protein2genome:local gene 784787 785080 522 - . gene_id 0 ; sequence GL50803_4239-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 784787 785080 . - . utg308_pilon exonerate:protein2genome:local exon 784787 785080 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 784787 785080 522 - . alignment_id 0 ; Query GL50803_4239-t26_1-p1 ; Align 785081 1 294 utg308_pilon exonerate:protein2genome:local gene 256435 257754 2101 + . gene_id 0 ; sequence GL50803_42442-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 256435 257754 . + . utg308_pilon exonerate:protein2genome:local exon 256435 257754 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 256435 257754 2101 + . alignment_id 0 ; Query GL50803_42442-t26_1-p1 ; Align 256435 368 1320 utg349_pilon exonerate:protein2genome:local gene 856511 857872 1535 + . gene_id 0 ; sequence GL50803_4245-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 856511 857872 . + . utg349_pilon exonerate:protein2genome:local exon 856511 857872 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 856511 857872 1535 + . alignment_id 0 ; Query GL50803_4245-t26_1-p1 ; Align 856511 1 1044 ; Align 857555 350 318 utg349_pilon exonerate:protein2genome:local gene 857924 858823 1208 + . gene_id 0 ; sequence GL50803_4246-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 857924 858823 . + . utg349_pilon exonerate:protein2genome:local exon 857924 858823 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 857924 858823 1208 + . alignment_id 0 ; Query GL50803_4246-t26_1-p1 ; Align 857924 1 900 utg349_pilon exonerate:protein2genome:local gene 859176 859928 1086 - . gene_id 0 ; sequence GL50803_4248-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 859176 859928 . - . utg349_pilon exonerate:protein2genome:local exon 859176 859928 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 859176 859928 1086 - . alignment_id 0 ; Query GL50803_4248-t26_1-p1 ; Align 859929 6 753 utg64_pilon exonerate:protein2genome:local gene 597563 598591 1235 + . gene_id 0 ; sequence GL50803_4255-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 597563 598591 . + . utg64_pilon exonerate:protein2genome:local exon 597563 598591 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 597563 598591 1235 + . alignment_id 0 ; Query GL50803_4255-t26_1-p1 ; Align 597563 1 693 ; Align 598256 233 336 utg64_pilon exonerate:protein2genome:local gene 598984 601356 3384 + . gene_id 0 ; sequence GL50803_4257-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 598984 601356 . + . utg64_pilon exonerate:protein2genome:local exon 598984 601356 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 598984 601356 3384 + . alignment_id 0 ; Query GL50803_4257-t26_1-p1 ; Align 598984 1 2373 utg64_pilon exonerate:protein2genome:local gene 601606 602337 899 - . gene_id 0 ; sequence GL50803_4259-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 601606 602337 . - . utg64_pilon exonerate:protein2genome:local exon 601606 602337 . - . insertions 15 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 601606 602337 899 - . alignment_id 0 ; Query GL50803_4259-t26_1-p1 ; Align 602338 43 120 ; Align 602203 83 108 ; Align 602095 121 489 utg265_pilon exonerate:protein2genome:local gene 873308 876832 4261 + . gene_id 0 ; sequence GL50803_4263-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 873308 876832 . + . utg265_pilon exonerate:protein2genome:local exon 873308 876832 . + . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 873308 876832 4261 + . alignment_id 0 ; Query GL50803_4263-t26_1-p1 ; Align 873308 1 2769 ; Align 876077 925 756 utg265_pilon exonerate:protein2genome:local gene 876833 878857 2727 - . gene_id 0 ; sequence GL50803_4264-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 876833 878857 . - . utg265_pilon exonerate:protein2genome:local exon 876833 878857 . - . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 876833 878857 2727 - . alignment_id 0 ; Query GL50803_4264-t26_1-p1 ; Align 878858 1 1092 ; Align 877760 365 927 utg265_pilon exonerate:protein2genome:local gene 716650 884757 1268 - . gene_id 0 ; sequence GL50803_42657-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 883973 884757 . - . utg265_pilon exonerate:protein2genome:local exon 883973 884757 . - . insertions 15 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 883971 883972 . - . intron_id 1 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 871674 883972 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 871674 871675 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 871130 871673 . - . utg265_pilon exonerate:protein2genome:local exon 871130 871673 . - . insertions 12 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 871128 871129 . - . intron_id 2 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 717211 871129 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 717211 717212 . - . intron_id 1 ; splice_site "AC" utg265_pilon exonerate:protein2genome:local cds 717016 717210 . - . utg265_pilon exonerate:protein2genome:local exon 717016 717210 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 717014 717015 . - . intron_id 3 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 716986 717015 . - . intron_id 3 utg265_pilon exonerate:protein2genome:local splice3 716986 716987 . - . intron_id 2 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local cds 716650 716985 . - . utg265_pilon exonerate:protein2genome:local exon 716650 716985 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 716650 884757 1268 - . alignment_id 0 ; Query GL50803_42657-t26_1-p1 ; Align 884758 6 237 ; Align 884506 85 531 ; Align 871673 263 114 ; Align 871556 301 72 ; Align 871475 325 345 ; Align 717211 440 195 ; Align 716986 505 336 utg265_pilon exonerate:protein2genome:local gene 879856 882111 2794 - . gene_id 0 ; sequence GL50803_4266-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 879856 882111 . - . utg265_pilon exonerate:protein2genome:local exon 879856 882111 . - . insertions 0 ; deletions 5 utg265_pilon exonerate:protein2genome:local similarity 879856 882111 2794 - . alignment_id 0 ; Query GL50803_4266-t26_1-p1 ; Align 882112 1 720 ; Align 881392 243 288 ; Align 881104 340 885 ; Align 880219 637 363 utg47_pilon exonerate:protein2genome:local gene 1345779 1353182 10537 - . gene_id 0 ; sequence GL50803_42676-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1345779 1353182 . - . utg47_pilon exonerate:protein2genome:local exon 1345779 1353182 . - . insertions 9 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1345779 1353182 10537 - . alignment_id 0 ; Query GL50803_42676-t26_1-p1 ; Align 1353183 1 1284 ; Align 1351896 429 1290 ; Align 1350606 860 3777 ; Align 1346826 2119 213 ; Align 1346613 2191 243 ; Align 1346367 2272 588 utg99_pilon exonerate:protein2genome:local gene 156318 156833 512 - . gene_id 0 ; sequence GL50803_42698-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 156318 156833 . - . utg99_pilon exonerate:protein2genome:local exon 156318 156833 . - . insertions 15 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 156318 156833 512 - . alignment_id 0 ; Query GL50803_42698-t26_1-p1 ; Align 156834 1 72 ; Align 156747 25 429 utg265_pilon exonerate:protein2genome:local gene 871742 884598 512 - . gene_id 0 ; sequence GL50803_42698-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 884525 884598 . - . utg265_pilon exonerate:protein2genome:local exon 884525 884598 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 884523 884524 . - . intron_id 1 ; splice_site "CA" utg265_pilon exonerate:protein2genome:local intron 872169 884524 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 872169 872170 . - . intron_id 0 ; splice_site "AA" utg265_pilon exonerate:protein2genome:local cds 871742 872168 . - . utg265_pilon exonerate:protein2genome:local exon 871742 872168 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 871742 884598 512 - . alignment_id 0 ; Query GL50803_42698-t26_1-p1 ; Align 884599 1 72 ; Align 872168 26 426 utg47_pilon exonerate:protein2genome:local gene 1945548 1946495 1360 + . gene_id 0 ; sequence GL50803_4270-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1945548 1946495 . + . utg47_pilon exonerate:protein2genome:local exon 1945548 1946495 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1945548 1946495 1360 + . alignment_id 0 ; Query GL50803_4270-t26_1-p1 ; Align 1945548 11 948 utg308_pilon exonerate:protein2genome:local gene 861716 862447 1045 + . gene_id 0 ; sequence GL50803_42780-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 861716 862447 . + . utg308_pilon exonerate:protein2genome:local exon 861716 862447 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 861716 862447 1045 + . alignment_id 0 ; Query GL50803_42780-t26_1-p1 ; Align 861716 1 732 utg18_pilon exonerate:protein2genome:local gene 76241 78097 2507 - . gene_id 0 ; sequence GL50803_4288-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 76241 78097 . - . utg18_pilon exonerate:protein2genome:local exon 76241 78097 . - . insertions 0 ; deletions 4 utg18_pilon exonerate:protein2genome:local similarity 76241 78097 2507 - . alignment_id 0 ; Query GL50803_4288-t26_1-p1 ; Align 78098 1 1221 ; Align 76877 409 117 ; Align 76760 451 519 utg11_pilon exonerate:protein2genome:local gene 1024799 1159373 559 - . gene_id 0 ; sequence GL50803_4313-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1159013 1159373 . - . utg11_pilon exonerate:protein2genome:local exon 1159013 1159373 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1159011 1159012 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1025014 1159012 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1025014 1025015 . - . intron_id 0 ; splice_site "TG" utg11_pilon exonerate:protein2genome:local cds 1024799 1025013 . - . utg11_pilon exonerate:protein2genome:local exon 1024799 1025013 . - . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1024799 1159373 559 - . alignment_id 0 ; Query GL50803_4313-t26_1-p1 ; Align 1159374 6 360 ; Align 1025012 127 42 ; Align 1024970 142 33 ; Align 1024934 153 135 utg308_pilon exonerate:protein2genome:local gene 879033 879977 1186 - . gene_id 0 ; sequence GL50803_4320-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 879033 879977 . - . utg308_pilon exonerate:protein2genome:local exon 879033 879977 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 879033 879977 1186 - . alignment_id 0 ; Query GL50803_4320-t26_1-p1 ; Align 879978 1 945 utg308_pilon exonerate:protein2genome:local gene 882079 883857 2500 + . gene_id 0 ; sequence GL50803_4322-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 882079 883857 . + . utg308_pilon exonerate:protein2genome:local exon 882079 883857 . + . insertions 0 ; deletions 4 utg308_pilon exonerate:protein2genome:local similarity 882079 883857 2500 + . alignment_id 0 ; Query GL50803_4322-t26_1-p1 ; Align 882079 407 393 ; Align 882472 542 1386 utg308_pilon exonerate:protein2genome:local gene 883877 885010 1096 + . gene_id 0 ; sequence GL50803_4323-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 883877 885010 . + . utg308_pilon exonerate:protein2genome:local exon 883877 885010 . + . insertions 3 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 883877 885010 1096 + . alignment_id 0 ; Query GL50803_4323-t26_1-p1 ; Align 883877 9 252 ; Align 884129 94 240 ; Align 884372 174 639 utg308_pilon exonerate:protein2genome:local gene 885024 886391 1173 - . gene_id 0 ; sequence GL50803_4324-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 885024 886391 . - . utg308_pilon exonerate:protein2genome:local exon 885024 886391 . - . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 885024 886391 1173 - . alignment_id 0 ; Query GL50803_4324-t26_1-p1 ; Align 886392 1 1095 ; Align 885297 368 273 utg18_pilon exonerate:protein2genome:local gene 148753 151239 3788 + . gene_id 0 ; sequence GL50803_4328-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 148753 151239 . + . utg18_pilon exonerate:protein2genome:local exon 148753 151239 . + . insertions 0 ; deletions 4 utg18_pilon exonerate:protein2genome:local similarity 148753 151239 3788 + . alignment_id 0 ; Query GL50803_4328-t26_1-p1 ; Align 148753 1 342 ; Align 149095 119 2145 utg18_pilon exonerate:protein2genome:local gene 151634 152542 1478 - . gene_id 0 ; sequence GL50803_4329-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 151634 152542 . - . utg18_pilon exonerate:protein2genome:local exon 151634 152542 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 151634 152542 1478 - . alignment_id 0 ; Query GL50803_4329-t26_1-p1 ; Align 152543 1 909 utg18_pilon exonerate:protein2genome:local gene 153422 154645 1693 + . gene_id 0 ; sequence GL50803_4331-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 153422 154645 . + . utg18_pilon exonerate:protein2genome:local exon 153422 154645 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 153422 154645 1693 + . alignment_id 0 ; Query GL50803_4331-t26_1-p1 ; Align 153422 1 1224 utg349_pilon exonerate:protein2genome:local gene 374410 375237 1367 + . gene_id 0 ; sequence GL50803_4337-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 374410 375237 . + . utg349_pilon exonerate:protein2genome:local exon 374410 375237 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 374410 375237 1367 + . alignment_id 0 ; Query GL50803_4337-t26_1-p1 ; Align 374410 1 828 utg731_pilon exonerate:protein2genome:local gene 1196895 1197971 1486 + . gene_id 0 ; sequence GL50803_4341-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1196895 1197971 . + . utg731_pilon exonerate:protein2genome:local exon 1196895 1197971 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1196895 1197971 1486 + . alignment_id 0 ; Query GL50803_4341-t26_1-p1 ; Align 1196895 1 792 ; Align 1197687 267 285 utg731_pilon exonerate:protein2genome:local gene 1193444 1194553 1699 + . gene_id 0 ; sequence GL50803_4343-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1193444 1194553 . + . utg731_pilon exonerate:protein2genome:local exon 1193444 1194553 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1193444 1194553 1699 + . alignment_id 0 ; Query GL50803_4343-t26_1-p1 ; Align 1193444 1 1110 utg731_pilon exonerate:protein2genome:local gene 1192916 1193326 549 - . gene_id 0 ; sequence GL50803_4344-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1192916 1193326 . - . utg731_pilon exonerate:protein2genome:local exon 1192916 1193326 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1192916 1193326 549 - . alignment_id 0 ; Query GL50803_4344-t26_1-p1 ; Align 1193327 1 411 utg731_pilon exonerate:protein2genome:local gene 1189623 1190261 1100 + . gene_id 0 ; sequence GL50803_4349-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1189623 1190261 . + . utg731_pilon exonerate:protein2genome:local exon 1189623 1190261 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1189623 1190261 1100 + . alignment_id 0 ; Query GL50803_4349-t26_1-p1 ; Align 1189623 1 639 utg731_pilon exonerate:protein2genome:local gene 207055 207393 534 - . gene_id 0 ; sequence GL50803_4355-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 207055 207393 . - . utg731_pilon exonerate:protein2genome:local exon 207055 207393 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 207055 207393 534 - . alignment_id 0 ; Query GL50803_4355-t26_1-p1 ; Align 207394 1 339 utg731_pilon exonerate:protein2genome:local gene 207365 207967 742 + . gene_id 0 ; sequence GL50803_4356-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 207365 207967 . + . utg731_pilon exonerate:protein2genome:local exon 207365 207967 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 207365 207967 742 + . alignment_id 0 ; Query GL50803_4356-t26_1-p1 ; Align 207365 1 603 utg731_pilon exonerate:protein2genome:local gene 208057 210042 3322 + . gene_id 0 ; sequence GL50803_4357-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 208057 210042 . + . utg731_pilon exonerate:protein2genome:local exon 208057 210042 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 208057 210042 3322 + . alignment_id 0 ; Query GL50803_4357-t26_1-p1 ; Align 208057 1 1464 ; Align 209524 489 519 utg265_pilon exonerate:protein2genome:local gene 647160 647579 500 + . gene_id 0 ; sequence GL50803_4364-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 647160 647579 . + . utg265_pilon exonerate:protein2genome:local exon 647160 647579 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 647160 647579 500 + . alignment_id 0 ; Query GL50803_4364-t26_1-p1 ; Align 647160 1 420 utg265_pilon exonerate:protein2genome:local gene 647622 649124 2342 + . gene_id 0 ; sequence GL50803_4365-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 647622 649124 . + . utg265_pilon exonerate:protein2genome:local exon 647622 649124 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 647622 649124 2342 + . alignment_id 0 ; Query GL50803_4365-t26_1-p1 ; Align 647622 1 1503 utg731_pilon exonerate:protein2genome:local gene 613561 614088 821 - . gene_id 0 ; sequence GL50803_4368-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 613561 614088 . - . utg731_pilon exonerate:protein2genome:local exon 613561 614088 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 613561 614088 821 - . alignment_id 0 ; Query GL50803_4368-t26_1-p1 ; Align 614089 1 528 utg731_pilon exonerate:protein2genome:local gene 613177 613530 501 - . gene_id 0 ; sequence GL50803_4369-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 613177 613530 . - . utg731_pilon exonerate:protein2genome:local exon 613177 613530 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 613177 613530 501 - . alignment_id 0 ; Query GL50803_4369-t26_1-p1 ; Align 613531 1 354 utg731_pilon exonerate:protein2genome:local gene 610806 613134 3390 + . gene_id 0 ; sequence GL50803_4371-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 610806 613134 . + . utg731_pilon exonerate:protein2genome:local exon 610806 613134 . + . insertions 0 ; deletions 2 ; frameshifts 4 utg731_pilon exonerate:protein2genome:local similarity 610806 613134 3390 + . alignment_id 0 ; Query GL50803_4371-t26_1-p1 ; Align 610806 1 747 ; Align 611555 251 612 ; Align 612169 456 966 utg308_pilon exonerate:protein2genome:local gene 452930 455293 3070 + . gene_id 0 ; sequence GL50803_4383-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 452930 455293 . + . utg308_pilon exonerate:protein2genome:local exon 452930 455293 . + . insertions 12 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 452930 455293 3070 + . alignment_id 0 ; Query GL50803_4383-t26_1-p1 ; Align 452930 1 531 ; Align 453461 179 60 ; Align 453533 199 1761 utg11_pilon exonerate:protein2genome:local gene 1376021 1378060 2503 + . gene_id 0 ; sequence GL50803_4405-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1376021 1378060 . + . utg11_pilon exonerate:protein2genome:local exon 1376021 1378060 . + . insertions 3 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 1376021 1378060 2503 + . alignment_id 0 ; Query GL50803_4405-t26_1-p1 ; Align 1376021 1 555 ; Align 1376576 189 660 ; Align 1377239 409 822 utg11_pilon exonerate:protein2genome:local gene 1380865 1381629 1272 + . gene_id 0 ; sequence GL50803_4410-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1380865 1381629 . + . utg11_pilon exonerate:protein2genome:local exon 1380865 1381629 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1380865 1381629 1272 + . alignment_id 0 ; Query GL50803_4410-t26_1-p1 ; Align 1380865 1 765 utg265_pilon exonerate:protein2genome:local gene 686925 687833 1297 + . gene_id 0 ; sequence GL50803_4414-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 686925 687833 . + . utg265_pilon exonerate:protein2genome:local exon 686925 687833 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 686925 687833 1297 + . alignment_id 0 ; Query GL50803_4414-t26_1-p1 ; Align 686925 1 909 utg265_pilon exonerate:protein2genome:local gene 685228 686808 1704 - . gene_id 0 ; sequence GL50803_4415-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 685983 686808 . - . utg265_pilon exonerate:protein2genome:local exon 685983 686808 . - . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local splice5 685981 685982 . - . intron_id 1 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 685953 685982 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 685953 685954 . - . intron_id 0 ; splice_site "TG" utg265_pilon exonerate:protein2genome:local cds 685228 685952 . - . utg265_pilon exonerate:protein2genome:local exon 685228 685952 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 685228 686808 1704 - . alignment_id 0 ; Query GL50803_4415-t26_1-p1 ; Align 686809 1 687 ; Align 686122 233 138 ; Align 685951 280 33 ; Align 685918 292 690 utg265_pilon exonerate:protein2genome:local gene 684450 685232 947 + . gene_id 0 ; sequence GL50803_4416-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 684450 685232 . + . utg265_pilon exonerate:protein2genome:local exon 684450 685232 . + . insertions 6 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 684450 685232 947 + . alignment_id 0 ; Query GL50803_4416-t26_1-p1 ; Align 684450 1 192 ; Align 684642 66 39 ; Align 684687 79 108 ; Align 684795 117 438 utg265_pilon exonerate:protein2genome:local gene 682850 683572 773 - . gene_id 0 ; sequence GL50803_4420-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 682850 683572 . - . utg265_pilon exonerate:protein2genome:local exon 682850 683572 . - . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 682850 683572 773 - . alignment_id 0 ; Query GL50803_4420-t26_1-p1 ; Align 683573 2 408 ; Align 683165 140 315 utg265_pilon exonerate:protein2genome:local gene 681014 681124 111 - . gene_id 0 ; sequence GL50803_4422-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 681014 681124 . - . utg265_pilon exonerate:protein2genome:local exon 681014 681124 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 681014 681124 111 - . alignment_id 0 ; Query GL50803_4422-t26_1-p1 ; Align 681125 1 111 utg265_pilon exonerate:protein2genome:local gene 58008 302825 142 + . gene_id 0 ; sequence GL50803_4430-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 58008 58040 . + . utg265_pilon exonerate:protein2genome:local exon 58008 58040 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 58041 58042 . + . intron_id 1 ; splice_site "GG" utg265_pilon exonerate:protein2genome:local intron 58041 155600 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 155599 155600 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 155601 155800 . + . utg265_pilon exonerate:protein2genome:local exon 155601 155800 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 155801 155802 . + . intron_id 2 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local intron 155801 302647 . + . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 302646 302647 . + . intron_id 1 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 302648 302825 . + . utg265_pilon exonerate:protein2genome:local exon 302648 302825 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 58008 302825 142 + . alignment_id 0 ; Query GL50803_4430-t26_1-p1 ; Align 58008 92 33 ; Align 155601 103 198 ; Align 302649 170 177 utg349_pilon exonerate:protein2genome:local gene 957671 957820 146 - . gene_id 0 ; sequence GL50803_4432-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 957671 957820 . - . utg349_pilon exonerate:protein2genome:local exon 957671 957820 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 957671 957820 146 - . alignment_id 0 ; Query GL50803_4432-t26_1-p1 ; Align 957821 1 150 utg265_pilon exonerate:protein2genome:local gene 343532 343774 233 + . gene_id 0 ; sequence GL50803_4439-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 343532 343774 . + . utg265_pilon exonerate:protein2genome:local exon 343532 343774 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 343532 343774 233 + . alignment_id 0 ; Query GL50803_4439-t26_1-p1 ; Align 343532 13 243 utg1966_pilon exonerate:protein2genome:local gene 29172 29414 233 - . gene_id 0 ; sequence GL50803_4439-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 29172 29414 . - . utg1966_pilon exonerate:protein2genome:local exon 29172 29414 . - . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 29172 29414 233 - . alignment_id 0 ; Query GL50803_4439-t26_1-p1 ; Align 29415 13 243 utg731_pilon exonerate:protein2genome:local gene 1570711 1570968 304 - . gene_id 0 ; sequence GL50803_4455-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1570711 1570968 . - . utg731_pilon exonerate:protein2genome:local exon 1570711 1570968 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1570711 1570968 304 - . alignment_id 0 ; Query GL50803_4455-t26_1-p1 ; Align 1570969 85 258 utg47_pilon exonerate:protein2genome:local gene 594479 595039 950 + . gene_id 0 ; sequence GL50803_4463-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 594479 595039 . + . utg47_pilon exonerate:protein2genome:local exon 594479 595039 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 594479 595039 950 + . alignment_id 0 ; Query GL50803_4463-t26_1-p1 ; Align 594479 1 561 utg308_pilon exonerate:protein2genome:local gene 297674 297814 118 - . gene_id 0 ; sequence GL50803_4465-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 297674 297814 . - . utg308_pilon exonerate:protein2genome:local exon 297674 297814 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 297674 297814 118 - . alignment_id 0 ; Query GL50803_4465-t26_1-p1 ; Align 297815 12 141 utg349_pilon exonerate:protein2genome:local gene 1590484 1592754 3540 + . gene_id 0 ; sequence GL50803_4498-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1590484 1592754 . + . utg349_pilon exonerate:protein2genome:local exon 1590484 1592754 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1590484 1592754 3540 + . alignment_id 0 ; Query GL50803_4498-t26_1-p1 ; Align 1590484 1 2271 utg64_pilon exonerate:protein2genome:local gene 56280 56924 1097 + . gene_id 0 ; sequence GL50803_4502-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 56280 56924 . + . utg64_pilon exonerate:protein2genome:local exon 56280 56924 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 56280 56924 1097 + . alignment_id 0 ; Query GL50803_4502-t26_1-p1 ; Align 56280 1 645 utg731_pilon exonerate:protein2genome:local gene 469483 472152 4007 + . gene_id 0 ; sequence GL50803_4507-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 469483 472152 . + . utg731_pilon exonerate:protein2genome:local exon 469483 472152 . + . insertions 0 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 469483 472152 4007 + . alignment_id 0 ; Query GL50803_4507-t26_1-p1 ; Align 469483 1 1524 ; Align 471007 512 138 ; Align 471145 560 1008 utg731_pilon exonerate:protein2genome:local gene 468514 469095 861 - . gene_id 0 ; sequence GL50803_4509-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 468514 469095 . - . utg731_pilon exonerate:protein2genome:local exon 468514 469095 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 468514 469095 861 - . alignment_id 0 ; Query GL50803_4509-t26_1-p1 ; Align 469096 1 582 utg308_pilon exonerate:protein2genome:local gene 575384 578858 3896 + . gene_id 0 ; sequence GL50803_4532-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 575384 578858 . + . utg308_pilon exonerate:protein2genome:local exon 575384 578858 . + . insertions 12 ; deletions 1 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 575384 578858 3896 + . alignment_id 0 ; Query GL50803_4532-t26_1-p1 ; Align 575384 1 861 ; Align 576254 288 75 ; Align 576332 313 147 ; Align 576479 363 408 ; Align 576888 499 1971 utg11_pilon exonerate:protein2genome:local gene 1323195 1323392 330 - . gene_id 0 ; sequence GL50803_4538-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1323195 1323392 . - . utg11_pilon exonerate:protein2genome:local exon 1323195 1323392 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1323195 1323392 330 - . alignment_id 0 ; Query GL50803_4538-t26_1-p1 ; Align 1323393 1 198 utg11_pilon exonerate:protein2genome:local gene 1323558 1324427 957 - . gene_id 0 ; sequence GL50803_4540-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1323558 1324427 . - . utg11_pilon exonerate:protein2genome:local exon 1323558 1324427 . - . insertions 0 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 1323558 1324427 957 - . alignment_id 0 ; Query GL50803_4540-t26_1-p1 ; Align 1324428 1 429 ; Align 1323999 147 174 ; Align 1323825 207 267 utg64_pilon exonerate:protein2genome:local gene 660827 661393 896 + . gene_id 0 ; sequence GL50803_4547-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 660827 661393 . + . utg64_pilon exonerate:protein2genome:local exon 660827 661393 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 660827 661393 896 + . alignment_id 0 ; Query GL50803_4547-t26_1-p1 ; Align 660827 1 567 utg64_pilon exonerate:protein2genome:local gene 658721 660712 2015 + . gene_id 0 ; sequence GL50803_4548-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 658721 660712 . + . utg64_pilon exonerate:protein2genome:local exon 658721 660712 . + . insertions 0 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 658721 660712 2015 + . alignment_id 0 ; Query GL50803_4548-t26_1-p1 ; Align 658721 1 285 ; Align 659006 97 138 ; Align 659144 144 120 ; Align 659264 185 1449 utg64_pilon exonerate:protein2genome:local gene 657441 658322 1211 - . gene_id 0 ; sequence GL50803_4549-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 657441 658322 . - . utg64_pilon exonerate:protein2genome:local exon 657441 658322 . - . insertions 3 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 657441 658322 1211 - . alignment_id 0 ; Query GL50803_4549-t26_1-p1 ; Align 658323 1 183 ; Align 658140 64 204 ; Align 657933 132 492 utg265_pilon exonerate:protein2genome:local gene 913740 915542 2189 + . gene_id 0 ; sequence GL50803_4554-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 913740 915542 . + . utg265_pilon exonerate:protein2genome:local exon 913740 915542 . + . insertions 0 ; deletions 6 utg265_pilon exonerate:protein2genome:local similarity 913740 915542 2189 + . alignment_id 0 ; Query GL50803_4554-t26_1-p1 ; Align 913740 11 717 ; Align 914457 254 237 ; Align 914694 334 75 ; Align 914769 360 774 utg265_pilon exonerate:protein2genome:local gene 911159 911803 1090 - . gene_id 0 ; sequence GL50803_4558-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 911159 911803 . - . utg265_pilon exonerate:protein2genome:local exon 911159 911803 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 911159 911803 1090 - . alignment_id 0 ; Query GL50803_4558-t26_1-p1 ; Align 911804 1 645 utg349_pilon exonerate:protein2genome:local gene 1400068 1400685 934 + . gene_id 0 ; sequence GL50803_4563-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1400068 1400685 . + . utg349_pilon exonerate:protein2genome:local exon 1400068 1400685 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1400068 1400685 934 + . alignment_id 0 ; Query GL50803_4563-t26_1-p1 ; Align 1400068 43 618 utg64_pilon exonerate:protein2genome:local gene 622416 622925 665 + . gene_id 0 ; sequence GL50803_4571-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 622416 622925 . + . utg64_pilon exonerate:protein2genome:local exon 622416 622925 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 622416 622925 665 + . alignment_id 0 ; Query GL50803_4571-t26_1-p1 ; Align 622416 1 27 ; Align 622443 11 483 utg64_pilon exonerate:protein2genome:local gene 626508 627239 1169 + . gene_id 0 ; sequence GL50803_4577-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 626508 627239 . + . utg64_pilon exonerate:protein2genome:local exon 626508 627239 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 626508 627239 1169 + . alignment_id 0 ; Query GL50803_4577-t26_1-p1 ; Align 626508 1 732 utg64_pilon exonerate:protein2genome:local gene 627264 627605 478 - . gene_id 0 ; sequence GL50803_4578-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 627264 627605 . - . utg64_pilon exonerate:protein2genome:local exon 627264 627605 . - . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 627264 627605 478 - . alignment_id 0 ; Query GL50803_4578-t26_1-p1 ; Align 627606 1 258 ; Align 627348 89 84 utg64_pilon exonerate:protein2genome:local gene 627621 628250 1054 + . gene_id 0 ; sequence GL50803_4579-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 627621 628250 . + . utg64_pilon exonerate:protein2genome:local exon 627621 628250 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 627621 628250 1054 + . alignment_id 0 ; Query GL50803_4579-t26_1-p1 ; Align 627621 1 630 utg212_pilon exonerate:protein2genome:local gene 74064 76590 3112 + . gene_id 0 ; sequence GL50803_4587-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 74064 76590 . + . utg212_pilon exonerate:protein2genome:local exon 74064 76590 . + . insertions 12 ; deletions 9 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 74064 76590 3112 + . alignment_id 0 ; Query GL50803_4587-t26_1-p1 ; Align 74064 1 570 ; Align 74637 191 171 ; Align 74809 248 354 ; Align 75163 367 240 ; Align 75403 448 30 ; Align 75433 459 138 ; Align 75571 506 75 ; Align 75652 531 291 ; Align 75943 629 21 ; Align 75964 640 201 ; Align 76168 707 423 utg212_pilon exonerate:protein2genome:local gene 77318 78109 1304 + . gene_id 0 ; sequence GL50803_4590-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 77318 78109 . + . utg212_pilon exonerate:protein2genome:local exon 77318 78109 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 77318 78109 1304 + . alignment_id 0 ; Query GL50803_4590-t26_1-p1 ; Align 77318 1 792 utg308_pilon exonerate:protein2genome:local gene 930544 935202 6250 - . gene_id 0 ; sequence GL50803_4595-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 930544 935202 . - . utg308_pilon exonerate:protein2genome:local exon 930544 935202 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 930544 935202 6250 - . alignment_id 0 ; Query GL50803_4595-t26_1-p1 ; Align 935203 1 1944 ; Align 933256 649 2712 utg308_pilon exonerate:protein2genome:local gene 935237 936250 1327 - . gene_id 0 ; sequence GL50803_4596-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 935237 936250 . - . utg308_pilon exonerate:protein2genome:local exon 935237 936250 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 935237 936250 1327 - . alignment_id 0 ; Query GL50803_4596-t26_1-p1 ; Align 936251 1 1014 utg308_pilon exonerate:protein2genome:local gene 936275 937342 1172 - . gene_id 0 ; sequence GL50803_4597-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 936275 937342 . - . utg308_pilon exonerate:protein2genome:local exon 936275 937342 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 936275 937342 1172 - . alignment_id 0 ; Query GL50803_4597-t26_1-p1 ; Align 937343 22 1068 utg11_pilon exonerate:protein2genome:local gene 1449282 1450178 1340 - . gene_id 0 ; sequence GL50803_4602-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1449282 1450178 . - . utg11_pilon exonerate:protein2genome:local exon 1449282 1450178 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1449282 1450178 1340 - . alignment_id 0 ; Query GL50803_4602-t26_1-p1 ; Align 1450179 1 897 utg11_pilon exonerate:protein2genome:local gene 1445051 1445758 1067 + . gene_id 0 ; sequence GL50803_4606-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1445051 1445758 . + . utg11_pilon exonerate:protein2genome:local exon 1445051 1445758 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1445051 1445758 1067 + . alignment_id 0 ; Query GL50803_4606-t26_1-p1 ; Align 1445051 1 135 ; Align 1445189 46 570 utg731_pilon exonerate:protein2genome:local gene 487334 489049 1885 + . gene_id 0 ; sequence GL50803_4622-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 487334 489049 . + . utg731_pilon exonerate:protein2genome:local exon 487334 489049 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 487334 489049 1885 + . alignment_id 0 ; Query GL50803_4622-t26_1-p1 ; Align 487334 1 1476 ; Align 488810 495 240 utg731_pilon exonerate:protein2genome:local gene 486865 487266 641 - . gene_id 0 ; sequence GL50803_4624-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 486865 487266 . - . utg731_pilon exonerate:protein2genome:local exon 486865 487266 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 486865 487266 641 - . alignment_id 0 ; Query GL50803_4624-t26_1-p1 ; Align 487267 1 402 utg731_pilon exonerate:protein2genome:local gene 485847 486035 220 + . gene_id 0 ; sequence GL50803_4625-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 485847 486035 . + . utg731_pilon exonerate:protein2genome:local exon 485847 486035 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 485847 486035 220 + . alignment_id 0 ; Query GL50803_4625-t26_1-p1 ; Align 485847 1 189 utg731_pilon exonerate:protein2genome:local gene 483644 486820 4347 - . gene_id 0 ; sequence GL50803_4627-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 483644 486820 . - . utg731_pilon exonerate:protein2genome:local exon 483644 486820 . - . insertions 0 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 483644 486820 4347 - . alignment_id 0 ; Query GL50803_4627-t26_1-p1 ; Align 486821 2 2136 ; Align 484685 715 531 ; Align 484154 896 510 utg731_pilon exonerate:protein2genome:local gene 480173 480874 747 - . gene_id 0 ; sequence GL50803_4629-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 480173 480874 . - . utg731_pilon exonerate:protein2genome:local exon 480173 480874 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 480173 480874 747 - . alignment_id 0 ; Query GL50803_4629-t26_1-p1 ; Align 480875 1 498 ; Align 480374 167 201 utg731_pilon exonerate:protein2genome:local gene 478894 480012 1441 + . gene_id 0 ; sequence GL50803_4631-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 478894 480012 . + . utg731_pilon exonerate:protein2genome:local exon 478894 480012 . + . insertions 0 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 478894 480012 1441 + . alignment_id 0 ; Query GL50803_4631-t26_1-p1 ; Align 478894 1 630 ; Align 479524 214 342 ; Align 479866 329 147 utg99_pilon exonerate:protein2genome:local gene 208561 210492 2375 + . gene_id 0 ; sequence GL50803_4644-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 208561 210492 . + . utg99_pilon exonerate:protein2genome:local exon 208561 210492 . + . insertions 0 ; deletions 5 utg99_pilon exonerate:protein2genome:local similarity 208561 210492 2375 + . alignment_id 0 ; Query GL50803_4644-t26_1-p1 ; Align 208561 1 852 ; Align 209413 286 828 ; Align 210241 566 252 utg64_pilon exonerate:protein2genome:local gene 948062 948535 766 - . gene_id 0 ; sequence GL50803_4652-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 948062 948535 . - . utg64_pilon exonerate:protein2genome:local exon 948062 948535 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 948062 948535 766 - . alignment_id 0 ; Query GL50803_4652-t26_1-p1 ; Align 948536 1 474 utg64_pilon exonerate:protein2genome:local gene 948772 949827 1539 + . gene_id 0 ; sequence GL50803_4653-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 948772 949827 . + . utg64_pilon exonerate:protein2genome:local exon 948772 949827 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 948772 949827 1539 + . alignment_id 0 ; Query GL50803_4653-t26_1-p1 ; Align 948772 1 66 ; Align 948841 23 987 utg64_pilon exonerate:protein2genome:local gene 953118 956915 3556 + . gene_id 0 ; sequence GL50803_4657-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 953118 956915 . + . utg64_pilon exonerate:protein2genome:local exon 953118 956915 . + . insertions 21 ; deletions 5 utg64_pilon exonerate:protein2genome:local similarity 953118 956915 3556 + . alignment_id 0 ; Query GL50803_4657-t26_1-p1 ; Align 953118 332 603 ; Align 953724 533 468 ; Align 954195 689 441 ; Align 954648 836 786 ; Align 955437 1098 717 ; Align 956154 1338 123 ; Align 956277 1380 21 ; Align 956298 1388 51 ; Align 956349 1407 567 utg308_pilon exonerate:protein2genome:local gene 533208 533873 673 - . gene_id 0 ; sequence GL50803_4687-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 533208 533873 . - . utg308_pilon exonerate:protein2genome:local exon 533208 533873 . - . insertions 3 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 533208 533873 673 - . alignment_id 0 ; Query GL50803_4687-t26_1-p1 ; Align 533874 1 162 ; Align 533709 55 390 ; Align 533319 186 111 utg308_pilon exonerate:protein2genome:local gene 532495 533145 965 - . gene_id 0 ; sequence GL50803_4689-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 532495 533145 . - . utg308_pilon exonerate:protein2genome:local exon 532495 533145 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 532495 533145 965 - . alignment_id 0 ; Query GL50803_4689-t26_1-p1 ; Align 533146 1 651 utg308_pilon exonerate:protein2genome:local gene 531969 532484 411 - . gene_id 0 ; sequence GL50803_4690-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 531969 532484 . - . utg308_pilon exonerate:protein2genome:local exon 531969 532484 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 531969 532484 411 - . alignment_id 0 ; Query GL50803_4690-t26_1-p1 ; Align 532485 18 33 ; Align 532452 30 483 utg308_pilon exonerate:protein2genome:local gene 531200 531916 1173 - . gene_id 0 ; sequence GL50803_4692-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 531200 531916 . - . utg308_pilon exonerate:protein2genome:local exon 531200 531916 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 531200 531916 1173 - . alignment_id 0 ; Query GL50803_4692-t26_1-p1 ; Align 531917 1 717 utg731_pilon exonerate:protein2genome:local gene 223955 224367 583 + . gene_id 0 ; sequence GL50803_4705-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 223955 224367 . + . utg731_pilon exonerate:protein2genome:local exon 223955 224367 . + . insertions 3 ; deletions 0 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 223955 224367 583 + . alignment_id 0 ; Query GL50803_4705-t26_1-p1 ; Align 223955 1 21 ; Align 223978 8 258 ; Align 224239 94 129 utg731_pilon exonerate:protein2genome:local gene 221886 223361 2130 - . gene_id 0 ; sequence GL50803_4708-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 221886 223361 . - . utg731_pilon exonerate:protein2genome:local exon 221886 223361 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 221886 223361 2130 - . alignment_id 0 ; Query GL50803_4708-t26_1-p1 ; Align 223362 1 1236 ; Align 222123 413 237 utg308_pilon exonerate:protein2genome:local gene 947723 948634 1337 + . gene_id 0 ; sequence GL50803_4711-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 947723 948634 . + . utg308_pilon exonerate:protein2genome:local exon 947723 948634 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 947723 948634 1337 + . alignment_id 0 ; Query GL50803_4711-t26_1-p1 ; Align 947723 1 912 utg47_pilon exonerate:protein2genome:local gene 1307026 1307424 460 - . gene_id 0 ; sequence GL50803_4764-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1307026 1307424 . - . utg47_pilon exonerate:protein2genome:local exon 1307026 1307424 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1307026 1307424 460 - . alignment_id 0 ; Query GL50803_4764-t26_1-p1 ; Align 1307425 9 399 utg47_pilon exonerate:protein2genome:local gene 1303750 1304663 1115 + . gene_id 0 ; sequence GL50803_4767-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1303750 1304663 . + . utg47_pilon exonerate:protein2genome:local exon 1303750 1304663 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1303750 1304663 1115 + . alignment_id 0 ; Query GL50803_4767-t26_1-p1 ; Align 1303750 2 45 ; Align 1303797 17 699 ; Align 1304496 251 168 utg47_pilon exonerate:protein2genome:local gene 1302013 1303789 2450 - . gene_id 0 ; sequence GL50803_4768-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1302013 1303789 . - . utg47_pilon exonerate:protein2genome:local exon 1302013 1303789 . - . insertions 0 ; deletions 2 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1302013 1303789 2450 - . alignment_id 0 ; Query GL50803_4768-t26_1-p1 ; Align 1303790 1 972 ; Align 1302818 327 402 ; Align 1302415 461 402 utg265_pilon exonerate:protein2genome:local gene 652432 654093 2537 + . gene_id 0 ; sequence GL50803_4789-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 652432 654093 . + . utg265_pilon exonerate:protein2genome:local exon 652432 654093 . + . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 652432 654093 2537 + . alignment_id 0 ; Query GL50803_4789-t26_1-p1 ; Align 652432 1 855 ; Align 653293 286 801 utg349_pilon exonerate:protein2genome:local gene 201023 201382 583 + . gene_id 0 ; sequence GL50803_480-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 201023 201382 . + . utg349_pilon exonerate:protein2genome:local exon 201023 201382 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 201023 201382 583 + . alignment_id 0 ; Query GL50803_480-t26_1-p1 ; Align 201023 1 360 utg308_pilon exonerate:protein2genome:local gene 348710 349525 1330 + . gene_id 0 ; sequence GL50803_4812-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 348710 349525 . + . utg308_pilon exonerate:protein2genome:local exon 348710 349525 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 348710 349525 1330 + . alignment_id 0 ; Query GL50803_4812-t26_1-p1 ; Align 348710 1 816 utg308_pilon exonerate:protein2genome:local gene 352045 352257 280 - . gene_id 0 ; sequence GL50803_4816-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 352045 352257 . - . utg308_pilon exonerate:protein2genome:local exon 352045 352257 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 352045 352257 280 - . alignment_id 0 ; Query GL50803_4816-t26_1-p1 ; Align 352258 1 213 utg308_pilon exonerate:protein2genome:local gene 352349 354850 2813 + . gene_id 0 ; sequence GL50803_4819-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 352349 354850 . + . utg308_pilon exonerate:protein2genome:local exon 352349 354850 . + . insertions 9 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 352349 354850 2813 + . alignment_id 0 ; Query GL50803_4819-t26_1-p1 ; Align 352349 4 2316 ; Align 354665 777 63 ; Align 354734 798 24 ; Align 354761 806 90 utg47_pilon exonerate:protein2genome:local gene 2172225 2172710 630 + . gene_id 0 ; sequence GL50803_4820-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2172225 2172710 . + . utg47_pilon exonerate:protein2genome:local exon 2172225 2172710 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2172225 2172710 630 + . alignment_id 0 ; Query GL50803_4820-t26_1-p1 ; Align 2172225 1 381 ; Align 2172609 128 102 utg308_pilon exonerate:protein2genome:local gene 354860 355345 630 - . gene_id 0 ; sequence GL50803_4820-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 354860 355345 . - . utg308_pilon exonerate:protein2genome:local exon 354860 355345 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 354860 355345 630 - . alignment_id 0 ; Query GL50803_4820-t26_1-p1 ; Align 355346 1 381 ; Align 354962 128 102 utg731_pilon exonerate:protein2genome:local gene 969080 971212 2769 + . gene_id 0 ; sequence GL50803_4837-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 969080 971212 . + . utg731_pilon exonerate:protein2genome:local exon 969080 971212 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 969080 971212 2769 + . alignment_id 0 ; Query GL50803_4837-t26_1-p1 ; Align 969080 1 2133 utg731_pilon exonerate:protein2genome:local gene 966766 969030 2842 + . gene_id 0 ; sequence GL50803_4838-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 966766 967852 . + . utg731_pilon exonerate:protein2genome:local exon 966766 967852 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 967853 967854 . + . intron_id 1 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local intron 967853 967882 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 967881 967882 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 967883 969030 . + . utg731_pilon exonerate:protein2genome:local exon 967883 969030 . + . insertions 0 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 966766 969030 2842 + . alignment_id 0 ; Query GL50803_4838-t26_1-p1 ; Align 966766 32 1086 ; Align 967885 395 84 ; Align 967969 425 54 ; Align 968023 445 1008 utg308_pilon exonerate:protein2genome:local gene 679496 681178 2498 + . gene_id 0 ; sequence GL50803_4843-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 679496 681178 . + . utg308_pilon exonerate:protein2genome:local exon 679496 681178 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 679496 681178 2498 + . alignment_id 0 ; Query GL50803_4843-t26_1-p1 ; Align 679496 1 1683 utg308_pilon exonerate:protein2genome:local gene 676364 678649 2649 - . gene_id 0 ; sequence GL50803_4846-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 676364 678649 . - . utg308_pilon exonerate:protein2genome:local exon 676364 678649 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 676364 678649 2649 - . alignment_id 0 ; Query GL50803_4846-t26_1-p1 ; Align 678650 1 2286 utg308_pilon exonerate:protein2genome:local gene 673800 674378 720 + . gene_id 0 ; sequence GL50803_4849-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 673800 674378 . + . utg308_pilon exonerate:protein2genome:local exon 673800 674378 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 673800 674378 720 + . alignment_id 0 ; Query GL50803_4849-t26_1-p1 ; Align 673800 1 579 utg308_pilon exonerate:protein2genome:local gene 670026 671378 2128 + . gene_id 0 ; sequence GL50803_4852-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 670026 671378 . + . utg308_pilon exonerate:protein2genome:local exon 670026 671378 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 670026 671378 2128 + . alignment_id 0 ; Query GL50803_4852-t26_1-p1 ; Align 670026 1 1353 utg349_pilon exonerate:protein2genome:local gene 257373 257723 389 - . gene_id 0 ; sequence GL50803_4873-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 257373 257723 . - . utg349_pilon exonerate:protein2genome:local exon 257373 257723 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 257373 257723 389 - . alignment_id 0 ; Query GL50803_4873-t26_1-p1 ; Align 257724 1 351 utg349_pilon exonerate:protein2genome:local gene 263972 266824 3479 - . gene_id 0 ; sequence GL50803_4883-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 263972 266824 . - . utg349_pilon exonerate:protein2genome:local exon 263972 266824 . - . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 263972 266824 3479 - . alignment_id 0 ; Query GL50803_4883-t26_1-p1 ; Align 266825 506 1815 ; Align 265010 1113 1038 utg18_pilon exonerate:protein2genome:local gene 396769 397728 1516 + . gene_id 0 ; sequence GL50803_4897-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 396769 397728 . + . utg18_pilon exonerate:protein2genome:local exon 396769 397728 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 396769 397728 1516 + . alignment_id 0 ; Query GL50803_4897-t26_1-p1 ; Align 396769 1 960 utg731_pilon exonerate:protein2genome:local gene 1440186 1441661 2048 - . gene_id 0 ; sequence GL50803_4911-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1440186 1441661 . - . utg731_pilon exonerate:protein2genome:local exon 1440186 1441661 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1440186 1441661 2048 - . alignment_id 0 ; Query GL50803_4911-t26_1-p1 ; Align 1441662 3 681 ; Align 1440981 232 795 utg731_pilon exonerate:protein2genome:local gene 1441733 1442620 1333 - . gene_id 0 ; sequence GL50803_4912-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1441733 1442620 . - . utg731_pilon exonerate:protein2genome:local exon 1441733 1442620 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1441733 1442620 1333 - . alignment_id 0 ; Query GL50803_4912-t26_1-p1 ; Align 1442621 1 888 utg47_pilon exonerate:protein2genome:local gene 194559 194822 344 - . gene_id 0 ; sequence GL50803_4917-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 194559 194822 . - . utg47_pilon exonerate:protein2genome:local exon 194559 194822 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 194559 194822 344 - . alignment_id 0 ; Query GL50803_4917-t26_1-p1 ; Align 194823 1 264 utg11_pilon exonerate:protein2genome:local gene 1488756 1489175 737 + . gene_id 0 ; sequence GL50803_4928-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1488756 1489175 . + . utg11_pilon exonerate:protein2genome:local exon 1488756 1489175 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1488756 1489175 737 + . alignment_id 0 ; Query GL50803_4928-t26_1-p1 ; Align 1488756 1 420 utg18_pilon exonerate:protein2genome:local gene 332305 332883 670 - . gene_id 0 ; sequence GL50803_4936-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 332305 332883 . - . utg18_pilon exonerate:protein2genome:local exon 332305 332883 . - . insertions 3 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 332305 332883 670 - . alignment_id 0 ; Query GL50803_4936-t26_1-p1 ; Align 332884 2 255 ; Align 332626 87 321 utg212_pilon exonerate:protein2genome:local gene 476396 476986 756 + . gene_id 0 ; sequence GL50803_4946-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 476396 476986 . + . utg212_pilon exonerate:protein2genome:local exon 476396 476986 . + . insertions 0 ; deletions 4 utg212_pilon exonerate:protein2genome:local similarity 476396 476986 756 + . alignment_id 0 ; Query GL50803_4946-t26_1-p1 ; Align 476396 7 132 ; Align 476528 55 459 utg212_pilon exonerate:protein2genome:local gene 478097 478660 992 + . gene_id 0 ; sequence GL50803_4950-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 478097 478660 . + . utg212_pilon exonerate:protein2genome:local exon 478097 478660 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 478097 478660 992 + . alignment_id 0 ; Query GL50803_4950-t26_1-p1 ; Align 478097 1 564 utg212_pilon exonerate:protein2genome:local gene 485519 485812 437 - . gene_id 0 ; sequence GL50803_4954-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 485519 485812 . - . utg212_pilon exonerate:protein2genome:local exon 485519 485812 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 485519 485812 437 - . alignment_id 0 ; Query GL50803_4954-t26_1-p1 ; Align 485813 1 294 utg47_pilon exonerate:protein2genome:local gene 12990 16100 3828 + . gene_id 0 ; sequence GL50803_4959-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 12990 16100 . + . utg47_pilon exonerate:protein2genome:local exon 12990 16100 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 12990 16100 3828 + . alignment_id 0 ; Query GL50803_4959-t26_1-p1 ; Align 12990 8 3111 utg47_pilon exonerate:protein2genome:local gene 9464 9649 100 + . gene_id 0 ; sequence GL50803_4961-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 9464 9649 . + . utg47_pilon exonerate:protein2genome:local exon 9464 9649 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 9464 9649 100 + . alignment_id 0 ; Query GL50803_4961-t26_1-p1 ; Align 9464 6 108 ; Align 9572 44 78 utg364_pilon exonerate:protein2genome:local gene 51425 51610 100 - . gene_id 0 ; sequence GL50803_4961-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 51425 51610 . - . utg364_pilon exonerate:protein2genome:local exon 51425 51610 . - . insertions 0 ; deletions 2 utg364_pilon exonerate:protein2genome:local similarity 51425 51610 100 - . alignment_id 0 ; Query GL50803_4961-t26_1-p1 ; Align 51611 6 108 ; Align 51503 44 78 utg364_pilon exonerate:protein2genome:local gene 52874 53869 1132 + . gene_id 0 ; sequence GL50803_4964-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 52874 53869 . + . utg364_pilon exonerate:protein2genome:local exon 52874 53869 . + . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 52874 53869 1132 + . alignment_id 0 ; Query GL50803_4964-t26_1-p1 ; Align 52874 9 996 utg99_pilon exonerate:protein2genome:local gene 341768 342922 1799 + . gene_id 0 ; sequence GL50803_4977-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 341768 342922 . + . utg99_pilon exonerate:protein2genome:local exon 341768 342922 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 341768 342922 1799 + . alignment_id 0 ; Query GL50803_4977-t26_1-p1 ; Align 341768 1 1155 utg731_pilon exonerate:protein2genome:local gene 296724 297317 763 + . gene_id 0 ; sequence GL50803_4984-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 296724 297317 . + . utg731_pilon exonerate:protein2genome:local exon 296724 297317 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 296724 297317 763 + . alignment_id 0 ; Query GL50803_4984-t26_1-p1 ; Align 296724 4 594 utg731_pilon exonerate:protein2genome:local gene 296242 296667 616 - . gene_id 0 ; sequence GL50803_4985-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 296242 296667 . - . utg731_pilon exonerate:protein2genome:local exon 296242 296667 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 296242 296667 616 - . alignment_id 0 ; Query GL50803_4985-t26_1-p1 ; Align 296668 1 426 utg308_pilon exonerate:protein2genome:local gene 54881 56620 2144 - . gene_id 0 ; sequence GL50803_5000-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 54881 56620 . - . utg308_pilon exonerate:protein2genome:local exon 54881 56620 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 54881 56620 2144 - . alignment_id 0 ; Query GL50803_5000-t26_1-p1 ; Align 56621 531 1740 utg308_pilon exonerate:protein2genome:local gene 52761 54212 1834 - . gene_id 0 ; sequence GL50803_5002-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 52761 54212 . - . utg308_pilon exonerate:protein2genome:local exon 52761 54212 . - . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 52761 54212 1834 - . alignment_id 0 ; Query GL50803_5002-t26_1-p1 ; Align 54213 1 783 ; Align 53430 263 18 ; Align 53412 270 651 utg212_pilon exonerate:protein2genome:local gene 497939 498967 1707 - . gene_id 0 ; sequence GL50803_5010-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 497939 498967 . - . utg212_pilon exonerate:protein2genome:local exon 497939 498967 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 497939 498967 1707 - . alignment_id 0 ; Query GL50803_5010-t26_1-p1 ; Align 498968 2 1029 utg212_pilon exonerate:protein2genome:local gene 499216 500349 1809 - . gene_id 0 ; sequence GL50803_5012-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 499216 500349 . - . utg212_pilon exonerate:protein2genome:local exon 499216 500349 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 499216 500349 1809 - . alignment_id 0 ; Query GL50803_5012-t26_1-p1 ; Align 500350 1 1134 utg212_pilon exonerate:protein2genome:local gene 616765 617379 1004 - . gene_id 0 ; sequence GL50803_5013-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 616765 617379 . - . utg212_pilon exonerate:protein2genome:local exon 616765 617379 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 616765 617379 1004 - . alignment_id 0 ; Query GL50803_5013-t26_1-p1 ; Align 617380 1 615 utg731_pilon exonerate:protein2genome:local gene 122201 124213 3058 - . gene_id 0 ; sequence GL50803_5062-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 122201 124213 . - . utg731_pilon exonerate:protein2genome:local exon 122201 124213 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 122201 124213 3058 - . alignment_id 0 ; Query GL50803_5062-t26_1-p1 ; Align 124214 1 654 ; Align 123557 219 1356 utg731_pilon exonerate:protein2genome:local gene 121702 122169 476 + . gene_id 0 ; sequence GL50803_5063-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 121702 122169 . + . utg731_pilon exonerate:protein2genome:local exon 121702 122169 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 121702 122169 476 + . alignment_id 0 ; Query GL50803_5063-t26_1-p1 ; Align 121702 10 468 utg47_pilon exonerate:protein2genome:local gene 550337 552151 2578 + . gene_id 0 ; sequence GL50803_5069-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 550337 552151 . + . utg47_pilon exonerate:protein2genome:local exon 550337 552151 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 550337 552151 2578 + . alignment_id 0 ; Query GL50803_5069-t26_1-p1 ; Align 550337 8 318 ; Align 550655 115 639 ; Align 551294 329 858 utg47_pilon exonerate:protein2genome:local gene 552188 553153 1223 + . gene_id 0 ; sequence GL50803_5070-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 552188 553153 . + . utg47_pilon exonerate:protein2genome:local exon 552188 553153 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 552188 553153 1223 + . alignment_id 0 ; Query GL50803_5070-t26_1-p1 ; Align 552188 1 666 ; Align 552860 223 294 utg47_pilon exonerate:protein2genome:local gene 2182113 2182235 139 + . gene_id 0 ; sequence GL50803_5112-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2182113 2182235 . + . utg47_pilon exonerate:protein2genome:local exon 2182113 2182235 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2182113 2182235 139 + . alignment_id 0 ; Query GL50803_5112-t26_1-p1 ; Align 2182113 1 123 utg47_pilon exonerate:protein2genome:local gene 2176741 2177864 998 + . gene_id 0 ; sequence GL50803_5116-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2176741 2177864 . + . utg47_pilon exonerate:protein2genome:local exon 2176741 2177864 . + . insertions 3 ; deletions 2 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 2176741 2177864 998 + . alignment_id 0 ; Query GL50803_5116-t26_1-p1 ; Align 2176741 7 258 ; Align 2177002 93 612 ; Align 2177614 298 135 ; Align 2177751 343 6 ; Align 2177757 346 108 utg212_pilon exonerate:protein2genome:local gene 463185 463340 129 + . gene_id 0 ; sequence GL50803_5119-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 463185 463340 . + . utg212_pilon exonerate:protein2genome:local exon 463185 463340 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 463185 463340 129 + . alignment_id 0 ; Query GL50803_5119-t26_1-p1 ; Align 463185 2 156 utg64_pilon exonerate:protein2genome:local gene 298986 299183 147 + . gene_id 0 ; sequence GL50803_5135-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 298986 299183 . + . utg64_pilon exonerate:protein2genome:local exon 298986 299183 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 298986 299183 147 + . alignment_id 0 ; Query GL50803_5135-t26_1-p1 ; Align 298986 89 198 utg64_pilon exonerate:protein2genome:local gene 285987 286184 147 - . gene_id 0 ; sequence GL50803_5135-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 285987 286184 . - . utg64_pilon exonerate:protein2genome:local exon 285987 286184 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 285987 286184 147 - . alignment_id 0 ; Query GL50803_5135-t26_1-p1 ; Align 286185 89 198 utg212_pilon exonerate:protein2genome:local gene 462136 469484 2812 + . gene_id 0 ; sequence GL50803_5142-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 462136 464188 . + . utg212_pilon exonerate:protein2genome:local exon 462136 464188 . + . insertions 3 ; deletions 0 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local splice5 464189 464190 . + . intron_id 1 ; splice_site "GT" utg212_pilon exonerate:protein2genome:local intron 464189 464467 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 464466 464467 . + . intron_id 0 ; splice_site "AT" utg212_pilon exonerate:protein2genome:local cds 464468 465271 . + . utg212_pilon exonerate:protein2genome:local exon 464468 465271 . + . insertions 18 ; deletions 1 utg212_pilon exonerate:protein2genome:local splice5 465272 465273 . + . intron_id 2 ; splice_site "GT" utg212_pilon exonerate:protein2genome:local intron 465272 469420 . + . intron_id 2 utg212_pilon exonerate:protein2genome:local splice3 469419 469420 . + . intron_id 1 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local cds 469421 469484 . + . utg212_pilon exonerate:protein2genome:local exon 469421 469484 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 462136 469484 2812 + . alignment_id 0 ; Query GL50803_5142-t26_1-p1 ; Align 462136 14 78 ; Align 462215 40 420 ; Align 462636 180 900 ; Align 463539 480 648 ; Align 464469 697 333 ; Align 464802 809 270 ; Align 465075 899 21 ; Align 465108 906 102 ; Align 465213 940 57 ; Align 469422 960 63 utg11_pilon exonerate:protein2genome:local gene 1795372 1795545 177 - . gene_id 0 ; sequence GL50803_5144-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1795372 1795545 . - . utg11_pilon exonerate:protein2genome:local exon 1795372 1795545 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1795372 1795545 177 - . alignment_id 0 ; Query GL50803_5144-t26_1-p1 ; Align 1795546 13 174 utg18_pilon exonerate:protein2genome:local gene 377092 378129 1466 - . gene_id 0 ; sequence GL50803_5158-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 377092 378129 . - . utg18_pilon exonerate:protein2genome:local exon 377092 378129 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 377092 378129 1466 - . alignment_id 0 ; Query GL50803_5158-t26_1-p1 ; Align 378130 1 1038 utg18_pilon exonerate:protein2genome:local gene 373747 374391 945 + . gene_id 0 ; sequence GL50803_5161-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 373747 374391 . + . utg18_pilon exonerate:protein2genome:local exon 373747 374391 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 373747 374391 945 + . alignment_id 0 ; Query GL50803_5161-t26_1-p1 ; Align 373747 1 645 utg18_pilon exonerate:protein2genome:local gene 372218 373717 1916 + . gene_id 0 ; sequence GL50803_5164-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 372218 373717 . + . utg18_pilon exonerate:protein2genome:local exon 372218 373717 . + . insertions 0 ; deletions 5 utg18_pilon exonerate:protein2genome:local similarity 372218 373717 1916 + . alignment_id 0 ; Query GL50803_5164-t26_1-p1 ; Align 372218 3 630 ; Align 372848 217 120 ; Align 372968 258 750 utg18_pilon exonerate:protein2genome:local gene 370520 371992 2258 - . gene_id 0 ; sequence GL50803_5167-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 370520 371992 . - . utg18_pilon exonerate:protein2genome:local exon 370520 371992 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 370520 371992 2258 - . alignment_id 0 ; Query GL50803_5167-t26_1-p1 ; Align 371993 1 1473 utg18_pilon exonerate:protein2genome:local gene 370476 370680 106 - . gene_id 0 ; sequence GL50803_5168-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 370476 370680 . - . utg18_pilon exonerate:protein2genome:local exon 370476 370680 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg18_pilon exonerate:protein2genome:local similarity 370476 370680 106 - . alignment_id 0 ; Query GL50803_5168-t26_1-p1 ; Align 370681 1 165 ; Align 370515 57 39 utg265_pilon exonerate:protein2genome:local gene 358107 359371 1916 - . gene_id 0 ; sequence GL50803_5171-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 358107 359371 . - . utg265_pilon exonerate:protein2genome:local exon 358107 359371 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 358107 359371 1916 - . alignment_id 0 ; Query GL50803_5171-t26_1-p1 ; Align 359372 1 1209 ; Align 358161 405 54 utg265_pilon exonerate:protein2genome:local gene 357542 357850 476 + . gene_id 0 ; sequence GL50803_5173-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 357542 357850 . + . utg265_pilon exonerate:protein2genome:local exon 357542 357850 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 357542 357850 476 + . alignment_id 0 ; Query GL50803_5173-t26_1-p1 ; Align 357542 64 309 utg1966_pilon exonerate:protein2genome:local gene 15112 15420 476 - . gene_id 0 ; sequence GL50803_5173-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 15112 15420 . - . utg1966_pilon exonerate:protein2genome:local exon 15112 15420 . - . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 15112 15420 476 - . alignment_id 0 ; Query GL50803_5173-t26_1-p1 ; Align 15421 64 309 utg1966_pilon exonerate:protein2genome:local gene 23507 23968 658 + . gene_id 0 ; sequence GL50803_5180-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 23507 23968 . + . utg1966_pilon exonerate:protein2genome:local exon 23507 23968 . + . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 23507 23968 658 + . alignment_id 0 ; Query GL50803_5180-t26_1-p1 ; Align 23507 1 462 utg265_pilon exonerate:protein2genome:local gene 344199 344465 286 + . gene_id 0 ; sequence GL50803_5182-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 344199 344465 . + . utg265_pilon exonerate:protein2genome:local exon 344199 344465 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 344199 344465 286 + . alignment_id 0 ; Query GL50803_5182-t26_1-p1 ; Align 344199 1 267 utg1966_pilon exonerate:protein2genome:local gene 28481 28747 286 - . gene_id 0 ; sequence GL50803_5182-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 28481 28747 . - . utg1966_pilon exonerate:protein2genome:local exon 28481 28747 . - . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 28481 28747 286 - . alignment_id 0 ; Query GL50803_5182-t26_1-p1 ; Align 28748 1 267 utg1966_pilon exonerate:protein2genome:local gene 27066 29387 2637 + . gene_id 0 ; sequence GL50803_5183-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 27066 29387 . + . utg1966_pilon exonerate:protein2genome:local exon 27066 29387 . + . insertions 24 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 27066 29387 2637 + . alignment_id 0 ; Query GL50803_5183-t26_1-p1 ; Align 27066 220 1014 ; Align 28092 558 210 ; Align 28314 628 1074 utg11_pilon exonerate:protein2genome:local gene 681634 687113 8683 - . gene_id 0 ; sequence GL50803_5186-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 681634 687113 . - . utg11_pilon exonerate:protein2genome:local exon 681634 687113 . - . insertions 3 ; deletions 1 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 681634 687113 8683 - . alignment_id 0 ; Query GL50803_5186-t26_1-p1 ; Align 687114 1 147 ; Align 686966 50 405 ; Align 686560 185 2127 ; Align 684430 894 1134 ; Align 683296 1273 1662 utg11_pilon exonerate:protein2genome:local gene 679444 680121 1106 - . gene_id 0 ; sequence GL50803_5188-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 679444 680121 . - . utg11_pilon exonerate:protein2genome:local exon 679444 680121 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 679444 680121 1106 - . alignment_id 0 ; Query GL50803_5188-t26_1-p1 ; Align 680122 1 678 utg47_pilon exonerate:protein2genome:local gene 937889 938653 1061 + . gene_id 0 ; sequence GL50803_5206-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 937889 938653 . + . utg47_pilon exonerate:protein2genome:local exon 937889 938653 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 937889 938653 1061 + . alignment_id 0 ; Query GL50803_5206-t26_1-p1 ; Align 937889 1 765 utg47_pilon exonerate:protein2genome:local gene 929804 931153 1776 - . gene_id 0 ; sequence GL50803_5213-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 929804 931153 . - . utg47_pilon exonerate:protein2genome:local exon 929804 931153 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 929804 931153 1776 - . alignment_id 0 ; Query GL50803_5213-t26_1-p1 ; Align 931154 1 1257 ; Align 929897 423 93 utg308_pilon exonerate:protein2genome:local gene 377437 378402 1411 + . gene_id 0 ; sequence GL50803_5246-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 377437 378402 . + . utg308_pilon exonerate:protein2genome:local exon 377437 378402 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 377437 378402 1411 + . alignment_id 0 ; Query GL50803_5246-t26_1-p1 ; Align 377437 1 966 utg308_pilon exonerate:protein2genome:local gene 378429 378902 563 - . gene_id 0 ; sequence GL50803_5247-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 378429 378902 . - . utg308_pilon exonerate:protein2genome:local exon 378429 378902 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 378429 378902 563 - . alignment_id 0 ; Query GL50803_5247-t26_1-p1 ; Align 378903 1 474 utg308_pilon exonerate:protein2genome:local gene 378969 379613 637 - . gene_id 0 ; sequence GL50803_5248-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 378969 379613 . - . utg308_pilon exonerate:protein2genome:local exon 378969 379613 . - . insertions 0 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 378969 379613 637 - . alignment_id 0 ; Query GL50803_5248-t26_1-p1 ; Align 379614 1 24 ; Align 379590 11 531 ; Align 379059 189 90 utg308_pilon exonerate:protein2genome:local gene 379671 380528 1224 - . gene_id 0 ; sequence GL50803_5249-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 379671 380528 . - . utg308_pilon exonerate:protein2genome:local exon 379671 380528 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 379671 380528 1224 - . alignment_id 0 ; Query GL50803_5249-t26_1-p1 ; Align 380529 1 858 utg308_pilon exonerate:protein2genome:local gene 380609 381100 551 + . gene_id 0 ; sequence GL50803_5250-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 380609 381100 . + . utg308_pilon exonerate:protein2genome:local exon 380609 381100 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 380609 381100 551 + . alignment_id 0 ; Query GL50803_5250-t26_1-p1 ; Align 380609 3 492 utg308_pilon exonerate:protein2genome:local gene 386736 387041 485 - . gene_id 0 ; sequence GL50803_5258-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 386736 387041 . - . utg308_pilon exonerate:protein2genome:local exon 386736 387041 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 386736 387041 485 - . alignment_id 0 ; Query GL50803_5258-t26_1-p1 ; Align 387042 1 306 utg11_pilon exonerate:protein2genome:local gene 127065 128994 2068 - . gene_id 0 ; sequence GL50803_5272-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 127065 128994 . - . utg11_pilon exonerate:protein2genome:local exon 127065 128994 . - . insertions 0 ; deletions 9 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 127065 128994 2068 - . alignment_id 0 ; Query GL50803_5272-t26_1-p1 ; Align 128995 1 87 ; Align 128907 30 561 ; Align 128346 218 138 ; Align 128208 267 393 ; Align 127815 401 474 ; Align 127341 560 27 ; Align 127314 570 249 utg11_pilon exonerate:protein2genome:local gene 125989 127065 1234 - . gene_id 0 ; sequence GL50803_5273-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 125989 127065 . - . utg11_pilon exonerate:protein2genome:local exon 125989 127065 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 125989 127065 1234 - . alignment_id 0 ; Query GL50803_5273-t26_1-p1 ; Align 127066 1 87 ; Align 126979 31 990 utg11_pilon exonerate:protein2genome:local gene 123927 125957 2561 - . gene_id 0 ; sequence GL50803_5274-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 123927 125957 . - . utg11_pilon exonerate:protein2genome:local exon 123927 125957 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 123927 125957 2561 - . alignment_id 0 ; Query GL50803_5274-t26_1-p1 ; Align 125958 1 2031 utg11_pilon exonerate:protein2genome:local gene 121327 121797 760 - . gene_id 0 ; sequence GL50803_5277-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 121327 121797 . - . utg11_pilon exonerate:protein2genome:local exon 121327 121797 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 121327 121797 760 - . alignment_id 0 ; Query GL50803_5277-t26_1-p1 ; Align 121798 1 471 utg11_pilon exonerate:protein2genome:local gene 121324 121554 258 + . gene_id 0 ; sequence GL50803_5278-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 121324 121554 . + . utg11_pilon exonerate:protein2genome:local exon 121324 121554 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 121324 121554 258 + . alignment_id 0 ; Query GL50803_5278-t26_1-p1 ; Align 121324 2 231 utg308_pilon exonerate:protein2genome:local gene 561861 564338 3864 + . gene_id 0 ; sequence GL50803_5294-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 561861 564338 . + . utg308_pilon exonerate:protein2genome:local exon 561861 564338 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 561861 564338 3864 + . alignment_id 0 ; Query GL50803_5294-t26_1-p1 ; Align 561861 1 2478 utg11_pilon exonerate:protein2genome:local gene 996343 998811 3041 + . gene_id 0 ; sequence GL50803_5305-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 996343 998811 . + . utg11_pilon exonerate:protein2genome:local exon 996343 998811 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 996343 998811 3041 + . alignment_id 0 ; Query GL50803_5305-t26_1-p1 ; Align 996343 1 2469 utg11_pilon exonerate:protein2genome:local gene 990972 996005 5893 - . gene_id 0 ; sequence GL50803_5307-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 991922 996005 . - . utg11_pilon exonerate:protein2genome:local exon 991922 996005 . - . insertions 27 ; deletions 2 utg11_pilon exonerate:protein2genome:local splice5 991920 991921 . - . intron_id 1 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 991892 991921 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 991892 991893 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 990972 991891 . - . utg11_pilon exonerate:protein2genome:local exon 990972 991891 . - . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 990972 996005 5893 - . alignment_id 0 ; Query GL50803_5307-t26_1-p1 ; Align 996006 1 744 ; Align 995256 249 15 ; Align 995232 254 147 ; Align 995085 304 1233 ; Align 993840 715 1899 ; Align 991941 1349 18 ; Align 991890 1356 114 ; Align 991773 1394 93 ; Align 991680 1426 708 utg99_pilon exonerate:protein2genome:local gene 163954 166013 2682 + . gene_id 0 ; sequence GL50803_5324-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 163954 166013 . + . utg99_pilon exonerate:protein2genome:local exon 163954 166013 . + . insertions 3 ; deletions 1 ; frameshifts 2 utg99_pilon exonerate:protein2genome:local similarity 163954 166013 2682 + . alignment_id 0 ; Query GL50803_5324-t26_1-p1 ; Align 163954 1 1893 ; Align 165850 632 69 ; Align 165921 656 93 utg99_pilon exonerate:protein2genome:local gene 167159 167581 730 + . gene_id 0 ; sequence GL50803_5328-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 167159 167581 . + . utg99_pilon exonerate:protein2genome:local exon 167159 167581 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 167159 167581 730 + . alignment_id 0 ; Query GL50803_5328-t26_1-p1 ; Align 167159 1 423 utg99_pilon exonerate:protein2genome:local gene 169862 170320 785 - . gene_id 0 ; sequence GL50803_5333-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 169862 170320 . - . utg99_pilon exonerate:protein2genome:local exon 169862 170320 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 169862 170320 785 - . alignment_id 0 ; Query GL50803_5333-t26_1-p1 ; Align 170321 1 459 utg212_pilon exonerate:protein2genome:local gene 330466 332061 2451 - . gene_id 0 ; sequence GL50803_5345-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 330466 332061 . - . utg212_pilon exonerate:protein2genome:local exon 330466 332061 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 330466 332061 2451 - . alignment_id 0 ; Query GL50803_5345-t26_1-p1 ; Align 332062 1 1596 utg212_pilon exonerate:protein2genome:local gene 328958 330417 2111 + . gene_id 0 ; sequence GL50803_5346-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 328958 330417 . + . utg212_pilon exonerate:protein2genome:local exon 328958 330417 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 328958 330417 2111 + . alignment_id 0 ; Query GL50803_5346-t26_1-p1 ; Align 328958 6 975 ; Align 329933 332 63 ; Align 329996 354 3 ; Align 330001 355 417 utg212_pilon exonerate:protein2genome:local gene 327467 328906 1651 + . gene_id 0 ; sequence GL50803_5347-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 327467 328906 . + . utg212_pilon exonerate:protein2genome:local exon 327467 328906 . + . insertions 3 ; deletions 2 ; frameshifts 3 utg212_pilon exonerate:protein2genome:local similarity 327467 328906 1651 + . alignment_id 0 ; Query GL50803_5347-t26_1-p1 ; Align 327467 1 117 ; Align 327585 40 60 ; Align 327647 61 450 ; Align 328097 212 342 ; Align 328442 326 465 utg47_pilon exonerate:protein2genome:local gene 1736001 1736093 115 - . gene_id 0 ; sequence GL50803_5357-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1736001 1736093 . - . utg47_pilon exonerate:protein2genome:local exon 1736001 1736093 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1736001 1736093 115 - . alignment_id 0 ; Query GL50803_5357-t26_1-p1 ; Align 1736094 1 93 utg47_pilon exonerate:protein2genome:local gene 1735032 1735964 1526 + . gene_id 0 ; sequence GL50803_5358-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1735032 1735964 . + . utg47_pilon exonerate:protein2genome:local exon 1735032 1735964 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1735032 1735964 1526 + . alignment_id 0 ; Query GL50803_5358-t26_1-p1 ; Align 1735032 1 933 utg47_pilon exonerate:protein2genome:local gene 1733208 1734998 2415 + . gene_id 0 ; sequence GL50803_5359-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1733208 1734998 . + . utg47_pilon exonerate:protein2genome:local exon 1733208 1734998 . + . insertions 6 ; deletions 0 ; frameshifts 6 utg47_pilon exonerate:protein2genome:local similarity 1733208 1734998 2415 + . alignment_id 0 ; Query GL50803_5359-t26_1-p1 ; Align 1733208 1 1116 ; Align 1734325 373 249 ; Align 1734577 456 9 ; Align 1734591 459 231 ; Align 1734825 536 174 utg11_pilon exonerate:protein2genome:local gene 497486 498202 1087 + . gene_id 0 ; sequence GL50803_5374-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 497486 498202 . + . utg11_pilon exonerate:protein2genome:local exon 497486 498202 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 497486 498202 1087 + . alignment_id 0 ; Query GL50803_5374-t26_1-p1 ; Align 497486 1 717 utg11_pilon exonerate:protein2genome:local gene 498324 499538 2067 - . gene_id 0 ; sequence GL50803_5375-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 498324 499538 . - . utg11_pilon exonerate:protein2genome:local exon 498324 499538 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 498324 499538 2067 - . alignment_id 0 ; Query GL50803_5375-t26_1-p1 ; Align 499539 1 1215 utg11_pilon exonerate:protein2genome:local gene 1690694 1691593 1187 + . gene_id 0 ; sequence GL50803_5425-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1690694 1691593 . + . utg11_pilon exonerate:protein2genome:local exon 1690694 1691593 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1690694 1691593 1187 + . alignment_id 0 ; Query GL50803_5425-t26_1-p1 ; Align 1690694 1 900 utg11_pilon exonerate:protein2genome:local gene 1690345 1690473 135 - . gene_id 0 ; sequence GL50803_5426-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1690345 1690473 . - . utg11_pilon exonerate:protein2genome:local exon 1690345 1690473 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1690345 1690473 135 - . alignment_id 0 ; Query GL50803_5426-t26_1-p1 ; Align 1690474 1 129 utg731_pilon exonerate:protein2genome:local gene 498411 499499 1743 + . gene_id 0 ; sequence GL50803_5435-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 498411 499499 . + . utg731_pilon exonerate:protein2genome:local exon 498411 499499 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 498411 499499 1743 + . alignment_id 0 ; Query GL50803_5435-t26_1-p1 ; Align 498411 1 906 ; Align 499320 303 180 utg731_pilon exonerate:protein2genome:local gene 499614 502769 4425 + . gene_id 0 ; sequence GL50803_5437-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 499614 502769 . + . utg731_pilon exonerate:protein2genome:local exon 499614 502769 . + . insertions 0 ; deletions 8 ; frameshifts 6 utg731_pilon exonerate:protein2genome:local similarity 499614 502769 4425 + . alignment_id 0 ; Query GL50803_5437-t26_1-p1 ; Align 499614 1 606 ; Align 500222 204 153 ; Align 500375 258 570 ; Align 500945 449 234 ; Align 501180 527 348 ; Align 501528 645 477 ; Align 502007 805 315 ; Align 502323 910 447 utg308_pilon exonerate:protein2genome:local gene 712095 712229 163 + . gene_id 0 ; sequence GL50803_5443-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 712095 712229 . + . utg308_pilon exonerate:protein2genome:local exon 712095 712229 . + . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 712095 712229 163 + . alignment_id 0 ; Query GL50803_5443-t26_1-p1 ; Align 712095 21 102 ; Align 712197 56 33 utg308_pilon exonerate:protein2genome:local gene 718897 719031 167 + . gene_id 0 ; sequence GL50803_5448-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 718897 719031 . + . utg308_pilon exonerate:protein2genome:local exon 718897 719031 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 718897 719031 167 + . alignment_id 0 ; Query GL50803_5448-t26_1-p1 ; Align 718897 1 135 utg308_pilon exonerate:protein2genome:local gene 719701 720012 465 - . gene_id 0 ; sequence GL50803_5450-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 719701 720012 . - . utg308_pilon exonerate:protein2genome:local exon 719701 720012 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 719701 720012 465 - . alignment_id 0 ; Query GL50803_5450-t26_1-p1 ; Align 720013 28 312 utg47_pilon exonerate:protein2genome:local gene 2162367 2162642 279 - . gene_id 0 ; sequence GL50803_5455-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2162367 2162642 . - . utg47_pilon exonerate:protein2genome:local exon 2162367 2162642 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2162367 2162642 279 - . alignment_id 0 ; Query GL50803_5455-t26_1-p1 ; Align 2162643 2 276 utg47_pilon exonerate:protein2genome:local gene 2161846 2163648 2449 + . gene_id 0 ; sequence GL50803_5456-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2161846 2163648 . + . utg47_pilon exonerate:protein2genome:local exon 2161846 2163648 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2161846 2163648 2449 + . alignment_id 0 ; Query GL50803_5456-t26_1-p1 ; Align 2161846 1 1803 utg47_pilon exonerate:protein2genome:local gene 2160200 2161309 1418 + . gene_id 0 ; sequence GL50803_5458-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2160200 2161309 . + . utg47_pilon exonerate:protein2genome:local exon 2160200 2161309 . + . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 2160200 2161309 1418 + . alignment_id 0 ; Query GL50803_5458-t26_1-p1 ; Align 2160200 1 306 ; Align 2160506 105 372 ; Align 2160878 230 432 utg47_pilon exonerate:protein2genome:local gene 2155369 2156706 2100 - . gene_id 0 ; sequence GL50803_5462-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2155369 2156706 . - . utg47_pilon exonerate:protein2genome:local exon 2155369 2156706 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2155369 2156706 2100 - . alignment_id 0 ; Query GL50803_5462-t26_1-p1 ; Align 2156707 1 1338 utg349_pilon exonerate:protein2genome:local gene 1501719 1504544 3696 - . gene_id 0 ; sequence GL50803_5468-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1501719 1504544 . - . utg349_pilon exonerate:protein2genome:local exon 1501719 1504544 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1501719 1504544 3696 - . alignment_id 0 ; Query GL50803_5468-t26_1-p1 ; Align 1504545 1 2826 utg349_pilon exonerate:protein2genome:local gene 1508890 1509624 883 - . gene_id 0 ; sequence GL50803_5474-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1508890 1509624 . - . utg349_pilon exonerate:protein2genome:local exon 1508890 1509624 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1508890 1509624 883 - . alignment_id 0 ; Query GL50803_5474-t26_1-p1 ; Align 1509625 94 735 utg731_pilon exonerate:protein2genome:local gene 711629 712045 374 - . gene_id 0 ; sequence GL50803_5488-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 711629 712045 . - . utg731_pilon exonerate:protein2genome:local exon 711629 712045 . - . insertions 3 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 711629 712045 374 - . alignment_id 0 ; Query GL50803_5488-t26_1-p1 ; Align 712046 1 120 ; Align 711926 43 216 ; Align 711707 115 78 utg731_pilon exonerate:protein2genome:local gene 712066 713673 2623 - . gene_id 0 ; sequence GL50803_5489-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 712066 713673 . - . utg731_pilon exonerate:protein2genome:local exon 712066 713673 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 712066 713673 2623 - . alignment_id 0 ; Query GL50803_5489-t26_1-p1 ; Align 713674 1 1608 utg47_pilon exonerate:protein2genome:local gene 1189770 1190420 367 + . gene_id 0 ; sequence GL50803_5497-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1189770 1189933 . + . utg47_pilon exonerate:protein2genome:local exon 1189770 1189933 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1189934 1189935 . + . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1189934 1189972 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1189971 1189972 . + . intron_id 0 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1189973 1190420 . + . utg47_pilon exonerate:protein2genome:local exon 1189973 1190420 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1189770 1190420 367 + . alignment_id 0 ; Query GL50803_5497-t26_1-p1 ; Align 1189770 1 162 ; Align 1189974 56 324 ; Align 1190298 166 123 utg265_pilon exonerate:protein2genome:local gene 630580 630960 508 - . gene_id 0 ; sequence GL50803_5513-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 630580 630960 . - . utg265_pilon exonerate:protein2genome:local exon 630580 630960 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 630580 630960 508 - . alignment_id 0 ; Query GL50803_5513-t26_1-p1 ; Align 630961 1 381 utg265_pilon exonerate:protein2genome:local gene 630970 631161 221 + . gene_id 0 ; sequence GL50803_5514-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 630970 631161 . + . utg265_pilon exonerate:protein2genome:local exon 630970 631161 . + . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 630970 631161 221 + . alignment_id 0 ; Query GL50803_5514-t26_1-p1 ; Align 630970 1 90 ; Align 631060 32 6 ; Align 631066 36 96 utg265_pilon exonerate:protein2genome:local gene 631164 631526 560 + . gene_id 0 ; sequence GL50803_5515-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 631164 631526 . + . utg265_pilon exonerate:protein2genome:local exon 631164 631526 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 631164 631526 560 + . alignment_id 0 ; Query GL50803_5515-t26_1-p1 ; Align 631164 1 363 utg265_pilon exonerate:protein2genome:local gene 631570 631851 490 - . gene_id 0 ; sequence GL50803_5517-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 631570 631851 . - . utg265_pilon exonerate:protein2genome:local exon 631570 631851 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 631570 631851 490 - . alignment_id 0 ; Query GL50803_5517-t26_1-p1 ; Align 631852 1 282 utg265_pilon exonerate:protein2genome:local gene 634027 637023 3324 + . gene_id 0 ; sequence GL50803_5522-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 634027 637023 . + . utg265_pilon exonerate:protein2genome:local exon 634027 637023 . + . insertions 6 ; deletions 5 utg265_pilon exonerate:protein2genome:local similarity 634027 637023 3324 + . alignment_id 0 ; Query GL50803_5522-t26_1-p1 ; Align 634027 6 399 ; Align 634426 140 282 ; Align 634708 235 411 ; Align 635122 372 270 ; Align 635392 463 492 ; Align 635884 628 114 ; Align 635998 667 456 ; Align 636457 819 567 utg47_pilon exonerate:protein2genome:local gene 107742 108056 350 + . gene_id 0 ; sequence GL50803_5532-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 107742 108056 . + . utg47_pilon exonerate:protein2genome:local exon 107742 108056 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 107742 108056 350 + . alignment_id 0 ; Query GL50803_5532-t26_1-p1 ; Align 107742 1 315 utg47_pilon exonerate:protein2genome:local gene 108185 109996 2341 - . gene_id 0 ; sequence GL50803_5533-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 108185 109996 . - . utg47_pilon exonerate:protein2genome:local exon 108185 109996 . - . insertions 15 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 108185 109996 2341 - . alignment_id 0 ; Query GL50803_5533-t26_1-p1 ; Align 109997 1 471 ; Align 109526 159 564 ; Align 108953 347 33 ; Align 108920 359 18 ; Align 108902 366 222 ; Align 108674 440 489 utg47_pilon exonerate:protein2genome:local gene 110056 110850 1224 - . gene_id 0 ; sequence GL50803_5534-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 110056 110850 . - . utg47_pilon exonerate:protein2genome:local exon 110056 110850 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 110056 110850 1224 - . alignment_id 0 ; Query GL50803_5534-t26_1-p1 ; Align 110851 1 795 utg47_pilon exonerate:protein2genome:local gene 110878 112899 2658 - . gene_id 0 ; sequence GL50803_5536-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 110878 112899 . - . utg47_pilon exonerate:protein2genome:local exon 110878 112899 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 110878 112899 2658 - . alignment_id 0 ; Query GL50803_5536-t26_1-p1 ; Align 112900 1 1836 ; Align 111064 614 186 utg18_pilon exonerate:protein2genome:local gene 227037 227195 193 - . gene_id 0 ; sequence GL50803_5542-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 227037 227195 . - . utg18_pilon exonerate:protein2genome:local exon 227037 227195 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 227037 227195 193 - . alignment_id 0 ; Query GL50803_5542-t26_1-p1 ; Align 227196 1 159 utg18_pilon exonerate:protein2genome:local gene 226855 229173 3486 + . gene_id 0 ; sequence GL50803_5543-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 226855 229173 . + . utg18_pilon exonerate:protein2genome:local exon 226855 229173 . + . insertions 6 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 226855 229173 3486 + . alignment_id 0 ; Query GL50803_5543-t26_1-p1 ; Align 226855 738 681 ; Align 227542 965 1632 utg18_pilon exonerate:protein2genome:local gene 60580 62136 1893 + . gene_id 0 ; sequence GL50803_5553-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 60580 62136 . + . utg18_pilon exonerate:protein2genome:local exon 60580 62136 . + . insertions 3 ; deletions 4 utg18_pilon exonerate:protein2genome:local similarity 60580 62136 1893 + . alignment_id 0 ; Query GL50803_5553-t26_1-p1 ; Align 60580 1 393 ; Align 60973 133 789 ; Align 61765 396 327 ; Align 62092 508 45 utg18_pilon exonerate:protein2genome:local gene 62524 63828 1801 + . gene_id 0 ; sequence GL50803_5554-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 62524 63828 . + . utg18_pilon exonerate:protein2genome:local exon 62524 63828 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 62524 63828 1801 + . alignment_id 0 ; Query GL50803_5554-t26_1-p1 ; Align 62524 1 1305 utg349_pilon exonerate:protein2genome:local gene 667423 669763 3386 - . gene_id 0 ; sequence GL50803_5567-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 667423 669763 . - . utg349_pilon exonerate:protein2genome:local exon 667423 669763 . - . insertions 3 ; deletions 4 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 667423 669763 3386 - . alignment_id 0 ; Query GL50803_5567-t26_1-p1 ; Align 669764 1 1026 ; Align 668738 347 27 ; Align 668708 356 1002 ; Align 667705 690 282 utg349_pilon exonerate:protein2genome:local gene 666934 667392 615 + . gene_id 0 ; sequence GL50803_5568-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 666934 667392 . + . utg349_pilon exonerate:protein2genome:local exon 666934 667392 . + . insertions 0 ; deletions 1 ; frameshifts 3 utg349_pilon exonerate:protein2genome:local similarity 666934 667392 615 + . alignment_id 0 ; Query GL50803_5568-t26_1-p1 ; Align 666934 1 159 ; Align 667095 55 126 ; Align 667222 97 171 utg265_pilon exonerate:protein2genome:local gene 364442 364960 892 + . gene_id 0 ; sequence GL50803_5593-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 364442 364960 . + . utg265_pilon exonerate:protein2genome:local exon 364442 364960 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 364442 364960 892 + . alignment_id 0 ; Query GL50803_5593-t26_1-p1 ; Align 364442 1 519 utg1966_pilon exonerate:protein2genome:local gene 8007 8525 892 - . gene_id 0 ; sequence GL50803_5593-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 8007 8525 . - . utg1966_pilon exonerate:protein2genome:local exon 8007 8525 . - . insertions 0 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 8007 8525 892 - . alignment_id 0 ; Query GL50803_5593-t26_1-p1 ; Align 8526 1 519 utg349_pilon exonerate:protein2genome:local gene 72799 75673 3714 - . gene_id 0 ; sequence GL50803_5603-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 72799 75673 . - . utg349_pilon exonerate:protein2genome:local exon 72799 75673 . - . insertions 0 ; deletions 3 ; frameshifts 4 utg349_pilon exonerate:protein2genome:local similarity 72799 75673 3714 - . alignment_id 0 ; Query GL50803_5603-t26_1-p1 ; Align 75674 1 1398 ; Align 74274 468 114 ; Align 74160 507 1173 ; Align 72985 899 186 utg349_pilon exonerate:protein2genome:local gene 72298 72699 590 - . gene_id 0 ; sequence GL50803_5604-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 72298 72699 . - . utg349_pilon exonerate:protein2genome:local exon 72298 72699 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 72298 72699 590 - . alignment_id 0 ; Query GL50803_5604-t26_1-p1 ; Align 72700 2 402 utg349_pilon exonerate:protein2genome:local gene 69707 70510 1060 - . gene_id 0 ; sequence GL50803_5610-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 69707 70510 . - . utg349_pilon exonerate:protein2genome:local exon 69707 70510 . - . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 69707 70510 1060 - . alignment_id 0 ; Query GL50803_5610-t26_1-p1 ; Align 70511 1 495 ; Align 70016 168 309 utg731_pilon exonerate:protein2genome:local gene 1387520 1388233 1084 + . gene_id 0 ; sequence GL50803_5613-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1387520 1388233 . + . utg731_pilon exonerate:protein2genome:local exon 1387520 1388233 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1387520 1388233 1084 + . alignment_id 0 ; Query GL50803_5613-t26_1-p1 ; Align 1387520 1 714 utg731_pilon exonerate:protein2genome:local gene 1388399 1389448 1421 + . gene_id 0 ; sequence GL50803_5615-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1388399 1389448 . + . utg731_pilon exonerate:protein2genome:local exon 1388399 1389448 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1388399 1389448 1421 + . alignment_id 0 ; Query GL50803_5615-t26_1-p1 ; Align 1388399 1 207 ; Align 1388606 72 843 utg11_pilon exonerate:protein2genome:local gene 1226858 1230034 3919 - . gene_id 0 ; sequence GL50803_5631-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1226858 1230034 . - . utg11_pilon exonerate:protein2genome:local exon 1226858 1230034 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1226858 1230034 3919 - . alignment_id 0 ; Query GL50803_5631-t26_1-p1 ; Align 1230035 1 504 ; Align 1229528 169 2670 utg11_pilon exonerate:protein2genome:local gene 1230140 1231084 1372 + . gene_id 0 ; sequence GL50803_5632-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1230140 1231084 . + . utg11_pilon exonerate:protein2genome:local exon 1230140 1231084 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1230140 1231084 1372 + . alignment_id 0 ; Query GL50803_5632-t26_1-p1 ; Align 1230140 1 675 ; Align 1230818 226 267 utg308_pilon exonerate:protein2genome:local gene 644425 645147 1203 - . gene_id 0 ; sequence GL50803_5638-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 644425 645147 . - . utg308_pilon exonerate:protein2genome:local exon 644425 645147 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 644425 645147 1203 - . alignment_id 0 ; Query GL50803_5638-t26_1-p1 ; Align 645148 1 723 utg308_pilon exonerate:protein2genome:local gene 652693 654744 3345 + . gene_id 0 ; sequence GL50803_5643-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 652693 654744 . + . utg308_pilon exonerate:protein2genome:local exon 652693 654744 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 652693 654744 3345 + . alignment_id 0 ; Query GL50803_5643-t26_1-p1 ; Align 652693 1 2052 utg47_pilon exonerate:protein2genome:local gene 358418 361088 3398 + . gene_id 0 ; sequence GL50803_5648-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 358418 361088 . + . utg47_pilon exonerate:protein2genome:local exon 358418 361088 . + . insertions 9 ; deletions 2 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 358418 361088 3398 + . alignment_id 0 ; Query GL50803_5648-t26_1-p1 ; Align 358418 1 741 ; Align 359165 248 282 ; Align 359450 342 780 ; Align 360232 603 42 ; Align 360276 618 813 utg47_pilon exonerate:protein2genome:local gene 357426 358331 1569 - . gene_id 0 ; sequence GL50803_5649-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 357426 358331 . - . utg47_pilon exonerate:protein2genome:local exon 357426 358331 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 357426 358331 1569 - . alignment_id 0 ; Query GL50803_5649-t26_1-p1 ; Align 358332 27 906 utg64_pilon exonerate:protein2genome:local gene 532735 533481 1060 - . gene_id 0 ; sequence GL50803_5657-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 532735 533481 . - . utg64_pilon exonerate:protein2genome:local exon 532735 533481 . - . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 532735 533481 1060 - . alignment_id 0 ; Query GL50803_5657-t26_1-p1 ; Align 533482 1 387 ; Align 533095 131 360 utg64_pilon exonerate:protein2genome:local gene 533636 534940 2139 - . gene_id 0 ; sequence GL50803_5659-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 533636 534940 . - . utg64_pilon exonerate:protein2genome:local exon 533636 534940 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 533636 534940 2139 - . alignment_id 0 ; Query GL50803_5659-t26_1-p1 ; Align 534941 2 1305 utg64_pilon exonerate:protein2genome:local gene 535753 536460 1197 + . gene_id 0 ; sequence GL50803_5661-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 535753 536460 . + . utg64_pilon exonerate:protein2genome:local exon 535753 536460 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 535753 536460 1197 + . alignment_id 0 ; Query GL50803_5661-t26_1-p1 ; Align 535753 1 708 utg64_pilon exonerate:protein2genome:local gene 542356 542736 552 - . gene_id 0 ; sequence GL50803_5665-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 542356 542736 . - . utg64_pilon exonerate:protein2genome:local exon 542356 542736 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 542356 542736 552 - . alignment_id 0 ; Query GL50803_5665-t26_1-p1 ; Align 542737 1 381 utg349_pilon exonerate:protein2genome:local gene 1050331 1052745 3372 - . gene_id 0 ; sequence GL50803_5672-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1050331 1052745 . - . utg349_pilon exonerate:protein2genome:local exon 1050331 1052745 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1050331 1052745 3372 - . alignment_id 0 ; Query GL50803_5672-t26_1-p1 ; Align 1052746 1 2415 utg64_pilon exonerate:protein2genome:local gene 987045 987977 1304 - . gene_id 0 ; sequence GL50803_5710-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 987045 987977 . - . utg64_pilon exonerate:protein2genome:local exon 987045 987977 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 987045 987977 1304 - . alignment_id 0 ; Query GL50803_5710-t26_1-p1 ; Align 987978 1 933 utg308_pilon exonerate:protein2genome:local gene 594121 595073 1092 - . gene_id 0 ; sequence GL50803_5742-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 594121 595073 . - . utg308_pilon exonerate:protein2genome:local exon 594121 595073 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 594121 595073 1092 - . alignment_id 0 ; Query GL50803_5742-t26_1-p1 ; Align 595074 1 57 ; Align 595015 21 894 utg308_pilon exonerate:protein2genome:local gene 595091 596557 2399 - . gene_id 0 ; sequence GL50803_5744-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 595091 596557 . - . utg308_pilon exonerate:protein2genome:local exon 595091 596557 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 595091 596557 2399 - . alignment_id 0 ; Query GL50803_5744-t26_1-p1 ; Align 596558 2 1467 utg308_pilon exonerate:protein2genome:local gene 598388 600703 3424 - . gene_id 0 ; sequence GL50803_5746-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 598388 600703 . - . utg308_pilon exonerate:protein2genome:local exon 598388 600703 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 598388 600703 3424 - . alignment_id 0 ; Query GL50803_5746-t26_1-p1 ; Align 600704 1 2316 utg308_pilon exonerate:protein2genome:local gene 602486 604513 2841 - . gene_id 0 ; sequence GL50803_5749-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 602486 604513 . - . utg308_pilon exonerate:protein2genome:local exon 602486 604513 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 602486 604513 2841 - . alignment_id 0 ; Query GL50803_5749-t26_1-p1 ; Align 604514 1 2028 utg731_pilon exonerate:protein2genome:local gene 664835 665934 1452 + . gene_id 0 ; sequence GL50803_5768-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 664835 665934 . + . utg731_pilon exonerate:protein2genome:local exon 664835 665934 . + . insertions 3 ; deletions 6 ; frameshifts 8 utg731_pilon exonerate:protein2genome:local similarity 664835 665934 1452 + . alignment_id 0 ; Query GL50803_5768-t26_1-p1 ; Align 664835 1 507 ; Align 665343 171 141 ; Align 665484 219 33 ; Align 665520 230 30 ; Align 665552 241 315 ; Align 665867 349 30 ; Align 665902 359 33 utg731_pilon exonerate:protein2genome:local gene 661629 662855 1938 - . gene_id 0 ; sequence GL50803_5772-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 661629 662855 . - . utg731_pilon exonerate:protein2genome:local exon 661629 662855 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 661629 662855 1938 - . alignment_id 0 ; Query GL50803_5772-t26_1-p1 ; Align 662856 1 1227 utg731_pilon exonerate:protein2genome:local gene 942807 943076 311 - . gene_id 0 ; sequence GL50803_5778-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 942807 943076 . - . utg731_pilon exonerate:protein2genome:local exon 942807 943076 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 942807 943076 311 - . alignment_id 0 ; Query GL50803_5778-t26_1-p1 ; Align 943077 1 270 utg731_pilon exonerate:protein2genome:local gene 943103 943909 976 + . gene_id 0 ; sequence GL50803_5779-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 943103 943909 . + . utg731_pilon exonerate:protein2genome:local exon 943103 943909 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 943103 943909 976 + . alignment_id 0 ; Query GL50803_5779-t26_1-p1 ; Align 943103 1 807 utg731_pilon exonerate:protein2genome:local gene 947158 950409 4858 + . gene_id 0 ; sequence GL50803_5784-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 947158 950409 . + . utg731_pilon exonerate:protein2genome:local exon 947158 950409 . + . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 947158 950409 4858 + . alignment_id 0 ; Query GL50803_5784-t26_1-p1 ; Align 947158 16 3168 ; Align 950326 1075 84 utg731_pilon exonerate:protein2genome:local gene 950512 951180 985 - . gene_id 0 ; sequence GL50803_5785-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 950512 951180 . - . utg731_pilon exonerate:protein2genome:local exon 950512 951180 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 950512 951180 985 - . alignment_id 0 ; Query GL50803_5785-t26_1-p1 ; Align 951181 1 669 utg731_pilon exonerate:protein2genome:local gene 951318 952010 1154 - . gene_id 0 ; sequence GL50803_5786-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 951318 952010 . - . utg731_pilon exonerate:protein2genome:local exon 951318 952010 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 951318 952010 1154 - . alignment_id 0 ; Query GL50803_5786-t26_1-p1 ; Align 952011 1 693 utg731_pilon exonerate:protein2genome:local gene 952021 953421 1749 + . gene_id 0 ; sequence GL50803_5787-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 952021 953421 . + . utg731_pilon exonerate:protein2genome:local exon 952021 953421 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 952021 953421 1749 + . alignment_id 0 ; Query GL50803_5787-t26_1-p1 ; Align 952021 1 492 ; Align 952513 166 909 utg349_pilon exonerate:protein2genome:local gene 736727 738973 3572 + . gene_id 0 ; sequence GL50803_5795-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 736727 738973 . + . utg349_pilon exonerate:protein2genome:local exon 736727 738973 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 736727 738973 3572 + . alignment_id 0 ; Query GL50803_5795-t26_1-p1 ; Align 736727 1 2247 utg349_pilon exonerate:protein2genome:local gene 740097 740891 1311 - . gene_id 0 ; sequence GL50803_5800-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 740097 740891 . - . utg349_pilon exonerate:protein2genome:local exon 740097 740891 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 740097 740891 1311 - . alignment_id 0 ; Query GL50803_5800-t26_1-p1 ; Align 740892 4 795 utg349_pilon exonerate:protein2genome:local gene 744306 744623 533 + . gene_id 0 ; sequence GL50803_5804-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 744306 744623 . + . utg349_pilon exonerate:protein2genome:local exon 744306 744623 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 744306 744623 533 + . alignment_id 0 ; Query GL50803_5804-t26_1-p1 ; Align 744306 1 318 utg349_pilon exonerate:protein2genome:local gene 744628 746589 1842 + . gene_id 0 ; sequence GL50803_5806-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 744628 746589 . + . utg349_pilon exonerate:protein2genome:local exon 744628 746589 . + . insertions 0 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 744628 746589 1842 + . alignment_id 0 ; Query GL50803_5806-t26_1-p1 ; Align 744628 1 1041 ; Align 745669 349 39 ; Align 745708 365 192 ; Align 745900 430 690 utg11_pilon exonerate:protein2genome:local gene 98446 100914 3162 - . gene_id 0 ; sequence GL50803_5809-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 98446 100914 . - . utg11_pilon exonerate:protein2genome:local exon 98446 100914 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 98446 100914 3162 - . alignment_id 0 ; Query GL50803_5809-t26_1-p1 ; Align 100915 1 2469 utg11_pilon exonerate:protein2genome:local gene 101199 101591 676 + . gene_id 0 ; sequence GL50803_5810-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 101199 101591 . + . utg11_pilon exonerate:protein2genome:local exon 101199 101591 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 101199 101591 676 + . alignment_id 0 ; Query GL50803_5810-t26_1-p1 ; Align 101199 1 393 utg11_pilon exonerate:protein2genome:local gene 101607 102839 1855 + . gene_id 0 ; sequence GL50803_5811-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 101607 102839 . + . utg11_pilon exonerate:protein2genome:local exon 101607 102839 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 101607 102839 1855 + . alignment_id 0 ; Query GL50803_5811-t26_1-p1 ; Align 101607 6 1233 utg47_pilon exonerate:protein2genome:local gene 1412666 1958210 1026 - . gene_id 0 ; sequence GL50803_5812-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1957633 1958210 . - . utg47_pilon exonerate:protein2genome:local exon 1957633 1958210 . - . insertions 9 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 1957631 1957632 . - . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1781101 1957632 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1781101 1781102 . - . intron_id 0 ; splice_site "AC" utg47_pilon exonerate:protein2genome:local cds 1781017 1781100 . - . utg47_pilon exonerate:protein2genome:local exon 1781017 1781100 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1781015 1781016 . - . intron_id 2 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 1695810 1781016 . - . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1695810 1695811 . - . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1695804 1695809 . - . utg47_pilon exonerate:protein2genome:local exon 1695804 1695809 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1695802 1695803 . - . intron_id 3 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1546406 1695803 . - . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 1546406 1546407 . - . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1546213 1546405 . - . utg47_pilon exonerate:protein2genome:local exon 1546213 1546405 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1546211 1546212 . - . intron_id 4 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 1413703 1546212 . - . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 1413703 1413704 . - . intron_id 3 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1413526 1413702 . - . utg47_pilon exonerate:protein2genome:local exon 1413526 1413702 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1413524 1413525 . - . intron_id 5 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1412807 1413525 . - . intron_id 5 utg47_pilon exonerate:protein2genome:local splice3 1412807 1412808 . - . intron_id 4 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1412666 1412806 . - . utg47_pilon exonerate:protein2genome:local exon 1412666 1412806 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1412666 1958210 1026 - . alignment_id 0 ; Query GL50803_5812-t26_1-p1 ; Align 1958211 47 102 ; Align 1958106 81 138 ; Align 1957965 127 138 ; Align 1957827 175 153 ; Align 1957671 226 36 ; Align 1781100 239 81 ; Align 1695809 267 3 ; Align 1546405 269 192 ; Align 1413703 333 177 ; Align 1412807 392 141 utg11_pilon exonerate:protein2genome:local gene 111306 111413 114 + . gene_id 0 ; sequence GL50803_5813-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 111306 111413 . + . utg11_pilon exonerate:protein2genome:local exon 111306 111413 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 111306 111413 114 + . alignment_id 0 ; Query GL50803_5813-t26_1-p1 ; Align 111306 22 108 utg265_pilon exonerate:protein2genome:local gene 533444 533584 109 - . gene_id 0 ; sequence GL50803_5819-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 533444 533584 . - . utg265_pilon exonerate:protein2genome:local exon 533444 533584 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 533444 533584 109 - . alignment_id 0 ; Query GL50803_5819-t26_1-p1 ; Align 533585 1 141 utg265_pilon exonerate:protein2genome:local gene 531920 533368 2250 + . gene_id 0 ; sequence GL50803_5820-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 531920 533368 . + . utg265_pilon exonerate:protein2genome:local exon 531920 533368 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 531920 533368 2250 + . alignment_id 0 ; Query GL50803_5820-t26_1-p1 ; Align 531920 14 1449 utg265_pilon exonerate:protein2genome:local gene 529502 531822 3019 - . gene_id 0 ; sequence GL50803_5821-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 529502 531822 . - . utg265_pilon exonerate:protein2genome:local exon 529502 531822 . - . insertions 0 ; deletions 1 ; frameshifts 5 utg265_pilon exonerate:protein2genome:local similarity 529502 531822 3019 - . alignment_id 0 ; Query GL50803_5821-t26_1-p1 ; Align 531823 29 624 ; Align 531199 238 774 ; Align 530420 496 918 utg265_pilon exonerate:protein2genome:local gene 527469 529473 2154 - . gene_id 0 ; sequence GL50803_5822-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 527469 529473 . - . utg265_pilon exonerate:protein2genome:local exon 527469 529473 . - . insertions 24 ; deletions 8 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 527469 529473 2154 - . alignment_id 0 ; Query GL50803_5822-t26_1-p1 ; Align 529474 1 642 ; Align 528823 215 114 ; Align 528697 253 36 ; Align 528661 266 129 ; Align 528532 311 186 ; Align 528346 374 33 ; Align 528310 385 174 ; Align 528136 447 216 ; Align 527919 519 450 utg265_pilon exonerate:protein2genome:local gene 526597 527379 1108 + . gene_id 0 ; sequence GL50803_5823-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 526597 527379 . + . utg265_pilon exonerate:protein2genome:local exon 526597 527379 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 526597 527379 1108 + . alignment_id 0 ; Query GL50803_5823-t26_1-p1 ; Align 526597 1 783 utg731_pilon exonerate:protein2genome:local gene 1082662 1083516 1255 + . gene_id 0 ; sequence GL50803_5842-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1082662 1083516 . + . utg731_pilon exonerate:protein2genome:local exon 1082662 1083516 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1082662 1083516 1255 + . alignment_id 0 ; Query GL50803_5842-t26_1-p1 ; Align 1082662 1 855 utg731_pilon exonerate:protein2genome:local gene 1086253 1086768 854 + . gene_id 0 ; sequence GL50803_5845-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1086253 1086768 . + . utg731_pilon exonerate:protein2genome:local exon 1086253 1086768 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1086253 1086768 854 + . alignment_id 0 ; Query GL50803_5845-t26_1-p1 ; Align 1086253 1 516 utg11_pilon exonerate:protein2genome:local gene 1154501 1155583 1339 - . gene_id 0 ; sequence GL50803_5857-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1154501 1155583 . - . utg11_pilon exonerate:protein2genome:local exon 1154501 1155583 . - . insertions 9 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1154501 1155583 1339 - . alignment_id 0 ; Query GL50803_5857-t26_1-p1 ; Align 1155584 1 135 ; Align 1155440 46 939 utg11_pilon exonerate:protein2genome:local gene 1150753 1151286 814 + . gene_id 0 ; sequence GL50803_5859-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1150753 1151286 . + . utg11_pilon exonerate:protein2genome:local exon 1150753 1151286 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1150753 1151286 814 + . alignment_id 0 ; Query GL50803_5859-t26_1-p1 ; Align 1150753 1 534 utg11_pilon exonerate:protein2genome:local gene 376023 376679 1001 + . gene_id 0 ; sequence GL50803_5866-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 376023 376679 . + . utg11_pilon exonerate:protein2genome:local exon 376023 376679 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 376023 376679 1001 + . alignment_id 0 ; Query GL50803_5866-t26_1-p1 ; Align 376023 1 657 utg11_pilon exonerate:protein2genome:local gene 374041 375966 2851 + . gene_id 0 ; sequence GL50803_5867-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 374041 375966 . + . utg11_pilon exonerate:protein2genome:local exon 374041 375966 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 374041 375966 2851 + . alignment_id 0 ; Query GL50803_5867-t26_1-p1 ; Align 374041 1 1107 ; Align 375148 371 819 utg11_pilon exonerate:protein2genome:local gene 373462 373935 560 + . gene_id 0 ; sequence GL50803_5869-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 373462 373935 . + . utg11_pilon exonerate:protein2genome:local exon 373462 373935 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 373462 373935 560 + . alignment_id 0 ; Query GL50803_5869-t26_1-p1 ; Align 373462 33 474 utg11_pilon exonerate:protein2genome:local gene 370901 372004 1784 - . gene_id 0 ; sequence GL50803_5871-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 370901 372004 . - . utg11_pilon exonerate:protein2genome:local exon 370901 372004 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 370901 372004 1784 - . alignment_id 0 ; Query GL50803_5871-t26_1-p1 ; Align 372005 1 1104 utg11_pilon exonerate:protein2genome:local gene 369648 370067 387 - . gene_id 0 ; sequence GL50803_5873-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 369648 370067 . - . utg11_pilon exonerate:protein2genome:local exon 369648 370067 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 369648 370067 387 - . alignment_id 0 ; Query GL50803_5873-t26_1-p1 ; Align 370068 1 204 ; Align 369864 70 183 ; Align 369681 132 33 utg11_pilon exonerate:protein2genome:local gene 365943 369629 4638 + . gene_id 0 ; sequence GL50803_5874-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 365943 369629 . + . utg11_pilon exonerate:protein2genome:local exon 365943 369629 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 365943 369629 4638 + . alignment_id 0 ; Query GL50803_5874-t26_1-p1 ; Align 365943 1 987 ; Align 366930 332 2700 utg18_pilon exonerate:protein2genome:local gene 279871 282396 3124 + . gene_id 0 ; sequence GL50803_5879-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 279871 282396 . + . utg18_pilon exonerate:protein2genome:local exon 279871 282396 . + . insertions 18 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 279871 282396 3124 + . alignment_id 0 ; Query GL50803_5879-t26_1-p1 ; Align 279871 438 582 ; Align 280459 632 51 ; Align 280522 649 96 ; Align 280618 682 1779 utg18_pilon exonerate:protein2genome:local gene 278236 278385 137 - . gene_id 0 ; sequence GL50803_5880-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 278236 278385 . - . utg18_pilon exonerate:protein2genome:local exon 278236 278385 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 278236 278385 137 - . alignment_id 0 ; Query GL50803_5880-t26_1-p1 ; Align 278386 2 150 utg18_pilon exonerate:protein2genome:local gene 274819 278352 4135 + . gene_id 0 ; sequence GL50803_5881-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 274819 278352 . + . utg18_pilon exonerate:protein2genome:local exon 274819 278352 . + . insertions 3 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 274819 278352 4135 + . alignment_id 0 ; Query GL50803_5881-t26_1-p1 ; Align 274819 1 879 ; Align 275698 295 225 ; Align 275923 371 1812 ; Align 277738 975 615 utg64_pilon exonerate:protein2genome:local gene 677686 679374 2665 - . gene_id 0 ; sequence GL50803_5883-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 677686 679374 . - . utg64_pilon exonerate:protein2genome:local exon 677686 679374 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 677686 679374 2665 - . alignment_id 0 ; Query GL50803_5883-t26_1-p1 ; Align 679375 1 537 ; Align 678835 180 1149 utg64_pilon exonerate:protein2genome:local gene 671986 672282 413 - . gene_id 0 ; sequence GL50803_5890-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 671986 672282 . - . utg64_pilon exonerate:protein2genome:local exon 671986 672282 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 671986 672282 413 - . alignment_id 0 ; Query GL50803_5890-t26_1-p1 ; Align 672283 7 297 utg64_pilon exonerate:protein2genome:local gene 670601 671773 1871 + . gene_id 0 ; sequence GL50803_5892-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 670601 671773 . + . utg64_pilon exonerate:protein2genome:local exon 670601 671773 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 670601 671773 1871 + . alignment_id 0 ; Query GL50803_5892-t26_1-p1 ; Align 670601 1 1173 utg64_pilon exonerate:protein2genome:local gene 669871 670017 142 + . gene_id 0 ; sequence GL50803_5894-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 669871 670017 . + . utg64_pilon exonerate:protein2genome:local exon 669871 670017 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 669871 670017 142 + . alignment_id 0 ; Query GL50803_5894-t26_1-p1 ; Align 669871 7 147 utg64_pilon exonerate:protein2genome:local gene 253202 254071 1051 - . gene_id 0 ; sequence GL50803_5908-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 253202 254071 . - . utg64_pilon exonerate:protein2genome:local exon 253202 254071 . - . insertions 3 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 253202 254071 1051 - . alignment_id 0 ; Query GL50803_5908-t26_1-p1 ; Align 254072 1 579 ; Align 253493 195 93 ; Align 253400 227 27 ; Align 253370 236 168 utg64_pilon exonerate:protein2genome:local gene 254518 256299 2319 - . gene_id 0 ; sequence GL50803_5910-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 254518 256299 . - . utg64_pilon exonerate:protein2genome:local exon 254518 256299 . - . insertions 3 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 254518 256299 2319 - . alignment_id 0 ; Query GL50803_5910-t26_1-p1 ; Align 256300 1 1311 ; Align 254989 439 330 ; Align 254659 550 90 ; Align 254566 580 48 utg64_pilon exonerate:protein2genome:local gene 256357 256638 391 - . gene_id 0 ; sequence GL50803_5911-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 256357 256638 . - . utg64_pilon exonerate:protein2genome:local exon 256357 256638 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 256357 256638 391 - . alignment_id 0 ; Query GL50803_5911-t26_1-p1 ; Align 256639 1 282 utg64_pilon exonerate:protein2genome:local gene 258679 260241 2243 + . gene_id 0 ; sequence GL50803_5919-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 258679 260241 . + . utg64_pilon exonerate:protein2genome:local exon 258679 260241 . + . insertions 0 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 258679 260241 2243 + . alignment_id 0 ; Query GL50803_5919-t26_1-p1 ; Align 258679 1 222 ; Align 258901 79 1341 utg64_pilon exonerate:protein2genome:local gene 261039 262100 1107 - . gene_id 0 ; sequence GL50803_5921-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 261426 262100 . - . utg64_pilon exonerate:protein2genome:local exon 261426 262100 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 261424 261425 . - . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 261315 261425 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 261315 261316 . - . intron_id 0 ; splice_site "AA" utg64_pilon exonerate:protein2genome:local cds 261039 261314 . - . utg64_pilon exonerate:protein2genome:local exon 261039 261314 . - . insertions 0 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 261039 262100 1107 - . alignment_id 0 ; Query GL50803_5921-t26_1-p1 ; Align 262101 1 675 ; Align 261315 226 21 ; Align 261294 234 114 ; Align 261180 275 141 utg64_pilon exonerate:protein2genome:local gene 606195 608834 3379 + . gene_id 0 ; sequence GL50803_5925-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 606195 608834 . + . utg64_pilon exonerate:protein2genome:local exon 606195 608834 . + . insertions 6 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 606195 608834 3379 + . alignment_id 0 ; Query GL50803_5925-t26_1-p1 ; Align 606195 1 1227 ; Align 607422 413 138 ; Align 607566 459 1269 utg64_pilon exonerate:protein2genome:local gene 608809 611148 3181 - . gene_id 0 ; sequence GL50803_5926-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 610347 611148 . - . utg64_pilon exonerate:protein2genome:local exon 610347 611148 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 610345 610346 . - . intron_id 1 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local intron 610317 610346 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 610317 610318 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 608809 610316 . - . utg64_pilon exonerate:protein2genome:local exon 608809 610316 . - . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 608809 611148 3181 - . alignment_id 0 ; Query GL50803_5926-t26_1-p1 ; Align 611149 1 801 ; Align 610315 269 6 ; Align 610309 273 1500 utg64_pilon exonerate:protein2genome:local gene 611206 612099 1351 + . gene_id 0 ; sequence GL50803_5927-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 611206 612099 . + . utg64_pilon exonerate:protein2genome:local exon 611206 612099 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 611206 612099 1351 + . alignment_id 0 ; Query GL50803_5927-t26_1-p1 ; Align 611206 38 894 utg64_pilon exonerate:protein2genome:local gene 611989 612108 131 - . gene_id 0 ; sequence GL50803_5928-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 611989 612108 . - . utg64_pilon exonerate:protein2genome:local exon 611989 612108 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 611989 612108 131 - . alignment_id 0 ; Query GL50803_5928-t26_1-p1 ; Align 612109 4 120 utg64_pilon exonerate:protein2genome:local gene 612104 612472 604 - . gene_id 0 ; sequence GL50803_5929-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 612104 612472 . - . utg64_pilon exonerate:protein2genome:local exon 612104 612472 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 612104 612472 604 - . alignment_id 0 ; Query GL50803_5929-t26_1-p1 ; Align 612473 1 369 utg64_pilon exonerate:protein2genome:local gene 1000111 1000341 292 - . gene_id 0 ; sequence GL50803_5934-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1000111 1000341 . - . utg64_pilon exonerate:protein2genome:local exon 1000111 1000341 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1000111 1000341 292 - . alignment_id 0 ; Query GL50803_5934-t26_1-p1 ; Align 1000342 1 231 utg64_pilon exonerate:protein2genome:local gene 1000750 1000893 167 - . gene_id 0 ; sequence GL50803_5936-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1000750 1000893 . - . utg64_pilon exonerate:protein2genome:local exon 1000750 1000893 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1000750 1000893 167 - . alignment_id 0 ; Query GL50803_5936-t26_1-p1 ; Align 1000894 1 144 utg64_pilon exonerate:protein2genome:local gene 1001117 1001914 720 + . gene_id 0 ; sequence GL50803_5938-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1001117 1001914 . + . utg64_pilon exonerate:protein2genome:local exon 1001117 1001914 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1001117 1001914 720 + . alignment_id 0 ; Query GL50803_5938-t26_1-p1 ; Align 1001117 1 570 ; Align 1001690 191 225 utg64_pilon exonerate:protein2genome:local gene 1001930 1002796 1334 + . gene_id 0 ; sequence GL50803_5939-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1001930 1002796 . + . utg64_pilon exonerate:protein2genome:local exon 1001930 1002796 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1001930 1002796 1334 + . alignment_id 0 ; Query GL50803_5939-t26_1-p1 ; Align 1001930 1 867 utg64_pilon exonerate:protein2genome:local gene 1004142 1005443 1597 + . gene_id 0 ; sequence GL50803_5942-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1004142 1005443 . + . utg64_pilon exonerate:protein2genome:local exon 1004142 1005443 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 1004142 1005443 1597 + . alignment_id 0 ; Query GL50803_5942-t26_1-p1 ; Align 1004142 8 1176 ; Align 1005318 401 126 utg64_pilon exonerate:protein2genome:local gene 1011411 1011780 602 - . gene_id 0 ; sequence GL50803_5947-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1011411 1011780 . - . utg64_pilon exonerate:protein2genome:local exon 1011411 1011780 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 1011411 1011780 602 - . alignment_id 0 ; Query GL50803_5947-t26_1-p1 ; Align 1011781 1 201 ; Align 1011579 68 168 utg64_pilon exonerate:protein2genome:local gene 1011931 1012497 844 + . gene_id 0 ; sequence GL50803_5949-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1011931 1012497 . + . utg64_pilon exonerate:protein2genome:local exon 1011931 1012497 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1011931 1012497 844 + . alignment_id 0 ; Query GL50803_5949-t26_1-p1 ; Align 1011931 1 567 utg64_pilon exonerate:protein2genome:local gene 1012497 1012769 397 + . gene_id 0 ; sequence GL50803_5950-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1012497 1012769 . + . utg64_pilon exonerate:protein2genome:local exon 1012497 1012769 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1012497 1012769 397 + . alignment_id 0 ; Query GL50803_5950-t26_1-p1 ; Align 1012497 1 273 utg47_pilon exonerate:protein2genome:local gene 1629965 1630084 144 + . gene_id 0 ; sequence GL50803_5954-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1629965 1630084 . + . utg47_pilon exonerate:protein2genome:local exon 1629965 1630084 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1629965 1630084 144 + . alignment_id 0 ; Query GL50803_5954-t26_1-p1 ; Align 1629965 38 120 utg47_pilon exonerate:protein2genome:local gene 2191847 2195347 3703 - . gene_id 0 ; sequence GL50803_5981-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2191847 2195347 . - . utg47_pilon exonerate:protein2genome:local exon 2191847 2195347 . - . insertions 3 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 2191847 2195347 3703 - . alignment_id 0 ; Query GL50803_5981-t26_1-p1 ; Align 2195348 1 1071 ; Align 2194274 358 513 ; Align 2193761 530 1593 ; Align 2192168 1062 321 utg731_pilon exonerate:protein2genome:local gene 395284 397395 2435 + . gene_id 0 ; sequence GL50803_5987-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 395284 397395 . + . utg731_pilon exonerate:protein2genome:local exon 395284 397395 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 395284 397395 2435 + . alignment_id 0 ; Query GL50803_5987-t26_1-p1 ; Align 395284 1 693 ; Align 395977 233 1041 ; Align 397018 581 378 utg731_pilon exonerate:protein2genome:local gene 397424 398116 878 + . gene_id 0 ; sequence GL50803_5988-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 397424 398116 . + . utg731_pilon exonerate:protein2genome:local exon 397424 398116 . + . insertions 0 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 397424 398116 878 + . alignment_id 0 ; Query GL50803_5988-t26_1-p1 ; Align 397424 1 147 ; Align 397571 55 546 utg64_pilon exonerate:protein2genome:local gene 510939 512506 2079 + . gene_id 0 ; sequence GL50803_5999-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 510939 512506 . + . utg64_pilon exonerate:protein2genome:local exon 510939 512506 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 510939 512506 2079 + . alignment_id 0 ; Query GL50803_5999-t26_1-p1 ; Align 510939 1 1314 ; Align 512255 440 252 utg64_pilon exonerate:protein2genome:local gene 512537 514383 2666 + . gene_id 0 ; sequence GL50803_6000-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 512537 514383 . + . utg64_pilon exonerate:protein2genome:local exon 512537 514383 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 512537 514383 2666 + . alignment_id 0 ; Query GL50803_6000-t26_1-p1 ; Align 512537 1 114 ; Align 512653 40 1731 utg349_pilon exonerate:protein2genome:local gene 1556521 1559550 3789 + . gene_id 0 ; sequence GL50803_6007-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1556521 1559550 . + . utg349_pilon exonerate:protein2genome:local exon 1556521 1559550 . + . insertions 12 ; deletions 9 utg349_pilon exonerate:protein2genome:local similarity 1556521 1559550 3789 + . alignment_id 0 ; Query GL50803_6007-t26_1-p1 ; Align 1556521 1 873 ; Align 1557400 292 51 ; Align 1557451 312 387 ; Align 1557838 443 177 ; Align 1558015 503 267 ; Align 1558282 595 123 ; Align 1558411 636 1140 utg349_pilon exonerate:protein2genome:local gene 1552052 1553062 1019 - . gene_id 0 ; sequence GL50803_6010-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1552052 1553062 . - . utg349_pilon exonerate:protein2genome:local exon 1552052 1553062 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1552052 1553062 1019 - . alignment_id 0 ; Query GL50803_6010-t26_1-p1 ; Align 1553063 454 189 ; Align 1552874 518 822 utg11_pilon exonerate:protein2genome:local gene 1110738 1111706 1162 - . gene_id 0 ; sequence GL50803_6015-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1110738 1111706 . - . utg11_pilon exonerate:protein2genome:local exon 1110738 1111706 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1110738 1111706 1162 - . alignment_id 0 ; Query GL50803_6015-t26_1-p1 ; Align 1111707 1 969 utg11_pilon exonerate:protein2genome:local gene 1119961 1120338 622 + . gene_id 0 ; sequence GL50803_6022-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1119961 1120338 . + . utg11_pilon exonerate:protein2genome:local exon 1119961 1120338 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1119961 1120338 622 + . alignment_id 0 ; Query GL50803_6022-t26_1-p1 ; Align 1119961 1 378 utg11_pilon exonerate:protein2genome:local gene 1121201 1121728 842 - . gene_id 0 ; sequence GL50803_6026-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1121201 1121728 . - . utg11_pilon exonerate:protein2genome:local exon 1121201 1121728 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1121201 1121728 842 - . alignment_id 0 ; Query GL50803_6026-t26_1-p1 ; Align 1121729 1 528 utg308_pilon exonerate:protein2genome:local gene 544926 545534 725 - . gene_id 0 ; sequence GL50803_6035-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 544926 545534 . - . utg308_pilon exonerate:protein2genome:local exon 544926 545534 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 544926 545534 725 - . alignment_id 0 ; Query GL50803_6035-t26_1-p1 ; Align 545535 2 609 utg308_pilon exonerate:protein2genome:local gene 546692 547345 827 + . gene_id 0 ; sequence GL50803_6038-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 546692 547345 . + . utg308_pilon exonerate:protein2genome:local exon 546692 547345 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 546692 547345 827 + . alignment_id 0 ; Query GL50803_6038-t26_1-p1 ; Align 546692 1 654 utg265_pilon exonerate:protein2genome:local gene 42715 43416 1044 - . gene_id 0 ; sequence GL50803_6048-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 42715 43416 . - . utg265_pilon exonerate:protein2genome:local exon 42715 43416 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 42715 43416 1044 - . alignment_id 0 ; Query GL50803_6048-t26_1-p1 ; Align 43417 211 702 utg731_pilon exonerate:protein2genome:local gene 615770 616321 867 - . gene_id 0 ; sequence GL50803_6054-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 615770 616321 . - . utg731_pilon exonerate:protein2genome:local exon 615770 616321 . - . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 615770 616321 867 - . alignment_id 0 ; Query GL50803_6054-t26_1-p1 ; Align 616322 1 516 ; Align 615800 173 30 utg731_pilon exonerate:protein2genome:local gene 616397 617200 1319 + . gene_id 0 ; sequence GL50803_6055-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 616397 617200 . + . utg731_pilon exonerate:protein2genome:local exon 616397 617200 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 616397 617200 1319 + . alignment_id 0 ; Query GL50803_6055-t26_1-p1 ; Align 616397 1 804 utg731_pilon exonerate:protein2genome:local gene 617214 618233 1309 - . gene_id 0 ; sequence GL50803_6056-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 617214 618233 . - . utg731_pilon exonerate:protein2genome:local exon 617214 618233 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 617214 618233 1309 - . alignment_id 0 ; Query GL50803_6056-t26_1-p1 ; Align 618234 1 855 ; Align 617379 287 165 utg731_pilon exonerate:protein2genome:local gene 625190 625549 210 + . gene_id 0 ; sequence GL50803_6060-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 625190 625549 . + . utg731_pilon exonerate:protein2genome:local exon 625190 625549 . + . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 625190 625549 210 + . alignment_id 0 ; Query GL50803_6060-t26_1-p1 ; Align 625190 1 216 ; Align 625406 75 15 ; Align 625421 81 129 utg349_pilon exonerate:protein2genome:local gene 795051 795863 1227 + . gene_id 0 ; sequence GL50803_6072-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 795051 795863 . + . utg349_pilon exonerate:protein2genome:local exon 795051 795863 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 795051 795863 1227 + . alignment_id 0 ; Query GL50803_6072-t26_1-p1 ; Align 795051 2 813 utg308_pilon exonerate:protein2genome:local gene 320231 323788 4780 + . gene_id 0 ; sequence GL50803_6081-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 320231 323788 . + . utg308_pilon exonerate:protein2genome:local exon 320231 323788 . + . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 320231 323788 4780 + . alignment_id 0 ; Query GL50803_6081-t26_1-p1 ; Align 320231 1 1128 ; Align 321359 378 1392 ; Align 322751 843 1038 utg308_pilon exonerate:protein2genome:local gene 323824 331797 10319 - . gene_id 0 ; sequence GL50803_6082-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 323824 331797 . - . utg308_pilon exonerate:protein2genome:local exon 323824 331797 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 323824 331797 10319 - . alignment_id 0 ; Query GL50803_6082-t26_1-p1 ; Align 331798 1 7974 utg308_pilon exonerate:protein2genome:local gene 332641 333327 998 + . gene_id 0 ; sequence GL50803_6084-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 332641 333327 . + . utg308_pilon exonerate:protein2genome:local exon 332641 333327 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 332641 333327 998 + . alignment_id 0 ; Query GL50803_6084-t26_1-p1 ; Align 332641 2 687 utg64_pilon exonerate:protein2genome:local gene 550353 550583 227 - . gene_id 0 ; sequence GL50803_6101-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 550353 550583 . - . utg64_pilon exonerate:protein2genome:local exon 550353 550583 . - . insertions 6 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 550353 550583 227 - . alignment_id 0 ; Query GL50803_6101-t26_1-p1 ; Align 550584 1 159 ; Align 550419 54 66 utg731_pilon exonerate:protein2genome:local gene 1524303 1524992 544 - . gene_id 0 ; sequence GL50803_6120-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1524303 1524992 . - . utg731_pilon exonerate:protein2genome:local exon 1524303 1524992 . - . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1524303 1524992 544 - . alignment_id 0 ; Query GL50803_6120-t26_1-p1 ; Align 1524993 1 210 ; Align 1524783 74 480 utg212_pilon exonerate:protein2genome:local gene 26810 27208 523 - . gene_id 0 ; sequence GL50803_6131-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 26810 27208 . - . utg212_pilon exonerate:protein2genome:local exon 26810 27208 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 26810 27208 523 - . alignment_id 0 ; Query GL50803_6131-t26_1-p1 ; Align 27209 2 399 utg212_pilon exonerate:protein2genome:local gene 26450 28085 2469 + . gene_id 0 ; sequence GL50803_6132-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 26450 28085 . + . utg212_pilon exonerate:protein2genome:local exon 26450 28085 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 26450 28085 2469 + . alignment_id 0 ; Query GL50803_6132-t26_1-p1 ; Align 26450 1 144 ; Align 26595 49 1491 utg212_pilon exonerate:protein2genome:local gene 25981 26397 645 + . gene_id 0 ; sequence GL50803_6133-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 25981 26397 . + . utg212_pilon exonerate:protein2genome:local exon 25981 26397 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 25981 26397 645 + . alignment_id 0 ; Query GL50803_6133-t26_1-p1 ; Align 25981 14 417 utg212_pilon exonerate:protein2genome:local gene 25028 25438 672 + . gene_id 0 ; sequence GL50803_6135-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 25028 25438 . + . utg212_pilon exonerate:protein2genome:local exon 25028 25438 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 25028 25438 672 + . alignment_id 0 ; Query GL50803_6135-t26_1-p1 ; Align 25028 1 411 utg212_pilon exonerate:protein2genome:local gene 22358 22840 652 + . gene_id 0 ; sequence GL50803_6138-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 22358 22840 . + . utg212_pilon exonerate:protein2genome:local exon 22358 22840 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 22358 22840 652 + . alignment_id 0 ; Query GL50803_6138-t26_1-p1 ; Align 22358 1 483 utg212_pilon exonerate:protein2genome:local gene 20651 22345 2349 - . gene_id 0 ; sequence GL50803_6139-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 20651 22345 . - . utg212_pilon exonerate:protein2genome:local exon 20651 22345 . - . insertions 12 ; deletions 5 utg212_pilon exonerate:protein2genome:local similarity 20651 22345 2349 - . alignment_id 0 ; Query GL50803_6139-t26_1-p1 ; Align 22346 1 357 ; Align 21977 120 1227 ; Align 20750 534 99 utg212_pilon exonerate:protein2genome:local gene 18386 20296 2026 - . gene_id 0 ; sequence GL50803_6140-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 18386 20296 . - . utg212_pilon exonerate:protein2genome:local exon 18386 20296 . - . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 18386 20296 2026 - . alignment_id 0 ; Query GL50803_6140-t26_1-p1 ; Align 20297 1 438 ; Align 19856 147 1470 utg47_pilon exonerate:protein2genome:local gene 2045237 2045701 686 + . gene_id 0 ; sequence GL50803_6147-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2045237 2045701 . + . utg47_pilon exonerate:protein2genome:local exon 2045237 2045701 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2045237 2045701 686 + . alignment_id 0 ; Query GL50803_6147-t26_1-p1 ; Align 2045237 1 465 utg47_pilon exonerate:protein2genome:local gene 2046168 2048435 3507 + . gene_id 0 ; sequence GL50803_6148-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2046168 2048435 . + . utg47_pilon exonerate:protein2genome:local exon 2046168 2048435 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2046168 2048435 3507 + . alignment_id 0 ; Query GL50803_6148-t26_1-p1 ; Align 2046168 5 2268 utg11_pilon exonerate:protein2genome:local gene 1532376 1532807 544 - . gene_id 0 ; sequence GL50803_6153-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1532376 1532807 . - . utg11_pilon exonerate:protein2genome:local exon 1532376 1532807 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1532376 1532807 544 - . alignment_id 0 ; Query GL50803_6153-t26_1-p1 ; Align 1532808 1 432 utg212_pilon exonerate:protein2genome:local gene 89041 89958 1280 + . gene_id 0 ; sequence GL50803_6170-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 89041 89958 . + . utg212_pilon exonerate:protein2genome:local exon 89041 89958 . + . insertions 12 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 89041 89958 1280 + . alignment_id 0 ; Query GL50803_6170-t26_1-p1 ; Align 89041 1 819 ; Align 89872 274 87 utg212_pilon exonerate:protein2genome:local gene 88452 88908 711 - . gene_id 0 ; sequence GL50803_6171-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 88452 88908 . - . utg212_pilon exonerate:protein2genome:local exon 88452 88908 . - . insertions 0 ; deletions 0 ; frameshifts 4 utg212_pilon exonerate:protein2genome:local similarity 88452 88908 711 - . alignment_id 0 ; Query GL50803_6171-t26_1-p1 ; Align 88909 1 150 ; Align 88755 51 303 utg212_pilon exonerate:protein2genome:local gene 85617 86549 1159 - . gene_id 0 ; sequence GL50803_6174-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 85617 86549 . - . utg212_pilon exonerate:protein2genome:local exon 85617 86549 . - . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 85617 86549 1159 - . alignment_id 0 ; Query GL50803_6174-t26_1-p1 ; Align 86550 1 636 ; Align 85911 213 294 utg212_pilon exonerate:protein2genome:local gene 84621 85453 1077 - . gene_id 0 ; sequence GL50803_6175-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 84621 85453 . - . utg212_pilon exonerate:protein2genome:local exon 84621 85453 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 84621 85453 1077 - . alignment_id 0 ; Query GL50803_6175-t26_1-p1 ; Align 85454 1 630 ; Align 84822 211 201 utg212_pilon exonerate:protein2genome:local gene 82137 84534 3482 - . gene_id 0 ; sequence GL50803_6176-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 82137 84534 . - . utg212_pilon exonerate:protein2genome:local exon 82137 84534 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 82137 84534 3482 - . alignment_id 0 ; Query GL50803_6176-t26_1-p1 ; Align 84535 1 1554 ; Align 82980 519 843 utg212_pilon exonerate:protein2genome:local gene 81527 82066 908 + . gene_id 0 ; sequence GL50803_6177-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 81527 82066 . + . utg212_pilon exonerate:protein2genome:local exon 81527 82066 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 81527 82066 908 + . alignment_id 0 ; Query GL50803_6177-t26_1-p1 ; Align 81527 52 540 utg212_pilon exonerate:protein2genome:local gene 81167 81370 149 - . gene_id 0 ; sequence GL50803_6178-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 81167 81370 . - . utg212_pilon exonerate:protein2genome:local exon 81167 81370 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 81167 81370 149 - . alignment_id 0 ; Query GL50803_6178-t26_1-p1 ; Align 81371 8 204 utg212_pilon exonerate:protein2genome:local gene 81107 81340 346 + . gene_id 0 ; sequence GL50803_6179-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 81107 81340 . + . utg212_pilon exonerate:protein2genome:local exon 81107 81340 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 81107 81340 346 + . alignment_id 0 ; Query GL50803_6179-t26_1-p1 ; Align 81107 1 234 utg731_pilon exonerate:protein2genome:local gene 1504022 1505086 1671 - . gene_id 0 ; sequence GL50803_6184-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1504022 1505086 . - . utg731_pilon exonerate:protein2genome:local exon 1504022 1505086 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1504022 1505086 1671 - . alignment_id 0 ; Query GL50803_6184-t26_1-p1 ; Align 1505087 1 1065 utg731_pilon exonerate:protein2genome:local gene 1503338 1503976 1066 + . gene_id 0 ; sequence GL50803_6185-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1503338 1503976 . + . utg731_pilon exonerate:protein2genome:local exon 1503338 1503976 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1503338 1503976 1066 + . alignment_id 0 ; Query GL50803_6185-t26_1-p1 ; Align 1503338 1 639 utg731_pilon exonerate:protein2genome:local gene 1502033 1502239 201 + . gene_id 0 ; sequence GL50803_6188-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1502033 1502239 . + . utg731_pilon exonerate:protein2genome:local exon 1502033 1502239 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1502033 1502239 201 + . alignment_id 0 ; Query GL50803_6188-t26_1-p1 ; Align 1502033 1 207 utg731_pilon exonerate:protein2genome:local gene 1594544 1594825 344 + . gene_id 0 ; sequence GL50803_6197-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1594544 1594825 . + . utg731_pilon exonerate:protein2genome:local exon 1594544 1594825 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1594544 1594825 344 + . alignment_id 0 ; Query GL50803_6197-t26_1-p1 ; Align 1594544 1 282 utg731_pilon exonerate:protein2genome:local gene 1596206 1599274 3894 - . gene_id 0 ; sequence GL50803_6199-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1596206 1599274 . - . utg731_pilon exonerate:protein2genome:local exon 1596206 1599274 . - . insertions 0 ; deletions 6 utg731_pilon exonerate:protein2genome:local similarity 1596206 1599274 3894 - . alignment_id 0 ; Query GL50803_6199-t26_1-p1 ; Align 1599275 679 861 ; Align 1598414 969 147 ; Align 1598267 1021 2061 utg265_pilon exonerate:protein2genome:local gene 8183 10420 3224 - . gene_id 0 ; sequence GL50803_6211-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 8183 10420 . - . utg265_pilon exonerate:protein2genome:local exon 8183 10420 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 8183 10420 3224 - . alignment_id 0 ; Query GL50803_6211-t26_1-p1 ; Align 10421 1 2238 utg212_pilon exonerate:protein2genome:local gene 558819 560092 1511 - . gene_id 0 ; sequence GL50803_6212-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 558819 560092 . - . utg212_pilon exonerate:protein2genome:local exon 558819 560092 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 558819 560092 1511 - . alignment_id 0 ; Query GL50803_6212-t26_1-p1 ; Align 560093 143 699 ; Align 559392 377 573 utg265_pilon exonerate:protein2genome:local gene 569385 572156 4734 + . gene_id 0 ; sequence GL50803_6226-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 569385 572156 . + . utg265_pilon exonerate:protein2genome:local exon 569385 572156 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 569385 572156 4734 + . alignment_id 0 ; Query GL50803_6226-t26_1-p1 ; Align 569385 1 2772 utg265_pilon exonerate:protein2genome:local gene 572336 573145 1268 + . gene_id 0 ; sequence GL50803_6227-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 572336 573145 . + . utg265_pilon exonerate:protein2genome:local exon 572336 573145 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 572336 573145 1268 + . alignment_id 0 ; Query GL50803_6227-t26_1-p1 ; Align 572336 1 810 utg47_pilon exonerate:protein2genome:local gene 1717933 1718385 755 + . gene_id 0 ; sequence GL50803_6242-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1717933 1718385 . + . utg47_pilon exonerate:protein2genome:local exon 1717933 1718385 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1717933 1718385 755 + . alignment_id 0 ; Query GL50803_6242-t26_1-p1 ; Align 1717933 1 453 utg47_pilon exonerate:protein2genome:local gene 1717906 1718427 666 - . gene_id 0 ; sequence GL50803_6243-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1717906 1718427 . - . utg47_pilon exonerate:protein2genome:local exon 1717906 1718427 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1717906 1718427 666 - . alignment_id 0 ; Query GL50803_6243-t26_1-p1 ; Align 1718428 8 522 utg47_pilon exonerate:protein2genome:local gene 1718445 1720640 3093 + . gene_id 0 ; sequence GL50803_6245-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1718445 1720640 . + . utg47_pilon exonerate:protein2genome:local exon 1718445 1720640 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1718445 1720640 3093 + . alignment_id 0 ; Query GL50803_6245-t26_1-p1 ; Align 1718445 3 2196 utg349_pilon exonerate:protein2genome:local gene 714772 715035 449 + . gene_id 0 ; sequence GL50803_6248-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 714772 715035 . + . utg349_pilon exonerate:protein2genome:local exon 714772 715035 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 714772 715035 449 + . alignment_id 0 ; Query GL50803_6248-t26_1-p1 ; Align 714772 1 264 utg349_pilon exonerate:protein2genome:local gene 725791 726258 682 + . gene_id 0 ; sequence GL50803_6254-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 725791 726258 . + . utg349_pilon exonerate:protein2genome:local exon 725791 726258 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 725791 726258 682 + . alignment_id 0 ; Query GL50803_6254-t26_1-p1 ; Align 725791 1 468 utg11_pilon exonerate:protein2genome:local gene 829757 830416 960 + . gene_id 0 ; sequence GL50803_6259-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 829757 830416 . + . utg11_pilon exonerate:protein2genome:local exon 829757 830416 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 829757 830416 960 + . alignment_id 0 ; Query GL50803_6259-t26_1-p1 ; Align 829757 1 660 utg11_pilon exonerate:protein2genome:local gene 825927 829142 5402 - . gene_id 0 ; sequence GL50803_6262-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 825927 829142 . - . utg11_pilon exonerate:protein2genome:local exon 825927 829142 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 825927 829142 5402 - . alignment_id 0 ; Query GL50803_6262-t26_1-p1 ; Align 829143 1 3063 ; Align 826080 1023 153 utg47_pilon exonerate:protein2genome:local gene 992581 994008 2118 - . gene_id 0 ; sequence GL50803_6283-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 992581 994008 . - . utg47_pilon exonerate:protein2genome:local exon 992581 994008 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 992581 994008 2118 - . alignment_id 0 ; Query GL50803_6283-t26_1-p1 ; Align 994009 1 1428 utg47_pilon exonerate:protein2genome:local gene 994190 995581 1656 + . gene_id 0 ; sequence GL50803_6284-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 994190 995581 . + . utg47_pilon exonerate:protein2genome:local exon 994190 995581 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 994190 995581 1656 + . alignment_id 0 ; Query GL50803_6284-t26_1-p1 ; Align 994190 1 1392 utg212_pilon exonerate:protein2genome:local gene 305600 307213 2093 + . gene_id 0 ; sequence GL50803_6288-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 305600 307213 . + . utg212_pilon exonerate:protein2genome:local exon 305600 307213 . + . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 305600 307213 2093 + . alignment_id 0 ; Query GL50803_6288-t26_1-p1 ; Align 305600 1 1155 ; Align 306758 386 456 utg212_pilon exonerate:protein2genome:local gene 305187 305585 695 + . gene_id 0 ; sequence GL50803_6289-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 305187 305585 . + . utg212_pilon exonerate:protein2genome:local exon 305187 305585 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 305187 305585 695 + . alignment_id 0 ; Query GL50803_6289-t26_1-p1 ; Align 305187 1 399 utg212_pilon exonerate:protein2genome:local gene 302448 304025 1479 + . gene_id 0 ; sequence GL50803_6291-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 302448 304025 . + . utg212_pilon exonerate:protein2genome:local exon 302448 304025 . + . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local similarity 302448 304025 1479 + . alignment_id 0 ; Query GL50803_6291-t26_1-p1 ; Align 302448 1 534 ; Align 302982 180 1044 utg212_pilon exonerate:protein2genome:local gene 301350 302156 959 - . gene_id 0 ; sequence GL50803_6292-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 301350 302156 . - . utg212_pilon exonerate:protein2genome:local exon 301350 302156 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 301350 302156 959 - . alignment_id 0 ; Query GL50803_6292-t26_1-p1 ; Align 302157 1 807 utg212_pilon exonerate:protein2genome:local gene 299629 301317 1954 - . gene_id 0 ; sequence GL50803_6294-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 299629 301317 . - . utg212_pilon exonerate:protein2genome:local exon 299629 301317 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 299629 301317 1954 - . alignment_id 0 ; Query GL50803_6294-t26_1-p1 ; Align 301318 1 1689 utg731_pilon exonerate:protein2genome:local gene 1057878 1058114 232 - . gene_id 0 ; sequence GL50803_6303-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1057878 1058114 . - . utg731_pilon exonerate:protein2genome:local exon 1057878 1058114 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1057878 1058114 232 - . alignment_id 0 ; Query GL50803_6303-t26_1-p1 ; Align 1058115 1 237 utg731_pilon exonerate:protein2genome:local gene 1057473 1058894 2429 + . gene_id 0 ; sequence GL50803_6304-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1057473 1058894 . + . utg731_pilon exonerate:protein2genome:local exon 1057473 1058894 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1057473 1058894 2429 + . alignment_id 0 ; Query GL50803_6304-t26_1-p1 ; Align 1057473 1 1422 utg731_pilon exonerate:protein2genome:local gene 1060953 1063058 2897 + . gene_id 0 ; sequence GL50803_6306-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1060953 1063058 . + . utg731_pilon exonerate:protein2genome:local exon 1060953 1063058 . + . insertions 0 ; deletions 6 utg731_pilon exonerate:protein2genome:local similarity 1060953 1063058 2897 + . alignment_id 0 ; Query GL50803_6306-t26_1-p1 ; Align 1060953 1 48 ; Align 1061001 20 33 ; Align 1061034 34 2025 utg64_pilon exonerate:protein2genome:local gene 969187 972007 3639 - . gene_id 0 ; sequence GL50803_6317-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 969187 972007 . - . utg64_pilon exonerate:protein2genome:local exon 969187 972007 . - . insertions 3 ; deletions 1 ; frameshifts 7 utg64_pilon exonerate:protein2genome:local similarity 969187 972007 3639 - . alignment_id 0 ; Query GL50803_6317-t26_1-p1 ; Align 972008 407 195 ; Align 971813 473 1014 ; Align 970797 811 126 ; Align 970666 853 543 ; Align 970120 1034 933 utg349_pilon exonerate:protein2genome:local gene 997304 998116 1172 + . gene_id 0 ; sequence GL50803_6330-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 997304 998116 . + . utg349_pilon exonerate:protein2genome:local exon 997304 998116 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 997304 998116 1172 + . alignment_id 0 ; Query GL50803_6330-t26_1-p1 ; Align 997304 1 813 utg349_pilon exonerate:protein2genome:local gene 996864 997214 494 + . gene_id 0 ; sequence GL50803_6331-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 996864 997214 . + . utg349_pilon exonerate:protein2genome:local exon 996864 997214 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 996864 997214 494 + . alignment_id 0 ; Query GL50803_6331-t26_1-p1 ; Align 996864 1 351 utg349_pilon exonerate:protein2genome:local gene 993638 995332 2353 - . gene_id 0 ; sequence GL50803_6332-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 993638 995332 . - . utg349_pilon exonerate:protein2genome:local exon 993638 995332 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 993638 995332 2353 - . alignment_id 0 ; Query GL50803_6332-t26_1-p1 ; Align 995333 508 1695 utg349_pilon exonerate:protein2genome:local gene 993263 993523 316 + . gene_id 0 ; sequence GL50803_6334-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 993263 993523 . + . utg349_pilon exonerate:protein2genome:local exon 993263 993523 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 993263 993523 316 + . alignment_id 0 ; Query GL50803_6334-t26_1-p1 ; Align 993263 1 261 utg349_pilon exonerate:protein2genome:local gene 992474 993178 984 - . gene_id 0 ; sequence GL50803_6335-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 992474 993178 . - . utg349_pilon exonerate:protein2genome:local exon 992474 993178 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 992474 993178 984 - . alignment_id 0 ; Query GL50803_6335-t26_1-p1 ; Align 993179 1 705 utg349_pilon exonerate:protein2genome:local gene 991017 992450 2382 - . gene_id 0 ; sequence GL50803_6336-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 991017 992450 . - . utg349_pilon exonerate:protein2genome:local exon 991017 992450 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 991017 992450 2382 - . alignment_id 0 ; Query GL50803_6336-t26_1-p1 ; Align 992451 1 1434 utg731_pilon exonerate:protein2genome:local gene 1156676 1157107 627 - . gene_id 0 ; sequence GL50803_6340-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1156676 1157107 . - . utg731_pilon exonerate:protein2genome:local exon 1156676 1157107 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1156676 1157107 627 - . alignment_id 0 ; Query GL50803_6340-t26_1-p1 ; Align 1157108 1 432 utg731_pilon exonerate:protein2genome:local gene 1156246 1156663 363 + . gene_id 0 ; sequence GL50803_6341-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1156246 1156663 . + . utg731_pilon exonerate:protein2genome:local exon 1156246 1156663 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 1156246 1156663 363 + . alignment_id 0 ; Query GL50803_6341-t26_1-p1 ; Align 1156246 1 318 ; Align 1156565 107 99 utg731_pilon exonerate:protein2genome:local gene 1152400 1156210 5365 + . gene_id 0 ; sequence GL50803_6342-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1152400 1156210 . + . utg731_pilon exonerate:protein2genome:local exon 1152400 1156210 . + . insertions 0 ; deletions 2 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 1152400 1156210 5365 + . alignment_id 0 ; Query GL50803_6342-t26_1-p1 ; Align 1152400 1 804 ; Align 1153204 270 948 ; Align 1154152 587 1878 ; Align 1156031 1213 180 utg731_pilon exonerate:protein2genome:local gene 1147877 1148557 1011 - . gene_id 0 ; sequence GL50803_6344-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1147877 1148557 . - . utg731_pilon exonerate:protein2genome:local exon 1147877 1148557 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1147877 1148557 1011 - . alignment_id 0 ; Query GL50803_6344-t26_1-p1 ; Align 1148558 1 681 utg731_pilon exonerate:protein2genome:local gene 1146448 1147806 1350 + . gene_id 0 ; sequence GL50803_6345-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1146448 1146787 . + . utg731_pilon exonerate:protein2genome:local exon 1146448 1146787 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local splice5 1146788 1146789 . + . intron_id 1 ; splice_site "CT" utg731_pilon exonerate:protein2genome:local intron 1146788 1146826 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1146825 1146826 . + . intron_id 0 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local cds 1146827 1147806 . + . utg731_pilon exonerate:protein2genome:local exon 1146827 1147806 . + . insertions 0 ; deletions 16 utg731_pilon exonerate:protein2genome:local similarity 1146448 1147806 1350 + . alignment_id 0 ; Query GL50803_6345-t26_1-p1 ; Align 1146448 1 111 ; Align 1146559 39 228 ; Align 1146829 116 90 ; Align 1146919 150 129 ; Align 1147048 194 150 ; Align 1147198 247 54 ; Align 1147252 269 60 ; Align 1147312 293 495 utg731_pilon exonerate:protein2genome:local gene 1144966 1146294 1790 - . gene_id 0 ; sequence GL50803_6346-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1144966 1146294 . - . utg731_pilon exonerate:protein2genome:local exon 1144966 1146294 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1144966 1146294 1790 - . alignment_id 0 ; Query GL50803_6346-t26_1-p1 ; Align 1146295 1 1329 utg731_pilon exonerate:protein2genome:local gene 1272735 1273148 505 - . gene_id 0 ; sequence GL50803_6365-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1272735 1273148 . - . utg731_pilon exonerate:protein2genome:local exon 1272735 1273148 . - . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1272735 1273148 505 - . alignment_id 0 ; Query GL50803_6365-t26_1-p1 ; Align 1273149 1 138 ; Align 1273002 47 267 utg731_pilon exonerate:protein2genome:local gene 1273187 1273795 786 + . gene_id 0 ; sequence GL50803_6366-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1273187 1273795 . + . utg731_pilon exonerate:protein2genome:local exon 1273187 1273795 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1273187 1273795 786 + . alignment_id 0 ; Query GL50803_6366-t26_1-p1 ; Align 1273187 1 513 ; Align 1273703 172 93 utg731_pilon exonerate:protein2genome:local gene 1273867 1274688 1195 - . gene_id 0 ; sequence GL50803_6367-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1273867 1274688 . - . utg731_pilon exonerate:protein2genome:local exon 1273867 1274688 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1273867 1274688 1195 - . alignment_id 0 ; Query GL50803_6367-t26_1-p1 ; Align 1274689 1 360 ; Align 1274329 122 462 utg731_pilon exonerate:protein2genome:local gene 1277703 1277828 219 + . gene_id 0 ; sequence GL50803_6369-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1277703 1277828 . + . utg731_pilon exonerate:protein2genome:local exon 1277703 1277828 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1277703 1277828 219 + . alignment_id 0 ; Query GL50803_6369-t26_1-p1 ; Align 1277703 1 126 utg731_pilon exonerate:protein2genome:local gene 1284874 1286472 2235 + . gene_id 0 ; sequence GL50803_6372-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1284874 1286472 . + . utg731_pilon exonerate:protein2genome:local exon 1284874 1286472 . + . insertions 3 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1284874 1286472 2235 + . alignment_id 0 ; Query GL50803_6372-t26_1-p1 ; Align 1284874 1 1029 ; Align 1285903 345 459 ; Align 1286365 498 108 utg47_pilon exonerate:protein2genome:local gene 1001200 1002675 1572 - . gene_id 0 ; sequence GL50803_6375-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1001200 1002675 . - . utg47_pilon exonerate:protein2genome:local exon 1001200 1002675 . - . insertions 9 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1001200 1002675 1572 - . alignment_id 0 ; Query GL50803_6375-t26_1-p1 ; Align 1002676 320 348 ; Align 1002328 437 867 ; Align 1001452 726 252 utg47_pilon exonerate:protein2genome:local gene 995654 998119 3794 + . gene_id 0 ; sequence GL50803_6377-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 995654 998119 . + . utg47_pilon exonerate:protein2genome:local exon 995654 998119 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 995654 998119 3794 + . alignment_id 0 ; Query GL50803_6377-t26_1-p1 ; Align 995654 1 2466 utg11_pilon exonerate:protein2genome:local gene 58543 60840 3483 + . gene_id 0 ; sequence GL50803_6404-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 58543 60840 . + . utg11_pilon exonerate:protein2genome:local exon 58543 60840 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 58543 60840 3483 + . alignment_id 0 ; Query GL50803_6404-t26_1-p1 ; Align 58543 1 1698 ; Align 60241 568 600 utg11_pilon exonerate:protein2genome:local gene 67740 69313 2536 + . gene_id 0 ; sequence GL50803_6407-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 67740 69313 . + . utg11_pilon exonerate:protein2genome:local exon 67740 69313 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 67740 69313 2536 + . alignment_id 0 ; Query GL50803_6407-t26_1-p1 ; Align 67740 1 1224 ; Align 68966 409 348 utg11_pilon exonerate:protein2genome:local gene 69434 69805 539 - . gene_id 0 ; sequence GL50803_6408-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 69434 69805 . - . utg11_pilon exonerate:protein2genome:local exon 69434 69805 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 69434 69805 539 - . alignment_id 0 ; Query GL50803_6408-t26_1-p1 ; Align 69806 2 372 utg11_pilon exonerate:protein2genome:local gene 72754 73125 535 + . gene_id 0 ; sequence GL50803_6413-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 72754 73125 . + . utg11_pilon exonerate:protein2genome:local exon 72754 73125 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 72754 73125 535 + . alignment_id 0 ; Query GL50803_6413-t26_1-p1 ; Align 72754 27 372 utg11_pilon exonerate:protein2genome:local gene 1077295 1083537 7428 + . gene_id 0 ; sequence GL50803_6417-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1077295 1083537 . + . utg11_pilon exonerate:protein2genome:local exon 1077295 1083537 . + . insertions 3 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 1077295 1083537 7428 + . alignment_id 0 ; Query GL50803_6417-t26_1-p1 ; Align 1077295 1 2022 ; Align 1079317 677 1458 ; Align 1080775 1164 681 ; Align 1081459 1391 873 ; Align 1082332 1683 1206 utg47_pilon exonerate:protein2genome:local gene 674361 676952 3939 + . gene_id 0 ; sequence GL50803_6422-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 674361 676952 . + . utg47_pilon exonerate:protein2genome:local exon 674361 676952 . + . insertions 6 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 674361 676952 3939 + . alignment_id 0 ; Query GL50803_6422-t26_1-p1 ; Align 674361 1 93 ; Align 674457 32 27 ; Align 674487 41 1197 ; Align 675684 442 1269 utg47_pilon exonerate:protein2genome:local gene 676999 677669 775 - . gene_id 0 ; sequence GL50803_6423-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 676999 677669 . - . utg47_pilon exonerate:protein2genome:local exon 676999 677669 . - . insertions 0 ; deletions 4 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 676999 677669 775 - . alignment_id 0 ; Query GL50803_6423-t26_1-p1 ; Align 677670 1 75 ; Align 677595 30 276 ; Align 677318 122 93 ; Align 677224 153 225 utg47_pilon exonerate:protein2genome:local gene 680428 681276 1229 - . gene_id 0 ; sequence GL50803_6427-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 680428 681276 . - . utg47_pilon exonerate:protein2genome:local exon 680428 681276 . - . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 680428 681276 1229 - . alignment_id 0 ; Query GL50803_6427-t26_1-p1 ; Align 681277 234 165 ; Align 681112 291 684 utg47_pilon exonerate:protein2genome:local gene 684152 684895 1262 + . gene_id 0 ; sequence GL50803_6430-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 684152 684895 . + . utg47_pilon exonerate:protein2genome:local exon 684152 684895 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 684152 684895 1262 + . alignment_id 0 ; Query GL50803_6430-t26_1-p1 ; Align 684152 1 744 utg731_pilon exonerate:protein2genome:local gene 603286 603975 1095 + . gene_id 0 ; sequence GL50803_6436-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 603286 603975 . + . utg731_pilon exonerate:protein2genome:local exon 603286 603975 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 603286 603975 1095 + . alignment_id 0 ; Query GL50803_6436-t26_1-p1 ; Align 603286 1 690 utg731_pilon exonerate:protein2genome:local gene 598499 599047 881 - . gene_id 0 ; sequence GL50803_6439-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 598499 599047 . - . utg731_pilon exonerate:protein2genome:local exon 598499 599047 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 598499 599047 881 - . alignment_id 0 ; Query GL50803_6439-t26_1-p1 ; Align 599048 1 549 utg731_pilon exonerate:protein2genome:local gene 596773 598458 2494 + . gene_id 0 ; sequence GL50803_6441-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 596773 598458 . + . utg731_pilon exonerate:protein2genome:local exon 596773 598458 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 596773 598458 2494 + . alignment_id 0 ; Query GL50803_6441-t26_1-p1 ; Align 596773 1 1686 utg731_pilon exonerate:protein2genome:local gene 593246 593413 158 + . gene_id 0 ; sequence GL50803_6442-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 593246 593413 . + . utg731_pilon exonerate:protein2genome:local exon 593246 593413 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 593246 593413 158 + . alignment_id 0 ; Query GL50803_6442-t26_1-p1 ; Align 593246 1 168 utg11_pilon exonerate:protein2genome:local gene 1282800 1283513 1062 - . gene_id 0 ; sequence GL50803_6447-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1282800 1283513 . - . utg11_pilon exonerate:protein2genome:local exon 1282800 1283513 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1282800 1283513 1062 - . alignment_id 0 ; Query GL50803_6447-t26_1-p1 ; Align 1283514 1 714 utg11_pilon exonerate:protein2genome:local gene 1283733 1284434 1068 - . gene_id 0 ; sequence GL50803_6448-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1283733 1284434 . - . utg11_pilon exonerate:protein2genome:local exon 1283733 1284434 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1283733 1284434 1068 - . alignment_id 0 ; Query GL50803_6448-t26_1-p1 ; Align 1284435 1 702 utg11_pilon exonerate:protein2genome:local gene 1289342 1290103 1162 - . gene_id 0 ; sequence GL50803_6451-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1289342 1290103 . - . utg11_pilon exonerate:protein2genome:local exon 1289342 1290103 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1289342 1290103 1162 - . alignment_id 0 ; Query GL50803_6451-t26_1-p1 ; Align 1290104 1 762 utg11_pilon exonerate:protein2genome:local gene 1290488 1291951 1824 + . gene_id 0 ; sequence GL50803_6452-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1290488 1291951 . + . utg11_pilon exonerate:protein2genome:local exon 1290488 1291951 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1290488 1291951 1824 + . alignment_id 0 ; Query GL50803_6452-t26_1-p1 ; Align 1290488 81 39 ; Align 1290527 95 834 ; Align 1291361 374 591 utg11_pilon exonerate:protein2genome:local gene 1292767 1294083 1942 + . gene_id 0 ; sequence GL50803_6455-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1292767 1294083 . + . utg11_pilon exonerate:protein2genome:local exon 1292767 1294083 . + . insertions 0 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 1292767 1294083 1942 + . alignment_id 0 ; Query GL50803_6455-t26_1-p1 ; Align 1292767 1 573 ; Align 1293340 193 63 ; Align 1293403 218 681 utg11_pilon exonerate:protein2genome:local gene 1271745 1272146 307 - . gene_id 0 ; sequence GL50803_6458-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1271745 1272146 . - . utg11_pilon exonerate:protein2genome:local exon 1271745 1272146 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1271745 1272146 307 - . alignment_id 0 ; Query GL50803_6458-t26_1-p1 ; Align 1272147 1 402 utg11_pilon exonerate:protein2genome:local gene 1272237 1272368 128 - . gene_id 0 ; sequence GL50803_6459-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1272237 1272368 . - . utg11_pilon exonerate:protein2genome:local exon 1272237 1272368 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1272237 1272368 128 - . alignment_id 0 ; Query GL50803_6459-t26_1-p1 ; Align 1272369 4 132 utg11_pilon exonerate:protein2genome:local gene 1274341 1278123 4875 + . gene_id 0 ; sequence GL50803_6464-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1274341 1278123 . + . utg11_pilon exonerate:protein2genome:local exon 1274341 1278123 . + . insertions 6 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1274341 1278123 4875 + . alignment_id 0 ; Query GL50803_6464-t26_1-p1 ; Align 1274341 1 270 ; Align 1274611 92 1086 ; Align 1275703 454 264 ; Align 1275967 543 2157 utg731_pilon exonerate:protein2genome:local gene 378109 378750 825 + . gene_id 0 ; sequence GL50803_6469-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 378109 378750 . + . utg731_pilon exonerate:protein2genome:local exon 378109 378750 . + . insertions 6 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 378109 378750 825 + . alignment_id 0 ; Query GL50803_6469-t26_1-p1 ; Align 378109 4 258 ; Align 378367 91 102 ; Align 378475 125 276 utg731_pilon exonerate:protein2genome:local gene 375169 375549 492 + . gene_id 0 ; sequence GL50803_6471-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 375169 375549 . + . utg731_pilon exonerate:protein2genome:local exon 375169 375549 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 375169 375549 492 + . alignment_id 0 ; Query GL50803_6471-t26_1-p1 ; Align 375169 128 381 utg47_pilon exonerate:protein2genome:local gene 1476279 1477001 1087 - . gene_id 0 ; sequence GL50803_6483-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1476279 1477001 . - . utg47_pilon exonerate:protein2genome:local exon 1476279 1477001 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1476279 1477001 1087 - . alignment_id 0 ; Query GL50803_6483-t26_1-p1 ; Align 1477002 1 723 utg47_pilon exonerate:protein2genome:local gene 1480177 1481679 1732 - . gene_id 0 ; sequence GL50803_6485-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1480177 1481679 . - . utg47_pilon exonerate:protein2genome:local exon 1480177 1481679 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1480177 1481679 1732 - . alignment_id 0 ; Query GL50803_6485-t26_1-p1 ; Align 1481680 1 1503 utg47_pilon exonerate:protein2genome:local gene 1482969 1485609 3540 + . gene_id 0 ; sequence GL50803_6490-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1482969 1485609 . + . utg47_pilon exonerate:protein2genome:local exon 1482969 1485609 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1482969 1485609 3540 + . alignment_id 0 ; Query GL50803_6490-t26_1-p1 ; Align 1482969 1 1347 ; Align 1484317 451 1293 utg47_pilon exonerate:protein2genome:local gene 1486248 1488058 1907 + . gene_id 0 ; sequence GL50803_6492-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1486248 1488058 . + . utg47_pilon exonerate:protein2genome:local exon 1486248 1488058 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1486248 1488058 1907 + . alignment_id 0 ; Query GL50803_6492-t26_1-p1 ; Align 1486248 1 336 ; Align 1486585 113 114 ; Align 1486699 153 387 ; Align 1487087 282 972 utg11_pilon exonerate:protein2genome:local gene 1223364 1224362 1436 - . gene_id 0 ; sequence GL50803_6497-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1223364 1224362 . - . utg11_pilon exonerate:protein2genome:local exon 1223364 1224362 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1223364 1224362 1436 - . alignment_id 0 ; Query GL50803_6497-t26_1-p1 ; Align 1224363 1 999 utg11_pilon exonerate:protein2genome:local gene 1217923 1218138 247 + . gene_id 0 ; sequence GL50803_6501-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1217923 1218138 . + . utg11_pilon exonerate:protein2genome:local exon 1217923 1218138 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1217923 1218138 247 + . alignment_id 0 ; Query GL50803_6501-t26_1-p1 ; Align 1217923 1 216 utg349_pilon exonerate:protein2genome:local gene 1058937 1059410 636 - . gene_id 0 ; sequence GL50803_6508-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1058937 1059410 . - . utg349_pilon exonerate:protein2genome:local exon 1058937 1059410 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1058937 1059410 636 - . alignment_id 0 ; Query GL50803_6508-t26_1-p1 ; Align 1059411 1 474 utg349_pilon exonerate:protein2genome:local gene 1059699 1062323 3988 - . gene_id 0 ; sequence GL50803_6509-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1059699 1062323 . - . utg349_pilon exonerate:protein2genome:local exon 1059699 1062323 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1059699 1062323 3988 - . alignment_id 0 ; Query GL50803_6509-t26_1-p1 ; Align 1062324 10 2625 utg349_pilon exonerate:protein2genome:local gene 1072262 1073050 1042 - . gene_id 0 ; sequence GL50803_6519-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1072262 1073050 . - . utg349_pilon exonerate:protein2genome:local exon 1072262 1073050 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1072262 1073050 1042 - . alignment_id 0 ; Query GL50803_6519-t26_1-p1 ; Align 1073051 1 789 utg212_pilon exonerate:protein2genome:local gene 366936 367460 841 - . gene_id 0 ; sequence GL50803_6524-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 366936 367460 . - . utg212_pilon exonerate:protein2genome:local exon 366936 367460 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 366936 367460 841 - . alignment_id 0 ; Query GL50803_6524-t26_1-p1 ; Align 367461 1 525 utg212_pilon exonerate:protein2genome:local gene 366985 367272 412 + . gene_id 0 ; sequence GL50803_6525-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 366985 367272 . + . utg212_pilon exonerate:protein2genome:local exon 366985 367272 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 366985 367272 412 + . alignment_id 0 ; Query GL50803_6525-t26_1-p1 ; Align 366985 1 288 utg212_pilon exonerate:protein2genome:local gene 361534 363618 2562 + . gene_id 0 ; sequence GL50803_6530-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 361534 362479 . + . utg212_pilon exonerate:protein2genome:local exon 361534 362479 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 362480 362481 . + . intron_id 1 ; splice_site "GG" utg212_pilon exonerate:protein2genome:local intron 362480 362509 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 362508 362509 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 362510 363618 . + . utg212_pilon exonerate:protein2genome:local exon 362510 363618 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 361534 363618 2562 + . alignment_id 0 ; Query GL50803_6530-t26_1-p1 ; Align 361534 1 945 ; Align 362512 317 1107 utg212_pilon exonerate:protein2genome:local gene 360333 361463 1528 - . gene_id 0 ; sequence GL50803_6531-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 360333 361463 . - . utg212_pilon exonerate:protein2genome:local exon 360333 361463 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 360333 361463 1528 - . alignment_id 0 ; Query GL50803_6531-t26_1-p1 ; Align 361464 1 1131 utg212_pilon exonerate:protein2genome:local gene 350606 350914 423 - . gene_id 0 ; sequence GL50803_6535-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 350606 350914 . - . utg212_pilon exonerate:protein2genome:local exon 350606 350914 . - . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local similarity 350606 350914 423 - . alignment_id 0 ; Query GL50803_6535-t26_1-p1 ; Align 350915 1 30 ; Align 350885 12 279 utg731_pilon exonerate:protein2genome:local gene 722450 725242 3334 + . gene_id 0 ; sequence GL50803_6542-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 722450 725242 . + . utg731_pilon exonerate:protein2genome:local exon 722450 725242 . + . insertions 18 ; deletions 13 utg731_pilon exonerate:protein2genome:local similarity 722450 725242 3334 + . alignment_id 0 ; Query GL50803_6542-t26_1-p1 ; Align 722450 1 702 ; Align 723155 235 102 ; Align 723260 269 702 ; Align 723962 504 75 ; Align 724037 532 282 ; Align 724319 629 123 ; Align 724442 675 417 ; Align 724859 815 111 ; Align 724982 852 261 utg731_pilon exonerate:protein2genome:local gene 725417 726535 1626 + . gene_id 0 ; sequence GL50803_6544-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 725417 726535 . + . utg731_pilon exonerate:protein2genome:local exon 725417 726535 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 725417 726535 1626 + . alignment_id 0 ; Query GL50803_6544-t26_1-p1 ; Align 725417 7 1119 utg47_pilon exonerate:protein2genome:local gene 858997 862332 3420 - . gene_id 0 ; sequence GL50803_6556-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 858997 862332 . - . utg47_pilon exonerate:protein2genome:local exon 858997 862332 . - . insertions 0 ; deletions 4 ; frameshifts 3 utg47_pilon exonerate:protein2genome:local similarity 858997 862332 3420 - . alignment_id 0 ; Query GL50803_6556-t26_1-p1 ; Align 862333 1 111 ; Align 862220 39 456 ; Align 861764 193 576 ; Align 861188 386 579 ; Align 860608 579 1611 utg47_pilon exonerate:protein2genome:local gene 856408 857355 1235 - . gene_id 0 ; sequence GL50803_6558-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 856408 857355 . - . utg47_pilon exonerate:protein2genome:local exon 856408 857355 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 856408 857355 1235 - . alignment_id 0 ; Query GL50803_6558-t26_1-p1 ; Align 857356 1 948 utg47_pilon exonerate:protein2genome:local gene 855847 856373 668 + . gene_id 0 ; sequence GL50803_6559-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 855847 856373 . + . utg47_pilon exonerate:protein2genome:local exon 855847 856373 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 855847 856373 668 + . alignment_id 0 ; Query GL50803_6559-t26_1-p1 ; Align 855847 5 78 ; Align 855925 32 3 ; Align 855930 33 444 utg47_pilon exonerate:protein2genome:local gene 850784 851416 1015 - . gene_id 0 ; sequence GL50803_6563-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 850784 851416 . - . utg47_pilon exonerate:protein2genome:local exon 850784 851416 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 850784 851416 1015 - . alignment_id 0 ; Query GL50803_6563-t26_1-p1 ; Align 851417 1 633 utg47_pilon exonerate:protein2genome:local gene 849750 850646 1499 - . gene_id 0 ; sequence GL50803_6564-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 849750 850646 . - . utg47_pilon exonerate:protein2genome:local exon 849750 850646 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 849750 850646 1499 - . alignment_id 0 ; Query GL50803_6564-t26_1-p1 ; Align 850647 1 897 utg64_pilon exonerate:protein2genome:local gene 93151 95094 2160 - . gene_id 0 ; sequence GL50803_6579-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 93151 95094 . - . utg64_pilon exonerate:protein2genome:local exon 93151 95094 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 93151 95094 2160 - . alignment_id 0 ; Query GL50803_6579-t26_1-p1 ; Align 95095 12 1944 utg64_pilon exonerate:protein2genome:local gene 95772 96830 1317 - . gene_id 0 ; sequence GL50803_6581-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 95772 96830 . - . utg64_pilon exonerate:protein2genome:local exon 95772 96830 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 95772 96830 1317 - . alignment_id 0 ; Query GL50803_6581-t26_1-p1 ; Align 96831 1 1059 utg64_pilon exonerate:protein2genome:local gene 96869 101881 6055 - . gene_id 0 ; sequence GL50803_6582-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 96869 101881 . - . utg64_pilon exonerate:protein2genome:local exon 96869 101881 . - . insertions 9 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 96869 101881 6055 - . alignment_id 0 ; Query GL50803_6582-t26_1-p1 ; Align 101882 2 1428 ; Align 100445 478 186 ; Align 100259 541 3390 utg64_pilon exonerate:protein2genome:local gene 101896 102174 393 - . gene_id 0 ; sequence GL50803_6583-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 101896 102174 . - . utg64_pilon exonerate:protein2genome:local exon 101896 102174 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 101896 102174 393 - . alignment_id 0 ; Query GL50803_6583-t26_1-p1 ; Align 102175 1 279 utg64_pilon exonerate:protein2genome:local gene 102310 102966 1029 - . gene_id 0 ; sequence GL50803_6584-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 102310 102966 . - . utg64_pilon exonerate:protein2genome:local exon 102310 102966 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 102310 102966 1029 - . alignment_id 0 ; Query GL50803_6584-t26_1-p1 ; Align 102967 3 657 utg731_pilon exonerate:protein2genome:local gene 1097279 1097638 277 - . gene_id 0 ; sequence GL50803_6588-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1097279 1097638 . - . utg731_pilon exonerate:protein2genome:local exon 1097279 1097638 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1097279 1097638 277 - . alignment_id 0 ; Query GL50803_6588-t26_1-p1 ; Align 1097639 26 360 utg731_pilon exonerate:protein2genome:local gene 1094443 1097232 3704 - . gene_id 0 ; sequence GL50803_6589-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1094443 1097232 . - . utg731_pilon exonerate:protein2genome:local exon 1094443 1097232 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1094443 1097232 3704 - . alignment_id 0 ; Query GL50803_6589-t26_1-p1 ; Align 1097233 1 2790 utg731_pilon exonerate:protein2genome:local gene 1093255 1094394 1848 - . gene_id 0 ; sequence GL50803_6590-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1093255 1094394 . - . utg731_pilon exonerate:protein2genome:local exon 1093255 1094394 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1093255 1094394 1848 - . alignment_id 0 ; Query GL50803_6590-t26_1-p1 ; Align 1094395 1 1140 utg731_pilon exonerate:protein2genome:local gene 1090766 1091257 646 + . gene_id 0 ; sequence GL50803_6592-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1090766 1091257 . + . utg731_pilon exonerate:protein2genome:local exon 1090766 1091257 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1090766 1091257 646 + . alignment_id 0 ; Query GL50803_6592-t26_1-p1 ; Align 1090766 1 492 utg308_pilon exonerate:protein2genome:local gene 442061 444292 2699 - . gene_id 0 ; sequence GL50803_6602-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 442061 444292 . - . utg308_pilon exonerate:protein2genome:local exon 442061 444292 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 442061 444292 2699 - . alignment_id 0 ; Query GL50803_6602-t26_1-p1 ; Align 444293 1 2232 utg308_pilon exonerate:protein2genome:local gene 445326 445834 521 - . gene_id 0 ; sequence GL50803_6605-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 445326 445834 . - . utg308_pilon exonerate:protein2genome:local exon 445326 445834 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 445326 445834 521 - . alignment_id 0 ; Query GL50803_6605-t26_1-p1 ; Align 445835 1 216 ; Align 445617 74 291 utg731_pilon exonerate:protein2genome:local gene 107378 107892 485 + . gene_id 0 ; sequence GL50803_6614-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 107378 107892 . + . utg731_pilon exonerate:protein2genome:local exon 107378 107892 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 107378 107892 485 + . alignment_id 0 ; Query GL50803_6614-t26_1-p1 ; Align 107378 1 369 ; Align 107747 125 6 ; Align 107754 127 78 ; Align 107833 153 60 utg731_pilon exonerate:protein2genome:local gene 107837 109519 1683 - . gene_id 0 ; sequence GL50803_6615-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 107837 109519 . - . utg731_pilon exonerate:protein2genome:local exon 107837 109519 . - . insertions 0 ; deletions 14 utg731_pilon exonerate:protein2genome:local similarity 107837 109519 1683 - . alignment_id 0 ; Query GL50803_6615-t26_1-p1 ; Align 109520 7 246 ; Align 109274 93 540 ; Align 108734 274 42 ; Align 108692 289 75 ; Align 108617 317 387 ; Align 108230 450 84 ; Align 108146 479 309 utg731_pilon exonerate:protein2genome:local gene 109525 111865 2825 + . gene_id 0 ; sequence GL50803_6616-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 109525 111865 . + . utg731_pilon exonerate:protein2genome:local exon 109525 111865 . + . insertions 3 ; deletions 4 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 109525 111865 2825 + . alignment_id 0 ; Query GL50803_6616-t26_1-p1 ; Align 109525 10 27 ; Align 109553 19 252 ; Align 109808 103 2019 ; Align 111827 780 39 utg731_pilon exonerate:protein2genome:local gene 111876 113561 2568 - . gene_id 0 ; sequence GL50803_6617-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 111876 113561 . - . utg731_pilon exonerate:protein2genome:local exon 111876 113561 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 111876 113561 2568 - . alignment_id 0 ; Query GL50803_6617-t26_1-p1 ; Align 113562 1 1686 utg47_pilon exonerate:protein2genome:local gene 1788702 1789262 851 + . gene_id 0 ; sequence GL50803_6619-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1788702 1789262 . + . utg47_pilon exonerate:protein2genome:local exon 1788702 1789262 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1788702 1789262 851 + . alignment_id 0 ; Query GL50803_6619-t26_1-p1 ; Align 1788702 1 561 utg47_pilon exonerate:protein2genome:local gene 1794631 1798503 3168 + . gene_id 0 ; sequence GL50803_6624-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1794631 1798503 . + . utg47_pilon exonerate:protein2genome:local exon 1794631 1798503 . + . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 1794631 1798503 3168 + . alignment_id 0 ; Query GL50803_6624-t26_1-p1 ; Align 1794631 902 807 ; Align 1795438 1172 456 ; Align 1795894 1326 1887 ; Align 1797781 1957 723 utg47_pilon exonerate:protein2genome:local gene 1798746 1799501 791 + . gene_id 0 ; sequence GL50803_6625-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1798746 1799501 . + . utg47_pilon exonerate:protein2genome:local exon 1798746 1799501 . + . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 1798746 1799501 791 + . alignment_id 0 ; Query GL50803_6625-t26_1-p1 ; Align 1798746 1 63 ; Align 1798809 23 414 ; Align 1799223 164 279 utg47_pilon exonerate:protein2genome:local gene 1799638 1800246 951 - . gene_id 0 ; sequence GL50803_6626-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1799638 1800246 . - . utg47_pilon exonerate:protein2genome:local exon 1799638 1800246 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1799638 1800246 951 - . alignment_id 0 ; Query GL50803_6626-t26_1-p1 ; Align 1800247 1 609 utg11_pilon exonerate:protein2genome:local gene 1320786 1320884 106 + . gene_id 0 ; sequence GL50803_6630-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1320786 1320884 . + . utg11_pilon exonerate:protein2genome:local exon 1320786 1320884 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1320786 1320884 106 + . alignment_id 0 ; Query GL50803_6630-t26_1-p1 ; Align 1320786 3 99 utg11_pilon exonerate:protein2genome:local gene 1315645 1316865 1793 + . gene_id 0 ; sequence GL50803_6633-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1315645 1316865 . + . utg11_pilon exonerate:protein2genome:local exon 1315645 1316865 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1315645 1316865 1793 + . alignment_id 0 ; Query GL50803_6633-t26_1-p1 ; Align 1315645 1 1221 utg11_pilon exonerate:protein2genome:local gene 1311576 1311707 147 + . gene_id 0 ; sequence GL50803_6634-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1311576 1311707 . + . utg11_pilon exonerate:protein2genome:local exon 1311576 1311707 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1311576 1311707 147 + . alignment_id 0 ; Query GL50803_6634-t26_1-p1 ; Align 1311576 5 132 utg11_pilon exonerate:protein2genome:local gene 1308622 1308902 165 - . gene_id 0 ; sequence GL50803_6637-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1308622 1308902 . - . utg11_pilon exonerate:protein2genome:local exon 1308622 1308902 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 1308622 1308902 165 - . alignment_id 0 ; Query GL50803_6637-t26_1-p1 ; Align 1308903 1 249 ; Align 1308652 84 30 utg11_pilon exonerate:protein2genome:local gene 1308319 1308567 194 + . gene_id 0 ; sequence GL50803_6638-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1308319 1308567 . + . utg11_pilon exonerate:protein2genome:local exon 1308319 1308567 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1308319 1308567 194 + . alignment_id 0 ; Query GL50803_6638-t26_1-p1 ; Align 1308319 1 249 utg11_pilon exonerate:protein2genome:local gene 1306077 1308341 318 - . gene_id 0 ; sequence GL50803_6639-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1308110 1308341 . - . utg11_pilon exonerate:protein2genome:local exon 1308110 1308341 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1308108 1308109 . - . intron_id 1 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 1306139 1308109 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1306139 1306140 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1306077 1306138 . - . utg11_pilon exonerate:protein2genome:local exon 1306077 1306138 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1306077 1308341 318 - . alignment_id 0 ; Query GL50803_6639-t26_1-p1 ; Align 1308342 1 231 ; Align 1306137 79 60 utg11_pilon exonerate:protein2genome:local gene 1300241 1300486 408 - . gene_id 0 ; sequence GL50803_6647-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1300241 1300486 . - . utg11_pilon exonerate:protein2genome:local exon 1300241 1300486 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1300241 1300486 408 - . alignment_id 0 ; Query GL50803_6647-t26_1-p1 ; Align 1300487 1 246 utg265_pilon exonerate:protein2genome:local gene 612356 614908 3582 - . gene_id 0 ; sequence GL50803_6650-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 612356 614908 . - . utg265_pilon exonerate:protein2genome:local exon 612356 614908 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 612356 614908 3582 - . alignment_id 0 ; Query GL50803_6650-t26_1-p1 ; Align 614909 1 2553 utg47_pilon exonerate:protein2genome:local gene 1812884 1813633 1021 + . gene_id 0 ; sequence GL50803_6664-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1812884 1813633 . + . utg47_pilon exonerate:protein2genome:local exon 1812884 1813633 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1812884 1813633 1021 + . alignment_id 0 ; Query GL50803_6664-t26_1-p1 ; Align 1812884 135 69 ; Align 1812953 159 21 ; Align 1812974 167 660 utg47_pilon exonerate:protein2genome:local gene 1811186 1812130 1122 + . gene_id 0 ; sequence GL50803_6666-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1811186 1812130 . + . utg47_pilon exonerate:protein2genome:local exon 1811186 1812130 . + . insertions 3 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 1811186 1812130 1122 + . alignment_id 0 ; Query GL50803_6666-t26_1-p1 ; Align 1811186 1 324 ; Align 1811510 113 258 ; Align 1811771 199 360 utg47_pilon exonerate:protein2genome:local gene 1807227 1809197 3060 + . gene_id 0 ; sequence GL50803_6671-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1807227 1809197 . + . utg47_pilon exonerate:protein2genome:local exon 1807227 1809197 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1807227 1809197 3060 + . alignment_id 0 ; Query GL50803_6671-t26_1-p1 ; Align 1807227 1 399 ; Align 1807629 134 1569 utg47_pilon exonerate:protein2genome:local gene 1805801 1807135 1698 + . gene_id 0 ; sequence GL50803_6672-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1805801 1807135 . + . utg47_pilon exonerate:protein2genome:local exon 1805801 1807135 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1805801 1807135 1698 + . alignment_id 0 ; Query GL50803_6672-t26_1-p1 ; Align 1805801 1 621 ; Align 1806422 209 177 ; Align 1806599 269 537 utg265_pilon exonerate:protein2genome:local gene 747789 748499 1008 + . gene_id 0 ; sequence GL50803_6679-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 747789 748499 . + . utg265_pilon exonerate:protein2genome:local exon 747789 748499 . + . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 747789 748499 1008 + . alignment_id 0 ; Query GL50803_6679-t26_1-p1 ; Align 747789 1 660 ; Align 748449 222 51 utg265_pilon exonerate:protein2genome:local gene 746631 747665 1278 + . gene_id 0 ; sequence GL50803_6680-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 746631 747665 . + . utg265_pilon exonerate:protein2genome:local exon 746631 747665 . + . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 746631 747665 1278 + . alignment_id 0 ; Query GL50803_6680-t26_1-p1 ; Align 746631 1 867 ; Align 747498 294 168 utg265_pilon exonerate:protein2genome:local gene 737856 739691 2404 + . gene_id 0 ; sequence GL50803_6685-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 737856 739691 . + . utg265_pilon exonerate:protein2genome:local exon 737856 739691 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 737856 739691 2404 + . alignment_id 0 ; Query GL50803_6685-t26_1-p1 ; Align 737856 1 1836 utg265_pilon exonerate:protein2genome:local gene 736481 737770 1506 - . gene_id 0 ; sequence GL50803_6686-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 736481 737770 . - . utg265_pilon exonerate:protein2genome:local exon 736481 737770 . - . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 736481 737770 1506 - . alignment_id 0 ; Query GL50803_6686-t26_1-p1 ; Align 737771 1 705 ; Align 737063 236 285 ; Align 736775 331 294 utg265_pilon exonerate:protein2genome:local gene 735429 736436 1730 + . gene_id 0 ; sequence GL50803_6687-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 735429 736436 . + . utg265_pilon exonerate:protein2genome:local exon 735429 736436 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 735429 736436 1730 + . alignment_id 0 ; Query GL50803_6687-t26_1-p1 ; Align 735429 1 1008 utg265_pilon exonerate:protein2genome:local gene 734262 734906 827 + . gene_id 0 ; sequence GL50803_6691-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 734262 734906 . + . utg265_pilon exonerate:protein2genome:local exon 734262 734906 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 734262 734906 827 + . alignment_id 0 ; Query GL50803_6691-t26_1-p1 ; Align 734262 1 645 utg99_pilon exonerate:protein2genome:local gene 78257 79447 2015 + . gene_id 0 ; sequence GL50803_6700-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 78257 79447 . + . utg99_pilon exonerate:protein2genome:local exon 78257 79447 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 78257 79447 2015 + . alignment_id 0 ; Query GL50803_6700-t26_1-p1 ; Align 78257 1 1191 utg99_pilon exonerate:protein2genome:local gene 79604 81637 2508 + . gene_id 0 ; sequence GL50803_6702-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 79604 81637 . + . utg99_pilon exonerate:protein2genome:local exon 79604 81637 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 79604 81637 2508 + . alignment_id 0 ; Query GL50803_6702-t26_1-p1 ; Align 79604 1 2034 utg47_pilon exonerate:protein2genome:local gene 1740278 1741831 2478 - . gene_id 0 ; sequence GL50803_6709-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1740278 1741831 . - . utg47_pilon exonerate:protein2genome:local exon 1740278 1741831 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1740278 1741831 2478 - . alignment_id 0 ; Query GL50803_6709-t26_1-p1 ; Align 1741832 1 1554 utg11_pilon exonerate:protein2genome:local gene 408746 409051 168 + . gene_id 0 ; sequence GL50803_6722-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 408746 409051 . + . utg11_pilon exonerate:protein2genome:local exon 408746 409051 . + . insertions 0 ; deletions 0 ; frameshifts 6 utg11_pilon exonerate:protein2genome:local similarity 408746 409051 168 + . alignment_id 0 ; Query GL50803_6722-t26_1-p1 ; Align 408746 11 81 ; Align 408829 38 186 ; Align 409019 100 33 utg11_pilon exonerate:protein2genome:local gene 390801 391106 168 - . gene_id 0 ; sequence GL50803_6722-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 390801 391106 . - . utg11_pilon exonerate:protein2genome:local exon 390801 391106 . - . insertions 0 ; deletions 0 ; frameshifts 6 utg11_pilon exonerate:protein2genome:local similarity 390801 391106 168 - . alignment_id 0 ; Query GL50803_6722-t26_1-p1 ; Align 391107 11 81 ; Align 391024 38 186 ; Align 390834 100 33 utg47_pilon exonerate:protein2genome:local gene 1753213 1753578 626 + . gene_id 0 ; sequence GL50803_6724-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1753213 1753578 . + . utg47_pilon exonerate:protein2genome:local exon 1753213 1753578 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1753213 1753578 626 + . alignment_id 0 ; Query GL50803_6724-t26_1-p1 ; Align 1753213 1 366 utg47_pilon exonerate:protein2genome:local gene 1753641 1756301 3949 + . gene_id 0 ; sequence GL50803_6725-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1753641 1756301 . + . utg47_pilon exonerate:protein2genome:local exon 1753641 1756301 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1753641 1756301 3949 + . alignment_id 0 ; Query GL50803_6725-t26_1-p1 ; Align 1753641 1 1305 ; Align 1754949 436 1353 utg212_pilon exonerate:protein2genome:local gene 385702 387606 2636 - . gene_id 0 ; sequence GL50803_6731-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 385702 387606 . - . utg212_pilon exonerate:protein2genome:local exon 385702 387606 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 385702 387606 2636 - . alignment_id 0 ; Query GL50803_6731-t26_1-p1 ; Align 387607 1 1905 utg212_pilon exonerate:protein2genome:local gene 384532 385548 1608 + . gene_id 0 ; sequence GL50803_6733-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 384532 385548 . + . utg212_pilon exonerate:protein2genome:local exon 384532 385548 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 384532 385548 1608 + . alignment_id 0 ; Query GL50803_6733-t26_1-p1 ; Align 384532 1 1017 utg212_pilon exonerate:protein2genome:local gene 381576 384497 4281 + . gene_id 0 ; sequence GL50803_6735-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 381576 384497 . + . utg212_pilon exonerate:protein2genome:local exon 381576 384497 . + . insertions 9 ; deletions 3 utg212_pilon exonerate:protein2genome:local similarity 381576 384497 4281 + . alignment_id 0 ; Query GL50803_6735-t26_1-p1 ; Align 381576 1 174 ; Align 381750 60 444 ; Align 382197 208 30 ; Align 382227 220 1344 ; Align 383574 668 117 ; Align 383694 707 804 utg212_pilon exonerate:protein2genome:local gene 380477 381424 1463 + . gene_id 0 ; sequence GL50803_6736-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 380477 381424 . + . utg212_pilon exonerate:protein2genome:local exon 380477 381424 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 380477 381424 1463 + . alignment_id 0 ; Query GL50803_6736-t26_1-p1 ; Align 380477 1 948 utg212_pilon exonerate:protein2genome:local gene 373422 373904 809 - . gene_id 0 ; sequence GL50803_6744-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 373422 373904 . - . utg212_pilon exonerate:protein2genome:local exon 373422 373904 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 373422 373904 809 - . alignment_id 0 ; Query GL50803_6744-t26_1-p1 ; Align 373905 1 483 utg731_pilon exonerate:protein2genome:local gene 692434 695514 3996 + . gene_id 0 ; sequence GL50803_6751-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 692434 695514 . + . utg731_pilon exonerate:protein2genome:local exon 692434 695514 . + . insertions 15 ; deletions 4 utg731_pilon exonerate:protein2genome:local similarity 692434 695514 3996 + . alignment_id 0 ; Query GL50803_6751-t26_1-p1 ; Align 692434 1 2295 ; Align 694735 766 57 ; Align 694798 785 114 ; Align 694915 823 336 ; Align 695251 938 147 ; Align 695398 988 117 utg731_pilon exonerate:protein2genome:local gene 691980 692342 564 + . gene_id 0 ; sequence GL50803_6752-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 691980 692342 . + . utg731_pilon exonerate:protein2genome:local exon 691980 692342 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 691980 692342 564 + . alignment_id 0 ; Query GL50803_6752-t26_1-p1 ; Align 691980 17 363 utg364_pilon exonerate:protein2genome:local gene 82526 83089 935 - . gene_id 0 ; sequence GL50803_6757-t26_1-p1 ; gene_orientation . utg364_pilon exonerate:protein2genome:local cds 82526 83089 . - . utg364_pilon exonerate:protein2genome:local exon 82526 83089 . - . insertions 0 ; deletions 0 utg364_pilon exonerate:protein2genome:local similarity 82526 83089 935 - . alignment_id 0 ; Query GL50803_6757-t26_1-p1 ; Align 83090 1 564 utg16500_pilon exonerate:protein2genome:local gene 21629 22192 935 - . gene_id 0 ; sequence GL50803_6757-t26_1-p1 ; gene_orientation . utg16500_pilon exonerate:protein2genome:local cds 21629 22192 . - . utg16500_pilon exonerate:protein2genome:local exon 21629 22192 . - . insertions 0 ; deletions 0 utg16500_pilon exonerate:protein2genome:local similarity 21629 22192 935 - . alignment_id 0 ; Query GL50803_6757-t26_1-p1 ; Align 22193 1 564 utg349_pilon exonerate:protein2genome:local gene 1586320 1586958 991 + . gene_id 0 ; sequence GL50803_678-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1586320 1586958 . + . utg349_pilon exonerate:protein2genome:local exon 1586320 1586958 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1586320 1586958 991 + . alignment_id 0 ; Query GL50803_678-t26_1-p1 ; Align 1586320 1 639 utg308_pilon exonerate:protein2genome:local gene 150300 150674 626 + . gene_id 0 ; sequence GL50803_6812-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 150300 150674 . + . utg308_pilon exonerate:protein2genome:local exon 150300 150674 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 150300 150674 626 + . alignment_id 0 ; Query GL50803_6812-t26_1-p1 ; Align 150300 1 375 utg30034_pilon exonerate:protein2genome:local gene 15509 15883 626 - . gene_id 0 ; sequence GL50803_6812-t26_1-p1 ; gene_orientation . utg30034_pilon exonerate:protein2genome:local cds 15509 15883 . - . utg30034_pilon exonerate:protein2genome:local exon 15509 15883 . - . insertions 0 ; deletions 0 utg30034_pilon exonerate:protein2genome:local similarity 15509 15883 626 - . alignment_id 0 ; Query GL50803_6812-t26_1-p1 ; Align 15884 1 375 utg308_pilon exonerate:protein2genome:local gene 130270 131264 1593 + . gene_id 0 ; sequence GL50803_6835-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 130270 131264 . + . utg308_pilon exonerate:protein2genome:local exon 130270 131264 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 130270 131264 1593 + . alignment_id 0 ; Query GL50803_6835-t26_1-p1 ; Align 130270 1 822 ; Align 131094 276 171 utg349_pilon exonerate:protein2genome:local gene 1008699 1008986 422 - . gene_id 0 ; sequence GL50803_6885-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1008699 1008986 . - . utg349_pilon exonerate:protein2genome:local exon 1008699 1008986 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1008699 1008986 422 - . alignment_id 0 ; Query GL50803_6885-t26_1-p1 ; Align 1008987 1 288 utg349_pilon exonerate:protein2genome:local gene 1009066 1011789 3472 - . gene_id 0 ; sequence GL50803_6886-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1009066 1011789 . - . utg349_pilon exonerate:protein2genome:local exon 1009066 1011789 . - . insertions 6 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 1009066 1011789 3472 - . alignment_id 0 ; Query GL50803_6886-t26_1-p1 ; Align 1011790 1 426 ; Align 1011358 143 111 ; Align 1011247 182 2181 utg349_pilon exonerate:protein2genome:local gene 1012227 1013177 1355 - . gene_id 0 ; sequence GL50803_6887-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1012227 1013177 . - . utg349_pilon exonerate:protein2genome:local exon 1012227 1013177 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 1012227 1013177 1355 - . alignment_id 0 ; Query GL50803_6887-t26_1-p1 ; Align 1013178 1 708 ; Align 1012470 239 81 ; Align 1012389 267 162 utg349_pilon exonerate:protein2genome:local gene 1013197 1013895 871 - . gene_id 0 ; sequence GL50803_6888-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1013197 1013895 . - . utg349_pilon exonerate:protein2genome:local exon 1013197 1013895 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1013197 1013895 871 - . alignment_id 0 ; Query GL50803_6888-t26_1-p1 ; Align 1013896 1 21 ; Align 1013875 9 678 utg349_pilon exonerate:protein2genome:local gene 1018697 1019602 930 - . gene_id 0 ; sequence GL50803_6896-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1019089 1019602 . - . utg349_pilon exonerate:protein2genome:local exon 1019089 1019602 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1019087 1019088 . - . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 1019053 1019088 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1019053 1019054 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1018942 1019052 . - . utg349_pilon exonerate:protein2genome:local exon 1018942 1019052 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1018940 1018941 . - . intron_id 2 ; splice_site "CT" utg349_pilon exonerate:protein2genome:local intron 1018912 1018941 . - . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1018912 1018913 . - . intron_id 1 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1018697 1018911 . - . utg349_pilon exonerate:protein2genome:local exon 1018697 1018911 . - . insertions 3 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 1018697 1019602 930 - . alignment_id 0 ; Query GL50803_6896-t26_1-p1 ; Align 1019603 1 513 ; Align 1019051 173 108 ; Align 1018910 210 33 ; Align 1018877 222 30 ; Align 1018847 236 45 ; Align 1018799 251 102 utg349_pilon exonerate:protein2genome:local gene 1019743 1020819 1651 + . gene_id 0 ; sequence GL50803_6897-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1019743 1020819 . + . utg349_pilon exonerate:protein2genome:local exon 1019743 1020819 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1019743 1020819 1651 + . alignment_id 0 ; Query GL50803_6897-t26_1-p1 ; Align 1019743 1 1077 utg11_pilon exonerate:protein2genome:local gene 1047967 1048305 432 - . gene_id 0 ; sequence GL50803_6901-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1047967 1048305 . - . utg11_pilon exonerate:protein2genome:local exon 1047967 1048305 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1047967 1048305 432 - . alignment_id 0 ; Query GL50803_6901-t26_1-p1 ; Align 1048306 26 339 utg47_pilon exonerate:protein2genome:local gene 1392518 1393135 779 + . gene_id 0 ; sequence GL50803_6917-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1392518 1393135 . + . utg47_pilon exonerate:protein2genome:local exon 1392518 1393135 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1392518 1393135 779 + . alignment_id 0 ; Query GL50803_6917-t26_1-p1 ; Align 1392518 1 417 ; Align 1392935 142 201 utg47_pilon exonerate:protein2genome:local gene 1390664 1392386 1880 - . gene_id 0 ; sequence GL50803_6918-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1390664 1392386 . - . utg47_pilon exonerate:protein2genome:local exon 1390664 1392386 . - . insertions 3 ; deletions 3 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 1390664 1392386 1880 - . alignment_id 0 ; Query GL50803_6918-t26_1-p1 ; Align 1392387 1 762 ; Align 1391623 256 93 ; Align 1391527 287 285 ; Align 1391242 383 84 ; Align 1391156 412 492 utg47_pilon exonerate:protein2genome:local gene 1387758 1389791 1657 + . gene_id 0 ; sequence GL50803_6919-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1387758 1389791 . + . utg47_pilon exonerate:protein2genome:local exon 1387758 1389791 . + . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1387758 1389791 1657 + . alignment_id 0 ; Query GL50803_6919-t26_1-p1 ; Align 1387758 1 636 ; Align 1388394 214 201 ; Align 1388595 282 936 ; Align 1389531 595 261 utg47_pilon exonerate:protein2genome:local gene 1382489 1387471 5893 - . gene_id 0 ; sequence GL50803_6920-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1382489 1387471 . - . utg47_pilon exonerate:protein2genome:local exon 1382489 1387471 . - . insertions 3 ; deletions 1 ; frameshifts 3 utg47_pilon exonerate:protein2genome:local similarity 1382489 1387471 5893 - . alignment_id 0 ; Query GL50803_6920-t26_1-p1 ; Align 1387472 1 2307 ; Align 1385163 771 729 ; Align 1384433 1014 1644 ; Align 1382786 1562 297 utg731_pilon exonerate:protein2genome:local gene 682297 683781 1804 + . gene_id 0 ; sequence GL50803_6927-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 682297 683781 . + . utg731_pilon exonerate:protein2genome:local exon 682297 683781 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 682297 683781 1804 + . alignment_id 0 ; Query GL50803_6927-t26_1-p1 ; Align 682297 290 1002 ; Align 683299 625 483 utg731_pilon exonerate:protein2genome:local gene 685606 686553 1045 - . gene_id 0 ; sequence GL50803_6928-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 685606 686553 . - . utg731_pilon exonerate:protein2genome:local exon 685606 686553 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 685606 686553 1045 - . alignment_id 0 ; Query GL50803_6928-t26_1-p1 ; Align 686554 3 702 ; Align 685852 238 246 utg731_pilon exonerate:protein2genome:local gene 686576 686983 584 + . gene_id 0 ; sequence GL50803_6929-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 686576 686983 . + . utg731_pilon exonerate:protein2genome:local exon 686576 686983 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 686576 686983 584 + . alignment_id 0 ; Query GL50803_6929-t26_1-p1 ; Align 686576 1 408 utg212_pilon exonerate:protein2genome:local gene 190032 193645 5162 + . gene_id 0 ; sequence GL50803_6933-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 190032 193645 . + . utg212_pilon exonerate:protein2genome:local exon 190032 193645 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 190032 193645 5162 + . alignment_id 0 ; Query GL50803_6933-t26_1-p1 ; Align 190032 1 1770 ; Align 191804 591 3 ; Align 191807 593 1839 utg212_pilon exonerate:protein2genome:local gene 198458 200338 3214 - . gene_id 0 ; sequence GL50803_6939-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 198458 200338 . - . utg212_pilon exonerate:protein2genome:local exon 198458 200338 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 198458 200338 3214 - . alignment_id 0 ; Query GL50803_6939-t26_1-p1 ; Align 200339 1 1881 utg265_pilon exonerate:protein2genome:local gene 679325 679447 145 - . gene_id 0 ; sequence GL50803_694-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 679325 679447 . - . utg265_pilon exonerate:protein2genome:local exon 679325 679447 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 679325 679447 145 - . alignment_id 0 ; Query GL50803_694-t26_1-p1 ; Align 679448 3 123 utg212_pilon exonerate:protein2genome:local gene 201864 203834 2356 + . gene_id 0 ; sequence GL50803_6942-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 201864 203834 . + . utg212_pilon exonerate:protein2genome:local exon 201864 203834 . + . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 201864 203834 2356 + . alignment_id 0 ; Query GL50803_6942-t26_1-p1 ; Align 201864 1 1308 ; Align 203175 437 660 utg47_pilon exonerate:protein2genome:local gene 1314186 1315802 2389 + . gene_id 0 ; sequence GL50803_6980-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1314186 1315802 . + . utg47_pilon exonerate:protein2genome:local exon 1314186 1315802 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1314186 1315802 2389 + . alignment_id 0 ; Query GL50803_6980-t26_1-p1 ; Align 1314186 1 1617 utg47_pilon exonerate:protein2genome:local gene 1318089 1319581 1862 - . gene_id 0 ; sequence GL50803_6982-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1318089 1319581 . - . utg47_pilon exonerate:protein2genome:local exon 1318089 1319581 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1318089 1319581 1862 - . alignment_id 0 ; Query GL50803_6982-t26_1-p1 ; Align 1319582 1 636 ; Align 1318944 214 855 utg349_pilon exonerate:protein2genome:local gene 1674170 1674427 428 - . gene_id 0 ; sequence GL50803_7007-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1674170 1674427 . - . utg349_pilon exonerate:protein2genome:local exon 1674170 1674427 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1674170 1674427 428 - . alignment_id 0 ; Query GL50803_7007-t26_1-p1 ; Align 1674428 1 258 utg349_pilon exonerate:protein2genome:local gene 1673305 1674063 1172 - . gene_id 0 ; sequence GL50803_7009-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1673305 1674063 . - . utg349_pilon exonerate:protein2genome:local exon 1673305 1674063 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1673305 1674063 1172 - . alignment_id 0 ; Query GL50803_7009-t26_1-p1 ; Align 1674064 1 759 utg47_pilon exonerate:protein2genome:local gene 2005994 2006719 1160 + . gene_id 0 ; sequence GL50803_7018-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2005994 2006719 . + . utg47_pilon exonerate:protein2genome:local exon 2005994 2006719 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2005994 2006719 1160 + . alignment_id 0 ; Query GL50803_7018-t26_1-p1 ; Align 2005994 1 726 utg47_pilon exonerate:protein2genome:local gene 2006991 2007245 238 + . gene_id 0 ; sequence GL50803_7019-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2006991 2007245 . + . utg47_pilon exonerate:protein2genome:local exon 2006991 2007245 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2006991 2007245 238 + . alignment_id 0 ; Query GL50803_7019-t26_1-p1 ; Align 2006991 1 255 utg47_pilon exonerate:protein2genome:local gene 2007842 2009293 2348 - . gene_id 0 ; sequence GL50803_7021-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2007842 2009293 . - . utg47_pilon exonerate:protein2genome:local exon 2007842 2009293 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2007842 2009293 2348 - . alignment_id 0 ; Query GL50803_7021-t26_1-p1 ; Align 2009294 1 1029 ; Align 2008262 344 420 utg47_pilon exonerate:protein2genome:local gene 2010945 2011493 527 - . gene_id 0 ; sequence GL50803_7026-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2010945 2011493 . - . utg47_pilon exonerate:protein2genome:local exon 2010945 2011493 . - . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 2010945 2011493 527 - . alignment_id 0 ; Query GL50803_7026-t26_1-p1 ; Align 2011494 1 216 ; Align 2011278 75 78 ; Align 2011200 103 255 utg47_pilon exonerate:protein2genome:local gene 1977806 1978606 1240 - . gene_id 0 ; sequence GL50803_7029-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1977806 1978606 . - . utg47_pilon exonerate:protein2genome:local exon 1977806 1978606 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1977806 1978606 1240 - . alignment_id 0 ; Query GL50803_7029-t26_1-p1 ; Align 1978607 1 801 utg47_pilon exonerate:protein2genome:local gene 1978647 1979222 847 - . gene_id 0 ; sequence GL50803_7030-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1978647 1979222 . - . utg47_pilon exonerate:protein2genome:local exon 1978647 1979222 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1978647 1979222 847 - . alignment_id 0 ; Query GL50803_7030-t26_1-p1 ; Align 1979223 1 576 utg47_pilon exonerate:protein2genome:local gene 1979305 1982292 3862 + . gene_id 0 ; sequence GL50803_7031-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1979305 1982292 . + . utg47_pilon exonerate:protein2genome:local exon 1979305 1982292 . + . insertions 18 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 1979305 1982292 3862 + . alignment_id 0 ; Query GL50803_7031-t26_1-p1 ; Align 1979305 1 1206 ; Align 1980517 403 84 ; Align 1980613 431 255 ; Align 1980868 517 402 ; Align 1981270 654 1023 utg47_pilon exonerate:protein2genome:local gene 1983918 1984931 1312 - . gene_id 0 ; sequence GL50803_7035-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1984078 1984931 . - . utg47_pilon exonerate:protein2genome:local exon 1984078 1984931 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1984076 1984077 . - . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1984048 1984077 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1984048 1984049 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1983918 1984047 . - . utg47_pilon exonerate:protein2genome:local exon 1983918 1984047 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1983918 1984931 1312 - . alignment_id 0 ; Query GL50803_7035-t26_1-p1 ; Align 1984932 1 852 ; Align 1984047 286 129 utg265_pilon exonerate:protein2genome:local gene 521173 521467 405 - . gene_id 0 ; sequence GL50803_7046-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 521173 521467 . - . utg265_pilon exonerate:protein2genome:local exon 521173 521467 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 521173 521467 405 - . alignment_id 0 ; Query GL50803_7046-t26_1-p1 ; Align 521468 1 201 ; Align 521266 68 93 utg11_pilon exonerate:protein2genome:local gene 1255587 1256552 1585 + . gene_id 0 ; sequence GL50803_7081-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1255587 1256552 . + . utg11_pilon exonerate:protein2genome:local exon 1255587 1256552 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1255587 1256552 1585 + . alignment_id 0 ; Query GL50803_7081-t26_1-p1 ; Align 1255587 1 966 utg11_pilon exonerate:protein2genome:local gene 1255198 1255464 447 - . gene_id 0 ; sequence GL50803_7082-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1255198 1255464 . - . utg11_pilon exonerate:protein2genome:local exon 1255198 1255464 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1255198 1255464 447 - . alignment_id 0 ; Query GL50803_7082-t26_1-p1 ; Align 1255465 1 267 utg47_pilon exonerate:protein2genome:local gene 738917 739929 1435 - . gene_id 0 ; sequence GL50803_7103-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 738917 739929 . - . utg47_pilon exonerate:protein2genome:local exon 738917 739929 . - . insertions 0 ; deletions 5 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 738917 739929 1435 - . alignment_id 0 ; Query GL50803_7103-t26_1-p1 ; Align 739930 159 471 ; Align 739459 320 90 ; Align 739367 351 450 utg47_pilon exonerate:protein2genome:local gene 743173 743412 402 + . gene_id 0 ; sequence GL50803_7110-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 743173 743412 . + . utg47_pilon exonerate:protein2genome:local exon 743173 743412 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 743173 743412 402 + . alignment_id 0 ; Query GL50803_7110-t26_1-p1 ; Align 743173 3 240 utg47_pilon exonerate:protein2genome:local gene 746804 747616 1033 - . gene_id 0 ; sequence GL50803_7114-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 746804 747616 . - . utg47_pilon exonerate:protein2genome:local exon 746804 747616 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 746804 747616 1033 - . alignment_id 0 ; Query GL50803_7114-t26_1-p1 ; Align 747617 3 813 utg349_pilon exonerate:protein2genome:local gene 1473554 1474195 1000 - . gene_id 0 ; sequence GL50803_7126-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1473554 1474195 . - . utg349_pilon exonerate:protein2genome:local exon 1473554 1474195 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1473554 1474195 1000 - . alignment_id 0 ; Query GL50803_7126-t26_1-p1 ; Align 1474196 211 642 utg349_pilon exonerate:protein2genome:local gene 1477625 1481275 5103 - . gene_id 0 ; sequence GL50803_7130-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1477625 1481275 . - . utg349_pilon exonerate:protein2genome:local exon 1477625 1481275 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1477625 1481275 5103 - . alignment_id 0 ; Query GL50803_7130-t26_1-p1 ; Align 1481276 54 3651 utg731_pilon exonerate:protein2genome:local gene 1254164 1255837 2244 - . gene_id 0 ; sequence GL50803_7134-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1254164 1255837 . - . utg731_pilon exonerate:protein2genome:local exon 1254164 1255837 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1254164 1255837 2244 - . alignment_id 0 ; Query GL50803_7134-t26_1-p1 ; Align 1255838 1 1674 utg731_pilon exonerate:protein2genome:local gene 1255950 1256345 489 - . gene_id 0 ; sequence GL50803_7135-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1255950 1256345 . - . utg731_pilon exonerate:protein2genome:local exon 1255950 1256345 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1255950 1256345 489 - . alignment_id 0 ; Query GL50803_7135-t26_1-p1 ; Align 1256346 1 396 utg731_pilon exonerate:protein2genome:local gene 1256394 1256507 148 - . gene_id 0 ; sequence GL50803_7136-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1256394 1256507 . - . utg731_pilon exonerate:protein2genome:local exon 1256394 1256507 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1256394 1256507 148 - . alignment_id 0 ; Query GL50803_7136-t26_1-p1 ; Align 1256508 1 114 utg731_pilon exonerate:protein2genome:local gene 1256514 1256717 143 + . gene_id 0 ; sequence GL50803_7137-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1256514 1256717 . + . utg731_pilon exonerate:protein2genome:local exon 1256514 1256717 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1256514 1256717 143 + . alignment_id 0 ; Query GL50803_7137-t26_1-p1 ; Align 1256514 1 33 ; Align 1256547 13 66 ; Align 1256613 36 105 utg731_pilon exonerate:protein2genome:local gene 1259118 1259903 1144 - . gene_id 0 ; sequence GL50803_7139-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1259118 1259903 . - . utg731_pilon exonerate:protein2genome:local exon 1259118 1259903 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1259118 1259903 1144 - . alignment_id 0 ; Query GL50803_7139-t26_1-p1 ; Align 1259904 1 786 utg731_pilon exonerate:protein2genome:local gene 1263632 1263733 125 - . gene_id 0 ; sequence GL50803_7142-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1263632 1263733 . - . utg731_pilon exonerate:protein2genome:local exon 1263632 1263733 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1263632 1263733 125 - . alignment_id 0 ; Query GL50803_7142-t26_1-p1 ; Align 1263734 1 102 utg731_pilon exonerate:protein2genome:local gene 1264859 1265317 368 - . gene_id 0 ; sequence GL50803_7144-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1264859 1265317 . - . utg731_pilon exonerate:protein2genome:local exon 1264859 1265317 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1264859 1265317 368 - . alignment_id 0 ; Query GL50803_7144-t26_1-p1 ; Align 1265318 1 459 utg731_pilon exonerate:protein2genome:local gene 1266231 1266341 106 + . gene_id 0 ; sequence GL50803_7146-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1266231 1266341 . + . utg731_pilon exonerate:protein2genome:local exon 1266231 1266341 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1266231 1266341 106 + . alignment_id 0 ; Query GL50803_7146-t26_1-p1 ; Align 1266231 2 111 utg11_pilon exonerate:protein2genome:local gene 1090748 1093684 3576 - . gene_id 0 ; sequence GL50803_7154-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1090748 1093684 . - . utg11_pilon exonerate:protein2genome:local exon 1090748 1093684 . - . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 1090748 1093684 3576 - . alignment_id 0 ; Query GL50803_7154-t26_1-p1 ; Align 1093685 1 1029 ; Align 1092656 345 1299 ; Align 1091357 781 609 utg18_pilon exonerate:protein2genome:local gene 128765 131186 3392 + . gene_id 0 ; sequence GL50803_7183-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 128765 131186 . + . utg18_pilon exonerate:protein2genome:local exon 128765 131186 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg18_pilon exonerate:protein2genome:local similarity 128765 131186 3392 + . alignment_id 0 ; Query GL50803_7183-t26_1-p1 ; Align 128765 1 123 ; Align 128889 42 2298 utg212_pilon exonerate:protein2genome:local gene 91618 94929 4629 + . gene_id 0 ; sequence GL50803_7188-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 91618 94929 . + . utg212_pilon exonerate:protein2genome:local exon 91618 94929 . + . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 91618 94929 4629 + . alignment_id 0 ; Query GL50803_7188-t26_1-p1 ; Align 91618 1 2244 ; Align 93865 749 1065 utg212_pilon exonerate:protein2genome:local gene 95027 95401 561 - . gene_id 0 ; sequence GL50803_7190-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 95027 95401 . - . utg212_pilon exonerate:protein2genome:local exon 95027 95401 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 95027 95401 561 - . alignment_id 0 ; Query GL50803_7190-t26_1-p1 ; Align 95402 1 375 utg212_pilon exonerate:protein2genome:local gene 99938 103918 5542 - . gene_id 0 ; sequence GL50803_7192-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 99938 103918 . - . utg212_pilon exonerate:protein2genome:local exon 99938 103918 . - . insertions 3 ; deletions 1 utg212_pilon exonerate:protein2genome:local similarity 99938 103918 5542 - . alignment_id 0 ; Query GL50803_7192-t26_1-p1 ; Align 103919 1 2028 ; Align 101891 678 345 ; Align 101543 793 1605 utg212_pilon exonerate:protein2genome:local gene 104242 106974 4103 + . gene_id 0 ; sequence GL50803_7195-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 104242 106974 . + . utg212_pilon exonerate:protein2genome:local exon 104242 106974 . + . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 104242 106974 4103 + . alignment_id 0 ; Query GL50803_7195-t26_1-p1 ; Align 104242 1 96 ; Align 104341 33 2634 utg212_pilon exonerate:protein2genome:local gene 126023 126298 211 - . gene_id 0 ; sequence GL50803_7198-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 126023 126298 . - . utg212_pilon exonerate:protein2genome:local exon 126023 126298 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 126023 126298 211 - . alignment_id 0 ; Query GL50803_7198-t26_1-p1 ; Align 126299 1 276 utg47_pilon exonerate:protein2genome:local gene 1587051 1587665 923 + . gene_id 0 ; sequence GL50803_7203-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1587051 1587665 . + . utg47_pilon exonerate:protein2genome:local exon 1587051 1587665 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1587051 1587665 923 + . alignment_id 0 ; Query GL50803_7203-t26_1-p1 ; Align 1587051 1 615 utg47_pilon exonerate:protein2genome:local gene 1587719 1588195 670 - . gene_id 0 ; sequence GL50803_7204-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1587719 1588195 . - . utg47_pilon exonerate:protein2genome:local exon 1587719 1588195 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1587719 1588195 670 - . alignment_id 0 ; Query GL50803_7204-t26_1-p1 ; Align 1588196 1 477 utg47_pilon exonerate:protein2genome:local gene 1593119 1596289 5016 - . gene_id 0 ; sequence GL50803_7207-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1593119 1596289 . - . utg47_pilon exonerate:protein2genome:local exon 1593119 1596289 . - . insertions 0 ; deletions 1 ; frameshifts 3 utg47_pilon exonerate:protein2genome:local similarity 1593119 1596289 5016 - . alignment_id 0 ; Query GL50803_7207-t26_1-p1 ; Align 1596290 2 1041 ; Align 1595247 350 2055 ; Align 1593191 1035 72 utg265_pilon exonerate:protein2genome:local gene 511897 513621 1746 + . gene_id 0 ; sequence GL50803_7230-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 511897 513257 . + . utg265_pilon exonerate:protein2genome:local exon 511897 513257 . + . insertions 18 ; deletions 7 utg265_pilon exonerate:protein2genome:local splice5 513258 513259 . + . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 513258 513290 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 513289 513290 . + . intron_id 0 ; splice_site "CC" utg265_pilon exonerate:protein2genome:local cds 513291 513621 . + . utg265_pilon exonerate:protein2genome:local exon 513291 513621 . + . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 511897 513621 1746 + . alignment_id 0 ; Query GL50803_7230-t26_1-p1 ; Align 511897 1 465 ; Align 512362 157 63 ; Align 512428 178 51 ; Align 512479 200 294 ; Align 512773 299 102 ; Align 512878 333 273 ; Align 513160 424 72 ; Align 513235 448 21 ; Align 513292 456 54 ; Align 513346 475 81 ; Align 513427 503 195 utg265_pilon exonerate:protein2genome:local gene 513793 514083 465 - . gene_id 0 ; sequence GL50803_7231-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 513793 514083 . - . utg265_pilon exonerate:protein2genome:local exon 513793 514083 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 513793 514083 465 - . alignment_id 0 ; Query GL50803_7231-t26_1-p1 ; Align 514084 1 291 utg265_pilon exonerate:protein2genome:local gene 514374 515642 1471 + . gene_id 0 ; sequence GL50803_7233-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 514374 515642 . + . utg265_pilon exonerate:protein2genome:local exon 514374 515642 . + . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 514374 515642 1471 + . alignment_id 0 ; Query GL50803_7233-t26_1-p1 ; Align 514374 6 1200 ; Align 515574 410 69 utg265_pilon exonerate:protein2genome:local gene 515700 516806 1242 - . gene_id 0 ; sequence GL50803_7234-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 515700 516806 . - . utg265_pilon exonerate:protein2genome:local exon 515700 516806 . - . insertions 0 ; deletions 9 utg265_pilon exonerate:protein2genome:local similarity 515700 516806 1242 - . alignment_id 0 ; Query GL50803_7234-t26_1-p1 ; Align 516807 1 225 ; Align 516582 77 216 ; Align 516366 152 225 ; Align 516141 230 30 ; Align 516111 241 9 ; Align 516102 245 402 utg265_pilon exonerate:protein2genome:local gene 518044 518753 886 + . gene_id 0 ; sequence GL50803_7236-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 518044 518753 . + . utg265_pilon exonerate:protein2genome:local exon 518044 518753 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 518044 518753 886 + . alignment_id 0 ; Query GL50803_7236-t26_1-p1 ; Align 518044 251 363 ; Align 518409 372 3 ; Align 518412 374 342 utg64_pilon exonerate:protein2genome:local gene 404611 405585 1335 + . gene_id 0 ; sequence GL50803_7240-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 404611 405585 . + . utg64_pilon exonerate:protein2genome:local exon 404611 405585 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 404611 405585 1335 + . alignment_id 0 ; Query GL50803_7240-t26_1-p1 ; Align 404611 4 405 ; Align 405016 140 570 utg64_pilon exonerate:protein2genome:local gene 402782 403507 1122 - . gene_id 0 ; sequence GL50803_7242-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 402782 403507 . - . utg64_pilon exonerate:protein2genome:local exon 402782 403507 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 402782 403507 1122 - . alignment_id 0 ; Query GL50803_7242-t26_1-p1 ; Align 403508 1 726 utg64_pilon exonerate:protein2genome:local gene 400070 402673 3553 - . gene_id 0 ; sequence GL50803_7243-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 400070 402673 . - . utg64_pilon exonerate:protein2genome:local exon 400070 402673 . - . insertions 0 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 400070 402673 3553 - . alignment_id 0 ; Query GL50803_7243-t26_1-p1 ; Align 402674 1 1062 ; Align 401612 356 15 ; Align 401597 364 1527 utg64_pilon exonerate:protein2genome:local gene 399449 400024 889 - . gene_id 0 ; sequence GL50803_7244-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 399449 400024 . - . utg64_pilon exonerate:protein2genome:local exon 399449 400024 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 399449 400024 889 - . alignment_id 0 ; Query GL50803_7244-t26_1-p1 ; Align 400025 1 576 utg64_pilon exonerate:protein2genome:local gene 399112 399405 294 - . gene_id 0 ; sequence GL50803_7245-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 399112 399405 . - . utg64_pilon exonerate:protein2genome:local exon 399112 399405 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 399112 399405 294 - . alignment_id 0 ; Query GL50803_7245-t26_1-p1 ; Align 399406 9 294 utg64_pilon exonerate:protein2genome:local gene 399073 399405 551 + . gene_id 0 ; sequence GL50803_7246-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 399073 399405 . + . utg64_pilon exonerate:protein2genome:local exon 399073 399405 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 399073 399405 551 + . alignment_id 0 ; Query GL50803_7246-t26_1-p1 ; Align 399073 1 333 utg349_pilon exonerate:protein2genome:local gene 221929 222807 1172 + . gene_id 0 ; sequence GL50803_7259-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 221929 222807 . + . utg349_pilon exonerate:protein2genome:local exon 221929 222807 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 221929 222807 1172 + . alignment_id 0 ; Query GL50803_7259-t26_1-p1 ; Align 221929 6 693 ; Align 222625 237 183 utg349_pilon exonerate:protein2genome:local gene 220965 221903 1562 + . gene_id 0 ; sequence GL50803_7260-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 220965 221903 . + . utg349_pilon exonerate:protein2genome:local exon 220965 221903 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 220965 221903 1562 + . alignment_id 0 ; Query GL50803_7260-t26_1-p1 ; Align 220965 1 939 utg349_pilon exonerate:protein2genome:local gene 219700 220833 2087 + . gene_id 0 ; sequence GL50803_7261-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 219700 220833 . + . utg349_pilon exonerate:protein2genome:local exon 219700 220833 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 219700 220833 2087 + . alignment_id 0 ; Query GL50803_7261-t26_1-p1 ; Align 219700 1 1134 utg731_pilon exonerate:protein2genome:local gene 442949 446437 5115 + . gene_id 0 ; sequence GL50803_7268-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 442949 445319 . + . utg731_pilon exonerate:protein2genome:local exon 442949 445319 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 445320 445321 . + . intron_id 1 ; splice_site "GC" utg731_pilon exonerate:protein2genome:local intron 445320 445349 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 445348 445349 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 445350 446437 . + . utg731_pilon exonerate:protein2genome:local exon 445350 446437 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 442949 446437 5115 + . alignment_id 0 ; Query GL50803_7268-t26_1-p1 ; Align 442949 1 2370 ; Align 445352 793 1050 ; Align 446402 1144 36 utg731_pilon exonerate:protein2genome:local gene 447835 449952 2861 + . gene_id 0 ; sequence GL50803_7270-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 447835 449952 . + . utg731_pilon exonerate:protein2genome:local exon 447835 449952 . + . insertions 0 ; deletions 6 utg731_pilon exonerate:protein2genome:local similarity 447835 449952 2861 + . alignment_id 0 ; Query GL50803_7270-t26_1-p1 ; Align 447835 3 348 ; Align 448183 122 27 ; Align 448210 132 273 ; Align 448483 224 1299 ; Align 449782 658 171 utg731_pilon exonerate:protein2genome:local gene 450326 451021 570 + . gene_id 0 ; sequence GL50803_7272-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 450326 451021 . + . utg731_pilon exonerate:protein2genome:local exon 450326 451021 . + . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 450326 451021 570 + . alignment_id 0 ; Query GL50803_7272-t26_1-p1 ; Align 450326 1 123 ; Align 450458 42 564 utg11_pilon exonerate:protein2genome:local gene 1614189 1614461 361 + . gene_id 0 ; sequence GL50803_7285-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1614189 1614461 . + . utg11_pilon exonerate:protein2genome:local exon 1614189 1614461 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1614189 1614461 361 + . alignment_id 0 ; Query GL50803_7285-t26_1-p1 ; Align 1614189 1 273 utg11_pilon exonerate:protein2genome:local gene 1614543 1615421 1297 - . gene_id 0 ; sequence GL50803_7287-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1614543 1615421 . - . utg11_pilon exonerate:protein2genome:local exon 1614543 1615421 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1614543 1615421 1297 - . alignment_id 0 ; Query GL50803_7287-t26_1-p1 ; Align 1615422 1 879 utg11_pilon exonerate:protein2genome:local gene 1619185 1619739 864 - . gene_id 0 ; sequence GL50803_7296-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1619185 1619739 . - . utg11_pilon exonerate:protein2genome:local exon 1619185 1619739 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1619185 1619739 864 - . alignment_id 0 ; Query GL50803_7296-t26_1-p1 ; Align 1619740 1 555 utg11_pilon exonerate:protein2genome:local gene 1463294 1463947 988 + . gene_id 0 ; sequence GL50803_7306-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1463294 1463947 . + . utg11_pilon exonerate:protein2genome:local exon 1463294 1463947 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1463294 1463947 988 + . alignment_id 0 ; Query GL50803_7306-t26_1-p1 ; Align 1463294 4 654 utg11_pilon exonerate:protein2genome:local gene 1466930 1467808 1301 + . gene_id 0 ; sequence GL50803_7309-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1466930 1467808 . + . utg11_pilon exonerate:protein2genome:local exon 1466930 1467808 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1466930 1467808 1301 + . alignment_id 0 ; Query GL50803_7309-t26_1-p1 ; Align 1466930 1 879 utg731_pilon exonerate:protein2genome:local gene 255523 255690 134 + . gene_id 0 ; sequence GL50803_7317-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 255523 255690 . + . utg731_pilon exonerate:protein2genome:local exon 255523 255690 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 255523 255690 134 + . alignment_id 0 ; Query GL50803_7317-t26_1-p1 ; Align 255523 1 168 utg18_pilon exonerate:protein2genome:local gene 213507 214121 807 + . gene_id 0 ; sequence GL50803_7323-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 213507 214121 . + . utg18_pilon exonerate:protein2genome:local exon 213507 214121 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 213507 214121 807 + . alignment_id 0 ; Query GL50803_7323-t26_1-p1 ; Align 213507 1 615 utg18_pilon exonerate:protein2genome:local gene 198226 200106 2447 - . gene_id 0 ; sequence GL50803_7328-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 198226 200106 . - . utg18_pilon exonerate:protein2genome:local exon 198226 200106 . - . insertions 21 ; deletions 5 utg18_pilon exonerate:protein2genome:local similarity 198226 200106 2447 - . alignment_id 0 ; Query GL50803_7328-t26_1-p1 ; Align 200107 1 963 ; Align 199129 322 129 ; Align 198994 365 276 ; Align 198718 458 246 ; Align 198472 541 72 ; Align 198400 568 174 utg64_pilon exonerate:protein2genome:local gene 277351 279252 2754 - . gene_id 0 ; sequence GL50803_7343-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 277351 279252 . - . utg64_pilon exonerate:protein2genome:local exon 277351 279252 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 277351 279252 2754 - . alignment_id 0 ; Query GL50803_7343-t26_1-p1 ; Align 279253 1 1902 utg349_pilon exonerate:protein2genome:local gene 1174931 1175683 1193 - . gene_id 0 ; sequence GL50803_7348-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1174931 1175683 . - . utg349_pilon exonerate:protein2genome:local exon 1174931 1175683 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1174931 1175683 1193 - . alignment_id 0 ; Query GL50803_7348-t26_1-p1 ; Align 1175684 1 753 utg349_pilon exonerate:protein2genome:local gene 1175769 1177514 2256 + . gene_id 0 ; sequence GL50803_7349-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1175769 1177514 . + . utg349_pilon exonerate:protein2genome:local exon 1175769 1177514 . + . insertions 0 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 1175769 1177514 2256 + . alignment_id 0 ; Query GL50803_7349-t26_1-p1 ; Align 1175769 1 339 ; Align 1176108 119 1407 utg349_pilon exonerate:protein2genome:local gene 1177542 1182163 6343 - . gene_id 0 ; sequence GL50803_7350-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1179580 1182163 . - . utg349_pilon exonerate:protein2genome:local exon 1179580 1182163 . - . insertions 3 ; deletions 6 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local splice5 1179578 1179579 . - . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 1179532 1179579 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1179532 1179533 . - . intron_id 0 ; splice_site "TG" utg349_pilon exonerate:protein2genome:local cds 1177542 1179531 . - . utg349_pilon exonerate:protein2genome:local exon 1177542 1179531 . - . insertions 0 ; deletions 8 utg349_pilon exonerate:protein2genome:local similarity 1177542 1182163 6343 - . alignment_id 0 ; Query GL50803_7350-t26_1-p1 ; Align 1182164 3 36 ; Align 1182126 15 696 ; Align 1181430 251 120 ; Align 1181310 292 129 ; Align 1181178 335 117 ; Align 1181061 375 1479 ; Align 1179531 869 1401 ; Align 1178130 1337 171 ; Align 1177959 1398 51 ; Align 1177908 1418 366 utg349_pilon exonerate:protein2genome:local gene 1182205 1182390 296 + . gene_id 0 ; sequence GL50803_7351-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1182205 1182390 . + . utg349_pilon exonerate:protein2genome:local exon 1182205 1182390 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1182205 1182390 296 + . alignment_id 0 ; Query GL50803_7351-t26_1-p1 ; Align 1182205 1 186 utg349_pilon exonerate:protein2genome:local gene 1182383 1183144 915 + . gene_id 0 ; sequence GL50803_7352-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1182383 1183144 . + . utg349_pilon exonerate:protein2genome:local exon 1182383 1183144 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 1182383 1183144 915 + . alignment_id 0 ; Query GL50803_7352-t26_1-p1 ; Align 1182383 1 705 ; Align 1183088 238 57 utg349_pilon exonerate:protein2genome:local gene 1183198 1183782 924 + . gene_id 0 ; sequence GL50803_7353-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1183198 1183782 . + . utg349_pilon exonerate:protein2genome:local exon 1183198 1183782 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1183198 1183782 924 + . alignment_id 0 ; Query GL50803_7353-t26_1-p1 ; Align 1183198 1 585 utg349_pilon exonerate:protein2genome:local gene 1187331 1188941 1631 + . gene_id 0 ; sequence GL50803_7356-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1187331 1188941 . + . utg349_pilon exonerate:protein2genome:local exon 1187331 1188941 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1187331 1188941 1631 + . alignment_id 0 ; Query GL50803_7356-t26_1-p1 ; Align 1187331 1 1611 utg47_pilon exonerate:protein2genome:local gene 2224089 2224991 1416 + . gene_id 0 ; sequence GL50803_7368-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2224089 2224991 . + . utg47_pilon exonerate:protein2genome:local exon 2224089 2224991 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2224089 2224991 1416 + . alignment_id 0 ; Query GL50803_7368-t26_1-p1 ; Align 2224089 1 903 utg47_pilon exonerate:protein2genome:local gene 2221478 2221582 138 + . gene_id 0 ; sequence GL50803_7369-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2221478 2221582 . + . utg47_pilon exonerate:protein2genome:local exon 2221478 2221582 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2221478 2221582 138 + . alignment_id 0 ; Query GL50803_7369-t26_1-p1 ; Align 2221478 2 105 utg47_pilon exonerate:protein2genome:local gene 2214625 2219301 5876 - . gene_id 0 ; sequence GL50803_7373-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2214625 2219301 . - . utg47_pilon exonerate:protein2genome:local exon 2214625 2219301 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2214625 2219301 5876 - . alignment_id 0 ; Query GL50803_7373-t26_1-p1 ; Align 2219302 2 4437 ; Align 2214865 1482 240 utg47_pilon exonerate:protein2genome:local gene 2214164 2214550 585 - . gene_id 0 ; sequence GL50803_7374-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2214164 2214550 . - . utg47_pilon exonerate:protein2genome:local exon 2214164 2214550 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2214164 2214550 585 - . alignment_id 0 ; Query GL50803_7374-t26_1-p1 ; Align 2214551 1 24 ; Align 2214527 10 363 utg47_pilon exonerate:protein2genome:local gene 2211718 2214096 3117 - . gene_id 0 ; sequence GL50803_7375-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2211718 2214096 . - . utg47_pilon exonerate:protein2genome:local exon 2211718 2214096 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2211718 2214096 3117 - . alignment_id 0 ; Query GL50803_7375-t26_1-p1 ; Align 2214097 1 483 ; Align 2213614 163 1896 utg731_pilon exonerate:protein2genome:local gene 654852 654989 105 - . gene_id 0 ; sequence GL50803_7387-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 654852 654989 . - . utg731_pilon exonerate:protein2genome:local exon 654852 654989 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 654852 654989 105 - . alignment_id 0 ; Query GL50803_7387-t26_1-p1 ; Align 654990 14 138 utg731_pilon exonerate:protein2genome:local gene 654821 654979 238 + . gene_id 0 ; sequence GL50803_7388-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 654821 654979 . + . utg731_pilon exonerate:protein2genome:local exon 654821 654979 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 654821 654979 238 + . alignment_id 0 ; Query GL50803_7388-t26_1-p1 ; Align 654821 1 159 utg731_pilon exonerate:protein2genome:local gene 653233 654525 1633 - . gene_id 0 ; sequence GL50803_7390-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 653233 654525 . - . utg731_pilon exonerate:protein2genome:local exon 653233 654525 . - . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 653233 654525 1633 - . alignment_id 0 ; Query GL50803_7390-t26_1-p1 ; Align 654526 1 951 ; Align 653575 319 342 utg731_pilon exonerate:protein2genome:local gene 646136 647537 1702 + . gene_id 0 ; sequence GL50803_7394-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 646136 646963 . + . utg731_pilon exonerate:protein2genome:local exon 646136 646963 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 646964 646965 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 646964 646994 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 646993 646994 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 646995 647537 . + . utg731_pilon exonerate:protein2genome:local exon 646995 647537 . + . insertions 0 ; deletions 7 utg731_pilon exonerate:protein2genome:local similarity 646136 647537 1702 + . alignment_id 0 ; Query GL50803_7394-t26_1-p1 ; Align 646136 1 828 ; Align 646995 277 6 ; Align 647001 280 30 ; Align 647031 293 141 ; Align 647172 343 366 utg731_pilon exonerate:protein2genome:local gene 645519 645845 496 - . gene_id 0 ; sequence GL50803_7396-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 645519 645845 . - . utg731_pilon exonerate:protein2genome:local exon 645519 645845 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 645519 645845 496 - . alignment_id 0 ; Query GL50803_7396-t26_1-p1 ; Align 645846 5 36 ; Align 645810 19 291 utg731_pilon exonerate:protein2genome:local gene 645031 645438 461 - . gene_id 0 ; sequence GL50803_7397-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 645031 645438 . - . utg731_pilon exonerate:protein2genome:local exon 645031 645438 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 645031 645438 461 - . alignment_id 0 ; Query GL50803_7397-t26_1-p1 ; Align 645439 30 354 ; Align 645082 148 51 utg349_pilon exonerate:protein2genome:local gene 562849 563157 452 + . gene_id 0 ; sequence GL50803_7405-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 562849 563157 . + . utg349_pilon exonerate:protein2genome:local exon 562849 563157 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 562849 563157 452 + . alignment_id 0 ; Query GL50803_7405-t26_1-p1 ; Align 562849 1 309 utg64_pilon exonerate:protein2genome:local gene 531404 531496 123 + . gene_id 0 ; sequence GL50803_7407-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 531404 531496 . + . utg64_pilon exonerate:protein2genome:local exon 531404 531496 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 531404 531496 123 + . alignment_id 0 ; Query GL50803_7407-t26_1-p1 ; Align 531404 1 93 utg64_pilon exonerate:protein2genome:local gene 528569 530337 1954 + . gene_id 0 ; sequence GL50803_7411-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 528569 530337 . + . utg64_pilon exonerate:protein2genome:local exon 528569 530337 . + . insertions 0 ; deletions 7 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 528569 530337 1954 + . alignment_id 0 ; Query GL50803_7411-t26_1-p1 ; Align 528569 1 156 ; Align 528727 53 528 ; Align 529255 230 30 ; Align 529285 243 243 ; Align 529528 327 810 utg64_pilon exonerate:protein2genome:local gene 528026 528472 696 + . gene_id 0 ; sequence GL50803_7413-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 528026 528472 . + . utg64_pilon exonerate:protein2genome:local exon 528026 528472 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 528026 528472 696 + . alignment_id 0 ; Query GL50803_7413-t26_1-p1 ; Align 528026 1 447 utg64_pilon exonerate:protein2genome:local gene 526910 527581 888 + . gene_id 0 ; sequence GL50803_7414-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 526910 527581 . + . utg64_pilon exonerate:protein2genome:local exon 526910 527581 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 526910 527581 888 + . alignment_id 0 ; Query GL50803_7414-t26_1-p1 ; Align 526910 1 672 utg64_pilon exonerate:protein2genome:local gene 525209 526018 1184 + . gene_id 0 ; sequence GL50803_7416-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 525209 526018 . + . utg64_pilon exonerate:protein2genome:local exon 525209 526018 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 525209 526018 1184 + . alignment_id 0 ; Query GL50803_7416-t26_1-p1 ; Align 525209 1 810 utg64_pilon exonerate:protein2genome:local gene 520503 521213 1180 + . gene_id 0 ; sequence GL50803_7421-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 520503 521213 . + . utg64_pilon exonerate:protein2genome:local exon 520503 521213 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 520503 521213 1180 + . alignment_id 0 ; Query GL50803_7421-t26_1-p1 ; Align 520503 1 711 utg64_pilon exonerate:protein2genome:local gene 518564 520426 2118 + . gene_id 0 ; sequence GL50803_7422-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 518564 520426 . + . utg64_pilon exonerate:protein2genome:local exon 518564 520426 . + . insertions 9 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 518564 520426 2118 + . alignment_id 0 ; Query GL50803_7422-t26_1-p1 ; Align 518564 1 249 ; Align 518813 85 282 ; Align 519095 182 153 ; Align 519257 233 1170 utg47_pilon exonerate:protein2genome:local gene 530633 530905 419 - . gene_id 0 ; sequence GL50803_7427-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 530633 530905 . - . utg47_pilon exonerate:protein2genome:local exon 530633 530905 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 530633 530905 419 - . alignment_id 0 ; Query GL50803_7427-t26_1-p1 ; Align 530906 1 273 utg47_pilon exonerate:protein2genome:local gene 522627 522776 162 - . gene_id 0 ; sequence GL50803_7436-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 522627 522776 . - . utg47_pilon exonerate:protein2genome:local exon 522627 522776 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 522627 522776 162 - . alignment_id 0 ; Query GL50803_7436-t26_1-p1 ; Align 522777 1 150 utg47_pilon exonerate:protein2genome:local gene 520196 522151 3196 - . gene_id 0 ; sequence GL50803_7439-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 520196 522151 . - . utg47_pilon exonerate:protein2genome:local exon 520196 522151 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 520196 522151 3196 - . alignment_id 0 ; Query GL50803_7439-t26_1-p1 ; Align 522152 1 1956 utg47_pilon exonerate:protein2genome:local gene 517614 518714 1818 + . gene_id 0 ; sequence GL50803_7444-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 517614 518714 . + . utg47_pilon exonerate:protein2genome:local exon 517614 518714 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 517614 518714 1818 + . alignment_id 0 ; Query GL50803_7444-t26_1-p1 ; Align 517614 1 1101 utg47_pilon exonerate:protein2genome:local gene 1777550 1778527 1523 + . gene_id 0 ; sequence GL50803_7474-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1777550 1778527 . + . utg47_pilon exonerate:protein2genome:local exon 1777550 1778527 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1777550 1778527 1523 + . alignment_id 0 ; Query GL50803_7474-t26_1-p1 ; Align 1777550 1 978 utg731_pilon exonerate:protein2genome:local gene 69973 70566 556 + . gene_id 0 ; sequence GL50803_7505-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 69973 70209 . + . utg731_pilon exonerate:protein2genome:local exon 69973 70209 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local splice5 70210 70211 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 70210 70269 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 70268 70269 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 70270 70566 . + . utg731_pilon exonerate:protein2genome:local exon 70270 70566 . + . insertions 0 ; deletions 0 ; frameshifts 5 utg731_pilon exonerate:protein2genome:local similarity 69973 70566 556 + . alignment_id 0 ; Query GL50803_7505-t26_1-p1 ; Align 69973 1 81 ; Align 70055 28 153 ; Align 70271 80 180 ; Align 70455 140 78 ; Align 70534 166 33 utg64_pilon exonerate:protein2genome:local gene 729556 730128 841 - . gene_id 0 ; sequence GL50803_7511-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 729556 730128 . - . utg64_pilon exonerate:protein2genome:local exon 729556 730128 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 729556 730128 841 - . alignment_id 0 ; Query GL50803_7511-t26_1-p1 ; Align 730129 13 573 utg64_pilon exonerate:protein2genome:local gene 730145 730732 806 + . gene_id 0 ; sequence GL50803_7512-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 730145 730732 . + . utg64_pilon exonerate:protein2genome:local exon 730145 730732 . + . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 730145 730732 806 + . alignment_id 0 ; Query GL50803_7512-t26_1-p1 ; Align 730145 1 258 ; Align 730403 89 330 utg64_pilon exonerate:protein2genome:local gene 730765 731209 571 - . gene_id 0 ; sequence GL50803_7513-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 730765 731209 . - . utg64_pilon exonerate:protein2genome:local exon 730765 731209 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 730765 731209 571 - . alignment_id 0 ; Query GL50803_7513-t26_1-p1 ; Align 731210 1 159 ; Align 731050 54 285 utg64_pilon exonerate:protein2genome:local gene 731376 733405 2897 + . gene_id 0 ; sequence GL50803_7514-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 731376 733405 . + . utg64_pilon exonerate:protein2genome:local exon 731376 733405 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 731376 733405 2897 + . alignment_id 0 ; Query GL50803_7514-t26_1-p1 ; Align 731376 1 282 ; Align 731660 95 3 ; Align 731663 97 708 ; Align 732371 334 1035 utg64_pilon exonerate:protein2genome:local gene 735953 737762 2302 - . gene_id 0 ; sequence GL50803_7517-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 735953 737762 . - . utg64_pilon exonerate:protein2genome:local exon 735953 737762 . - . insertions 0 ; deletions 3 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 735953 737762 2302 - . alignment_id 0 ; Query GL50803_7517-t26_1-p1 ; Align 737763 1 1170 ; Align 736592 391 369 ; Align 736223 517 270 utg64_pilon exonerate:protein2genome:local gene 738454 739899 2025 + . gene_id 0 ; sequence GL50803_7520-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 738454 739899 . + . utg64_pilon exonerate:protein2genome:local exon 738454 739899 . + . insertions 0 ; deletions 1 ; frameshifts 3 utg64_pilon exonerate:protein2genome:local similarity 738454 739899 2025 + . alignment_id 0 ; Query GL50803_7520-t26_1-p1 ; Align 738454 1 297 ; Align 738753 100 3 ; Align 738756 102 360 ; Align 739117 222 783 utg64_pilon exonerate:protein2genome:local gene 739937 740421 571 - . gene_id 0 ; sequence GL50803_7521-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 739937 740421 . - . utg64_pilon exonerate:protein2genome:local exon 739937 740421 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 739937 740421 571 - . alignment_id 0 ; Query GL50803_7521-t26_1-p1 ; Align 740422 1 36 ; Align 740384 13 447 utg64_pilon exonerate:protein2genome:local gene 740471 741701 2028 - . gene_id 0 ; sequence GL50803_7522-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 740471 741701 . - . utg64_pilon exonerate:protein2genome:local exon 740471 741701 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 740471 741701 2028 - . alignment_id 0 ; Query GL50803_7522-t26_1-p1 ; Align 741702 1 771 ; Align 740930 258 459 utg64_pilon exonerate:protein2genome:local gene 743698 744402 1055 + . gene_id 0 ; sequence GL50803_7524-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 743698 744402 . + . utg64_pilon exonerate:protein2genome:local exon 743698 744402 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 743698 744402 1055 + . alignment_id 0 ; Query GL50803_7524-t26_1-p1 ; Align 743698 1 705 utg18_pilon exonerate:protein2genome:local gene 161165 163129 3297 - . gene_id 0 ; sequence GL50803_7532-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 161165 163129 . - . utg18_pilon exonerate:protein2genome:local exon 161165 163129 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 161165 163129 3297 - . alignment_id 0 ; Query GL50803_7532-t26_1-p1 ; Align 163130 1 1965 utg18_pilon exonerate:protein2genome:local gene 163237 164574 1996 + . gene_id 0 ; sequence GL50803_7533-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 163237 164574 . + . utg18_pilon exonerate:protein2genome:local exon 163237 164574 . + . insertions 6 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 163237 164574 1996 + . alignment_id 0 ; Query GL50803_7533-t26_1-p1 ; Align 163237 1 714 ; Align 163951 240 15 ; Align 163966 246 534 ; Align 164506 424 69 utg18_pilon exonerate:protein2genome:local gene 164608 165627 1549 - . gene_id 0 ; sequence GL50803_7534-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 164608 165627 . - . utg18_pilon exonerate:protein2genome:local exon 164608 165627 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 164608 165627 1549 - . alignment_id 0 ; Query GL50803_7534-t26_1-p1 ; Align 165628 3 1020 utg18_pilon exonerate:protein2genome:local gene 169204 170407 2079 + . gene_id 0 ; sequence GL50803_7537-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 169204 170407 . + . utg18_pilon exonerate:protein2genome:local exon 169204 170407 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg18_pilon exonerate:protein2genome:local similarity 169204 170407 2079 + . alignment_id 0 ; Query GL50803_7537-t26_1-p1 ; Align 169204 1 954 ; Align 170159 319 249 utg18_pilon exonerate:protein2genome:local gene 170509 170817 459 + . gene_id 0 ; sequence GL50803_7538-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 170509 170817 . + . utg18_pilon exonerate:protein2genome:local exon 170509 170817 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 170509 170817 459 + . alignment_id 0 ; Query GL50803_7538-t26_1-p1 ; Align 170509 1 309 utg18_pilon exonerate:protein2genome:local gene 249071 249154 122 - . gene_id 0 ; sequence GL50803_7545-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 249071 249154 . - . utg18_pilon exonerate:protein2genome:local exon 249071 249154 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 249071 249154 122 - . alignment_id 0 ; Query GL50803_7545-t26_1-p1 ; Align 249155 14 84 utg265_pilon exonerate:protein2genome:local gene 89443 90459 1106 - . gene_id 0 ; sequence GL50803_7552-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 89443 90459 . - . utg265_pilon exonerate:protein2genome:local exon 89443 90459 . - . insertions 36 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 89443 90459 1106 - . alignment_id 0 ; Query GL50803_7552-t26_1-p1 ; Align 90460 5 36 ; Align 90415 17 60 ; Align 90343 37 63 ; Align 90265 58 165 ; Align 90100 116 657 utg265_pilon exonerate:protein2genome:local gene 83460 85754 2357 - . gene_id 0 ; sequence GL50803_7555-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 85130 85754 . - . utg265_pilon exonerate:protein2genome:local exon 85130 85754 . - . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 85128 85129 . - . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 85082 85129 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 85082 85083 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 83460 85081 . - . utg265_pilon exonerate:protein2genome:local exon 83460 85081 . - . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 83460 85754 2357 - . alignment_id 0 ; Query GL50803_7555-t26_1-p1 ; Align 85755 131 606 ; Align 85146 333 15 ; Align 85080 339 774 ; Align 84306 599 657 ; Align 83649 819 189 utg265_pilon exonerate:protein2genome:local gene 82242 83441 1755 - . gene_id 0 ; sequence GL50803_7556-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 82242 83441 . - . utg265_pilon exonerate:protein2genome:local exon 82242 83441 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 82242 83441 1755 - . alignment_id 0 ; Query GL50803_7556-t26_1-p1 ; Align 83442 1 1200 utg265_pilon exonerate:protein2genome:local gene 79987 81177 1426 + . gene_id 0 ; sequence GL50803_7559-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 79987 81177 . + . utg265_pilon exonerate:protein2genome:local exon 79987 81177 . + . insertions 0 ; deletions 5 utg265_pilon exonerate:protein2genome:local similarity 79987 81177 1426 + . alignment_id 0 ; Query GL50803_7559-t26_1-p1 ; Align 79987 1 795 ; Align 80782 271 396 utg265_pilon exonerate:protein2genome:local gene 78719 79222 789 + . gene_id 0 ; sequence GL50803_7562-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 78719 79222 . + . utg265_pilon exonerate:protein2genome:local exon 78719 79222 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 78719 79222 789 + . alignment_id 0 ; Query GL50803_7562-t26_1-p1 ; Align 78719 1 504 utg349_pilon exonerate:protein2genome:local gene 1321408 1322205 1198 + . gene_id 0 ; sequence GL50803_7566-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1321408 1322205 . + . utg349_pilon exonerate:protein2genome:local exon 1321408 1322205 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1321408 1322205 1198 + . alignment_id 0 ; Query GL50803_7566-t26_1-p1 ; Align 1321408 16 798 utg349_pilon exonerate:protein2genome:local gene 1324022 1324594 979 - . gene_id 0 ; sequence GL50803_7569-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1324022 1324594 . - . utg349_pilon exonerate:protein2genome:local exon 1324022 1324594 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1324022 1324594 979 - . alignment_id 0 ; Query GL50803_7569-t26_1-p1 ; Align 1324595 1 573 utg349_pilon exonerate:protein2genome:local gene 1324613 1330012 7815 + . gene_id 0 ; sequence GL50803_7570-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1324613 1330012 . + . utg349_pilon exonerate:protein2genome:local exon 1324613 1330012 . + . insertions 9 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 1324613 1330012 7815 + . alignment_id 0 ; Query GL50803_7570-t26_1-p1 ; Align 1324613 1 3300 ; Align 1327916 1101 918 ; Align 1328834 1410 249 ; Align 1329089 1493 516 ; Align 1329605 1666 408 utg349_pilon exonerate:protein2genome:local gene 1330760 1332959 2783 + . gene_id 0 ; sequence GL50803_7573-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1330760 1332959 . + . utg349_pilon exonerate:protein2genome:local exon 1330760 1332959 . + . insertions 0 ; deletions 5 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 1330760 1332959 2783 + . alignment_id 0 ; Query GL50803_7573-t26_1-p1 ; Align 1330760 10 1449 ; Align 1332209 494 120 ; Align 1332329 535 324 ; Align 1332653 645 90 ; Align 1332743 676 132 ; Align 1332876 720 84 utg47_pilon exonerate:protein2genome:local gene 381275 382664 1895 + . gene_id 0 ; sequence GL50803_7577-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 381275 382664 . + . utg47_pilon exonerate:protein2genome:local exon 381275 382664 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 381275 382664 1895 + . alignment_id 0 ; Query GL50803_7577-t26_1-p1 ; Align 381275 1 51 ; Align 381327 18 1176 ; Align 382503 411 162 utg47_pilon exonerate:protein2genome:local gene 380693 381202 854 - . gene_id 0 ; sequence GL50803_7578-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 380693 381202 . - . utg47_pilon exonerate:protein2genome:local exon 380693 381202 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 380693 381202 854 - . alignment_id 0 ; Query GL50803_7578-t26_1-p1 ; Align 381203 1 510 utg47_pilon exonerate:protein2genome:local gene 379755 380652 1208 + . gene_id 0 ; sequence GL50803_7579-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 379755 380652 . + . utg47_pilon exonerate:protein2genome:local exon 379755 380652 . + . insertions 0 ; deletions 2 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 379755 380652 1208 + . alignment_id 0 ; Query GL50803_7579-t26_1-p1 ; Align 379755 1 75 ; Align 379832 27 102 ; Align 379936 62 717 utg47_pilon exonerate:protein2genome:local gene 371516 371602 125 + . gene_id 0 ; sequence GL50803_7586-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 371516 371602 . + . utg47_pilon exonerate:protein2genome:local exon 371516 371602 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 371516 371602 125 + . alignment_id 0 ; Query GL50803_7586-t26_1-p1 ; Align 371516 1 87 utg47_pilon exonerate:protein2genome:local gene 369825 371075 2195 + . gene_id 0 ; sequence GL50803_7588-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 369825 371075 . + . utg47_pilon exonerate:protein2genome:local exon 369825 371075 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 369825 371075 2195 + . alignment_id 0 ; Query GL50803_7588-t26_1-p1 ; Align 369825 1 774 ; Align 370599 260 477 utg47_pilon exonerate:protein2genome:local gene 366616 367374 975 - . gene_id 0 ; sequence GL50803_7590-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 366616 367374 . - . utg47_pilon exonerate:protein2genome:local exon 366616 367374 . - . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 366616 367374 975 - . alignment_id 0 ; Query GL50803_7590-t26_1-p1 ; Align 367375 1 255 ; Align 367120 90 504 utg308_pilon exonerate:protein2genome:local gene 374152 375054 1456 + . gene_id 0 ; sequence GL50803_7593-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 374152 375054 . + . utg308_pilon exonerate:protein2genome:local exon 374152 375054 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 374152 375054 1456 + . alignment_id 0 ; Query GL50803_7593-t26_1-p1 ; Align 374152 1 903 utg308_pilon exonerate:protein2genome:local gene 365921 367447 1547 - . gene_id 0 ; sequence GL50803_7597-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 365921 367447 . - . utg308_pilon exonerate:protein2genome:local exon 365921 367447 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 365921 367447 1547 - . alignment_id 0 ; Query GL50803_7597-t26_1-p1 ; Align 367448 1 1527 utg308_pilon exonerate:protein2genome:local gene 365308 365893 886 - . gene_id 0 ; sequence GL50803_7598-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 365308 365893 . - . utg308_pilon exonerate:protein2genome:local exon 365308 365893 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg308_pilon exonerate:protein2genome:local similarity 365308 365893 886 - . alignment_id 0 ; Query GL50803_7598-t26_1-p1 ; Align 365894 1 33 ; Align 365860 12 552 utg308_pilon exonerate:protein2genome:local gene 363372 365294 2072 + . gene_id 0 ; sequence GL50803_7599-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 363372 365294 . + . utg308_pilon exonerate:protein2genome:local exon 363372 365294 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 363372 365294 2072 + . alignment_id 0 ; Query GL50803_7599-t26_1-p1 ; Align 363372 1 1923 utg308_pilon exonerate:protein2genome:local gene 361806 363314 1416 + . gene_id 0 ; sequence GL50803_7600-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 361806 363314 . + . utg308_pilon exonerate:protein2genome:local exon 361806 363314 . + . insertions 9 ; deletions 4 utg308_pilon exonerate:protein2genome:local similarity 361806 363314 1416 + . alignment_id 0 ; Query GL50803_7600-t26_1-p1 ; Align 361806 7 696 ; Align 362511 239 570 ; Align 363081 433 234 utg11_pilon exonerate:protein2genome:local gene 664187 667237 3146 + . gene_id 0 ; sequence GL50803_7608-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 664187 667237 . + . utg11_pilon exonerate:protein2genome:local exon 664187 667237 . + . insertions 18 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 664187 667237 3146 + . alignment_id 0 ; Query GL50803_7608-t26_1-p1 ; Align 664187 1 789 ; Align 664988 264 42 ; Align 665033 278 1119 ; Align 666155 651 30 ; Align 666185 663 1053 utg11_pilon exonerate:protein2genome:local gene 668786 670039 1913 + . gene_id 0 ; sequence GL50803_7610-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 668786 670039 . + . utg11_pilon exonerate:protein2genome:local exon 668786 670039 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 668786 670039 1913 + . alignment_id 0 ; Query GL50803_7610-t26_1-p1 ; Align 668786 1 1254 utg11_pilon exonerate:protein2genome:local gene 670123 670329 316 - . gene_id 0 ; sequence GL50803_7611-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 670123 670329 . - . utg11_pilon exonerate:protein2genome:local exon 670123 670329 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 670123 670329 316 - . alignment_id 0 ; Query GL50803_7611-t26_1-p1 ; Align 670330 1 207 utg11_pilon exonerate:protein2genome:local gene 671736 673229 1840 - . gene_id 0 ; sequence GL50803_7615-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 671736 673229 . - . utg11_pilon exonerate:protein2genome:local exon 671736 673229 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 671736 673229 1840 - . alignment_id 0 ; Query GL50803_7615-t26_1-p1 ; Align 673230 396 735 ; Align 672495 642 759 utg11_pilon exonerate:protein2genome:local gene 674847 677571 3507 + . gene_id 0 ; sequence GL50803_7616-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 674847 677571 . + . utg11_pilon exonerate:protein2genome:local exon 674847 677571 . + . insertions 0 ; deletions 8 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 674847 677571 3507 + . alignment_id 0 ; Query GL50803_7616-t26_1-p1 ; Align 674847 1 1476 ; Align 676323 496 33 ; Align 676356 511 114 ; Align 676470 550 444 ; Align 676915 698 657 utg308_pilon exonerate:protein2genome:local gene 793413 793850 614 + . gene_id 0 ; sequence GL50803_7620-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 793413 793850 . + . utg308_pilon exonerate:protein2genome:local exon 793413 793850 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 793413 793850 614 + . alignment_id 0 ; Query GL50803_7620-t26_1-p1 ; Align 793413 1 438 utg731_pilon exonerate:protein2genome:local gene 578216 578413 175 + . gene_id 0 ; sequence GL50803_7629-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 578216 578413 . + . utg731_pilon exonerate:protein2genome:local exon 578216 578413 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 578216 578413 175 + . alignment_id 0 ; Query GL50803_7629-t26_1-p1 ; Align 578216 1 198 utg731_pilon exonerate:protein2genome:local gene 570114 570311 175 - . gene_id 0 ; sequence GL50803_7629-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 570114 570311 . - . utg731_pilon exonerate:protein2genome:local exon 570114 570311 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 570114 570311 175 - . alignment_id 0 ; Query GL50803_7629-t26_1-p1 ; Align 570312 1 198 utg265_pilon exonerate:protein2genome:local gene 241035 241130 107 + . gene_id 0 ; sequence GL50803_7634-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 241035 241130 . + . utg265_pilon exonerate:protein2genome:local exon 241035 241130 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 241035 241130 107 + . alignment_id 0 ; Query GL50803_7634-t26_1-p1 ; Align 241035 88 96 utg265_pilon exonerate:protein2genome:local gene 337389 337484 107 - . gene_id 0 ; sequence GL50803_7634-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 337389 337484 . - . utg265_pilon exonerate:protein2genome:local exon 337389 337484 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 337389 337484 107 - . alignment_id 0 ; Query GL50803_7634-t26_1-p1 ; Align 337485 88 96 utg308_pilon exonerate:protein2genome:local gene 802157 803017 1363 - . gene_id 0 ; sequence GL50803_7639-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 802157 803017 . - . utg308_pilon exonerate:protein2genome:local exon 802157 803017 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 802157 803017 1363 - . alignment_id 0 ; Query GL50803_7639-t26_1-p1 ; Align 803018 1 861 utg99_pilon exonerate:protein2genome:local gene 287032 290937 4887 - . gene_id 0 ; sequence GL50803_7648-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 287032 290937 . - . utg99_pilon exonerate:protein2genome:local exon 287032 290937 . - . insertions 0 ; deletions 3 utg99_pilon exonerate:protein2genome:local similarity 287032 290937 4887 - . alignment_id 0 ; Query GL50803_7648-t26_1-p1 ; Align 290938 1 2820 ; Align 288118 943 693 ; Align 287425 1175 393 utg99_pilon exonerate:protein2genome:local gene 284660 286141 2230 - . gene_id 0 ; sequence GL50803_7649-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 284660 286141 . - . utg99_pilon exonerate:protein2genome:local exon 284660 286141 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 284660 286141 2230 - . alignment_id 0 ; Query GL50803_7649-t26_1-p1 ; Align 286142 317 1482 utg99_pilon exonerate:protein2genome:local gene 282162 284528 2719 - . gene_id 0 ; sequence GL50803_7651-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 282162 284528 . - . utg99_pilon exonerate:protein2genome:local exon 282162 284528 . - . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 282162 284528 2719 - . alignment_id 0 ; Query GL50803_7651-t26_1-p1 ; Align 284529 1 1236 ; Align 283293 414 1131 utg99_pilon exonerate:protein2genome:local gene 280928 282076 1724 + . gene_id 0 ; sequence GL50803_7652-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 280928 282076 . + . utg99_pilon exonerate:protein2genome:local exon 280928 282076 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 280928 282076 1724 + . alignment_id 0 ; Query GL50803_7652-t26_1-p1 ; Align 280928 1 1149 utg99_pilon exonerate:protein2genome:local gene 278965 280860 2722 + . gene_id 0 ; sequence GL50803_7653-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 278965 280860 . + . utg99_pilon exonerate:protein2genome:local exon 278965 280860 . + . insertions 0 ; deletions 2 utg99_pilon exonerate:protein2genome:local similarity 278965 280860 2722 + . alignment_id 0 ; Query GL50803_7653-t26_1-p1 ; Align 278965 1 906 ; Align 279871 305 990 utg99_pilon exonerate:protein2genome:local gene 274494 275812 1752 + . gene_id 0 ; sequence GL50803_7655-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 274494 275812 . + . utg99_pilon exonerate:protein2genome:local exon 274494 275812 . + . insertions 3 ; deletions 0 ; frameshifts 5 utg99_pilon exonerate:protein2genome:local similarity 274494 275812 1752 + . alignment_id 0 ; Query GL50803_7655-t26_1-p1 ; Align 274494 1 36 ; Align 274533 13 6 ; Align 274544 15 1269 utg349_pilon exonerate:protein2genome:local gene 982973 986585 4741 + . gene_id 0 ; sequence GL50803_7661-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 982973 983672 . + . utg349_pilon exonerate:protein2genome:local exon 982973 983672 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 983673 983674 . + . intron_id 1 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local intron 983673 983702 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 983701 983702 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 983703 986585 . + . utg349_pilon exonerate:protein2genome:local exon 983703 986585 . + . insertions 6 ; deletions 1 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 982973 986585 4741 + . alignment_id 0 ; Query GL50803_7661-t26_1-p1 ; Align 982973 256 699 ; Align 983705 490 18 ; Align 983723 497 594 ; Align 984320 695 102 ; Align 984425 729 1974 ; Align 986400 1387 186 utg349_pilon exonerate:protein2genome:local gene 980206 982230 3301 + . gene_id 0 ; sequence GL50803_7662-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 980206 982230 . + . utg349_pilon exonerate:protein2genome:local exon 980206 982230 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 980206 982230 3301 + . alignment_id 0 ; Query GL50803_7662-t26_1-p1 ; Align 980206 1 1059 ; Align 981268 354 963 utg349_pilon exonerate:protein2genome:local gene 978558 980096 2210 + . gene_id 0 ; sequence GL50803_7663-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 978558 980096 . + . utg349_pilon exonerate:protein2genome:local exon 978558 980096 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 978558 980096 2210 + . alignment_id 0 ; Query GL50803_7663-t26_1-p1 ; Align 978558 1 1539 utg349_pilon exonerate:protein2genome:local gene 977503 978459 1548 + . gene_id 0 ; sequence GL50803_7664-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 977503 978459 . + . utg349_pilon exonerate:protein2genome:local exon 977503 978459 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 977503 978459 1548 + . alignment_id 0 ; Query GL50803_7664-t26_1-p1 ; Align 977503 1 957 utg11_pilon exonerate:protein2genome:local gene 1395899 1396645 773 + . gene_id 0 ; sequence GL50803_7677-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1395899 1396645 . + . utg11_pilon exonerate:protein2genome:local exon 1395899 1396645 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1395899 1396645 773 + . alignment_id 0 ; Query GL50803_7677-t26_1-p1 ; Align 1395899 3 747 utg11_pilon exonerate:protein2genome:local gene 1399674 1540528 1598 - . gene_id 0 ; sequence GL50803_7679-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1540501 1540528 . - . utg11_pilon exonerate:protein2genome:local exon 1540501 1540528 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1540499 1540500 . - . intron_id 1 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 1400855 1540500 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1400855 1400856 . - . intron_id 0 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 1399674 1400854 . - . utg11_pilon exonerate:protein2genome:local exon 1399674 1400854 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1399674 1540528 1598 - . alignment_id 0 ; Query GL50803_7679-t26_1-p1 ; Align 1540529 319 27 ; Align 1400853 329 1179 utg11_pilon exonerate:protein2genome:local gene 1401907 1403931 2406 + . gene_id 0 ; sequence GL50803_7680-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1401907 1402852 . + . utg11_pilon exonerate:protein2genome:local exon 1401907 1402852 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 1402853 1402854 . + . intron_id 1 ; splice_site "TA" utg11_pilon exonerate:protein2genome:local intron 1402853 1402894 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1402893 1402894 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 1402895 1403931 . + . utg11_pilon exonerate:protein2genome:local exon 1402895 1403931 . + . insertions 3 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1401907 1403931 2406 + . alignment_id 0 ; Query GL50803_7680-t26_1-p1 ; Align 1401907 1 648 ; Align 1402555 218 297 ; Align 1402897 318 147 ; Align 1403044 369 222 ; Align 1403269 443 663 utg265_pilon exonerate:protein2genome:local gene 802324 802992 931 + . gene_id 0 ; sequence GL50803_7685-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 802324 802992 . + . utg265_pilon exonerate:protein2genome:local exon 802324 802992 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 802324 802992 931 + . alignment_id 0 ; Query GL50803_7685-t26_1-p1 ; Align 802324 1 669 utg99_pilon exonerate:protein2genome:local gene 489280 489927 976 + . gene_id 0 ; sequence GL50803_7696-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 489280 489927 . + . utg99_pilon exonerate:protein2genome:local exon 489280 489927 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 489280 489927 976 + . alignment_id 0 ; Query GL50803_7696-t26_1-p1 ; Align 489280 1 648 utg99_pilon exonerate:protein2genome:local gene 538704 540926 2847 - . gene_id 0 ; sequence GL50803_7706-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 538704 540926 . - . utg99_pilon exonerate:protein2genome:local exon 538704 540926 . - . insertions 3 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 538704 540926 2847 - . alignment_id 0 ; Query GL50803_7706-t26_1-p1 ; Align 540927 1 1062 ; Align 539865 356 270 ; Align 539592 446 888 utg731_pilon exonerate:protein2genome:local gene 746157 748319 2749 - . gene_id 0 ; sequence GL50803_7710-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 746157 748319 . - . utg731_pilon exonerate:protein2genome:local exon 746157 748319 . - . insertions 0 ; deletions 6 utg731_pilon exonerate:protein2genome:local similarity 746157 748319 2749 - . alignment_id 0 ; Query GL50803_7710-t26_1-p1 ; Align 748320 1 684 ; Align 747636 230 201 ; Align 747435 299 102 ; Align 747333 336 1176 utg731_pilon exonerate:protein2genome:local gene 741467 743521 2633 - . gene_id 0 ; sequence GL50803_7715-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 741467 743521 . - . utg731_pilon exonerate:protein2genome:local exon 741467 743521 . - . insertions 18 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 741467 743521 2633 - . alignment_id 0 ; Query GL50803_7715-t26_1-p1 ; Align 743522 1 549 ; Align 742964 184 921 ; Align 742040 491 420 ; Align 741620 634 75 ; Align 741539 659 72 utg731_pilon exonerate:protein2genome:local gene 740923 741219 507 - . gene_id 0 ; sequence GL50803_7717-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 740923 741219 . - . utg731_pilon exonerate:protein2genome:local exon 740923 741219 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 740923 741219 507 - . alignment_id 0 ; Query GL50803_7717-t26_1-p1 ; Align 741220 1 297 utg731_pilon exonerate:protein2genome:local gene 740179 740904 1064 + . gene_id 0 ; sequence GL50803_7718-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 740179 740904 . + . utg731_pilon exonerate:protein2genome:local exon 740179 740904 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 740179 740904 1064 + . alignment_id 0 ; Query GL50803_7718-t26_1-p1 ; Align 740179 1 726 utg731_pilon exonerate:protein2genome:local gene 739509 740168 835 - . gene_id 0 ; sequence GL50803_7719-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 739509 740168 . - . utg731_pilon exonerate:protein2genome:local exon 739509 740168 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 739509 740168 835 - . alignment_id 0 ; Query GL50803_7719-t26_1-p1 ; Align 740169 6 660 utg731_pilon exonerate:protein2genome:local gene 735963 739283 4106 - . gene_id 0 ; sequence GL50803_7721-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 735963 739283 . - . utg731_pilon exonerate:protein2genome:local exon 735963 739283 . - . insertions 24 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 735963 739283 4106 - . alignment_id 0 ; Query GL50803_7721-t26_1-p1 ; Align 739284 1 1221 ; Align 738063 410 1020 ; Align 737028 750 36 ; Align 736983 762 1020 utg731_pilon exonerate:protein2genome:local gene 731970 734030 1427 - . gene_id 0 ; sequence GL50803_7723-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 733983 734030 . - . utg731_pilon exonerate:protein2genome:local exon 733983 734030 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 733981 733982 . - . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 733026 733982 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 733026 733027 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 731970 733025 . - . utg731_pilon exonerate:protein2genome:local exon 731970 733025 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 731970 734030 1427 - . alignment_id 0 ; Query GL50803_7723-t26_1-p1 ; Align 734031 333 48 ; Align 733026 349 48 ; Align 732978 367 1008 utg47_pilon exonerate:protein2genome:local gene 815385 815522 149 + . gene_id 0 ; sequence GL50803_7726-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 815385 815522 . + . utg47_pilon exonerate:protein2genome:local exon 815385 815522 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 815385 815522 149 + . alignment_id 0 ; Query GL50803_7726-t26_1-p1 ; Align 815385 4 138 utg47_pilon exonerate:protein2genome:local gene 816149 818229 2727 + . gene_id 0 ; sequence GL50803_7728-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 816149 818229 . + . utg47_pilon exonerate:protein2genome:local exon 816149 818229 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 816149 818229 2727 + . alignment_id 0 ; Query GL50803_7728-t26_1-p1 ; Align 816149 1 2004 ; Align 818155 670 75 utg731_pilon exonerate:protein2genome:local gene 473928 474215 105 - . gene_id 0 ; sequence GL50803_7739-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 473928 474215 . - . utg731_pilon exonerate:protein2genome:local exon 473928 474215 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 473928 474215 105 - . alignment_id 0 ; Query GL50803_7739-t26_1-p1 ; Align 474216 44 180 ; Align 474033 104 105 utg64_pilon exonerate:protein2genome:local gene 108957 113942 7276 - . gene_id 0 ; sequence GL50803_7747-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 108957 113942 . - . utg64_pilon exonerate:protein2genome:local exon 108957 113942 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 108957 113942 7276 - . alignment_id 0 ; Query GL50803_7747-t26_1-p1 ; Align 113943 1 4536 ; Align 109404 1513 447 utg64_pilon exonerate:protein2genome:local gene 113969 116122 2878 - . gene_id 0 ; sequence GL50803_7748-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 113969 116122 . - . utg64_pilon exonerate:protein2genome:local exon 113969 116122 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 113969 116122 2878 - . alignment_id 0 ; Query GL50803_7748-t26_1-p1 ; Align 116123 1 1266 ; Align 114854 423 885 utg64_pilon exonerate:protein2genome:local gene 117251 120453 4457 - . gene_id 0 ; sequence GL50803_7751-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 117251 120453 . - . utg64_pilon exonerate:protein2genome:local exon 117251 120453 . - . insertions 0 ; deletions 2 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 117251 120453 4457 - . alignment_id 0 ; Query GL50803_7751-t26_1-p1 ; Align 120454 1 1782 ; Align 118672 596 1023 ; Align 117649 938 3 ; Align 117644 939 393 utg212_pilon exonerate:protein2genome:local gene 460721 461023 489 - . gene_id 0 ; sequence GL50803_7760-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 460721 461023 . - . utg212_pilon exonerate:protein2genome:local exon 460721 461023 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 460721 461023 489 - . alignment_id 0 ; Query GL50803_7760-t26_1-p1 ; Align 461024 1 303 utg212_pilon exonerate:protein2genome:local gene 450820 451407 737 + . gene_id 0 ; sequence GL50803_7765-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 450820 451407 . + . utg212_pilon exonerate:protein2genome:local exon 450820 451407 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 450820 451407 737 + . alignment_id 0 ; Query GL50803_7765-t26_1-p1 ; Align 450820 1 588 utg212_pilon exonerate:protein2genome:local gene 449783 450513 1188 - . gene_id 0 ; sequence GL50803_7766-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 449783 450513 . - . utg212_pilon exonerate:protein2genome:local exon 449783 450513 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 449783 450513 1188 - . alignment_id 0 ; Query GL50803_7766-t26_1-p1 ; Align 450514 1 495 ; Align 450017 167 234 utg212_pilon exonerate:protein2genome:local gene 148252 149052 1244 + . gene_id 0 ; sequence GL50803_7778-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 148252 149052 . + . utg212_pilon exonerate:protein2genome:local exon 148252 149052 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 148252 149052 1244 + . alignment_id 0 ; Query GL50803_7778-t26_1-p1 ; Align 148252 1 801 utg212_pilon exonerate:protein2genome:local gene 139266 139838 990 - . gene_id 0 ; sequence GL50803_7789-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 139266 139838 . - . utg212_pilon exonerate:protein2genome:local exon 139266 139838 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 139266 139838 990 - . alignment_id 0 ; Query GL50803_7789-t26_1-p1 ; Align 139839 1 573 utg212_pilon exonerate:protein2genome:local gene 138677 139142 540 + . gene_id 0 ; sequence GL50803_7790-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 138677 139142 . + . utg212_pilon exonerate:protein2genome:local exon 138677 139142 . + . insertions 3 ; deletions 0 ; frameshifts 4 utg212_pilon exonerate:protein2genome:local similarity 138677 139142 540 + . alignment_id 0 ; Query GL50803_7790-t26_1-p1 ; Align 138677 1 303 ; Align 138987 102 156 utg212_pilon exonerate:protein2genome:local gene 134577 138626 5548 - . gene_id 0 ; sequence GL50803_7791-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 134577 138626 . - . utg212_pilon exonerate:protein2genome:local exon 134577 138626 . - . insertions 24 ; deletions 4 utg212_pilon exonerate:protein2genome:local similarity 134577 138626 5548 - . alignment_id 0 ; Query GL50803_7791-t26_1-p1 ; Align 138627 1 27 ; Align 138597 10 216 ; Align 138378 82 924 ; Align 137442 390 72 ; Align 137370 416 513 ; Align 136854 587 228 ; Align 136623 663 1380 ; Align 135243 1125 666 utg212_pilon exonerate:protein2genome:local gene 133859 134542 1024 - . gene_id 0 ; sequence GL50803_7792-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 133859 134542 . - . utg212_pilon exonerate:protein2genome:local exon 133859 134542 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 133859 134542 1024 - . alignment_id 0 ; Query GL50803_7792-t26_1-p1 ; Align 134543 1 684 utg18_pilon exonerate:protein2genome:local gene 356787 357674 1494 - . gene_id 0 ; sequence GL50803_7796-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 356787 357674 . - . utg18_pilon exonerate:protein2genome:local exon 356787 357674 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 356787 357674 1494 - . alignment_id 0 ; Query GL50803_7796-t26_1-p1 ; Align 357675 1 888 utg18_pilon exonerate:protein2genome:local gene 357752 358657 1492 - . gene_id 0 ; sequence GL50803_7797-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 357752 358657 . - . utg18_pilon exonerate:protein2genome:local exon 357752 358657 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 357752 358657 1492 - . alignment_id 0 ; Query GL50803_7797-t26_1-p1 ; Align 358658 1 906 utg18_pilon exonerate:protein2genome:local gene 359840 360727 1523 - . gene_id 0 ; sequence GL50803_7799-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 359840 360727 . - . utg18_pilon exonerate:protein2genome:local exon 359840 360727 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 359840 360727 1523 - . alignment_id 0 ; Query GL50803_7799-t26_1-p1 ; Align 360728 1 888 utg18_pilon exonerate:protein2genome:local gene 360730 361677 1243 - . gene_id 0 ; sequence GL50803_7800-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 360730 361677 . - . utg18_pilon exonerate:protein2genome:local exon 360730 361677 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 360730 361677 1243 - . alignment_id 0 ; Query GL50803_7800-t26_1-p1 ; Align 361678 1 948 utg18_pilon exonerate:protein2genome:local gene 364395 366068 2556 + . gene_id 0 ; sequence GL50803_7807-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 364395 366068 . + . utg18_pilon exonerate:protein2genome:local exon 364395 366068 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 364395 366068 2556 + . alignment_id 0 ; Query GL50803_7807-t26_1-p1 ; Align 364395 1 1674 utg64_pilon exonerate:protein2genome:local gene 877758 878354 917 - . gene_id 0 ; sequence GL50803_7825-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 877758 878354 . - . utg64_pilon exonerate:protein2genome:local exon 877758 878354 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 877758 878354 917 - . alignment_id 0 ; Query GL50803_7825-t26_1-p1 ; Align 878355 1 597 utg64_pilon exonerate:protein2genome:local gene 873054 874721 2321 + . gene_id 0 ; sequence GL50803_7829-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 873054 874721 . + . utg64_pilon exonerate:protein2genome:local exon 873054 874721 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 873054 874721 2321 + . alignment_id 0 ; Query GL50803_7829-t26_1-p1 ; Align 873054 1 1668 utg64_pilon exonerate:protein2genome:local gene 867599 868909 1655 + . gene_id 0 ; sequence GL50803_7831-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 867599 868909 . + . utg64_pilon exonerate:protein2genome:local exon 867599 868909 . + . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 867599 868909 1655 + . alignment_id 0 ; Query GL50803_7831-t26_1-p1 ; Align 867599 1 546 ; Align 868145 185 765 utg11_pilon exonerate:protein2genome:local gene 896706 897299 877 + . gene_id 0 ; sequence GL50803_7843-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 896706 897299 . + . utg11_pilon exonerate:protein2genome:local exon 896706 897299 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 896706 897299 877 + . alignment_id 0 ; Query GL50803_7843-t26_1-p1 ; Align 896706 1 594 utg11_pilon exonerate:protein2genome:local gene 889915 890418 731 + . gene_id 0 ; sequence GL50803_7850-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 889915 890418 . + . utg11_pilon exonerate:protein2genome:local exon 889915 890418 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 889915 890418 731 + . alignment_id 0 ; Query GL50803_7850-t26_1-p1 ; Align 889915 1 504 utg11_pilon exonerate:protein2genome:local gene 889221 889859 884 - . gene_id 0 ; sequence GL50803_7851-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 889221 889859 . - . utg11_pilon exonerate:protein2genome:local exon 889221 889859 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 889221 889859 884 - . alignment_id 0 ; Query GL50803_7851-t26_1-p1 ; Align 889860 1 639 utg11_pilon exonerate:protein2genome:local gene 242417 242590 112 + . gene_id 0 ; sequence GL50803_7861-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 242417 242590 . + . utg11_pilon exonerate:protein2genome:local exon 242417 242590 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 242417 242590 112 + . alignment_id 0 ; Query GL50803_7861-t26_1-p1 ; Align 242417 1 174 utg11_pilon exonerate:protein2genome:local gene 240509 241706 1934 - . gene_id 0 ; sequence GL50803_7865-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 240509 241706 . - . utg11_pilon exonerate:protein2genome:local exon 240509 241706 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 240509 241706 1934 - . alignment_id 0 ; Query GL50803_7865-t26_1-p1 ; Align 241707 1 651 ; Align 241055 218 6 ; Align 241049 221 540 utg11_pilon exonerate:protein2genome:local gene 236272 236694 691 + . gene_id 0 ; sequence GL50803_7870-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 236272 236694 . + . utg11_pilon exonerate:protein2genome:local exon 236272 236694 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 236272 236694 691 + . alignment_id 0 ; Query GL50803_7870-t26_1-p1 ; Align 236272 1 423 utg11_pilon exonerate:protein2genome:local gene 235914 236213 424 - . gene_id 0 ; sequence GL50803_7871-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 235914 236213 . - . utg11_pilon exonerate:protein2genome:local exon 235914 236213 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 235914 236213 424 - . alignment_id 0 ; Query GL50803_7871-t26_1-p1 ; Align 236214 1 300 utg11_pilon exonerate:protein2genome:local gene 235201 235872 1021 + . gene_id 0 ; sequence GL50803_7873-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 235201 235872 . + . utg11_pilon exonerate:protein2genome:local exon 235201 235872 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 235201 235872 1021 + . alignment_id 0 ; Query GL50803_7873-t26_1-p1 ; Align 235201 1 672 utg11_pilon exonerate:protein2genome:local gene 232676 235000 3490 - . gene_id 0 ; sequence GL50803_7874-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 232676 235000 . - . utg11_pilon exonerate:protein2genome:local exon 232676 235000 . - . insertions 3 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 232676 235000 3490 - . alignment_id 0 ; Query GL50803_7874-t26_1-p1 ; Align 235001 1 2007 ; Align 232991 670 24 ; Align 232967 681 291 utg11_pilon exonerate:protein2genome:local gene 231866 232579 1251 - . gene_id 0 ; sequence GL50803_7875-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 231866 232579 . - . utg11_pilon exonerate:protein2genome:local exon 231866 232579 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 231866 232579 1251 - . alignment_id 0 ; Query GL50803_7875-t26_1-p1 ; Align 232580 1 714 utg11_pilon exonerate:protein2genome:local gene 231478 231843 608 + . gene_id 0 ; sequence GL50803_7876-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 231478 231843 . + . utg11_pilon exonerate:protein2genome:local exon 231478 231843 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 231478 231843 608 + . alignment_id 0 ; Query GL50803_7876-t26_1-p1 ; Align 231478 1 366 utg11_pilon exonerate:protein2genome:local gene 229838 231446 1834 + . gene_id 0 ; sequence GL50803_7877-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 229838 231446 . + . utg11_pilon exonerate:protein2genome:local exon 229838 231446 . + . insertions 0 ; deletions 3 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 229838 231446 1834 + . alignment_id 0 ; Query GL50803_7877-t26_1-p1 ; Align 229838 1 720 ; Align 230558 244 864 ; Align 231423 532 24 utg11_pilon exonerate:protein2genome:local gene 229326 229760 746 - . gene_id 0 ; sequence GL50803_7878-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 229326 229760 . - . utg11_pilon exonerate:protein2genome:local exon 229326 229760 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 229326 229760 746 - . alignment_id 0 ; Query GL50803_7878-t26_1-p1 ; Align 229761 1 435 utg265_pilon exonerate:protein2genome:local gene 702218 704599 2543 - . gene_id 0 ; sequence GL50803_7890-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 702388 704599 . - . utg265_pilon exonerate:protein2genome:local exon 702388 704599 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local splice5 702386 702387 . - . intron_id 1 ; splice_site "TT" utg265_pilon exonerate:protein2genome:local intron 702349 702387 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 702349 702350 . - . intron_id 0 ; splice_site "AA" utg265_pilon exonerate:protein2genome:local cds 702218 702348 . - . utg265_pilon exonerate:protein2genome:local exon 702218 702348 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 702218 704599 2543 - . alignment_id 0 ; Query GL50803_7890-t26_1-p1 ; Align 704600 586 75 ; Align 704525 612 2136 ; Align 702347 1325 129 utg265_pilon exonerate:protein2genome:local gene 706494 708314 1744 - . gene_id 0 ; sequence GL50803_7891-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 707150 708314 . - . utg265_pilon exonerate:protein2genome:local exon 707150 708314 . - . insertions 0 ; deletions 11 utg265_pilon exonerate:protein2genome:local splice5 707148 707149 . - . intron_id 1 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 707114 707149 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 707114 707115 . - . intron_id 0 ; splice_site "CG" utg265_pilon exonerate:protein2genome:local cds 706494 707113 . - . utg265_pilon exonerate:protein2genome:local exon 706494 707113 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 706494 708314 1744 - . alignment_id 0 ; Query GL50803_7891-t26_1-p1 ; Align 708315 1 528 ; Align 707787 181 114 ; Align 707673 223 60 ; Align 707613 245 105 ; Align 707508 281 357 ; Align 707112 401 618 utg265_pilon exonerate:protein2genome:local gene 710152 710787 928 - . gene_id 0 ; sequence GL50803_7893-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 710152 710787 . - . utg265_pilon exonerate:protein2genome:local exon 710152 710787 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 710152 710787 928 - . alignment_id 0 ; Query GL50803_7893-t26_1-p1 ; Align 710788 1 636 utg265_pilon exonerate:protein2genome:local gene 724686 725543 1255 + . gene_id 0 ; sequence GL50803_7896-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 724686 725543 . + . utg265_pilon exonerate:protein2genome:local exon 724686 725543 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 724686 725543 1255 + . alignment_id 0 ; Query GL50803_7896-t26_1-p1 ; Align 724686 1 858 utg731_pilon exonerate:protein2genome:local gene 764713 765537 1066 - . gene_id 0 ; sequence GL50803_7906-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 764713 765537 . - . utg731_pilon exonerate:protein2genome:local exon 764713 765537 . - . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 764713 765537 1066 - . alignment_id 0 ; Query GL50803_7906-t26_1-p1 ; Align 765538 1 732 ; Align 764806 247 93 utg731_pilon exonerate:protein2genome:local gene 757262 758923 2451 + . gene_id 0 ; sequence GL50803_7909-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 757262 758923 . + . utg731_pilon exonerate:protein2genome:local exon 757262 758923 . + . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 757262 758923 2451 + . alignment_id 0 ; Query GL50803_7909-t26_1-p1 ; Align 757262 1 1455 ; Align 758717 489 207 utg731_pilon exonerate:protein2genome:local gene 754344 756497 2787 + . gene_id 0 ; sequence GL50803_7913-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 754344 756497 . + . utg731_pilon exonerate:protein2genome:local exon 754344 756497 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 754344 756497 2787 + . alignment_id 0 ; Query GL50803_7913-t26_1-p1 ; Align 754344 1 2154 utg731_pilon exonerate:protein2genome:local gene 591212 591577 516 + . gene_id 0 ; sequence GL50803_7946-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 591212 591577 . + . utg731_pilon exonerate:protein2genome:local exon 591212 591577 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 591212 591577 516 + . alignment_id 0 ; Query GL50803_7946-t26_1-p1 ; Align 591212 1 366 utg731_pilon exonerate:protein2genome:local gene 590272 590730 584 - . gene_id 0 ; sequence GL50803_7948-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 590272 590730 . - . utg731_pilon exonerate:protein2genome:local exon 590272 590730 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 590272 590730 584 - . alignment_id 0 ; Query GL50803_7948-t26_1-p1 ; Align 590731 1 459 utg731_pilon exonerate:protein2genome:local gene 588991 590160 1905 - . gene_id 0 ; sequence GL50803_7950-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 588991 590160 . - . utg731_pilon exonerate:protein2genome:local exon 588991 590160 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 588991 590160 1905 - . alignment_id 0 ; Query GL50803_7950-t26_1-p1 ; Align 590161 1 1170 utg731_pilon exonerate:protein2genome:local gene 587350 588402 1706 + . gene_id 0 ; sequence GL50803_7953-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 587350 588402 . + . utg731_pilon exonerate:protein2genome:local exon 587350 588402 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 587350 588402 1706 + . alignment_id 0 ; Query GL50803_7953-t26_1-p1 ; Align 587350 1 1053 utg349_pilon exonerate:protein2genome:local gene 812460 813224 1258 + . gene_id 0 ; sequence GL50803_7962-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 812460 813224 . + . utg349_pilon exonerate:protein2genome:local exon 812460 813224 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 812460 813224 1258 + . alignment_id 0 ; Query GL50803_7962-t26_1-p1 ; Align 812460 1 765 utg349_pilon exonerate:protein2genome:local gene 818773 818938 134 - . gene_id 0 ; sequence GL50803_7964-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 818773 818938 . - . utg349_pilon exonerate:protein2genome:local exon 818773 818938 . - . insertions 0 ; deletions 2 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 818773 818938 134 - . alignment_id 0 ; Query GL50803_7964-t26_1-p1 ; Align 818939 2 42 ; Align 818896 16 6 ; Align 818890 20 117 utg349_pilon exonerate:protein2genome:local gene 818917 820637 2501 + . gene_id 0 ; sequence GL50803_7966-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 818917 820637 . + . utg349_pilon exonerate:protein2genome:local exon 818917 820637 . + . insertions 9 ; deletions 0 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 818917 820637 2501 + . alignment_id 0 ; Query GL50803_7966-t26_1-p1 ; Align 818917 1 897 ; Align 819815 300 147 ; Align 819971 349 384 ; Align 820356 477 282 utg349_pilon exonerate:protein2genome:local gene 820969 821922 1174 + . gene_id 0 ; sequence GL50803_7968-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 820969 821922 . + . utg349_pilon exonerate:protein2genome:local exon 820969 821922 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 820969 821922 1174 + . alignment_id 0 ; Query GL50803_7968-t26_1-p1 ; Align 820969 1 780 ; Align 821749 262 36 ; Align 821785 275 138 utg349_pilon exonerate:protein2genome:local gene 821961 822734 1028 + . gene_id 0 ; sequence GL50803_7969-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 821961 822734 . + . utg349_pilon exonerate:protein2genome:local exon 821961 822734 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 821961 822734 1028 + . alignment_id 0 ; Query GL50803_7969-t26_1-p1 ; Align 821961 1 774 utg349_pilon exonerate:protein2genome:local gene 822741 823394 763 - . gene_id 0 ; sequence GL50803_7970-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 822741 823394 . - . utg349_pilon exonerate:protein2genome:local exon 822741 823394 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 822741 823394 763 - . alignment_id 0 ; Query GL50803_7970-t26_1-p1 ; Align 823395 1 654 utg731_pilon exonerate:protein2genome:local gene 352841 353995 1699 - . gene_id 0 ; sequence GL50803_7982-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 352841 353995 . - . utg731_pilon exonerate:protein2genome:local exon 352841 353995 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 352841 353995 1699 - . alignment_id 0 ; Query GL50803_7982-t26_1-p1 ; Align 353996 1 1155 utg731_pilon exonerate:protein2genome:local gene 346720 347937 1624 - . gene_id 0 ; sequence GL50803_7988-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 346720 347937 . - . utg731_pilon exonerate:protein2genome:local exon 346720 347937 . - . insertions 12 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 346720 347937 1624 - . alignment_id 0 ; Query GL50803_7988-t26_1-p1 ; Align 347938 1 60 ; Align 347866 21 1146 utg731_pilon exonerate:protein2genome:local gene 346416 346745 467 + . gene_id 0 ; sequence GL50803_7989-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 346416 346745 . + . utg731_pilon exonerate:protein2genome:local exon 346416 346745 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 346416 346745 467 + . alignment_id 0 ; Query GL50803_7989-t26_1-p1 ; Align 346416 1 330 utg731_pilon exonerate:protein2genome:local gene 345847 346350 893 + . gene_id 0 ; sequence GL50803_7990-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 345847 346350 . + . utg731_pilon exonerate:protein2genome:local exon 345847 346350 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 345847 346350 893 + . alignment_id 0 ; Query GL50803_7990-t26_1-p1 ; Align 345847 1 504 utg349_pilon exonerate:protein2genome:local gene 1217143 1217793 1104 + . gene_id 0 ; sequence GL50803_7999-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1217143 1217793 . + . utg349_pilon exonerate:protein2genome:local exon 1217143 1217793 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1217143 1217793 1104 + . alignment_id 0 ; Query GL50803_7999-t26_1-p1 ; Align 1217143 1 651 utg349_pilon exonerate:protein2genome:local gene 1215625 1216238 1070 + . gene_id 0 ; sequence GL50803_8001-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1215625 1216238 . + . utg349_pilon exonerate:protein2genome:local exon 1215625 1216238 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 1215625 1216238 1070 + . alignment_id 0 ; Query GL50803_8001-t26_1-p1 ; Align 1215625 1 300 ; Align 1215927 101 312 utg349_pilon exonerate:protein2genome:local gene 1214831 1215538 1141 - . gene_id 0 ; sequence GL50803_8002-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1214831 1215538 . - . utg349_pilon exonerate:protein2genome:local exon 1214831 1215538 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1214831 1215538 1141 - . alignment_id 0 ; Query GL50803_8002-t26_1-p1 ; Align 1215539 1 708 utg349_pilon exonerate:protein2genome:local gene 1214251 1214748 800 - . gene_id 0 ; sequence GL50803_8003-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1214251 1214748 . - . utg349_pilon exonerate:protein2genome:local exon 1214251 1214748 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1214251 1214748 800 - . alignment_id 0 ; Query GL50803_8003-t26_1-p1 ; Align 1214749 1 498 utg349_pilon exonerate:protein2genome:local gene 1214074 1214217 227 - . gene_id 0 ; sequence GL50803_8004-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1214074 1214217 . - . utg349_pilon exonerate:protein2genome:local exon 1214074 1214217 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1214074 1214217 227 - . alignment_id 0 ; Query GL50803_8004-t26_1-p1 ; Align 1214218 1 144 utg349_pilon exonerate:protein2genome:local gene 1206302 1206712 538 + . gene_id 0 ; sequence GL50803_8010-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1206302 1206712 . + . utg349_pilon exonerate:protein2genome:local exon 1206302 1206712 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1206302 1206712 538 + . alignment_id 0 ; Query GL50803_8010-t26_1-p1 ; Align 1206302 1 411 utg47_pilon exonerate:protein2genome:local gene 798260 802458 5797 + . gene_id 0 ; sequence GL50803_8023-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 798260 802458 . + . utg47_pilon exonerate:protein2genome:local exon 798260 802458 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 798260 802458 5797 + . alignment_id 0 ; Query GL50803_8023-t26_1-p1 ; Align 798260 1 1515 ; Align 799777 507 2682 utg47_pilon exonerate:protein2genome:local gene 802473 804431 2534 - . gene_id 0 ; sequence GL50803_8025-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 802473 804431 . - . utg47_pilon exonerate:protein2genome:local exon 802473 804431 . - . insertions 0 ; deletions 2 ; frameshifts 3 utg47_pilon exonerate:protein2genome:local similarity 802473 804431 2534 - . alignment_id 0 ; Query GL50803_8025-t26_1-p1 ; Align 804432 1 882 ; Align 803548 296 621 ; Align 802926 504 453 utg47_pilon exonerate:protein2genome:local gene 804476 806334 3023 + . gene_id 0 ; sequence GL50803_8026-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 804476 806334 . + . utg47_pilon exonerate:protein2genome:local exon 804476 806334 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 804476 806334 3023 + . alignment_id 0 ; Query GL50803_8026-t26_1-p1 ; Align 804476 1 153 ; Align 804631 53 1704 utg47_pilon exonerate:protein2genome:local gene 806649 806840 300 + . gene_id 0 ; sequence GL50803_8028-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 806649 806840 . + . utg47_pilon exonerate:protein2genome:local exon 806649 806840 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 806649 806840 300 + . alignment_id 0 ; Query GL50803_8028-t26_1-p1 ; Align 806649 1 192 utg99_pilon exonerate:protein2genome:local gene 26019 28283 3861 + . gene_id 0 ; sequence GL50803_8035-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 26019 28283 . + . utg99_pilon exonerate:protein2genome:local exon 26019 28283 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 26019 28283 3861 + . alignment_id 0 ; Query GL50803_8035-t26_1-p1 ; Align 26019 1 2265 utg99_pilon exonerate:protein2genome:local gene 22537 23460 1609 - . gene_id 0 ; sequence GL50803_8037-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 22537 23460 . - . utg99_pilon exonerate:protein2genome:local exon 22537 23460 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 22537 23460 1609 - . alignment_id 0 ; Query GL50803_8037-t26_1-p1 ; Align 23461 1 924 utg99_pilon exonerate:protein2genome:local gene 21215 22471 1791 - . gene_id 0 ; sequence GL50803_8038-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 21215 22471 . - . utg99_pilon exonerate:protein2genome:local exon 21215 22471 . - . insertions 0 ; deletions 2 utg99_pilon exonerate:protein2genome:local similarity 21215 22471 1791 - . alignment_id 0 ; Query GL50803_8038-t26_1-p1 ; Align 22472 1 807 ; Align 21665 272 450 utg99_pilon exonerate:protein2genome:local gene 16515 17426 1167 + . gene_id 0 ; sequence GL50803_8044-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 16515 17426 . + . utg99_pilon exonerate:protein2genome:local exon 16515 17426 . + . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 16515 17426 1167 + . alignment_id 0 ; Query GL50803_8044-t26_1-p1 ; Align 16515 13 501 ; Align 17016 181 411 utg64_pilon exonerate:protein2genome:local gene 37840 39072 1751 + . gene_id 0 ; sequence GL50803_8048-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 37840 39072 . + . utg64_pilon exonerate:protein2genome:local exon 37840 39072 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 37840 39072 1751 + . alignment_id 0 ; Query GL50803_8048-t26_1-p1 ; Align 37840 1 1233 utg64_pilon exonerate:protein2genome:local gene 39144 40637 2101 - . gene_id 0 ; sequence GL50803_8049-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 39144 40637 . - . utg64_pilon exonerate:protein2genome:local exon 39144 40637 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 39144 40637 2101 - . alignment_id 0 ; Query GL50803_8049-t26_1-p1 ; Align 40638 1 1494 utg64_pilon exonerate:protein2genome:local gene 40658 41296 637 + . gene_id 0 ; sequence GL50803_8051-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 40658 41296 . + . utg64_pilon exonerate:protein2genome:local exon 40658 41296 . + . insertions 0 ; deletions 6 utg64_pilon exonerate:protein2genome:local similarity 40658 41296 637 + . alignment_id 0 ; Query GL50803_8051-t26_1-p1 ; Align 40658 1 216 ; Align 40874 76 321 ; Align 41195 186 102 utg64_pilon exonerate:protein2genome:local gene 42561 42875 345 + . gene_id 0 ; sequence GL50803_8055-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 42561 42875 . + . utg64_pilon exonerate:protein2genome:local exon 42561 42875 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 42561 42875 345 + . alignment_id 0 ; Query GL50803_8055-t26_1-p1 ; Align 42561 194 315 utg64_pilon exonerate:protein2genome:local gene 43741 45477 2564 + . gene_id 0 ; sequence GL50803_8058-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 43741 45477 . + . utg64_pilon exonerate:protein2genome:local exon 43741 45477 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 43741 45477 2564 + . alignment_id 0 ; Query GL50803_8058-t26_1-p1 ; Align 43741 1 1098 ; Align 44842 367 636 utg64_pilon exonerate:protein2genome:local gene 46298 48379 2684 + . gene_id 0 ; sequence GL50803_8061-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 46298 48011 . + . utg64_pilon exonerate:protein2genome:local exon 46298 48011 . + . insertions 3 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 48012 48013 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 48012 48041 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 48040 48041 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 48042 48379 . + . utg64_pilon exonerate:protein2genome:local exon 48042 48379 . + . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 46298 48379 2684 + . alignment_id 0 ; Query GL50803_8061-t26_1-p1 ; Align 46298 1 942 ; Align 47240 316 687 ; Align 47930 545 81 ; Align 48044 575 336 utg64_pilon exonerate:protein2genome:local gene 48392 49717 1373 - . gene_id 0 ; sequence GL50803_8063-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 48392 49717 . - . utg64_pilon exonerate:protein2genome:local exon 48392 49717 . - . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 48392 49717 1373 - . alignment_id 0 ; Query GL50803_8063-t26_1-p1 ; Align 49718 1 735 ; Align 48983 248 591 utg64_pilon exonerate:protein2genome:local gene 49743 126044 620 - . gene_id 0 ; sequence GL50803_8064-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 125878 126044 . - . utg64_pilon exonerate:protein2genome:local exon 125878 126044 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 125876 125877 . - . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 49972 125877 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 49972 49973 . - . intron_id 0 ; splice_site "TG" utg64_pilon exonerate:protein2genome:local cds 49743 49971 . - . utg64_pilon exonerate:protein2genome:local exon 49743 49971 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 49743 126044 620 - . alignment_id 0 ; Query GL50803_8064-t26_1-p1 ; Align 126045 3 165 ; Align 49971 59 228 utg47_pilon exonerate:protein2genome:local gene 1297589 1299661 3205 - . gene_id 0 ; sequence GL50803_8074-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1297589 1299661 . - . utg47_pilon exonerate:protein2genome:local exon 1297589 1299661 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1297589 1299661 3205 - . alignment_id 0 ; Query GL50803_8074-t26_1-p1 ; Align 1299662 1 2073 utg47_pilon exonerate:protein2genome:local gene 1295680 1297611 2656 + . gene_id 0 ; sequence GL50803_8075-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1295680 1297611 . + . utg47_pilon exonerate:protein2genome:local exon 1295680 1297611 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1295680 1297611 2656 + . alignment_id 0 ; Query GL50803_8075-t26_1-p1 ; Align 1295680 1 690 ; Align 1296373 231 1239 utg47_pilon exonerate:protein2genome:local gene 1343425 1343994 652 + . gene_id 0 ; sequence GL50803_8078-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1343425 1343994 . + . utg47_pilon exonerate:protein2genome:local exon 1343425 1343994 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1343425 1343994 652 + . alignment_id 0 ; Query GL50803_8078-t26_1-p1 ; Align 1343425 5 273 ; Align 1343701 96 294 utg64_pilon exonerate:protein2genome:local gene 773806 774612 864 + . gene_id 0 ; sequence GL50803_8102-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 773806 774612 . + . utg64_pilon exonerate:protein2genome:local exon 773806 774612 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 773806 774612 864 + . alignment_id 0 ; Query GL50803_8102-t26_1-p1 ; Align 773806 1 807 utg265_pilon exonerate:protein2genome:local gene 602782 603507 1204 + . gene_id 0 ; sequence GL50803_8118-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 602782 603507 . + . utg265_pilon exonerate:protein2genome:local exon 602782 603507 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 602782 603507 1204 + . alignment_id 0 ; Query GL50803_8118-t26_1-p1 ; Align 602782 1 726 utg265_pilon exonerate:protein2genome:local gene 600173 600511 521 + . gene_id 0 ; sequence GL50803_8122-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 600173 600511 . + . utg265_pilon exonerate:protein2genome:local exon 600173 600511 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 600173 600511 521 + . alignment_id 0 ; Query GL50803_8122-t26_1-p1 ; Align 600173 1 339 utg265_pilon exonerate:protein2genome:local gene 599436 600146 618 - . gene_id 0 ; sequence GL50803_8123-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 599436 600146 . - . utg265_pilon exonerate:protein2genome:local exon 599436 600146 . - . insertions 0 ; deletions 5 utg265_pilon exonerate:protein2genome:local similarity 599436 600146 618 - . alignment_id 0 ; Query GL50803_8123-t26_1-p1 ; Align 600147 1 255 ; Align 599892 89 291 ; Align 599601 188 165 utg265_pilon exonerate:protein2genome:local gene 596440 599205 3823 + . gene_id 0 ; sequence GL50803_8125-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 596440 599205 . + . utg265_pilon exonerate:protein2genome:local exon 596440 599205 . + . insertions 3 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 596440 599205 3823 + . alignment_id 0 ; Query GL50803_8125-t26_1-p1 ; Align 596440 1 1641 ; Align 598084 548 48 ; Align 598132 567 1074 utg265_pilon exonerate:protein2genome:local gene 560385 560936 794 + . gene_id 0 ; sequence GL50803_8135-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 560385 560936 . + . utg265_pilon exonerate:protein2genome:local exon 560385 560936 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 560385 560936 794 + . alignment_id 0 ; Query GL50803_8135-t26_1-p1 ; Align 560385 1 552 utg265_pilon exonerate:protein2genome:local gene 565599 566795 1919 - . gene_id 0 ; sequence GL50803_8140-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 565599 566795 . - . utg265_pilon exonerate:protein2genome:local exon 565599 566795 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 565599 566795 1919 - . alignment_id 0 ; Query GL50803_8140-t26_1-p1 ; Align 566796 1 1197 utg265_pilon exonerate:protein2genome:local gene 566830 567210 608 + . gene_id 0 ; sequence GL50803_8141-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 566830 567210 . + . utg265_pilon exonerate:protein2genome:local exon 566830 567210 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 566830 567210 608 + . alignment_id 0 ; Query GL50803_8141-t26_1-p1 ; Align 566830 1 381 utg47_pilon exonerate:protein2genome:local gene 1280722 1283083 3009 + . gene_id 0 ; sequence GL50803_8145-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1280722 1283083 . + . utg47_pilon exonerate:protein2genome:local exon 1280722 1283083 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1280722 1283083 3009 + . alignment_id 0 ; Query GL50803_8145-t26_1-p1 ; Align 1280722 1 642 ; Align 1281365 215 1719 utg47_pilon exonerate:protein2genome:local gene 1283110 1284437 1716 + . gene_id 0 ; sequence GL50803_8146-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1283110 1284437 . + . utg47_pilon exonerate:protein2genome:local exon 1283110 1284437 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1283110 1284437 1716 + . alignment_id 0 ; Query GL50803_8146-t26_1-p1 ; Align 1283110 1 849 ; Align 1283961 285 477 utg47_pilon exonerate:protein2genome:local gene 1286207 1286926 821 + . gene_id 0 ; sequence GL50803_8148-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1286207 1286926 . + . utg47_pilon exonerate:protein2genome:local exon 1286207 1286926 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1286207 1286926 821 + . alignment_id 0 ; Query GL50803_8148-t26_1-p1 ; Align 1286207 1 720 utg47_pilon exonerate:protein2genome:local gene 1287660 1289401 2749 - . gene_id 0 ; sequence GL50803_8152-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1287660 1289401 . - . utg47_pilon exonerate:protein2genome:local exon 1287660 1289401 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1287660 1289401 2749 - . alignment_id 0 ; Query GL50803_8152-t26_1-p1 ; Align 1289402 1 717 ; Align 1288683 241 1023 utg47_pilon exonerate:protein2genome:local gene 1289410 1289584 105 + . gene_id 0 ; sequence GL50803_8153-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1289410 1289584 . + . utg47_pilon exonerate:protein2genome:local exon 1289410 1289584 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1289410 1289584 105 + . alignment_id 0 ; Query GL50803_8153-t26_1-p1 ; Align 1289410 1 42 ; Align 1289453 15 48 ; Align 1289501 32 84 utg47_pilon exonerate:protein2genome:local gene 1292309 1292911 933 + . gene_id 0 ; sequence GL50803_8157-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1292309 1292911 . + . utg47_pilon exonerate:protein2genome:local exon 1292309 1292911 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1292309 1292911 933 + . alignment_id 0 ; Query GL50803_8157-t26_1-p1 ; Align 1292309 1 603 utg47_pilon exonerate:protein2genome:local gene 1294660 1294869 260 + . gene_id 0 ; sequence GL50803_8160-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1294660 1294869 . + . utg47_pilon exonerate:protein2genome:local exon 1294660 1294869 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1294660 1294869 260 + . alignment_id 0 ; Query GL50803_8160-t26_1-p1 ; Align 1294660 1 210 utg47_pilon exonerate:protein2genome:local gene 1278262 1280346 3058 + . gene_id 0 ; sequence GL50803_8163-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1278262 1280346 . + . utg47_pilon exonerate:protein2genome:local exon 1278262 1280346 . + . insertions 0 ; deletions 2 ; frameshifts 6 utg47_pilon exonerate:protein2genome:local similarity 1278262 1280346 3058 + . alignment_id 0 ; Query GL50803_8163-t26_1-p1 ; Align 1278262 1 54 ; Align 1278321 19 816 ; Align 1279137 293 534 ; Align 1279672 471 675 utg47_pilon exonerate:protein2genome:local gene 1275478 1275765 195 + . gene_id 0 ; sequence GL50803_8165-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1275478 1275765 . + . utg47_pilon exonerate:protein2genome:local exon 1275478 1275765 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1275478 1275765 195 + . alignment_id 0 ; Query GL50803_8165-t26_1-p1 ; Align 1275478 1 288 utg47_pilon exonerate:protein2genome:local gene 951219 952361 1990 - . gene_id 0 ; sequence GL50803_8172-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 951219 952361 . - . utg47_pilon exonerate:protein2genome:local exon 951219 952361 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 951219 952361 1990 - . alignment_id 0 ; Query GL50803_8172-t26_1-p1 ; Align 952362 1 1143 utg47_pilon exonerate:protein2genome:local gene 952842 954462 2420 + . gene_id 0 ; sequence GL50803_8173-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 952842 954462 . + . utg47_pilon exonerate:protein2genome:local exon 952842 954462 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 952842 954462 2420 + . alignment_id 0 ; Query GL50803_8173-t26_1-p1 ; Align 952842 1 1551 ; Align 954394 518 69 utg47_pilon exonerate:protein2genome:local gene 954500 956995 4101 - . gene_id 0 ; sequence GL50803_8174-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 954500 956995 . - . utg47_pilon exonerate:protein2genome:local exon 954500 956995 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 954500 956995 4101 - . alignment_id 0 ; Query GL50803_8174-t26_1-p1 ; Align 956996 1 2496 utg47_pilon exonerate:protein2genome:local gene 960606 964532 5545 + . gene_id 0 ; sequence GL50803_8182-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 960606 964532 . + . utg47_pilon exonerate:protein2genome:local exon 960606 964532 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 960606 964532 5545 + . alignment_id 0 ; Query GL50803_8182-t26_1-p1 ; Align 960606 1 3927 utg731_pilon exonerate:protein2genome:local gene 1548252 1549628 2021 + . gene_id 0 ; sequence GL50803_8189-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1548252 1549628 . + . utg731_pilon exonerate:protein2genome:local exon 1548252 1549628 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1548252 1549628 2021 + . alignment_id 0 ; Query GL50803_8189-t26_1-p1 ; Align 1548252 1 1377 utg731_pilon exonerate:protein2genome:local gene 1546504 1547667 1518 + . gene_id 0 ; sequence GL50803_8191-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1546504 1547667 . + . utg731_pilon exonerate:protein2genome:local exon 1546504 1547667 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1546504 1547667 1518 + . alignment_id 0 ; Query GL50803_8191-t26_1-p1 ; Align 1546504 8 1164 utg731_pilon exonerate:protein2genome:local gene 1541623 1544118 3052 + . gene_id 0 ; sequence GL50803_8195-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1541623 1544118 . + . utg731_pilon exonerate:protein2genome:local exon 1541623 1544118 . + . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1541623 1544118 3052 + . alignment_id 0 ; Query GL50803_8195-t26_1-p1 ; Align 1541623 1 1620 ; Align 1543243 544 876 utg731_pilon exonerate:protein2genome:local gene 1537910 1538203 409 - . gene_id 0 ; sequence GL50803_8200-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1537910 1538203 . - . utg731_pilon exonerate:protein2genome:local exon 1537910 1538203 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1537910 1538203 409 - . alignment_id 0 ; Query GL50803_8200-t26_1-p1 ; Align 1538204 1 294 utg731_pilon exonerate:protein2genome:local gene 1537108 1537905 1069 + . gene_id 0 ; sequence GL50803_8201-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1537108 1537905 . + . utg731_pilon exonerate:protein2genome:local exon 1537108 1537905 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1537108 1537905 1069 + . alignment_id 0 ; Query GL50803_8201-t26_1-p1 ; Align 1537108 1 798 utg731_pilon exonerate:protein2genome:local gene 1533068 1534345 1767 + . gene_id 0 ; sequence GL50803_8204-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1533068 1534345 . + . utg731_pilon exonerate:protein2genome:local exon 1533068 1534345 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1533068 1534345 1767 + . alignment_id 0 ; Query GL50803_8204-t26_1-p1 ; Align 1533068 1 864 ; Align 1533932 290 414 utg18_pilon exonerate:protein2genome:local gene 49936 50802 930 - . gene_id 0 ; sequence GL50803_8208-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 49936 50802 . - . utg18_pilon exonerate:protein2genome:local exon 49936 50802 . - . insertions 0 ; deletions 3 utg18_pilon exonerate:protein2genome:local similarity 49936 50802 930 - . alignment_id 0 ; Query GL50803_8208-t26_1-p1 ; Align 50803 2 306 ; Align 50497 106 258 ; Align 50239 193 303 utg18_pilon exonerate:protein2genome:local gene 49090 49884 1193 - . gene_id 0 ; sequence GL50803_8209-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 49090 49884 . - . utg18_pilon exonerate:protein2genome:local exon 49090 49884 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 49090 49884 1193 - . alignment_id 0 ; Query GL50803_8209-t26_1-p1 ; Align 49885 1 795 utg18_pilon exonerate:protein2genome:local gene 46449 48701 3513 - . gene_id 0 ; sequence GL50803_8210-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 46449 48701 . - . utg18_pilon exonerate:protein2genome:local exon 46449 48701 . - . insertions 3 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 46449 48701 3513 - . alignment_id 0 ; Query GL50803_8210-t26_1-p1 ; Align 48702 1 720 ; Align 47979 241 1530 utg731_pilon exonerate:protein2genome:local gene 1625388 1627132 2835 - . gene_id 0 ; sequence GL50803_8217-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1625388 1627132 . - . utg731_pilon exonerate:protein2genome:local exon 1625388 1627132 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 1625388 1627132 2835 - . alignment_id 0 ; Query GL50803_8217-t26_1-p1 ; Align 1627133 1 732 ; Align 1626399 246 1011 utg18_pilon exonerate:protein2genome:local gene 28700 31576 3735 - . gene_id 0 ; sequence GL50803_8218-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 28700 31576 . - . utg18_pilon exonerate:protein2genome:local exon 28700 31576 . - . insertions 0 ; deletions 8 utg18_pilon exonerate:protein2genome:local similarity 28700 31576 3735 - . alignment_id 0 ; Query GL50803_8218-t26_1-p1 ; Align 31577 1 549 ; Align 31028 185 525 ; Align 30503 362 63 ; Align 30440 384 1191 ; Align 29249 782 333 ; Align 28916 896 216 utg64_pilon exonerate:protein2genome:local gene 60648 63839 4805 + . gene_id 0 ; sequence GL50803_8227-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 60648 63839 . + . utg64_pilon exonerate:protein2genome:local exon 60648 63839 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 60648 63839 4805 + . alignment_id 0 ; Query GL50803_8227-t26_1-p1 ; Align 60648 1 3192 utg64_pilon exonerate:protein2genome:local gene 63974 67789 6038 - . gene_id 0 ; sequence GL50803_8228-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 63974 67789 . - . utg64_pilon exonerate:protein2genome:local exon 63974 67789 . - . insertions 0 ; deletions 4 utg64_pilon exonerate:protein2genome:local similarity 63974 67789 6038 - . alignment_id 0 ; Query GL50803_8228-t26_1-p1 ; Align 67790 1 1092 ; Align 66698 369 2724 utg47_pilon exonerate:protein2genome:local gene 179814 298555 454 - . gene_id 0 ; sequence GL50803_8235-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 298291 298555 . - . utg47_pilon exonerate:protein2genome:local exon 298291 298555 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 298289 298290 . - . intron_id 1 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 180284 298290 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 180284 180285 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 179814 180283 . - . utg47_pilon exonerate:protein2genome:local exon 179814 180283 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 179814 298555 454 - . alignment_id 0 ; Query GL50803_8235-t26_1-p1 ; Align 298556 61 264 ; Align 180282 150 468 utg64_pilon exonerate:protein2genome:local gene 132291 132557 453 + . gene_id 0 ; sequence GL50803_8241-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 132291 132557 . + . utg64_pilon exonerate:protein2genome:local exon 132291 132557 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 132291 132557 453 + . alignment_id 0 ; Query GL50803_8241-t26_1-p1 ; Align 132291 1 267 utg64_pilon exonerate:protein2genome:local gene 132092 132280 335 - . gene_id 0 ; sequence GL50803_8242-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 132092 132280 . - . utg64_pilon exonerate:protein2genome:local exon 132092 132280 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 132092 132280 335 - . alignment_id 0 ; Query GL50803_8242-t26_1-p1 ; Align 132281 1 189 utg64_pilon exonerate:protein2genome:local gene 129997 132018 2795 + . gene_id 0 ; sequence GL50803_8243-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 129997 132018 . + . utg64_pilon exonerate:protein2genome:local exon 129997 132018 . + . insertions 3 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 129997 132018 2795 + . alignment_id 0 ; Query GL50803_8243-t26_1-p1 ; Align 129997 1 546 ; Align 130546 183 534 ; Align 131080 362 939 utg64_pilon exonerate:protein2genome:local gene 128877 129671 1273 + . gene_id 0 ; sequence GL50803_8245-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 128877 129671 . + . utg64_pilon exonerate:protein2genome:local exon 128877 129671 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 128877 129671 1273 + . alignment_id 0 ; Query GL50803_8245-t26_1-p1 ; Align 128877 1 774 ; Align 129651 260 21 utg64_pilon exonerate:protein2genome:local gene 125036 125512 577 - . gene_id 0 ; sequence GL50803_8250-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 125036 125512 . - . utg64_pilon exonerate:protein2genome:local exon 125036 125512 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 125036 125512 577 - . alignment_id 0 ; Query GL50803_8250-t26_1-p1 ; Align 125513 1 273 ; Align 125237 92 201 utg47_pilon exonerate:protein2genome:local gene 1095388 1095831 650 - . gene_id 0 ; sequence GL50803_8253-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1095388 1095831 . - . utg47_pilon exonerate:protein2genome:local exon 1095388 1095831 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1095388 1095831 650 - . alignment_id 0 ; Query GL50803_8253-t26_1-p1 ; Align 1095832 1 444 utg47_pilon exonerate:protein2genome:local gene 1095079 1095345 275 + . gene_id 0 ; sequence GL50803_8254-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1095079 1095345 . + . utg47_pilon exonerate:protein2genome:local exon 1095079 1095345 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1095079 1095345 275 + . alignment_id 0 ; Query GL50803_8254-t26_1-p1 ; Align 1095079 4 267 utg47_pilon exonerate:protein2genome:local gene 1089888 1090355 657 + . gene_id 0 ; sequence GL50803_8260-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1089888 1090355 . + . utg47_pilon exonerate:protein2genome:local exon 1089888 1090355 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1089888 1090355 657 + . alignment_id 0 ; Query GL50803_8260-t26_1-p1 ; Align 1089888 1 468 utg47_pilon exonerate:protein2genome:local gene 1087228 1087611 508 + . gene_id 0 ; sequence GL50803_8263-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1087228 1087611 . + . utg47_pilon exonerate:protein2genome:local exon 1087228 1087611 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1087228 1087611 508 + . alignment_id 0 ; Query GL50803_8263-t26_1-p1 ; Align 1087228 1 384 utg265_pilon exonerate:protein2genome:local gene 736589 736897 377 - . gene_id 0 ; sequence GL50803_8317-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 736589 736897 . - . utg265_pilon exonerate:protein2genome:local exon 736589 736897 . - . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 736589 736897 377 - . alignment_id 0 ; Query GL50803_8317-t26_1-p1 ; Align 736898 11 120 ; Align 736775 51 186 utg349_pilon exonerate:protein2genome:local gene 125210 126533 1462 - . gene_id 0 ; sequence GL50803_8322-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 125210 126533 . - . utg349_pilon exonerate:protein2genome:local exon 125210 126533 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 125210 126533 1462 - . alignment_id 0 ; Query GL50803_8322-t26_1-p1 ; Align 126534 7 63 ; Align 126470 28 1260 utg349_pilon exonerate:protein2genome:local gene 123828 124475 806 - . gene_id 0 ; sequence GL50803_8325-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 123828 124475 . - . utg349_pilon exonerate:protein2genome:local exon 123828 124475 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 123828 124475 806 - . alignment_id 0 ; Query GL50803_8325-t26_1-p1 ; Align 124476 1 444 ; Align 124032 150 204 utg349_pilon exonerate:protein2genome:local gene 115448 116002 911 + . gene_id 0 ; sequence GL50803_8329-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 115448 116002 . + . utg349_pilon exonerate:protein2genome:local exon 115448 116002 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 115448 116002 911 + . alignment_id 0 ; Query GL50803_8329-t26_1-p1 ; Align 115448 1 555 utg64_pilon exonerate:protein2genome:local gene 16876 153637 756 + . gene_id 0 ; sequence GL50803_8338-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 16876 17282 . + . utg64_pilon exonerate:protein2genome:local exon 16876 17282 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 17283 17284 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 17283 71754 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 71753 71754 . + . intron_id 0 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local cds 71755 71906 . + . utg64_pilon exonerate:protein2genome:local exon 71755 71906 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 71907 71908 . + . intron_id 2 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 71907 153512 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 153511 153512 . + . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 153513 153637 . + . utg64_pilon exonerate:protein2genome:local exon 153513 153637 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 16876 153637 756 + . alignment_id 0 ; Query GL50803_8338-t26_1-p1 ; Align 16876 2 405 ; Align 71756 138 150 ; Align 153515 189 123 utg349_pilon exonerate:protein2genome:local gene 1540818 1541399 649 + . gene_id 0 ; sequence GL50803_8348-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1540818 1541399 . + . utg349_pilon exonerate:protein2genome:local exon 1540818 1541399 . + . insertions 0 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 1540818 1541399 649 + . alignment_id 0 ; Query GL50803_8348-t26_1-p1 ; Align 1540818 1 426 ; Align 1541244 147 156 utg349_pilon exonerate:protein2genome:local gene 1541411 1542172 918 + . gene_id 0 ; sequence GL50803_8349-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1541411 1542172 . + . utg349_pilon exonerate:protein2genome:local exon 1541411 1542172 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1541411 1542172 918 + . alignment_id 0 ; Query GL50803_8349-t26_1-p1 ; Align 1541411 3 762 utg349_pilon exonerate:protein2genome:local gene 1542237 1544087 2703 + . gene_id 0 ; sequence GL50803_8350-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1542237 1544087 . + . utg349_pilon exonerate:protein2genome:local exon 1542237 1544087 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1542237 1544087 2703 + . alignment_id 0 ; Query GL50803_8350-t26_1-p1 ; Align 1542237 1 1851 utg308_pilon exonerate:protein2genome:local gene 706538 707086 664 + . gene_id 0 ; sequence GL50803_8354-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 706538 707086 . + . utg308_pilon exonerate:protein2genome:local exon 706538 707086 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 706538 707086 664 + . alignment_id 0 ; Query GL50803_8354-t26_1-p1 ; Align 706538 1 549 utg308_pilon exonerate:protein2genome:local gene 704360 704998 606 + . gene_id 0 ; sequence GL50803_8355-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 704360 704998 . + . utg308_pilon exonerate:protein2genome:local exon 704360 704998 . + . insertions 6 ; deletions 3 utg308_pilon exonerate:protein2genome:local similarity 704360 704998 606 + . alignment_id 0 ; Query GL50803_8355-t26_1-p1 ; Align 704360 1 252 ; Align 704612 86 30 ; Align 704642 97 45 ; Align 704687 113 18 ; Align 704711 119 288 utg308_pilon exonerate:protein2genome:local gene 702513 909176 557 - . gene_id 0 ; sequence GL50803_8357-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 909147 909176 . - . utg308_pilon exonerate:protein2genome:local exon 909147 909176 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local splice5 909145 909146 . - . intron_id 1 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 901003 909146 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 901003 901004 . - . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 900770 901002 . - . utg308_pilon exonerate:protein2genome:local exon 900770 901002 . - . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local splice5 900768 900769 . - . intron_id 2 ; splice_site "GT" utg308_pilon exonerate:protein2genome:local intron 703081 900769 . - . intron_id 2 utg308_pilon exonerate:protein2genome:local splice3 703081 703082 . - . intron_id 1 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 702513 703080 . - . utg308_pilon exonerate:protein2genome:local exon 702513 703080 . - . insertions 0 ; deletions 4 utg308_pilon exonerate:protein2genome:local similarity 702513 909176 557 - . alignment_id 0 ; Query GL50803_8357-t26_1-p1 ; Align 909177 126 30 ; Align 901003 136 105 ; Align 900898 173 126 ; Align 703080 216 303 ; Align 702777 318 231 ; Align 702546 398 33 utg308_pilon exonerate:protein2genome:local gene 701099 702493 1530 + . gene_id 0 ; sequence GL50803_8358-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 701099 702493 . + . utg308_pilon exonerate:protein2genome:local exon 701099 702493 . + . insertions 6 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 701099 702493 1530 + . alignment_id 0 ; Query GL50803_8358-t26_1-p1 ; Align 701099 1 219 ; Align 701324 74 891 ; Align 702215 372 279 utg308_pilon exonerate:protein2genome:local gene 700420 701010 870 - . gene_id 0 ; sequence GL50803_8359-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 700420 701010 . - . utg308_pilon exonerate:protein2genome:local exon 700420 701010 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 700420 701010 870 - . alignment_id 0 ; Query GL50803_8359-t26_1-p1 ; Align 701011 1 591 utg308_pilon exonerate:protein2genome:local gene 699015 700331 2063 + . gene_id 0 ; sequence GL50803_8360-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 699015 700331 . + . utg308_pilon exonerate:protein2genome:local exon 699015 700331 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 699015 700331 2063 + . alignment_id 0 ; Query GL50803_8360-t26_1-p1 ; Align 699015 1 1317 utg308_pilon exonerate:protein2genome:local gene 697232 698779 2571 + . gene_id 0 ; sequence GL50803_8361-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 697232 698779 . + . utg308_pilon exonerate:protein2genome:local exon 697232 698779 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 697232 698779 2571 + . alignment_id 0 ; Query GL50803_8361-t26_1-p1 ; Align 697232 1 1548 utg308_pilon exonerate:protein2genome:local gene 693257 694426 1592 + . gene_id 0 ; sequence GL50803_8364-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 693257 694426 . + . utg308_pilon exonerate:protein2genome:local exon 693257 694426 . + . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 693257 694426 1592 + . alignment_id 0 ; Query GL50803_8364-t26_1-p1 ; Align 693257 1 831 ; Align 694088 280 339 utg308_pilon exonerate:protein2genome:local gene 691945 692289 475 + . gene_id 0 ; sequence GL50803_8367-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 691945 692289 . + . utg308_pilon exonerate:protein2genome:local exon 691945 692289 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 691945 692289 475 + . alignment_id 0 ; Query GL50803_8367-t26_1-p1 ; Align 691945 26 345 utg64_pilon exonerate:protein2genome:local gene 680804 681415 712 + . gene_id 0 ; sequence GL50803_8371-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 680804 681415 . + . utg64_pilon exonerate:protein2genome:local exon 680804 681415 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 680804 681415 712 + . alignment_id 0 ; Query GL50803_8371-t26_1-p1 ; Align 680804 1 612 utg64_pilon exonerate:protein2genome:local gene 683762 684619 1191 - . gene_id 0 ; sequence GL50803_8377-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 683762 684619 . - . utg64_pilon exonerate:protein2genome:local exon 683762 684619 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 683762 684619 1191 - . alignment_id 0 ; Query GL50803_8377-t26_1-p1 ; Align 684620 12 858 utg64_pilon exonerate:protein2genome:local gene 687198 689024 2831 - . gene_id 0 ; sequence GL50803_8381-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 687198 689024 . - . utg64_pilon exonerate:protein2genome:local exon 687198 689024 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 687198 689024 2831 - . alignment_id 0 ; Query GL50803_8381-t26_1-p1 ; Align 689025 1 1827 utg64_pilon exonerate:protein2genome:local gene 689081 689920 1108 - . gene_id 0 ; sequence GL50803_8382-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 689081 689920 . - . utg64_pilon exonerate:protein2genome:local exon 689081 689920 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 689081 689920 1108 - . alignment_id 0 ; Query GL50803_8382-t26_1-p1 ; Align 689921 1 840 utg349_pilon exonerate:protein2genome:local gene 1252308 1253777 2059 - . gene_id 0 ; sequence GL50803_8388-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1252308 1253777 . - . utg349_pilon exonerate:protein2genome:local exon 1252308 1253777 . - . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 1252308 1253777 2059 - . alignment_id 0 ; Query GL50803_8388-t26_1-p1 ; Align 1253778 5 1404 ; Align 1252374 475 66 utg349_pilon exonerate:protein2genome:local gene 1250792 1252294 2056 + . gene_id 0 ; sequence GL50803_8389-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1250792 1252294 . + . utg349_pilon exonerate:protein2genome:local exon 1250792 1252294 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1250792 1252294 2056 + . alignment_id 0 ; Query GL50803_8389-t26_1-p1 ; Align 1250792 1 1503 utg349_pilon exonerate:protein2genome:local gene 1247164 1247403 419 + . gene_id 0 ; sequence GL50803_8394-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1247164 1247403 . + . utg349_pilon exonerate:protein2genome:local exon 1247164 1247403 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1247164 1247403 419 + . alignment_id 0 ; Query GL50803_8394-t26_1-p1 ; Align 1247164 2 240 utg47_pilon exonerate:protein2genome:local gene 479519 479713 285 - . gene_id 0 ; sequence GL50803_8404-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 479519 479713 . - . utg47_pilon exonerate:protein2genome:local exon 479519 479713 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 479519 479713 285 - . alignment_id 0 ; Query GL50803_8404-t26_1-p1 ; Align 479714 1 195 utg47_pilon exonerate:protein2genome:local gene 478647 479984 2252 + . gene_id 0 ; sequence GL50803_8405-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 478647 479984 . + . utg47_pilon exonerate:protein2genome:local exon 478647 479984 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 478647 479984 2252 + . alignment_id 0 ; Query GL50803_8405-t26_1-p1 ; Align 478647 1 855 ; Align 479505 286 480 utg47_pilon exonerate:protein2genome:local gene 475744 477261 2443 + . gene_id 0 ; sequence GL50803_8407-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 475744 477261 . + . utg47_pilon exonerate:protein2genome:local exon 475744 477261 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 475744 477261 2443 + . alignment_id 0 ; Query GL50803_8407-t26_1-p1 ; Align 475744 1 1518 utg99_pilon exonerate:protein2genome:local gene 399871 399963 103 + . gene_id 0 ; sequence GL50803_841-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 399871 399963 . + . utg99_pilon exonerate:protein2genome:local exon 399871 399963 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 399871 399963 103 + . alignment_id 0 ; Query GL50803_841-t26_1-p1 ; Align 399871 1 93 utg47_pilon exonerate:protein2genome:local gene 473482 474288 1200 + . gene_id 0 ; sequence GL50803_8410-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 473482 474288 . + . utg47_pilon exonerate:protein2genome:local exon 473482 474288 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 473482 474288 1200 + . alignment_id 0 ; Query GL50803_8410-t26_1-p1 ; Align 473482 1 807 utg47_pilon exonerate:protein2genome:local gene 464499 464663 138 + . gene_id 0 ; sequence GL50803_8414-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 464499 464663 . + . utg47_pilon exonerate:protein2genome:local exon 464499 464663 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 464499 464663 138 + . alignment_id 0 ; Query GL50803_8414-t26_1-p1 ; Align 464499 9 165 utg47_pilon exonerate:protein2genome:local gene 463119 464325 1733 + . gene_id 0 ; sequence GL50803_8415-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 463119 464325 . + . utg47_pilon exonerate:protein2genome:local exon 463119 464325 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 463119 464325 1733 + . alignment_id 0 ; Query GL50803_8415-t26_1-p1 ; Align 463119 1 96 ; Align 463216 33 621 ; Align 463837 241 489 utg47_pilon exonerate:protein2genome:local gene 1120222 1121100 1396 + . gene_id 0 ; sequence GL50803_8423-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1120222 1121100 . + . utg47_pilon exonerate:protein2genome:local exon 1120222 1121100 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1120222 1121100 1396 + . alignment_id 0 ; Query GL50803_8423-t26_1-p1 ; Align 1120222 1 879 utg47_pilon exonerate:protein2genome:local gene 1123297 1125816 4098 - . gene_id 0 ; sequence GL50803_8426-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1123297 1125816 . - . utg47_pilon exonerate:protein2genome:local exon 1123297 1125816 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1123297 1125816 4098 - . alignment_id 0 ; Query GL50803_8426-t26_1-p1 ; Align 1125817 1 2520 utg47_pilon exonerate:protein2genome:local gene 1125875 1126897 1651 - . gene_id 0 ; sequence GL50803_8427-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1125875 1126897 . - . utg47_pilon exonerate:protein2genome:local exon 1125875 1126897 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1125875 1126897 1651 - . alignment_id 0 ; Query GL50803_8427-t26_1-p1 ; Align 1126898 1 876 ; Align 1126022 294 147 utg47_pilon exonerate:protein2genome:local gene 1126965 1129006 2894 - . gene_id 0 ; sequence GL50803_8428-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1126965 1129006 . - . utg47_pilon exonerate:protein2genome:local exon 1126965 1129006 . - . insertions 6 ; deletions 2 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1126965 1129006 2894 - . alignment_id 0 ; Query GL50803_8428-t26_1-p1 ; Align 1129007 1 453 ; Align 1128553 152 429 ; Align 1128118 295 78 ; Align 1128040 323 207 ; Align 1127832 392 867 utg47_pilon exonerate:protein2genome:local gene 1129084 1130156 1341 + . gene_id 0 ; sequence GL50803_8429-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1129084 1130156 . + . utg47_pilon exonerate:protein2genome:local exon 1129084 1130156 . + . insertions 6 ; deletions 2 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1129084 1130156 1341 + . alignment_id 0 ; Query GL50803_8429-t26_1-p1 ; Align 1129084 1 429 ; Align 1129515 145 522 ; Align 1130037 320 33 ; Align 1130073 331 30 ; Align 1130106 341 51 utg47_pilon exonerate:protein2genome:local gene 1130359 1131150 1281 - . gene_id 0 ; sequence GL50803_8430-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1130359 1131150 . - . utg47_pilon exonerate:protein2genome:local exon 1130359 1131150 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1130359 1131150 1281 - . alignment_id 0 ; Query GL50803_8430-t26_1-p1 ; Align 1131151 1 792 utg47_pilon exonerate:protein2genome:local gene 1135605 1135853 452 - . gene_id 0 ; sequence GL50803_8432-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1135605 1135853 . - . utg47_pilon exonerate:protein2genome:local exon 1135605 1135853 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1135605 1135853 452 - . alignment_id 0 ; Query GL50803_8432-t26_1-p1 ; Align 1135854 1 249 utg47_pilon exonerate:protein2genome:local gene 1148264 1149172 1184 - . gene_id 0 ; sequence GL50803_8433-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1148264 1149172 . - . utg47_pilon exonerate:protein2genome:local exon 1148264 1149172 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1148264 1149172 1184 - . alignment_id 0 ; Query GL50803_8433-t26_1-p1 ; Align 1149173 1 909 utg99_pilon exonerate:protein2genome:local gene 64557 65672 1346 - . gene_id 0 ; sequence GL50803_8438-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 64557 65672 . - . utg99_pilon exonerate:protein2genome:local exon 64557 65672 . - . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 64557 65672 1346 - . alignment_id 0 ; Query GL50803_8438-t26_1-p1 ; Align 65673 1 819 ; Align 64851 274 294 utg99_pilon exonerate:protein2genome:local gene 57721 59712 3214 + . gene_id 0 ; sequence GL50803_8444-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 57721 59712 . + . utg99_pilon exonerate:protein2genome:local exon 57721 59712 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 57721 59712 3214 + . alignment_id 0 ; Query GL50803_8444-t26_1-p1 ; Align 57721 3 1992 utg99_pilon exonerate:protein2genome:local gene 55868 57658 2965 - . gene_id 0 ; sequence GL50803_8445-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 55868 57658 . - . utg99_pilon exonerate:protein2genome:local exon 55868 57658 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 55868 57658 2965 - . alignment_id 0 ; Query GL50803_8445-t26_1-p1 ; Align 57659 1 1791 utg99_pilon exonerate:protein2genome:local gene 54301 55831 1823 + . gene_id 0 ; sequence GL50803_8446-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 54301 54953 . + . utg99_pilon exonerate:protein2genome:local exon 54301 54953 . + . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local splice5 54954 54955 . + . intron_id 1 ; splice_site "GC" utg99_pilon exonerate:protein2genome:local intron 54954 54983 . + . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 54982 54983 . + . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 54984 55831 . + . utg99_pilon exonerate:protein2genome:local exon 54984 55831 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg99_pilon exonerate:protein2genome:local similarity 54301 55831 1823 + . alignment_id 0 ; Query GL50803_8446-t26_1-p1 ; Align 54301 1 633 ; Align 54934 213 18 ; Align 54985 220 3 ; Align 54988 222 33 ; Align 55022 233 810 utg731_pilon exonerate:protein2genome:local gene 1201042 1201854 934 + . gene_id 0 ; sequence GL50803_8454-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1201042 1201854 . + . utg731_pilon exonerate:protein2genome:local exon 1201042 1201854 . + . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1201042 1201854 934 + . alignment_id 0 ; Query GL50803_8454-t26_1-p1 ; Align 1201042 1 417 ; Align 1201459 143 396 utg731_pilon exonerate:protein2genome:local gene 1202970 1204331 1893 + . gene_id 0 ; sequence GL50803_8456-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1202970 1204331 . + . utg731_pilon exonerate:protein2genome:local exon 1202970 1204331 . + . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1202970 1204331 1893 + . alignment_id 0 ; Query GL50803_8456-t26_1-p1 ; Align 1202970 204 1125 ; Align 1204095 582 237 utg731_pilon exonerate:protein2genome:local gene 1208715 1211195 3332 - . gene_id 0 ; sequence GL50803_8460-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1208715 1211195 . - . utg731_pilon exonerate:protein2genome:local exon 1208715 1211195 . - . insertions 3 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 1208715 1211195 3332 - . alignment_id 0 ; Query GL50803_8460-t26_1-p1 ; Align 1211196 1 795 ; Align 1210401 269 411 ; Align 1209987 406 444 ; Align 1209543 555 60 ; Align 1209483 576 768 utg731_pilon exonerate:protein2genome:local gene 1211366 1211770 662 - . gene_id 0 ; sequence GL50803_8462-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1211366 1211770 . - . utg731_pilon exonerate:protein2genome:local exon 1211366 1211770 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1211366 1211770 662 - . alignment_id 0 ; Query GL50803_8462-t26_1-p1 ; Align 1211771 1 405 utg731_pilon exonerate:protein2genome:local gene 1212023 1213366 1769 + . gene_id 0 ; sequence GL50803_8464-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1212023 1213366 . + . utg731_pilon exonerate:protein2genome:local exon 1212023 1213366 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1212023 1213366 1769 + . alignment_id 0 ; Query GL50803_8464-t26_1-p1 ; Align 1212023 18 594 ; Align 1212617 218 750 utg731_pilon exonerate:protein2genome:local gene 1213397 1215847 3144 + . gene_id 0 ; sequence GL50803_8465-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1213397 1215847 . + . utg731_pilon exonerate:protein2genome:local exon 1213397 1215847 . + . insertions 3 ; deletions 9 utg731_pilon exonerate:protein2genome:local similarity 1213397 1215847 3144 + . alignment_id 0 ; Query GL50803_8465-t26_1-p1 ; Align 1213397 1 537 ; Align 1213934 183 138 ; Align 1214072 232 336 ; Align 1214408 347 1137 ; Align 1215548 726 300 utg18_pilon exonerate:protein2genome:local gene 502966 503829 1171 - . gene_id 0 ; sequence GL50803_8468-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 502966 503829 . - . utg18_pilon exonerate:protein2genome:local exon 502966 503829 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 502966 503829 1171 - . alignment_id 0 ; Query GL50803_8468-t26_1-p1 ; Align 503830 1 864 utg18_pilon exonerate:protein2genome:local gene 519363 520715 1934 + . gene_id 0 ; sequence GL50803_8471-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 519363 520715 . + . utg18_pilon exonerate:protein2genome:local exon 519363 520715 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 519363 520715 1934 + . alignment_id 0 ; Query GL50803_8471-t26_1-p1 ; Align 519363 1 1353 utg731_pilon exonerate:protein2genome:local gene 272375 273028 1099 - . gene_id 0 ; sequence GL50803_8496-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 272375 273028 . - . utg731_pilon exonerate:protein2genome:local exon 272375 273028 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 272375 273028 1099 - . alignment_id 0 ; Query GL50803_8496-t26_1-p1 ; Align 273029 1 654 utg731_pilon exonerate:protein2genome:local gene 271392 272225 1203 - . gene_id 0 ; sequence GL50803_8497-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 271392 272225 . - . utg731_pilon exonerate:protein2genome:local exon 271392 272225 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 271392 272225 1203 - . alignment_id 0 ; Query GL50803_8497-t26_1-p1 ; Align 272226 1 834 utg349_pilon exonerate:protein2genome:local gene 394186 394881 1033 + . gene_id 0 ; sequence GL50803_8501-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 394186 394881 . + . utg349_pilon exonerate:protein2genome:local exon 394186 394881 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 394186 394881 1033 + . alignment_id 0 ; Query GL50803_8501-t26_1-p1 ; Align 394186 1 696 utg349_pilon exonerate:protein2genome:local gene 393606 393902 248 + . gene_id 0 ; sequence GL50803_8505-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 393606 393902 . + . utg349_pilon exonerate:protein2genome:local exon 393606 393902 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 393606 393902 248 + . alignment_id 0 ; Query GL50803_8505-t26_1-p1 ; Align 393606 1 297 utg349_pilon exonerate:protein2genome:local gene 391305 393095 2341 - . gene_id 0 ; sequence GL50803_8508-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 391305 393095 . - . utg349_pilon exonerate:protein2genome:local exon 391305 393095 . - . insertions 0 ; deletions 8 utg349_pilon exonerate:protein2genome:local similarity 391305 393095 2341 - . alignment_id 0 ; Query GL50803_8508-t26_1-p1 ; Align 393096 1 270 ; Align 392826 95 1332 ; Align 391494 543 189 utg349_pilon exonerate:protein2genome:local gene 390046 391248 1862 + . gene_id 0 ; sequence GL50803_8509-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 390046 391248 . + . utg349_pilon exonerate:protein2genome:local exon 390046 391248 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 390046 391248 1862 + . alignment_id 0 ; Query GL50803_8509-t26_1-p1 ; Align 390046 8 834 ; Align 390880 287 369 utg349_pilon exonerate:protein2genome:local gene 389201 389824 872 - . gene_id 0 ; sequence GL50803_8511-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 389201 389824 . - . utg349_pilon exonerate:protein2genome:local exon 389201 389824 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 389201 389824 872 - . alignment_id 0 ; Query GL50803_8511-t26_1-p1 ; Align 389825 1 624 utg349_pilon exonerate:protein2genome:local gene 387606 389183 1933 + . gene_id 0 ; sequence GL50803_8512-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 387606 388919 . + . utg349_pilon exonerate:protein2genome:local exon 387606 388919 . + . insertions 0 ; deletions 6 utg349_pilon exonerate:protein2genome:local splice5 388920 388921 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 388920 388961 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 388960 388961 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 388962 389183 . + . utg349_pilon exonerate:protein2genome:local exon 388962 389183 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 387606 389183 1933 + . alignment_id 0 ; Query GL50803_8512-t26_1-p1 ; Align 387606 1 1167 ; Align 388773 395 117 ; Align 388890 435 30 ; Align 388962 445 222 utg349_pilon exonerate:protein2genome:local gene 386761 387568 1217 - . gene_id 0 ; sequence GL50803_8513-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 386761 387568 . - . utg349_pilon exonerate:protein2genome:local exon 386761 387568 . - . insertions 3 ; deletions 0 ; frameshifts 4 utg349_pilon exonerate:protein2genome:local similarity 386761 387568 1217 - . alignment_id 0 ; Query GL50803_8513-t26_1-p1 ; Align 387569 1 204 ; Align 387358 69 597 utg349_pilon exonerate:protein2genome:local gene 383165 384352 1422 - . gene_id 0 ; sequence GL50803_8516-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 383165 384352 . - . utg349_pilon exonerate:protein2genome:local exon 383165 384352 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 383165 384352 1422 - . alignment_id 0 ; Query GL50803_8516-t26_1-p1 ; Align 384353 1 438 ; Align 383915 150 750 utg349_pilon exonerate:protein2genome:local gene 381931 382239 507 + . gene_id 0 ; sequence GL50803_8518-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 381931 382239 . + . utg349_pilon exonerate:protein2genome:local exon 381931 382239 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 381931 382239 507 + . alignment_id 0 ; Query GL50803_8518-t26_1-p1 ; Align 381931 1 309 utg349_pilon exonerate:protein2genome:local gene 181432 604508 1605 + . gene_id 0 ; sequence GL50803_8523-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 181432 181559 . + . utg349_pilon exonerate:protein2genome:local exon 181432 181559 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 181560 181561 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 181560 378414 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 378413 378414 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 378415 379721 . + . utg349_pilon exonerate:protein2genome:local exon 378415 379721 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local splice5 379722 379723 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 379722 499822 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 499821 499822 . + . intron_id 1 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 499823 499830 . + . utg349_pilon exonerate:protein2genome:local exon 499823 499830 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 499831 499832 . + . intron_id 3 ; splice_site "CT" utg349_pilon exonerate:protein2genome:local intron 499831 604454 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 604453 604454 . + . intron_id 2 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 604455 604508 . + . utg349_pilon exonerate:protein2genome:local exon 604455 604508 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 181432 604508 1605 + . alignment_id 0 ; Query GL50803_8523-t26_1-p1 ; Align 181432 161 126 ; Align 378416 204 882 ; Align 379298 499 21 ; Align 379319 507 402 ; Align 499825 642 6 ; Align 604455 644 54 utg349_pilon exonerate:protein2genome:local gene 376461 377744 1691 + . gene_id 0 ; sequence GL50803_8524-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 376461 377744 . + . utg349_pilon exonerate:protein2genome:local exon 376461 377744 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 376461 377744 1691 + . alignment_id 0 ; Query GL50803_8524-t26_1-p1 ; Align 376461 2 1284 utg349_pilon exonerate:protein2genome:local gene 375876 376436 502 - . gene_id 0 ; sequence GL50803_8525-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 375876 376436 . - . utg349_pilon exonerate:protein2genome:local exon 375876 376436 . - . insertions 6 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 375876 376436 502 - . alignment_id 0 ; Query GL50803_8525-t26_1-p1 ; Align 376437 1 330 ; Align 376104 111 39 ; Align 376062 124 186 utg64_pilon exonerate:protein2genome:local gene 1022943 1024526 2418 - . gene_id 0 ; sequence GL50803_8528-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1022943 1024526 . - . utg64_pilon exonerate:protein2genome:local exon 1022943 1024526 . - . insertions 3 ; deletions 1 utg64_pilon exonerate:protein2genome:local similarity 1022943 1024526 2418 - . alignment_id 0 ; Query GL50803_8528-t26_1-p1 ; Align 1024527 1 1098 ; Align 1023426 367 372 ; Align 1023054 492 111 utg47_pilon exonerate:protein2genome:local gene 116857 121284 6471 - . gene_id 0 ; sequence GL50803_8556-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 116857 121284 . - . utg47_pilon exonerate:protein2genome:local exon 116857 121284 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 116857 121284 6471 - . alignment_id 0 ; Query GL50803_8556-t26_1-p1 ; Align 121285 1 4428 utg47_pilon exonerate:protein2genome:local gene 121892 123799 2338 - . gene_id 0 ; sequence GL50803_8557-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 121892 123799 . - . utg47_pilon exonerate:protein2genome:local exon 121892 123799 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 121892 123799 2338 - . alignment_id 0 ; Query GL50803_8557-t26_1-p1 ; Align 123800 1 759 ; Align 123041 257 1149 utg47_pilon exonerate:protein2genome:local gene 125017 125536 790 + . gene_id 0 ; sequence GL50803_8559-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 125017 125536 . + . utg47_pilon exonerate:protein2genome:local exon 125017 125536 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 125017 125536 790 + . alignment_id 0 ; Query GL50803_8559-t26_1-p1 ; Align 125017 1 129 ; Align 125147 44 390 utg47_pilon exonerate:protein2genome:local gene 125652 126104 745 - . gene_id 0 ; sequence GL50803_8560-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 125652 126104 . - . utg47_pilon exonerate:protein2genome:local exon 125652 126104 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 125652 126104 745 - . alignment_id 0 ; Query GL50803_8560-t26_1-p1 ; Align 126105 1 453 utg47_pilon exonerate:protein2genome:local gene 129294 134369 5861 + . gene_id 0 ; sequence GL50803_8564-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 129294 131859 . + . utg47_pilon exonerate:protein2genome:local exon 129294 131859 . + . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local splice5 131860 131861 . + . intron_id 1 ; splice_site "GG" utg47_pilon exonerate:protein2genome:local intron 131860 131901 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 131900 131901 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 131902 134369 . + . utg47_pilon exonerate:protein2genome:local exon 131902 134369 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 129294 134369 5861 + . alignment_id 0 ; Query GL50803_8564-t26_1-p1 ; Align 129294 1 2223 ; Align 131517 746 342 ; Align 131904 861 231 ; Align 132141 938 2229 utg47_pilon exonerate:protein2genome:local gene 134382 135038 915 - . gene_id 0 ; sequence GL50803_8565-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 134382 135038 . - . utg47_pilon exonerate:protein2genome:local exon 134382 135038 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 134382 135038 915 - . alignment_id 0 ; Query GL50803_8565-t26_1-p1 ; Align 135039 37 657 utg349_pilon exonerate:protein2genome:local gene 472198 472719 658 - . gene_id 0 ; sequence GL50803_8585-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 472198 472719 . - . utg349_pilon exonerate:protein2genome:local exon 472198 472719 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 472198 472719 658 - . alignment_id 0 ; Query GL50803_8585-t26_1-p1 ; Align 472720 1 522 utg349_pilon exonerate:protein2genome:local gene 472733 475342 2745 + . gene_id 0 ; sequence GL50803_8586-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 472733 475342 . + . utg349_pilon exonerate:protein2genome:local exon 472733 475342 . + . insertions 21 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 472733 475342 2745 + . alignment_id 0 ; Query GL50803_8586-t26_1-p1 ; Align 472733 1 540 ; Align 473276 181 342 ; Align 473618 299 24 ; Align 473642 308 894 ; Align 474539 606 108 ; Align 474647 643 15 ; Align 474668 648 81 ; Align 474752 675 33 ; Align 474791 686 552 utg349_pilon exonerate:protein2genome:local gene 475376 476815 2364 + . gene_id 0 ; sequence GL50803_8587-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 475376 476815 . + . utg349_pilon exonerate:protein2genome:local exon 475376 476815 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 475376 476815 2364 + . alignment_id 0 ; Query GL50803_8587-t26_1-p1 ; Align 475376 1 831 ; Align 476207 280 609 utg349_pilon exonerate:protein2genome:local gene 476951 479053 2891 - . gene_id 0 ; sequence GL50803_8589-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 476951 479053 . - . utg349_pilon exonerate:protein2genome:local exon 476951 479053 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 476951 479053 2891 - . alignment_id 0 ; Query GL50803_8589-t26_1-p1 ; Align 479054 1 1116 ; Align 477938 374 987 utg349_pilon exonerate:protein2genome:local gene 416286 482826 2642 - . gene_id 0 ; sequence GL50803_8592-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 481107 482826 . - . utg349_pilon exonerate:protein2genome:local exon 481107 482826 . - . insertions 3 ; deletions 3 utg349_pilon exonerate:protein2genome:local splice5 481105 481106 . - . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 416354 481106 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 416354 416355 . - . intron_id 0 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 416286 416353 . - . utg349_pilon exonerate:protein2genome:local exon 416286 416353 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 416286 482826 2642 - . alignment_id 0 ; Query GL50803_8592-t26_1-p1 ; Align 482827 1 954 ; Align 481873 322 663 ; Align 481207 543 99 ; Align 416352 577 66 utg11_pilon exonerate:protein2genome:local gene 441346 441720 465 + . gene_id 0 ; sequence GL50803_8595-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 441346 441720 . + . utg11_pilon exonerate:protein2genome:local exon 441346 441720 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 441346 441720 465 + . alignment_id 0 ; Query GL50803_8595-t26_1-p1 ; Align 441346 1 189 ; Align 441535 65 78 ; Align 441613 92 108 utg731_pilon exonerate:protein2genome:local gene 862181 862690 787 + . gene_id 0 ; sequence GL50803_8604-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 862181 862690 . + . utg731_pilon exonerate:protein2genome:local exon 862181 862690 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 862181 862690 787 + . alignment_id 0 ; Query GL50803_8604-t26_1-p1 ; Align 862181 1 510 utg731_pilon exonerate:protein2genome:local gene 856209 859145 4090 - . gene_id 0 ; sequence GL50803_8608-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 856209 859145 . - . utg731_pilon exonerate:protein2genome:local exon 856209 859145 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 856209 859145 4090 - . alignment_id 0 ; Query GL50803_8608-t26_1-p1 ; Align 859146 5 2937 utg731_pilon exonerate:protein2genome:local gene 854587 856053 2147 + . gene_id 0 ; sequence GL50803_8609-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 854587 856053 . + . utg731_pilon exonerate:protein2genome:local exon 854587 856053 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 854587 856053 2147 + . alignment_id 0 ; Query GL50803_8609-t26_1-p1 ; Align 854587 1 1467 utg731_pilon exonerate:protein2genome:local gene 849009 854522 8091 - . gene_id 0 ; sequence GL50803_8610-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 849009 854522 . - . utg731_pilon exonerate:protein2genome:local exon 849009 854522 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 849009 854522 8091 - . alignment_id 0 ; Query GL50803_8610-t26_1-p1 ; Align 854523 1 5514 utg47_pilon exonerate:protein2genome:local gene 1896590 1897033 586 - . gene_id 0 ; sequence GL50803_8616-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1896590 1897033 . - . utg47_pilon exonerate:protein2genome:local exon 1896590 1897033 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1896590 1897033 586 - . alignment_id 0 ; Query GL50803_8616-t26_1-p1 ; Align 1897034 1 444 utg47_pilon exonerate:protein2genome:local gene 1894220 1895815 2251 - . gene_id 0 ; sequence GL50803_8619-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1894220 1895815 . - . utg47_pilon exonerate:protein2genome:local exon 1894220 1895815 . - . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 1894220 1895815 2251 - . alignment_id 0 ; Query GL50803_8619-t26_1-p1 ; Align 1895816 1 1086 ; Align 1894730 367 81 ; Align 1894649 395 429 utg99_pilon exonerate:protein2genome:local gene 529028 529510 396 - . gene_id 0 ; sequence GL50803_862-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 529028 529510 . - . utg99_pilon exonerate:protein2genome:local exon 529028 529510 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 529028 529510 396 - . alignment_id 0 ; Query GL50803_862-t26_1-p1 ; Align 529511 1 483 utg47_pilon exonerate:protein2genome:local gene 1892178 1893329 1459 - . gene_id 0 ; sequence GL50803_8620-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1892178 1893329 . - . utg47_pilon exonerate:protein2genome:local exon 1892178 1893329 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1892178 1893329 1459 - . alignment_id 0 ; Query GL50803_8620-t26_1-p1 ; Align 1893330 266 438 ; Align 1892892 413 714 utg47_pilon exonerate:protein2genome:local gene 1888432 1891941 5436 + . gene_id 0 ; sequence GL50803_8621-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1888432 1891941 . + . utg47_pilon exonerate:protein2genome:local exon 1888432 1891941 . + . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1888432 1891941 5436 + . alignment_id 0 ; Query GL50803_8621-t26_1-p1 ; Align 1888432 1 849 ; Align 1889281 287 2661 utg47_pilon exonerate:protein2genome:local gene 1880461 1882068 2265 - . gene_id 0 ; sequence GL50803_8623-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1880461 1882068 . - . utg47_pilon exonerate:protein2genome:local exon 1880461 1882068 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1880461 1882068 2265 - . alignment_id 0 ; Query GL50803_8623-t26_1-p1 ; Align 1882069 1 1608 utg47_pilon exonerate:protein2genome:local gene 1878530 1880428 2200 + . gene_id 0 ; sequence GL50803_8625-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1878530 1880428 . + . utg47_pilon exonerate:protein2genome:local exon 1878530 1880428 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1878530 1880428 2200 + . alignment_id 0 ; Query GL50803_8625-t26_1-p1 ; Align 1878530 1 1899 utg47_pilon exonerate:protein2genome:local gene 1877424 1878416 1499 - . gene_id 0 ; sequence GL50803_8626-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1877424 1878416 . - . utg47_pilon exonerate:protein2genome:local exon 1877424 1878416 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1877424 1878416 1499 - . alignment_id 0 ; Query GL50803_8626-t26_1-p1 ; Align 1878417 1 993 utg47_pilon exonerate:protein2genome:local gene 1876651 1877397 756 + . gene_id 0 ; sequence GL50803_8627-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1876651 1877397 . + . utg47_pilon exonerate:protein2genome:local exon 1876651 1877397 . + . insertions 3 ; deletions 9 utg47_pilon exonerate:protein2genome:local similarity 1876651 1877397 756 + . alignment_id 0 ; Query GL50803_8627-t26_1-p1 ; Align 1876651 1 210 ; Align 1876864 71 96 ; Align 1876960 108 105 ; Align 1877065 146 105 ; Align 1877170 182 228 utg349_pilon exonerate:protein2genome:local gene 270478 270960 780 - . gene_id 0 ; sequence GL50803_8638-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 270478 270960 . - . utg349_pilon exonerate:protein2genome:local exon 270478 270960 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 270478 270960 780 - . alignment_id 0 ; Query GL50803_8638-t26_1-p1 ; Align 270961 1 483 utg349_pilon exonerate:protein2genome:local gene 269080 270456 2010 + . gene_id 0 ; sequence GL50803_8639-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 269080 270456 . + . utg349_pilon exonerate:protein2genome:local exon 269080 270456 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 269080 270456 2010 + . alignment_id 0 ; Query GL50803_8639-t26_1-p1 ; Align 269080 1 1314 ; Align 270394 441 63 utg212_pilon exonerate:protein2genome:local gene 103230 103469 335 + . gene_id 0 ; sequence GL50803_86401-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 103230 103469 . + . utg212_pilon exonerate:protein2genome:local exon 103230 103469 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 103230 103469 335 + . alignment_id 0 ; Query GL50803_86401-t26_1-p1 ; Align 103230 1 240 utg212_pilon exonerate:protein2genome:local gene 104854 105288 332 - . gene_id 0 ; sequence GL50803_86403-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 104854 105288 . - . utg212_pilon exonerate:protein2genome:local exon 104854 105288 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 104854 105288 332 - . alignment_id 0 ; Query GL50803_86403-t26_1-p1 ; Align 105289 1 435 utg212_pilon exonerate:protein2genome:local gene 208988 209149 126 - . gene_id 0 ; sequence GL50803_86406-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 208988 209149 . - . utg212_pilon exonerate:protein2genome:local exon 208988 209149 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 208988 209149 126 - . alignment_id 0 ; Query GL50803_86406-t26_1-p1 ; Align 209150 14 162 utg18_pilon exonerate:protein2genome:local gene 154664 155752 1069 - . gene_id 0 ; sequence GL50803_86431-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 154664 155752 . - . utg18_pilon exonerate:protein2genome:local exon 154664 155752 . - . insertions 0 ; deletions 5 utg18_pilon exonerate:protein2genome:local similarity 154664 155752 1069 - . alignment_id 0 ; Query GL50803_86431-t26_1-p1 ; Align 155753 1 246 ; Align 155507 86 555 ; Align 154952 273 288 utg18_pilon exonerate:protein2genome:local gene 146865 147386 761 - . gene_id 0 ; sequence GL50803_86440-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 146865 147386 . - . utg18_pilon exonerate:protein2genome:local exon 146865 147386 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 146865 147386 761 - . alignment_id 0 ; Query GL50803_86440-t26_1-p1 ; Align 147387 1 522 utg18_pilon exonerate:protein2genome:local gene 143688 144929 2075 + . gene_id 0 ; sequence GL50803_86444-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 143688 144929 . + . utg18_pilon exonerate:protein2genome:local exon 143688 144929 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 143688 144929 2075 + . alignment_id 0 ; Query GL50803_86444-t26_1-p1 ; Align 143688 1 1242 utg212_pilon exonerate:protein2genome:local gene 127176 128120 1220 + . gene_id 0 ; sequence GL50803_86468-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 127176 128120 . + . utg212_pilon exonerate:protein2genome:local exon 127176 128120 . + . insertions 3 ; deletions 1 utg212_pilon exonerate:protein2genome:local similarity 127176 128120 1220 + . alignment_id 0 ; Query GL50803_86468-t26_1-p1 ; Align 127176 3 246 ; Align 127422 86 174 ; Align 127599 144 522 utg212_pilon exonerate:protein2genome:local gene 143220 143501 353 - . gene_id 0 ; sequence GL50803_86482-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 143220 143501 . - . utg212_pilon exonerate:protein2genome:local exon 143220 143501 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 143220 143501 353 - . alignment_id 0 ; Query GL50803_86482-t26_1-p1 ; Align 143502 1 282 utg212_pilon exonerate:protein2genome:local gene 144323 144643 294 - . gene_id 0 ; sequence GL50803_86484-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 144323 144643 . - . utg212_pilon exonerate:protein2genome:local exon 144323 144643 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 144323 144643 294 - . alignment_id 0 ; Query GL50803_86484-t26_1-p1 ; Align 144644 60 321 utg212_pilon exonerate:protein2genome:local gene 130596 131822 1898 + . gene_id 0 ; sequence GL50803_86498-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 130596 131822 . + . utg212_pilon exonerate:protein2genome:local exon 130596 131822 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 130596 131822 1898 + . alignment_id 0 ; Query GL50803_86498-t26_1-p1 ; Align 130596 1 1227 utg47_pilon exonerate:protein2genome:local gene 616016 616351 473 - . gene_id 0 ; sequence GL50803_8650-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 616016 616351 . - . utg47_pilon exonerate:protein2genome:local exon 616016 616351 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 616016 616351 473 - . alignment_id 0 ; Query GL50803_8650-t26_1-p1 ; Align 616352 4 336 utg47_pilon exonerate:protein2genome:local gene 616373 617143 794 + . gene_id 0 ; sequence GL50803_8651-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 616373 617143 . + . utg47_pilon exonerate:protein2genome:local exon 616373 617143 . + . insertions 0 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 616373 617143 794 + . alignment_id 0 ; Query GL50803_8651-t26_1-p1 ; Align 616373 1 516 ; Align 616889 174 51 ; Align 616940 192 204 utg731_pilon exonerate:protein2genome:local gene 411411 414304 4595 - . gene_id 0 ; sequence GL50803_86511-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 411411 414304 . - . utg731_pilon exonerate:protein2genome:local exon 411411 414304 . - . insertions 6 ; deletions 0 ; frameshifts 2 utg731_pilon exonerate:protein2genome:local similarity 411411 414304 4595 - . alignment_id 0 ; Query GL50803_86511-t26_1-p1 ; Align 414305 9 147 ; Align 414152 58 27 ; Align 414123 67 2712 utg47_pilon exonerate:protein2genome:local gene 617419 618754 1162 - . gene_id 0 ; sequence GL50803_8652-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 617419 618754 . - . utg47_pilon exonerate:protein2genome:local exon 617419 618754 . - . insertions 18 ; deletions 5 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 617419 618754 1162 - . alignment_id 0 ; Query GL50803_8652-t26_1-p1 ; Align 618755 1 285 ; Align 618470 97 168 ; Align 618302 154 69 ; Align 618233 178 189 ; Align 618044 242 105 ; Align 617924 277 72 ; Align 617849 301 147 ; Align 617701 351 282 utg731_pilon exonerate:protein2genome:local gene 398921 401404 2853 + . gene_id 0 ; sequence GL50803_86520-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 398921 401404 . + . utg731_pilon exonerate:protein2genome:local exon 398921 401404 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 398921 401404 2853 + . alignment_id 0 ; Query GL50803_86520-t26_1-p1 ; Align 398921 4 2091 ; Align 401015 701 390 utg47_pilon exonerate:protein2genome:local gene 619231 619950 604 - . gene_id 0 ; sequence GL50803_8654-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 619231 619950 . - . utg47_pilon exonerate:protein2genome:local exon 619231 619950 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 619231 619950 604 - . alignment_id 0 ; Query GL50803_8654-t26_1-p1 ; Align 619951 1 402 ; Align 619549 136 318 utg731_pilon exonerate:protein2genome:local gene 271737 271982 234 + . gene_id 0 ; sequence GL50803_86556-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 271737 271982 . + . utg731_pilon exonerate:protein2genome:local exon 271737 271982 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 271737 271982 234 + . alignment_id 0 ; Query GL50803_86556-t26_1-p1 ; Align 271737 1 246 utg47_pilon exonerate:protein2genome:local gene 620916 621510 919 + . gene_id 0 ; sequence GL50803_8657-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 620916 621510 . + . utg47_pilon exonerate:protein2genome:local exon 620916 621510 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 620916 621510 919 + . alignment_id 0 ; Query GL50803_8657-t26_1-p1 ; Align 620916 1 204 ; Align 621121 69 390 utg731_pilon exonerate:protein2genome:local gene 249037 249264 258 - . gene_id 0 ; sequence GL50803_86575-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 249037 249264 . - . utg731_pilon exonerate:protein2genome:local exon 249037 249264 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 249037 249264 258 - . alignment_id 0 ; Query GL50803_86575-t26_1-p1 ; Align 249265 1 228 utg47_pilon exonerate:protein2genome:local gene 621522 622514 1486 - . gene_id 0 ; sequence GL50803_8658-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 621522 622514 . - . utg47_pilon exonerate:protein2genome:local exon 621522 622514 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 621522 622514 1486 - . alignment_id 0 ; Query GL50803_8658-t26_1-p1 ; Align 622515 1 993 utg731_pilon exonerate:protein2genome:local gene 212383 221868 11163 + . gene_id 0 ; sequence GL50803_86593-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 212383 218340 . + . utg731_pilon exonerate:protein2genome:local exon 212383 218340 . + . insertions 15 ; deletions 5 ; frameshifts 8 utg731_pilon exonerate:protein2genome:local splice5 218341 218342 . + . intron_id 1 ; splice_site "CT" utg731_pilon exonerate:protein2genome:local intron 218341 218370 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 218369 218370 . + . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 218371 221868 . + . utg731_pilon exonerate:protein2genome:local exon 218371 221868 . + . insertions 3 ; deletions 0 ; frameshifts 4 utg731_pilon exonerate:protein2genome:local similarity 212383 221868 11163 + . alignment_id 0 ; Query GL50803_86593-t26_1-p1 ; Align 212383 1 2154 ; Align 214549 719 933 ; Align 215484 1030 3 ; Align 215487 1032 279 ; Align 215767 1125 222 ; Align 215989 1200 570 ; Align 216560 1390 801 ; Align 217363 1658 120 ; Align 217483 1699 333 ; Align 217818 1810 3 ; Align 217821 1812 369 ; Align 218193 1935 147 ; Align 218373 1985 2472 ; Align 220848 2809 264 ; Align 221116 2897 753 utg731_pilon exonerate:protein2genome:local gene 205736 206959 2095 + . gene_id 0 ; sequence GL50803_86600-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 205736 206959 . + . utg731_pilon exonerate:protein2genome:local exon 205736 206959 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 205736 206959 2095 + . alignment_id 0 ; Query GL50803_86600-t26_1-p1 ; Align 205736 13 1224 utg731_pilon exonerate:protein2genome:local gene 187212 187463 268 + . gene_id 0 ; sequence GL50803_86618-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 187212 187463 . + . utg731_pilon exonerate:protein2genome:local exon 187212 187463 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 187212 187463 268 + . alignment_id 0 ; Query GL50803_86618-t26_1-p1 ; Align 187212 1 186 ; Align 187398 64 66 utg731_pilon exonerate:protein2genome:local gene 184772 184999 321 - . gene_id 0 ; sequence GL50803_86623-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 184772 184999 . - . utg731_pilon exonerate:protein2genome:local exon 184772 184999 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 184772 184999 321 - . alignment_id 0 ; Query GL50803_86623-t26_1-p1 ; Align 185000 1 228 utg212_pilon exonerate:protein2genome:local gene 486297 486554 218 + . gene_id 0 ; sequence GL50803_86648-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 486297 486554 . + . utg212_pilon exonerate:protein2genome:local exon 486297 486554 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 486297 486554 218 + . alignment_id 0 ; Query GL50803_86648-t26_1-p1 ; Align 486297 1 258 utg265_pilon exonerate:protein2genome:local gene 155128 155541 683 + . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 155128 155541 . + . utg265_pilon exonerate:protein2genome:local exon 155128 155541 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 155128 155541 683 + . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 155128 156 414 utg265_pilon exonerate:protein2genome:local gene 157175 157588 683 + . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 157175 157588 . + . utg265_pilon exonerate:protein2genome:local exon 157175 157588 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 157175 157588 683 + . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 157175 156 414 utg265_pilon exonerate:protein2genome:local gene 158320 158733 683 + . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 158320 158733 . + . utg265_pilon exonerate:protein2genome:local exon 158320 158733 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 158320 158733 683 + . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 158320 156 414 utg265_pilon exonerate:protein2genome:local gene 159427 159840 683 + . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 159427 159840 . + . utg265_pilon exonerate:protein2genome:local exon 159427 159840 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 159427 159840 683 + . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 159427 156 414 utg265_pilon exonerate:protein2genome:local gene 160557 160970 683 + . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 160557 160970 . + . utg265_pilon exonerate:protein2genome:local exon 160557 160970 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 160557 160970 683 + . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 160557 156 414 utg265_pilon exonerate:protein2genome:local gene 161669 162082 683 + . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 161669 162082 . + . utg265_pilon exonerate:protein2genome:local exon 161669 162082 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 161669 162082 683 + . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 161669 156 414 utg265_pilon exonerate:protein2genome:local gene 162802 163215 683 + . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 162802 163215 . + . utg265_pilon exonerate:protein2genome:local exon 162802 163215 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 162802 163215 683 + . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 162802 156 414 utg265_pilon exonerate:protein2genome:local gene 163929 164342 683 + . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 163929 164342 . + . utg265_pilon exonerate:protein2genome:local exon 163929 164342 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 163929 164342 683 + . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 163929 156 414 utg265_pilon exonerate:protein2genome:local gene 165037 165450 683 + . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 165037 165450 . + . utg265_pilon exonerate:protein2genome:local exon 165037 165450 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 165037 165450 683 + . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 165037 156 414 utg265_pilon exonerate:protein2genome:local gene 167391 167804 683 + . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 167391 167804 . + . utg265_pilon exonerate:protein2genome:local exon 167391 167804 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 167391 167804 683 + . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 167391 156 414 utg265_pilon exonerate:protein2genome:local gene 177276 177689 683 + . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 177276 177689 . + . utg265_pilon exonerate:protein2genome:local exon 177276 177689 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 177276 177689 683 + . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 177276 156 414 utg265_pilon exonerate:protein2genome:local gene 178421 178834 683 + . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 178421 178834 . + . utg265_pilon exonerate:protein2genome:local exon 178421 178834 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 178421 178834 683 + . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 178421 156 414 utg265_pilon exonerate:protein2genome:local gene 179566 179979 683 + . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 179566 179979 . + . utg265_pilon exonerate:protein2genome:local exon 179566 179979 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 179566 179979 683 + . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 179566 156 414 utg25666_pilon exonerate:protein2genome:local gene 63697 64110 683 - . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg25666_pilon exonerate:protein2genome:local cds 63697 64110 . - . utg25666_pilon exonerate:protein2genome:local exon 63697 64110 . - . insertions 0 ; deletions 0 utg25666_pilon exonerate:protein2genome:local similarity 63697 64110 683 - . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 64111 156 414 utg25666_pilon exonerate:protein2genome:local gene 62605 63018 683 - . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg25666_pilon exonerate:protein2genome:local cds 62605 63018 . - . utg25666_pilon exonerate:protein2genome:local exon 62605 63018 . - . insertions 0 ; deletions 0 utg25666_pilon exonerate:protein2genome:local similarity 62605 63018 683 - . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 63019 156 414 utg25666_pilon exonerate:protein2genome:local gene 57105 57518 683 - . gene_id 0 ; sequence GL50803_86676-t26_1-p1 ; gene_orientation . utg25666_pilon exonerate:protein2genome:local cds 57105 57518 . - . utg25666_pilon exonerate:protein2genome:local exon 57105 57518 . - . insertions 0 ; deletions 0 utg25666_pilon exonerate:protein2genome:local similarity 57105 57518 683 - . alignment_id 0 ; Query GL50803_86676-t26_1-p1 ; Align 57519 156 414 utg265_pilon exonerate:protein2genome:local gene 151702 153794 1827 - . gene_id 0 ; sequence GL50803_86680-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 151702 153794 . - . utg265_pilon exonerate:protein2genome:local exon 151702 153794 . - . insertions 0 ; deletions 2 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 151702 153794 1827 - . alignment_id 0 ; Query GL50803_86680-t26_1-p1 ; Align 153795 1 924 ; Align 152871 311 219 ; Align 152651 384 546 ; Align 152104 566 402 utg265_pilon exonerate:protein2genome:local gene 148703 150807 3395 + . gene_id 0 ; sequence GL50803_86681-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 148703 150807 . + . utg265_pilon exonerate:protein2genome:local exon 148703 150807 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 148703 150807 3395 + . alignment_id 0 ; Query GL50803_86681-t26_1-p1 ; Align 148703 1 408 ; Align 149113 138 1695 utg265_pilon exonerate:protein2genome:local gene 147099 148628 2393 + . gene_id 0 ; sequence GL50803_86683-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 147099 148628 . + . utg265_pilon exonerate:protein2genome:local exon 147099 148628 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 147099 148628 2393 + . alignment_id 0 ; Query GL50803_86683-t26_1-p1 ; Align 147099 1 1530 utg265_pilon exonerate:protein2genome:local gene 110755 110988 115 + . gene_id 0 ; sequence GL50803_86710-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 110755 110988 . + . utg265_pilon exonerate:protein2genome:local exon 110755 110988 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 110755 110988 115 + . alignment_id 0 ; Query GL50803_86710-t26_1-p1 ; Align 110755 2 234 utg47_pilon exonerate:protein2genome:local gene 767669 767860 242 + . gene_id 0 ; sequence GL50803_86744-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 767669 767860 . + . utg47_pilon exonerate:protein2genome:local exon 767669 767860 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 767669 767860 242 + . alignment_id 0 ; Query GL50803_86744-t26_1-p1 ; Align 767669 1 192 utg47_pilon exonerate:protein2genome:local gene 756714 756932 221 + . gene_id 0 ; sequence GL50803_86757-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 756714 756932 . + . utg47_pilon exonerate:protein2genome:local exon 756714 756932 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 756714 756932 221 + . alignment_id 0 ; Query GL50803_86757-t26_1-p1 ; Align 756714 5 219 utg47_pilon exonerate:protein2genome:local gene 753996 756123 2711 + . gene_id 0 ; sequence GL50803_86761-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 753996 756123 . + . utg47_pilon exonerate:protein2genome:local exon 753996 756123 . + . insertions 0 ; deletions 3 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 753996 756123 2711 + . alignment_id 0 ; Query GL50803_86761-t26_1-p1 ; Align 753996 6 645 ; Align 754643 222 618 ; Align 755263 429 753 ; Align 756016 681 108 utg11_pilon exonerate:protein2genome:local gene 902002 905646 5151 - . gene_id 0 ; sequence GL50803_86815-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 902002 905646 . - . utg11_pilon exonerate:protein2genome:local exon 902002 905646 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 902002 905646 5151 - . alignment_id 0 ; Query GL50803_86815-t26_1-p1 ; Align 905647 1 2499 ; Align 903148 835 1146 utg11_pilon exonerate:protein2genome:local gene 174393 176618 3532 - . gene_id 0 ; sequence GL50803_8682-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 174393 176618 . - . utg11_pilon exonerate:protein2genome:local exon 174393 176618 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 174393 176618 3532 - . alignment_id 0 ; Query GL50803_8682-t26_1-p1 ; Align 176619 1 2226 utg11_pilon exonerate:protein2genome:local gene 899189 900244 1359 + . gene_id 0 ; sequence GL50803_86821-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 899189 900244 . + . utg11_pilon exonerate:protein2genome:local exon 899189 900244 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 899189 900244 1359 + . alignment_id 0 ; Query GL50803_86821-t26_1-p1 ; Align 899189 11 1056 utg11_pilon exonerate:protein2genome:local gene 724350 727673 4489 - . gene_id 0 ; sequence GL50803_86855-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 724350 727673 . - . utg11_pilon exonerate:protein2genome:local exon 724350 727673 . - . insertions 9 ; deletions 6 utg11_pilon exonerate:protein2genome:local similarity 724350 727673 4489 - . alignment_id 0 ; Query GL50803_86855-t26_1-p1 ; Align 727674 1 948 ; Align 726723 317 321 ; Align 726402 427 468 ; Align 725928 583 45 ; Align 725883 601 1533 utg11_pilon exonerate:protein2genome:local gene 171324 172835 2389 + . gene_id 0 ; sequence GL50803_8687-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 171324 172835 . + . utg11_pilon exonerate:protein2genome:local exon 171324 172835 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 171324 172835 2389 + . alignment_id 0 ; Query GL50803_8687-t26_1-p1 ; Align 171324 1 1512 utg11_pilon exonerate:protein2genome:local gene 679540 679866 289 + . gene_id 0 ; sequence GL50803_86888-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 679540 679866 . + . utg11_pilon exonerate:protein2genome:local exon 679540 679866 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 679540 679866 289 + . alignment_id 0 ; Query GL50803_86888-t26_1-p1 ; Align 679540 1 327 utg11_pilon exonerate:protein2genome:local gene 663465 663785 313 + . gene_id 0 ; sequence GL50803_86906-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 663465 663785 . + . utg11_pilon exonerate:protein2genome:local exon 663465 663785 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 663465 663785 313 + . alignment_id 0 ; Query GL50803_86906-t26_1-p1 ; Align 663465 1 321 utg11_pilon exonerate:protein2genome:local gene 659204 659371 151 + . gene_id 0 ; sequence GL50803_86908-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 659204 659371 . + . utg11_pilon exonerate:protein2genome:local exon 659204 659371 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 659204 659371 151 + . alignment_id 0 ; Query GL50803_86908-t26_1-p1 ; Align 659204 11 168 utg11_pilon exonerate:protein2genome:local gene 637994 638161 151 - . gene_id 0 ; sequence GL50803_86908-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 637994 638161 . - . utg11_pilon exonerate:protein2genome:local exon 637994 638161 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 637994 638161 151 - . alignment_id 0 ; Query GL50803_86908-t26_1-p1 ; Align 638162 11 168 utg11_pilon exonerate:protein2genome:local gene 168724 169701 1410 - . gene_id 0 ; sequence GL50803_8691-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 168724 169701 . - . utg11_pilon exonerate:protein2genome:local exon 168724 169701 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 168724 169701 1410 - . alignment_id 0 ; Query GL50803_8691-t26_1-p1 ; Align 169702 25 978 utg11_pilon exonerate:protein2genome:local gene 167701 168696 1505 - . gene_id 0 ; sequence GL50803_8692-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 167701 168696 . - . utg11_pilon exonerate:protein2genome:local exon 167701 168696 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 167701 168696 1505 - . alignment_id 0 ; Query GL50803_8692-t26_1-p1 ; Align 168697 1 564 ; Align 168130 189 429 utg11_pilon exonerate:protein2genome:local gene 442951 444045 1111 + . gene_id 0 ; sequence GL50803_86933-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 442951 444045 . + . utg11_pilon exonerate:protein2genome:local exon 442951 444045 . + . insertions 9 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 442951 444045 1111 + . alignment_id 0 ; Query GL50803_86933-t26_1-p1 ; Align 442951 1 771 ; Align 443725 258 33 ; Align 443764 269 282 utg11_pilon exonerate:protein2genome:local gene 275806 276708 1150 + . gene_id 0 ; sequence GL50803_86934-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 275806 276708 . + . utg11_pilon exonerate:protein2genome:local exon 275806 276708 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 275806 276708 1150 + . alignment_id 0 ; Query GL50803_86934-t26_1-p1 ; Align 275806 7 381 ; Align 276187 135 522 utg64_pilon exonerate:protein2genome:local gene 550341 550514 135 + . gene_id 0 ; sequence GL50803_86937-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 550341 550514 . + . utg64_pilon exonerate:protein2genome:local exon 550341 550514 . + . insertions 6 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 550341 550514 135 + . alignment_id 0 ; Query GL50803_86937-t26_1-p1 ; Align 550341 7 63 ; Align 550407 28 21 ; Align 550431 35 84 utg308_pilon exonerate:protein2genome:local gene 609708 609902 135 - . gene_id 0 ; sequence GL50803_86937-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 609708 609902 . - . utg308_pilon exonerate:protein2genome:local exon 609708 609902 . - . insertions 6 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 609708 609902 135 - . alignment_id 0 ; Query GL50803_86937-t26_1-p1 ; Align 609903 7 63 ; Align 609837 28 21 ; Align 609813 35 105 utg11_pilon exonerate:protein2genome:local gene 465402 471461 7873 + . gene_id 0 ; sequence GL50803_86945-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 465402 469842 . + . utg11_pilon exonerate:protein2genome:local exon 465402 469842 . + . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 469843 469844 . + . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 469843 469872 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 469871 469872 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 469873 471461 . + . utg11_pilon exonerate:protein2genome:local exon 469873 471461 . + . insertions 15 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 465402 471461 7873 + . alignment_id 0 ; Query GL50803_86945-t26_1-p1 ; Align 465402 2 972 ; Align 466374 327 2070 ; Align 468447 1017 1395 ; Align 469875 1485 954 ; Align 470832 1803 519 ; Align 471363 1976 99 utg11_pilon exonerate:protein2genome:local gene 927194 927475 285 - . gene_id 0 ; sequence GL50803_86952-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 927194 927475 . - . utg11_pilon exonerate:protein2genome:local exon 927194 927475 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 927194 927475 285 - . alignment_id 0 ; Query GL50803_86952-t26_1-p1 ; Align 927476 1 282 utg11_pilon exonerate:protein2genome:local gene 229874 230104 174 - . gene_id 0 ; sequence GL50803_86994-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 229874 230104 . - . utg11_pilon exonerate:protein2genome:local exon 229874 230104 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 229874 230104 174 - . alignment_id 0 ; Query GL50803_86994-t26_1-p1 ; Align 230105 1 231 utg11_pilon exonerate:protein2genome:local gene 1491439 1493637 3357 + . gene_id 0 ; sequence GL50803_8702-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1491439 1493637 . + . utg11_pilon exonerate:protein2genome:local exon 1491439 1493637 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1491439 1493637 3357 + . alignment_id 0 ; Query GL50803_8702-t26_1-p1 ; Align 1491439 1 2199 utg11_pilon exonerate:protein2genome:local gene 202606 209874 10513 + . gene_id 0 ; sequence GL50803_87022-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 202606 209874 . + . utg11_pilon exonerate:protein2genome:local exon 202606 209874 . + . insertions 18 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 202606 209874 10513 + . alignment_id 0 ; Query GL50803_87022-t26_1-p1 ; Align 202606 1 381 ; Align 202990 128 402 ; Align 203398 262 12 ; Align 203413 266 1947 ; Align 205363 915 3318 ; Align 208684 2021 1191 utg11_pilon exonerate:protein2genome:local gene 201366 201653 298 + . gene_id 0 ; sequence GL50803_87023-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 201366 201653 . + . utg11_pilon exonerate:protein2genome:local exon 201366 201653 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 201366 201653 298 + . alignment_id 0 ; Query GL50803_87023-t26_1-p1 ; Align 201366 1 288 utg11_pilon exonerate:protein2genome:local gene 200543 200806 248 + . gene_id 0 ; sequence GL50803_87024-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 200543 200806 . + . utg11_pilon exonerate:protein2genome:local exon 200543 200806 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 200543 200806 248 + . alignment_id 0 ; Query GL50803_87024-t26_1-p1 ; Align 200543 1 264 utg11_pilon exonerate:protein2genome:local gene 250249 250458 295 - . gene_id 0 ; sequence GL50803_87036-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 250249 250458 . - . utg11_pilon exonerate:protein2genome:local exon 250249 250458 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 250249 250458 295 - . alignment_id 0 ; Query GL50803_87036-t26_1-p1 ; Align 250459 2 210 utg11_pilon exonerate:protein2genome:local gene 183313 183588 211 - . gene_id 0 ; sequence GL50803_87037-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 183313 183588 . - . utg11_pilon exonerate:protein2genome:local exon 183313 183588 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 183313 183588 211 - . alignment_id 0 ; Query GL50803_87037-t26_1-p1 ; Align 183589 1 195 ; Align 183394 67 81 utg11_pilon exonerate:protein2genome:local gene 180038 189274 13358 - . gene_id 0 ; sequence GL50803_87039-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 180038 189274 . - . utg11_pilon exonerate:protein2genome:local exon 180038 189274 . - . insertions 9 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 180038 189274 13358 - . alignment_id 0 ; Query GL50803_87039-t26_1-p1 ; Align 189275 1 945 ; Align 188330 317 1467 ; Align 186857 806 2202 ; Align 184652 1540 1257 ; Align 183395 1960 1530 ; Align 181865 2471 636 ; Align 181229 2684 1191 utg11_pilon exonerate:protein2genome:local gene 1494779 1495795 1157 + . gene_id 0 ; sequence GL50803_8704-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1494779 1495795 . + . utg11_pilon exonerate:protein2genome:local exon 1494779 1495795 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1494779 1495795 1157 + . alignment_id 0 ; Query GL50803_8704-t26_1-p1 ; Align 1494779 6 1017 utg11_pilon exonerate:protein2genome:local gene 1495792 1497006 1597 - . gene_id 0 ; sequence GL50803_8705-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1495792 1497006 . - . utg11_pilon exonerate:protein2genome:local exon 1495792 1497006 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1495792 1497006 1597 - . alignment_id 0 ; Query GL50803_8705-t26_1-p1 ; Align 1497007 1 1215 utg349_pilon exonerate:protein2genome:local gene 422470 428739 7718 - . gene_id 0 ; sequence GL50803_87056-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 422470 428739 . - . utg349_pilon exonerate:protein2genome:local exon 422470 428739 . - . insertions 0 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 422470 428739 7718 - . alignment_id 0 ; Query GL50803_87056-t26_1-p1 ; Align 428740 1 873 ; Align 427867 294 1020 ; Align 426847 636 1185 ; Align 425662 1032 336 ; Align 425326 1145 2856 utg349_pilon exonerate:protein2genome:local gene 428784 430271 2139 + . gene_id 0 ; sequence GL50803_87058-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 428784 430271 . + . utg349_pilon exonerate:protein2genome:local exon 428784 430271 . + . insertions 6 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 428784 430271 2139 + . alignment_id 0 ; Query GL50803_87058-t26_1-p1 ; Align 428784 1 936 ; Align 429726 313 546 utg11_pilon exonerate:protein2genome:local gene 1499069 1499710 1051 - . gene_id 0 ; sequence GL50803_8707-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1499069 1499710 . - . utg11_pilon exonerate:protein2genome:local exon 1499069 1499710 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1499069 1499710 1051 - . alignment_id 0 ; Query GL50803_8707-t26_1-p1 ; Align 1499711 1 642 utg11_pilon exonerate:protein2genome:local gene 1499759 1500235 781 + . gene_id 0 ; sequence GL50803_8708-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1499759 1500235 . + . utg11_pilon exonerate:protein2genome:local exon 1499759 1500235 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1499759 1500235 781 + . alignment_id 0 ; Query GL50803_8708-t26_1-p1 ; Align 1499759 1 423 ; Align 1500182 143 54 utg349_pilon exonerate:protein2genome:local gene 420173 420400 230 - . gene_id 0 ; sequence GL50803_87092-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 420173 420400 . - . utg349_pilon exonerate:protein2genome:local exon 420173 420400 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 420173 420400 230 - . alignment_id 0 ; Query GL50803_87092-t26_1-p1 ; Align 420401 1 228 utg11_pilon exonerate:protein2genome:local gene 1500792 1501757 1130 + . gene_id 0 ; sequence GL50803_8711-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1500792 1501757 . + . utg11_pilon exonerate:protein2genome:local exon 1500792 1501757 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1500792 1501757 1130 + . alignment_id 0 ; Query GL50803_8711-t26_1-p1 ; Align 1500792 2 966 utg731_pilon exonerate:protein2genome:local gene 1343398 1343682 217 - . gene_id 0 ; sequence GL50803_87110-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1343398 1343682 . - . utg731_pilon exonerate:protein2genome:local exon 1343398 1343682 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1343398 1343682 217 - . alignment_id 0 ; Query GL50803_87110-t26_1-p1 ; Align 1343683 193 285 utg349_pilon exonerate:protein2genome:local gene 417455 422455 6747 + . gene_id 0 ; sequence GL50803_87112-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 417455 422455 . + . utg349_pilon exonerate:protein2genome:local exon 417455 422455 . + . insertions 9 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 417455 422455 6747 + . alignment_id 0 ; Query GL50803_87112-t26_1-p1 ; Align 417455 1 255 ; Align 417713 86 1674 ; Align 419390 644 345 ; Align 419735 760 195 ; Align 419933 825 195 ; Align 420128 893 2328 utg11_pilon exonerate:protein2genome:local gene 1503520 1506114 3838 + . gene_id 0 ; sequence GL50803_8713-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1503520 1506114 . + . utg11_pilon exonerate:protein2genome:local exon 1503520 1506114 . + . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1503520 1506114 3838 + . alignment_id 0 ; Query GL50803_8713-t26_1-p1 ; Align 1503520 1 1380 ; Align 1504906 461 1209 utg64_pilon exonerate:protein2genome:local gene 731660 731896 199 - . gene_id 0 ; sequence GL50803_87137-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 731660 731896 . - . utg64_pilon exonerate:protein2genome:local exon 731660 731896 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 731660 731896 199 - . alignment_id 0 ; Query GL50803_87137-t26_1-p1 ; Align 731897 1 237 utg64_pilon exonerate:protein2genome:local gene 741843 743632 2682 - . gene_id 0 ; sequence GL50803_87149-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 741843 743632 . - . utg64_pilon exonerate:protein2genome:local exon 741843 743632 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 741843 743632 2682 - . alignment_id 0 ; Query GL50803_87149-t26_1-p1 ; Align 743633 1 1638 ; Align 741993 548 150 utg11_pilon exonerate:protein2genome:local gene 1509655 1510845 1591 + . gene_id 0 ; sequence GL50803_8716-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1509655 1510845 . + . utg11_pilon exonerate:protein2genome:local exon 1509655 1510845 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1509655 1510845 1591 + . alignment_id 0 ; Query GL50803_8716-t26_1-p1 ; Align 1509655 14 867 ; Align 1510525 303 321 utg11_pilon exonerate:protein2genome:local gene 328087 328293 118 - . gene_id 0 ; sequence GL50803_87161-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 328087 328293 . - . utg11_pilon exonerate:protein2genome:local exon 328087 328293 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 328087 328293 118 - . alignment_id 0 ; Query GL50803_87161-t26_1-p1 ; Align 328294 65 207 utg64_pilon exonerate:protein2genome:local gene 958020 958214 120 + . gene_id 0 ; sequence GL50803_87175-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 958020 958214 . + . utg64_pilon exonerate:protein2genome:local exon 958020 958214 . + . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 958020 958214 120 + . alignment_id 0 ; Query GL50803_87175-t26_1-p1 ; Align 958020 2 93 ; Align 958113 34 24 ; Align 958137 43 78 utg64_pilon exonerate:protein2genome:local gene 968644 969084 457 + . gene_id 0 ; sequence GL50803_87181-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 968644 969084 . + . utg64_pilon exonerate:protein2genome:local exon 968644 969084 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 968644 969084 457 + . alignment_id 0 ; Query GL50803_87181-t26_1-p1 ; Align 968644 1 441 utg265_pilon exonerate:protein2genome:local gene 857961 858122 113 + . gene_id 0 ; sequence GL50803_8720-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 857961 858122 . + . utg265_pilon exonerate:protein2genome:local exon 857961 858122 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 857961 858122 113 + . alignment_id 0 ; Query GL50803_8720-t26_1-p1 ; Align 857961 1 162 utg64_pilon exonerate:protein2genome:local gene 875619 877670 3412 + . gene_id 0 ; sequence GL50803_87202-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 875619 877670 . + . utg64_pilon exonerate:protein2genome:local exon 875619 877670 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 875619 877670 3412 + . alignment_id 0 ; Query GL50803_87202-t26_1-p1 ; Align 875619 5 2052 utg64_pilon exonerate:protein2genome:local gene 879001 881790 3709 - . gene_id 0 ; sequence GL50803_87205-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 879001 881790 . - . utg64_pilon exonerate:protein2genome:local exon 879001 881790 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 879001 881790 3709 - . alignment_id 0 ; Query GL50803_87205-t26_1-p1 ; Align 881791 1 2790 utg64_pilon exonerate:protein2genome:local gene 882795 884522 2484 - . gene_id 0 ; sequence GL50803_87208-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 882795 884522 . - . utg64_pilon exonerate:protein2genome:local exon 882795 884522 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 882795 884522 2484 - . alignment_id 0 ; Query GL50803_87208-t26_1-p1 ; Align 884523 1 972 ; Align 883548 325 753 utg265_pilon exonerate:protein2genome:local gene 855060 856643 2185 + . gene_id 0 ; sequence GL50803_8722-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 855060 856643 . + . utg265_pilon exonerate:protein2genome:local exon 855060 856643 . + . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 855060 856643 2185 + . alignment_id 0 ; Query GL50803_8722-t26_1-p1 ; Align 855060 1 579 ; Align 855639 195 315 ; Align 855954 301 690 utg64_pilon exonerate:protein2genome:local gene 907951 908391 383 - . gene_id 0 ; sequence GL50803_87234-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 907951 908391 . - . utg64_pilon exonerate:protein2genome:local exon 907951 908391 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 907951 908391 383 - . alignment_id 0 ; Query GL50803_87234-t26_1-p1 ; Align 908392 3 441 utg265_pilon exonerate:protein2genome:local gene 852444 853847 1688 - . gene_id 0 ; sequence GL50803_8725-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 852444 853847 . - . utg265_pilon exonerate:protein2genome:local exon 852444 853847 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 852444 853847 1688 - . alignment_id 0 ; Query GL50803_8725-t26_1-p1 ; Align 853848 1 465 ; Align 853383 157 939 utg265_pilon exonerate:protein2genome:local gene 849424 852333 4362 - . gene_id 0 ; sequence GL50803_8726-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 849424 852333 . - . utg265_pilon exonerate:protein2genome:local exon 849424 852333 . - . insertions 9 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 849424 852333 4362 - . alignment_id 0 ; Query GL50803_8726-t26_1-p1 ; Align 852334 1 1086 ; Align 851239 363 1767 ; Align 849472 953 48 utg64_pilon exonerate:protein2genome:local gene 931921 932610 1018 - . gene_id 0 ; sequence GL50803_87261-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 931921 932610 . - . utg64_pilon exonerate:protein2genome:local exon 931921 932610 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 931921 932610 1018 - . alignment_id 0 ; Query GL50803_87261-t26_1-p1 ; Align 932611 1 690 utg265_pilon exonerate:protein2genome:local gene 847504 849297 2123 - . gene_id 0 ; sequence GL50803_8727-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 848125 849297 . - . utg265_pilon exonerate:protein2genome:local exon 848125 849297 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 848123 848124 . - . intron_id 1 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 848065 848124 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 848065 848066 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 847504 848064 . - . utg265_pilon exonerate:protein2genome:local exon 847504 848064 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 847504 849297 2123 - . alignment_id 0 ; Query GL50803_8727-t26_1-p1 ; Align 849298 1 1173 ; Align 848065 392 471 ; Align 847594 550 90 utg47_pilon exonerate:protein2genome:local gene 2222435 2222671 146 + . gene_id 0 ; sequence GL50803_87298-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2222435 2222671 . + . utg47_pilon exonerate:protein2genome:local exon 2222435 2222671 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2222435 2222671 146 + . alignment_id 0 ; Query GL50803_87298-t26_1-p1 ; Align 2222435 1 237 utg265_pilon exonerate:protein2genome:local gene 843814 844443 882 - . gene_id 0 ; sequence GL50803_8731-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 843814 844443 . - . utg265_pilon exonerate:protein2genome:local exon 843814 844443 . - . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 843814 844443 882 - . alignment_id 0 ; Query GL50803_8731-t26_1-p1 ; Align 844444 1 471 ; Align 843970 158 156 utg47_pilon exonerate:protein2genome:local gene 2200842 2201069 194 - . gene_id 0 ; sequence GL50803_87313-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2200842 2201069 . - . utg47_pilon exonerate:protein2genome:local exon 2200842 2201069 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2200842 2201069 194 - . alignment_id 0 ; Query GL50803_87313-t26_1-p1 ; Align 2201070 1 228 utg47_pilon exonerate:protein2genome:local gene 2200412 2200681 351 - . gene_id 0 ; sequence GL50803_87315-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2200412 2200681 . - . utg47_pilon exonerate:protein2genome:local exon 2200412 2200681 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2200412 2200681 351 - . alignment_id 0 ; Query GL50803_87315-t26_1-p1 ; Align 2200682 1 270 utg47_pilon exonerate:protein2genome:local gene 2190609 2190887 222 - . gene_id 0 ; sequence GL50803_87323-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2190609 2190887 . - . utg47_pilon exonerate:protein2genome:local exon 2190609 2190887 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2190609 2190887 222 - . alignment_id 0 ; Query GL50803_87323-t26_1-p1 ; Align 2190888 1 243 ; Align 2190642 82 33 utg265_pilon exonerate:protein2genome:local gene 841132 843792 3831 + . gene_id 0 ; sequence GL50803_8733-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 841132 843792 . + . utg265_pilon exonerate:protein2genome:local exon 841132 843792 . + . insertions 6 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 841132 843792 3831 + . alignment_id 0 ; Query GL50803_8733-t26_1-p1 ; Align 841132 1 498 ; Align 841633 167 1536 ; Align 843172 679 621 utg47_pilon exonerate:protein2genome:local gene 2239497 2239793 358 - . gene_id 0 ; sequence GL50803_87332-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2239497 2239793 . - . utg47_pilon exonerate:protein2genome:local exon 2239497 2239793 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2239497 2239793 358 - . alignment_id 0 ; Query GL50803_87332-t26_1-p1 ; Align 2239794 1 297 utg47_pilon exonerate:protein2genome:local gene 2051895 2052089 153 + . gene_id 0 ; sequence GL50803_87342-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2051895 2052089 . + . utg47_pilon exonerate:protein2genome:local exon 2051895 2052089 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2051895 2052089 153 + . alignment_id 0 ; Query GL50803_87342-t26_1-p1 ; Align 2051895 1 195 utg47_pilon exonerate:protein2genome:local gene 2038248 2038454 224 - . gene_id 0 ; sequence GL50803_87356-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2038248 2038454 . - . utg47_pilon exonerate:protein2genome:local exon 2038248 2038454 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2038248 2038454 224 - . alignment_id 0 ; Query GL50803_87356-t26_1-p1 ; Align 2038455 3 207 utg47_pilon exonerate:protein2genome:local gene 2033977 2043729 10568 + . gene_id 0 ; sequence GL50803_87358-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2033977 2043729 . + . utg47_pilon exonerate:protein2genome:local exon 2033977 2043729 . + . insertions 3 ; deletions 12 utg47_pilon exonerate:protein2genome:local similarity 2033977 2043729 10568 + . alignment_id 0 ; Query GL50803_87358-t26_1-p1 ; Align 2033977 1 1620 ; Align 2035597 542 672 ; Align 2036272 766 186 ; Align 2036458 831 1578 ; Align 2038036 1358 1368 ; Align 2039404 1815 648 ; Align 2040052 2032 1353 ; Align 2041405 2486 1476 ; Align 2042881 2980 849 utg265_pilon exonerate:protein2genome:local gene 836955 838937 2658 + . gene_id 0 ; sequence GL50803_8738-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 836955 838937 . + . utg265_pilon exonerate:protein2genome:local exon 836955 838937 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 836955 838937 2658 + . alignment_id 0 ; Query GL50803_8738-t26_1-p1 ; Align 836955 1 1983 utg11_pilon exonerate:protein2genome:local gene 870875 872560 2767 + . gene_id 0 ; sequence GL50803_8741-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 870875 872560 . + . utg11_pilon exonerate:protein2genome:local exon 870875 872560 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 870875 872560 2767 + . alignment_id 0 ; Query GL50803_8741-t26_1-p1 ; Align 870875 1 1209 ; Align 872087 404 474 utg11_pilon exonerate:protein2genome:local gene 870020 870829 1219 + . gene_id 0 ; sequence GL50803_8742-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 870020 870829 . + . utg11_pilon exonerate:protein2genome:local exon 870020 870829 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 870020 870829 1219 + . alignment_id 0 ; Query GL50803_8742-t26_1-p1 ; Align 870020 1 765 ; Align 870785 257 45 utg47_pilon exonerate:protein2genome:local gene 2105389 2110302 5345 + . gene_id 0 ; sequence GL50803_87422-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 2105389 2110115 . + . utg47_pilon exonerate:protein2genome:local exon 2105389 2110115 . + . insertions 6 ; deletions 2 utg47_pilon exonerate:protein2genome:local splice5 2110116 2110117 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 2110116 2110151 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 2110150 2110151 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 2110152 2110302 . + . utg47_pilon exonerate:protein2genome:local exon 2110152 2110302 . + . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 2105389 2110302 5345 + . alignment_id 0 ; Query GL50803_87422-t26_1-p1 ; Align 2105389 1 1560 ; Align 2106952 521 1572 ; Align 2108527 1045 1317 ; Align 2109844 1486 270 ; Align 2110153 1577 12 ; Align 2110165 1584 138 utg11_pilon exonerate:protein2genome:local gene 868523 869560 1411 - . gene_id 0 ; sequence GL50803_8744-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 868523 869560 . - . utg11_pilon exonerate:protein2genome:local exon 868523 869560 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 868523 869560 1411 - . alignment_id 0 ; Query GL50803_8744-t26_1-p1 ; Align 869561 1 1038 utg47_pilon exonerate:protein2genome:local gene 2163675 2166545 4421 + . gene_id 0 ; sequence GL50803_87446-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2163675 2166545 . + . utg47_pilon exonerate:protein2genome:local exon 2163675 2166545 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2163675 2166545 4421 + . alignment_id 0 ; Query GL50803_87446-t26_1-p1 ; Align 2163675 1 2871 utg11_pilon exonerate:protein2genome:local gene 863602 867843 5821 + . gene_id 0 ; sequence GL50803_8745-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 863602 867843 . + . utg11_pilon exonerate:protein2genome:local exon 863602 867843 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 863602 867843 5821 + . alignment_id 0 ; Query GL50803_8745-t26_1-p1 ; Align 863602 1 4242 utg47_pilon exonerate:protein2genome:local gene 2070273 2070494 267 + . gene_id 0 ; sequence GL50803_87451-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2070273 2070494 . + . utg47_pilon exonerate:protein2genome:local exon 2070273 2070494 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2070273 2070494 267 + . alignment_id 0 ; Query GL50803_87451-t26_1-p1 ; Align 2070273 1 222 utg47_pilon exonerate:protein2genome:local gene 1854678 1855526 1152 - . gene_id 0 ; sequence GL50803_87461-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1854678 1855526 . - . utg47_pilon exonerate:protein2genome:local exon 1854678 1855526 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1854678 1855526 1152 - . alignment_id 0 ; Query GL50803_87461-t26_1-p1 ; Align 1855527 343 849 utg99_pilon exonerate:protein2genome:local gene 419476 420000 458 + . gene_id 0 ; sequence GL50803_87471-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 419476 420000 . + . utg99_pilon exonerate:protein2genome:local exon 419476 420000 . + . insertions 3 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 419476 420000 458 + . alignment_id 0 ; Query GL50803_87471-t26_1-p1 ; Align 419476 5 51 ; Align 419527 23 240 ; Align 419770 103 231 utg99_pilon exonerate:protein2genome:local gene 418659 421085 2533 - . gene_id 0 ; sequence GL50803_87472-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 418659 421085 . - . utg99_pilon exonerate:protein2genome:local exon 418659 421085 . - . insertions 3 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 418659 421085 2533 - . alignment_id 0 ; Query GL50803_87472-t26_1-p1 ; Align 421086 705 1302 ; Align 419781 1139 264 ; Align 419517 1228 858 utg99_pilon exonerate:protein2genome:local gene 394600 395202 795 + . gene_id 0 ; sequence GL50803_87492-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 394600 395202 . + . utg99_pilon exonerate:protein2genome:local exon 394600 395202 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 394600 395202 795 + . alignment_id 0 ; Query GL50803_87492-t26_1-p1 ; Align 394600 1 603 utg47_pilon exonerate:protein2genome:local gene 1863602 1863793 156 - . gene_id 0 ; sequence GL50803_87497-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1863602 1863793 . - . utg47_pilon exonerate:protein2genome:local exon 1863602 1863793 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1863602 1863793 156 - . alignment_id 0 ; Query GL50803_87497-t26_1-p1 ; Align 1863794 1 192 utg11_pilon exonerate:protein2genome:local gene 956064 956360 311 - . gene_id 0 ; sequence GL50803_87510-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 956064 956360 . - . utg11_pilon exonerate:protein2genome:local exon 956064 956360 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 956064 956360 311 - . alignment_id 0 ; Query GL50803_87510-t26_1-p1 ; Align 956361 1 297 utg212_pilon exonerate:protein2genome:local gene 127563 128120 743 + . gene_id 0 ; sequence GL50803_87519-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 127563 128120 . + . utg212_pilon exonerate:protein2genome:local exon 127563 128120 . + . insertions 3 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 127563 128120 743 + . alignment_id 0 ; Query GL50803_87519-t26_1-p1 ; Align 127563 1 33 ; Align 127599 12 522 utg47_pilon exonerate:protein2genome:local gene 817352 817573 219 - . gene_id 0 ; sequence GL50803_87523-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 817352 817573 . - . utg47_pilon exonerate:protein2genome:local exon 817352 817573 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 817352 817573 219 - . alignment_id 0 ; Query GL50803_87523-t26_1-p1 ; Align 817574 1 222 utg11_pilon exonerate:protein2genome:local gene 163808 164713 1310 - . gene_id 0 ; sequence GL50803_87577-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 163808 164713 . - . utg11_pilon exonerate:protein2genome:local exon 163808 164713 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 163808 164713 1310 - . alignment_id 0 ; Query GL50803_87577-t26_1-p1 ; Align 164714 1 906 utg349_pilon exonerate:protein2genome:local gene 1223531 1638874 1802 + . gene_id 0 ; sequence GL50803_87628-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1223531 1223815 . + . utg349_pilon exonerate:protein2genome:local exon 1223531 1223815 . + . insertions 3 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1223816 1223817 . + . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 1223816 1236741 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1236740 1236741 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1236742 1236973 . + . utg349_pilon exonerate:protein2genome:local exon 1236742 1236973 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1236974 1236975 . + . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1236974 1376402 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1376401 1376402 . + . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 1376403 1376576 . + . utg349_pilon exonerate:protein2genome:local exon 1376403 1376576 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local splice5 1376577 1376578 . + . intron_id 3 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1376577 1518215 . + . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 1518214 1518215 . + . intron_id 2 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1518216 1518257 . + . utg349_pilon exonerate:protein2genome:local exon 1518216 1518257 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1518258 1518259 . + . intron_id 4 ; splice_site "GA" utg349_pilon exonerate:protein2genome:local intron 1518258 1636631 . + . intron_id 4 utg349_pilon exonerate:protein2genome:local splice3 1636630 1636631 . + . intron_id 3 ; splice_site "TG" utg349_pilon exonerate:protein2genome:local cds 1636632 1637625 . + . utg349_pilon exonerate:protein2genome:local exon 1636632 1637625 . + . insertions 18 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1637626 1637627 . + . intron_id 5 ; splice_site "CT" utg349_pilon exonerate:protein2genome:local intron 1637626 1638744 . + . intron_id 5 utg349_pilon exonerate:protein2genome:local splice3 1638743 1638744 . + . intron_id 4 ; splice_site "CG" utg349_pilon exonerate:protein2genome:local cds 1638745 1638874 . + . utg349_pilon exonerate:protein2genome:local exon 1638745 1638874 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1223531 1638874 1802 + . alignment_id 0 ; Query GL50803_87628-t26_1-p1 ; Align 1223531 1 57 ; Align 1223591 20 153 ; Align 1223744 72 72 ; Align 1236742 96 231 ; Align 1376405 174 99 ; Align 1376504 209 72 ; Align 1518218 234 39 ; Align 1636634 248 351 ; Align 1636988 365 48 ; Align 1637042 381 150 ; Align 1637198 431 30 ; Align 1637231 441 336 ; Align 1637567 554 57 ; Align 1638746 574 129 utg64_pilon exonerate:protein2genome:local gene 56994 59921 4525 - . gene_id 0 ; sequence GL50803_87677-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 56994 59921 . - . utg64_pilon exonerate:protein2genome:local exon 56994 59921 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 56994 59921 4525 - . alignment_id 0 ; Query GL50803_87677-t26_1-p1 ; Align 59922 225 2928 utg64_pilon exonerate:protein2genome:local gene 54147 54350 197 + . gene_id 0 ; sequence GL50803_87683-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 54147 54350 . + . utg64_pilon exonerate:protein2genome:local exon 54147 54350 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 54147 54350 197 + . alignment_id 0 ; Query GL50803_87683-t26_1-p1 ; Align 54147 1 204 utg47_pilon exonerate:protein2genome:local gene 1169078 1169158 119 + . gene_id 0 ; sequence GL50803_8769-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1169078 1169158 . + . utg47_pilon exonerate:protein2genome:local exon 1169078 1169158 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1169078 1169158 119 + . alignment_id 0 ; Query GL50803_8769-t26_1-p1 ; Align 1169078 20 81 utg47_pilon exonerate:protein2genome:local gene 1168276 1169046 1219 + . gene_id 0 ; sequence GL50803_8770-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1168276 1169046 . + . utg47_pilon exonerate:protein2genome:local exon 1168276 1169046 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1168276 1169046 1219 + . alignment_id 0 ; Query GL50803_8770-t26_1-p1 ; Align 1168276 1 771 utg308_pilon exonerate:protein2genome:local gene 78955 80010 1441 - . gene_id 0 ; sequence GL50803_87706-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 78955 80010 . - . utg308_pilon exonerate:protein2genome:local exon 78955 80010 . - . insertions 12 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 78955 80010 1441 - . alignment_id 0 ; Query GL50803_87706-t26_1-p1 ; Align 80011 1 162 ; Align 79846 55 126 ; Align 79717 97 27 ; Align 79687 106 657 ; Align 79027 325 72 utg47_pilon exonerate:protein2genome:local gene 1167756 1168247 664 + . gene_id 0 ; sequence GL50803_8771-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1167756 1168247 . + . utg47_pilon exonerate:protein2genome:local exon 1167756 1168247 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1167756 1168247 664 + . alignment_id 0 ; Query GL50803_8771-t26_1-p1 ; Align 1167756 8 492 utg47_pilon exonerate:protein2genome:local gene 1167399 1167506 132 + . gene_id 0 ; sequence GL50803_8772-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1167399 1167506 . + . utg47_pilon exonerate:protein2genome:local exon 1167399 1167506 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1167399 1167506 132 + . alignment_id 0 ; Query GL50803_8772-t26_1-p1 ; Align 1167399 1 108 utg349_pilon exonerate:protein2genome:local gene 751921 752184 285 - . gene_id 0 ; sequence GL50803_87720-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 751921 752184 . - . utg349_pilon exonerate:protein2genome:local exon 751921 752184 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 751921 752184 285 - . alignment_id 0 ; Query GL50803_87720-t26_1-p1 ; Align 752185 2 264 utg349_pilon exonerate:protein2genome:local gene 692852 693073 163 + . gene_id 0 ; sequence GL50803_87772-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 692852 693073 . + . utg349_pilon exonerate:protein2genome:local exon 692852 693073 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 692852 693073 163 + . alignment_id 0 ; Query GL50803_87772-t26_1-p1 ; Align 692852 5 222 utg349_pilon exonerate:protein2genome:local gene 691550 693406 2113 - . gene_id 0 ; sequence GL50803_87774-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 691550 693406 . - . utg349_pilon exonerate:protein2genome:local exon 691550 693406 . - . insertions 3 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 691550 693406 2113 - . alignment_id 0 ; Query GL50803_87774-t26_1-p1 ; Align 693407 1 927 ; Align 692477 310 90 ; Align 692387 341 195 ; Align 692192 408 642 utg349_pilon exonerate:protein2genome:local gene 708001 708288 245 + . gene_id 0 ; sequence GL50803_87793-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 708001 708288 . + . utg349_pilon exonerate:protein2genome:local exon 708001 708288 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 708001 708288 245 + . alignment_id 0 ; Query GL50803_87793-t26_1-p1 ; Align 708001 1 288 utg47_pilon exonerate:protein2genome:local gene 1154556 1155281 1100 - . gene_id 0 ; sequence GL50803_8781-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1154556 1155281 . - . utg47_pilon exonerate:protein2genome:local exon 1154556 1155281 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1154556 1155281 1100 - . alignment_id 0 ; Query GL50803_8781-t26_1-p1 ; Align 1155282 1 726 utg349_pilon exonerate:protein2genome:local gene 728076 730433 3641 - . gene_id 0 ; sequence GL50803_87817-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 728076 730433 . - . utg349_pilon exonerate:protein2genome:local exon 728076 730433 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 728076 730433 3641 - . alignment_id 0 ; Query GL50803_87817-t26_1-p1 ; Align 730434 755 2358 utg47_pilon exonerate:protein2genome:local gene 1152738 1154429 2345 + . gene_id 0 ; sequence GL50803_8782-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1152738 1154429 . + . utg47_pilon exonerate:protein2genome:local exon 1152738 1154429 . + . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 1152738 1154429 2345 + . alignment_id 0 ; Query GL50803_8782-t26_1-p1 ; Align 1152738 1 1065 ; Align 1153803 357 90 ; Align 1153893 388 27 ; Align 1153920 400 510 utg349_pilon exonerate:protein2genome:local gene 733353 735947 2855 - . gene_id 0 ; sequence GL50803_87826-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 734187 735947 . - . utg349_pilon exonerate:protein2genome:local exon 734187 735947 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local splice5 734185 734186 . - . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 734130 734186 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 734130 734131 . - . intron_id 0 ; splice_site "TG" utg349_pilon exonerate:protein2genome:local cds 733353 734129 . - . utg349_pilon exonerate:protein2genome:local exon 733353 734129 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 733353 735947 2855 - . alignment_id 0 ; Query GL50803_87826-t26_1-p1 ; Align 735948 1 465 ; Align 735483 159 1296 ; Align 734130 591 456 ; Align 733671 743 318 utg349_pilon exonerate:protein2genome:local gene 680144 681133 1579 + . gene_id 0 ; sequence GL50803_8789-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 680144 681133 . + . utg349_pilon exonerate:protein2genome:local exon 680144 681133 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 680144 681133 1579 + . alignment_id 0 ; Query GL50803_8789-t26_1-p1 ; Align 680144 4 990 utg731_pilon exonerate:protein2genome:local gene 840554 841840 1913 - . gene_id 0 ; sequence GL50803_87926-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 840554 841840 . - . utg731_pilon exonerate:protein2genome:local exon 840554 841840 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 840554 841840 1913 - . alignment_id 0 ; Query GL50803_87926-t26_1-p1 ; Align 841841 1 1287 utg731_pilon exonerate:protein2genome:local gene 838998 840398 1761 + . gene_id 0 ; sequence GL50803_87928-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 838998 840398 . + . utg731_pilon exonerate:protein2genome:local exon 838998 840398 . + . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 838998 840398 1761 + . alignment_id 0 ; Query GL50803_87928-t26_1-p1 ; Align 838998 1 1308 ; Align 840312 437 87 utg349_pilon exonerate:protein2genome:local gene 681449 682009 832 + . gene_id 0 ; sequence GL50803_8794-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 681449 682009 . + . utg349_pilon exonerate:protein2genome:local exon 681449 682009 . + . insertions 12 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 681449 682009 832 + . alignment_id 0 ; Query GL50803_8794-t26_1-p1 ; Align 681449 1 375 ; Align 681836 126 174 utg731_pilon exonerate:protein2genome:local gene 820206 820403 213 - . gene_id 0 ; sequence GL50803_87944-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 820206 820403 . - . utg731_pilon exonerate:protein2genome:local exon 820206 820403 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 820206 820403 213 - . alignment_id 0 ; Query GL50803_87944-t26_1-p1 ; Align 820404 2 198 utg731_pilon exonerate:protein2genome:local gene 818746 825357 9212 + . gene_id 0 ; sequence GL50803_87945-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 818746 818812 . + . utg731_pilon exonerate:protein2genome:local exon 818746 818812 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 818813 818814 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 818813 818857 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 818856 818857 . + . intron_id 0 ; splice_site "GA" utg731_pilon exonerate:protein2genome:local cds 818858 825357 . + . utg731_pilon exonerate:protein2genome:local exon 818858 825357 . + . insertions 21 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 818746 825357 9212 + . alignment_id 0 ; Query GL50803_87945-t26_1-p1 ; Align 818746 247 66 ; Align 818860 270 252 ; Align 819115 354 4353 ; Align 823480 1805 18 ; Align 823504 1811 1854 utg731_pilon exonerate:protein2genome:local gene 796836 797030 164 - . gene_id 0 ; sequence GL50803_87955-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 796836 797030 . - . utg731_pilon exonerate:protein2genome:local exon 796836 797030 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 796836 797030 164 - . alignment_id 0 ; Query GL50803_87955-t26_1-p1 ; Align 797031 4 195 utg731_pilon exonerate:protein2genome:local gene 1049429 1051723 1989 + . gene_id 0 ; sequence GL50803_87970-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1049429 1049627 . + . utg731_pilon exonerate:protein2genome:local exon 1049429 1049627 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1049628 1049629 . + . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1049628 1049705 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1049704 1049705 . + . intron_id 0 ; splice_site "AA" utg731_pilon exonerate:protein2genome:local cds 1049706 1051353 . + . utg731_pilon exonerate:protein2genome:local exon 1049706 1051353 . + . insertions 0 ; deletions 3 utg731_pilon exonerate:protein2genome:local splice5 1051354 1051355 . + . intron_id 2 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local intron 1051354 1051383 . + . intron_id 2 utg731_pilon exonerate:protein2genome:local splice3 1051382 1051383 . + . intron_id 1 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1051384 1051723 . + . utg731_pilon exonerate:protein2genome:local exon 1051384 1051723 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1049429 1051723 1989 + . alignment_id 0 ; Query GL50803_87970-t26_1-p1 ; Align 1049429 468 198 ; Align 1049708 535 276 ; Align 1049984 629 813 ; Align 1050797 901 555 ; Align 1051385 1087 339 utg731_pilon exonerate:protein2genome:local gene 1037563 1037814 246 - . gene_id 0 ; sequence GL50803_87986-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1037563 1037814 . - . utg731_pilon exonerate:protein2genome:local exon 1037563 1037814 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1037563 1037814 246 - . alignment_id 0 ; Query GL50803_87986-t26_1-p1 ; Align 1037815 1 252 utg349_pilon exonerate:protein2genome:local gene 683712 684662 1266 - . gene_id 0 ; sequence GL50803_8799-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 683712 684662 . - . utg349_pilon exonerate:protein2genome:local exon 683712 684662 . - . insertions 12 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 683712 684662 1266 - . alignment_id 0 ; Query GL50803_8799-t26_1-p1 ; Align 684663 1 66 ; Align 684594 23 129 ; Align 684456 66 744 utg349_pilon exonerate:protein2genome:local gene 693666 696488 3541 + . gene_id 0 ; sequence GL50803_8803-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 693666 696488 . + . utg349_pilon exonerate:protein2genome:local exon 693666 696488 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 693666 696488 3541 + . alignment_id 0 ; Query GL50803_8803-t26_1-p1 ; Align 693666 1 2736 ; Align 696402 914 87 utg349_pilon exonerate:protein2genome:local gene 696452 697465 1367 - . gene_id 0 ; sequence GL50803_8804-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 696452 697465 . - . utg349_pilon exonerate:protein2genome:local exon 696452 697465 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 696452 697465 1367 - . alignment_id 0 ; Query GL50803_8804-t26_1-p1 ; Align 697466 6 1014 utg349_pilon exonerate:protein2genome:local gene 697501 700293 4516 - . gene_id 0 ; sequence GL50803_8805-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 697501 700293 . - . utg349_pilon exonerate:protein2genome:local exon 697501 700293 . - . insertions 18 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 697501 700293 4516 - . alignment_id 0 ; Query GL50803_8805-t26_1-p1 ; Align 700294 1 2445 ; Align 697837 816 270 ; Align 697561 906 60 utg731_pilon exonerate:protein2genome:local gene 1171143 1171310 188 + . gene_id 0 ; sequence GL50803_88053-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1171143 1171310 . + . utg731_pilon exonerate:protein2genome:local exon 1171143 1171310 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1171143 1171310 188 + . alignment_id 0 ; Query GL50803_88053-t26_1-p1 ; Align 1171143 18 168 utg731_pilon exonerate:protein2genome:local gene 1142395 1143312 934 + . gene_id 0 ; sequence GL50803_88059-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1142395 1143312 . + . utg731_pilon exonerate:protein2genome:local exon 1142395 1143312 . + . insertions 3 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1142395 1143312 934 + . alignment_id 0 ; Query GL50803_88059-t26_1-p1 ; Align 1142395 1 468 ; Align 1142863 158 66 ; Align 1142932 180 105 ; Align 1143037 216 276 utg731_pilon exonerate:protein2genome:local gene 1137667 1139514 2508 - . gene_id 0 ; sequence GL50803_88065-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1137667 1139514 . - . utg731_pilon exonerate:protein2genome:local exon 1137667 1139514 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1137667 1139514 2508 - . alignment_id 0 ; Query GL50803_88065-t26_1-p1 ; Align 1139515 3 1848 utg731_pilon exonerate:protein2genome:local gene 1126923 1129094 2916 + . gene_id 0 ; sequence GL50803_88071-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1126923 1129094 . + . utg731_pilon exonerate:protein2genome:local exon 1126923 1129094 . + . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1126923 1129094 2916 + . alignment_id 0 ; Query GL50803_88071-t26_1-p1 ; Align 1126923 1 720 ; Align 1127646 241 1449 utg731_pilon exonerate:protein2genome:local gene 1169992 1170246 208 + . gene_id 0 ; sequence GL50803_88072-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1169992 1170246 . + . utg731_pilon exonerate:protein2genome:local exon 1169992 1170246 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1169992 1170246 208 + . alignment_id 0 ; Query GL50803_88072-t26_1-p1 ; Align 1169992 1 255 utg731_pilon exonerate:protein2genome:local gene 1167949 1327800 4092 - . gene_id 0 ; sequence GL50803_88082-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1327444 1327800 . - . utg731_pilon exonerate:protein2genome:local exon 1327444 1327800 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1327442 1327443 . - . intron_id 1 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1170733 1327443 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1170733 1170734 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1167949 1170732 . - . utg731_pilon exonerate:protein2genome:local exon 1167949 1170732 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1167949 1327800 4092 - . alignment_id 0 ; Query GL50803_88082-t26_1-p1 ; Align 1327801 2 357 ; Align 1170733 121 1896 ; Align 1168834 753 885 utg47_pilon exonerate:protein2genome:local gene 698689 699558 1061 - . gene_id 0 ; sequence GL50803_8816-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 698689 699558 . - . utg47_pilon exonerate:protein2genome:local exon 698689 699558 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 698689 699558 1061 - . alignment_id 0 ; Query GL50803_8816-t26_1-p1 ; Align 699559 1 870 utg47_pilon exonerate:protein2genome:local gene 2287753 2288187 463 - . gene_id 0 ; sequence GL50803_88167-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2287753 2288187 . - . utg47_pilon exonerate:protein2genome:local exon 2287753 2288187 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2287753 2288187 463 - . alignment_id 0 ; Query GL50803_88167-t26_1-p1 ; Align 2288188 1 435 utg47_pilon exonerate:protein2genome:local gene 2293122 2293343 269 - . gene_id 0 ; sequence GL50803_88178-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2293122 2293343 . - . utg47_pilon exonerate:protein2genome:local exon 2293122 2293343 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2293122 2293343 269 - . alignment_id 0 ; Query GL50803_88178-t26_1-p1 ; Align 2293344 1 222 utg47_pilon exonerate:protein2genome:local gene 2296035 2296343 270 + . gene_id 0 ; sequence GL50803_88181-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2296035 2296343 . + . utg47_pilon exonerate:protein2genome:local exon 2296035 2296343 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2296035 2296343 270 + . alignment_id 0 ; Query GL50803_88181-t26_1-p1 ; Align 2296035 1 309 utg47_pilon exonerate:protein2genome:local gene 702844 703266 681 + . gene_id 0 ; sequence GL50803_8819-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 702844 703266 . + . utg47_pilon exonerate:protein2genome:local exon 702844 703266 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 702844 703266 681 + . alignment_id 0 ; Query GL50803_8819-t26_1-p1 ; Align 702844 5 423 utg47_pilon exonerate:protein2genome:local gene 703279 706350 3342 - . gene_id 0 ; sequence GL50803_8820-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 703279 706350 . - . utg47_pilon exonerate:protein2genome:local exon 703279 706350 . - . insertions 6 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 703279 706350 3342 - . alignment_id 0 ; Query GL50803_8820-t26_1-p1 ; Align 706351 1 876 ; Align 705475 294 774 ; Align 704701 553 1116 ; Align 703585 926 228 ; Align 703351 1002 72 utg47_pilon exonerate:protein2genome:local gene 706388 707074 933 - . gene_id 0 ; sequence GL50803_8821-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 706388 707074 . - . utg47_pilon exonerate:protein2genome:local exon 706388 707074 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 706388 707074 933 - . alignment_id 0 ; Query GL50803_8821-t26_1-p1 ; Align 707075 1 687 utg47_pilon exonerate:protein2genome:local gene 707177 708943 2939 + . gene_id 0 ; sequence GL50803_8822-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 707177 708943 . + . utg47_pilon exonerate:protein2genome:local exon 707177 708943 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 707177 708943 2939 + . alignment_id 0 ; Query GL50803_8822-t26_1-p1 ; Align 707177 1 1767 utg47_pilon exonerate:protein2genome:local gene 384267 387944 5784 - . gene_id 0 ; sequence GL50803_88245-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 384267 387944 . - . utg47_pilon exonerate:protein2genome:local exon 384267 387944 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 384267 387944 5784 - . alignment_id 0 ; Query GL50803_88245-t26_1-p1 ; Align 387945 1 3678 utg47_pilon exonerate:protein2genome:local gene 709987 711015 1625 + . gene_id 0 ; sequence GL50803_8826-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 709987 711015 . + . utg47_pilon exonerate:protein2genome:local exon 709987 711015 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 709987 711015 1625 + . alignment_id 0 ; Query GL50803_8826-t26_1-p1 ; Align 709987 1 1029 utg47_pilon exonerate:protein2genome:local gene 711074 712588 2299 - . gene_id 0 ; sequence GL50803_8827-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 711074 712588 . - . utg47_pilon exonerate:protein2genome:local exon 711074 712588 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 711074 712588 2299 - . alignment_id 0 ; Query GL50803_8827-t26_1-p1 ; Align 712589 1 1515 utg308_pilon exonerate:protein2genome:local gene 523994 524464 688 - . gene_id 0 ; sequence GL50803_88349-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 523994 524464 . - . utg308_pilon exonerate:protein2genome:local exon 523994 524464 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 523994 524464 688 - . alignment_id 0 ; Query GL50803_88349-t26_1-p1 ; Align 524465 14 471 utg308_pilon exonerate:protein2genome:local gene 477558 477746 175 - . gene_id 0 ; sequence GL50803_88357-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 477558 477746 . - . utg308_pilon exonerate:protein2genome:local exon 477558 477746 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 477558 477746 175 - . alignment_id 0 ; Query GL50803_88357-t26_1-p1 ; Align 477747 1 189 utg308_pilon exonerate:protein2genome:local gene 455390 457893 3172 + . gene_id 0 ; sequence GL50803_88369-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 455390 457893 . + . utg308_pilon exonerate:protein2genome:local exon 455390 457893 . + . insertions 0 ; deletions 9 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 455390 457893 3172 + . alignment_id 0 ; Query GL50803_88369-t26_1-p1 ; Align 455390 1 603 ; Align 455993 203 273 ; Align 456267 294 228 ; Align 456496 370 336 ; Align 456832 484 126 ; Align 456958 528 135 ; Align 457093 577 801 utg308_pilon exonerate:protein2genome:local gene 451621 451908 210 - . gene_id 0 ; sequence GL50803_88373-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 451621 451908 . - . utg308_pilon exonerate:protein2genome:local exon 451621 451908 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 451621 451908 210 - . alignment_id 0 ; Query GL50803_88373-t26_1-p1 ; Align 451909 1 288 utg349_pilon exonerate:protein2genome:local gene 1581300 1582727 2273 - . gene_id 0 ; sequence GL50803_8842-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1581300 1582727 . - . utg349_pilon exonerate:protein2genome:local exon 1581300 1582727 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1581300 1582727 2273 - . alignment_id 0 ; Query GL50803_8842-t26_1-p1 ; Align 1582728 1 1428 utg349_pilon exonerate:protein2genome:local gene 1580985 1581212 376 + . gene_id 0 ; sequence GL50803_8843-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1580985 1581212 . + . utg349_pilon exonerate:protein2genome:local exon 1580985 1581212 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1580985 1581212 376 + . alignment_id 0 ; Query GL50803_8843-t26_1-p1 ; Align 1580985 1 228 utg18_pilon exonerate:protein2genome:local gene 410126 410431 255 - . gene_id 0 ; sequence GL50803_88436-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 410126 410431 . - . utg18_pilon exonerate:protein2genome:local exon 410126 410431 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 410126 410431 255 - . alignment_id 0 ; Query GL50803_88436-t26_1-p1 ; Align 410432 4 306 utg18_pilon exonerate:protein2genome:local gene 409472 412294 3817 + . gene_id 0 ; sequence GL50803_88438-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 409472 412294 . + . utg18_pilon exonerate:protein2genome:local exon 409472 412294 . + . insertions 6 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 409472 412294 3817 + . alignment_id 0 ; Query GL50803_88438-t26_1-p1 ; Align 409472 1 2541 ; Align 412019 848 39 ; Align 412058 862 237 utg349_pilon exonerate:protein2genome:local gene 1580985 1581095 153 - . gene_id 0 ; sequence GL50803_8844-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1580985 1581095 . - . utg349_pilon exonerate:protein2genome:local exon 1580985 1581095 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1580985 1581095 153 - . alignment_id 0 ; Query GL50803_8844-t26_1-p1 ; Align 1581096 1 111 utg47_pilon exonerate:protein2genome:local gene 1728863 1729096 343 - . gene_id 0 ; sequence GL50803_88462-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1728863 1729096 . - . utg47_pilon exonerate:protein2genome:local exon 1728863 1729096 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1728863 1729096 343 - . alignment_id 0 ; Query GL50803_88462-t26_1-p1 ; Align 1729097 3 234 utg349_pilon exonerate:protein2genome:local gene 1575262 1576725 1548 + . gene_id 0 ; sequence GL50803_8847-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1575262 1576725 . + . utg349_pilon exonerate:protein2genome:local exon 1575262 1576725 . + . insertions 9 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 1575262 1576725 1548 + . alignment_id 0 ; Query GL50803_8847-t26_1-p1 ; Align 1575262 1 117 ; Align 1575388 40 144 ; Align 1575532 89 732 ; Align 1576264 335 237 ; Align 1576501 417 225 utg349_pilon exonerate:protein2genome:local gene 1574426 1575097 867 - . gene_id 0 ; sequence GL50803_8848-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1574426 1575097 . - . utg349_pilon exonerate:protein2genome:local exon 1574426 1575097 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 1574426 1575097 867 - . alignment_id 0 ; Query GL50803_8848-t26_1-p1 ; Align 1575098 1 594 ; Align 1574504 202 78 utg349_pilon exonerate:protein2genome:local gene 1569878 1572127 3008 + . gene_id 0 ; sequence GL50803_8850-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1569878 1572127 . + . utg349_pilon exonerate:protein2genome:local exon 1569878 1572127 . + . insertions 9 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 1569878 1572127 3008 + . alignment_id 0 ; Query GL50803_8850-t26_1-p1 ; Align 1569878 3 699 ; Align 1570577 238 72 ; Align 1570655 262 39 ; Align 1570697 275 1431 utg47_pilon exonerate:protein2genome:local gene 2133234 2135147 2665 - . gene_id 0 ; sequence GL50803_8854-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2133234 2135147 . - . utg47_pilon exonerate:protein2genome:local exon 2133234 2135147 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2133234 2135147 2665 - . alignment_id 0 ; Query GL50803_8854-t26_1-p1 ; Align 2135148 1 1914 utg47_pilon exonerate:protein2genome:local gene 2135186 2137978 4016 - . gene_id 0 ; sequence GL50803_8855-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2135186 2137978 . - . utg47_pilon exonerate:protein2genome:local exon 2135186 2137978 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 2135186 2137978 4016 - . alignment_id 0 ; Query GL50803_8855-t26_1-p1 ; Align 2137979 1 2397 ; Align 2135582 801 396 utg99_pilon exonerate:protein2genome:local gene 529409 530389 1514 + . gene_id 0 ; sequence GL50803_88556-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 529409 530389 . + . utg99_pilon exonerate:protein2genome:local exon 529409 530389 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 529409 530389 1514 + . alignment_id 0 ; Query GL50803_88556-t26_1-p1 ; Align 529409 1 981 utg47_pilon exonerate:protein2genome:local gene 2138065 2139030 1307 + . gene_id 0 ; sequence GL50803_8856-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2138065 2139030 . + . utg47_pilon exonerate:protein2genome:local exon 2138065 2139030 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2138065 2139030 1307 + . alignment_id 0 ; Query GL50803_8856-t26_1-p1 ; Align 2138065 1 966 utg47_pilon exonerate:protein2genome:local gene 2141782 2142636 1062 - . gene_id 0 ; sequence GL50803_8858-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2141782 2142636 . - . utg47_pilon exonerate:protein2genome:local exon 2141782 2142636 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2141782 2142636 1062 - . alignment_id 0 ; Query GL50803_8858-t26_1-p1 ; Align 2142637 1 855 utg99_pilon exonerate:protein2genome:local gene 166035 167069 1560 + . gene_id 0 ; sequence GL50803_88581-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 166035 167069 . + . utg99_pilon exonerate:protein2genome:local exon 166035 167069 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 166035 167069 1560 + . alignment_id 0 ; Query GL50803_88581-t26_1-p1 ; Align 166035 1 1035 utg731_pilon exonerate:protein2genome:local gene 568840 1114700 929 - . gene_id 0 ; sequence GL50803_8860-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1114224 1114700 . - . utg731_pilon exonerate:protein2genome:local exon 1114224 1114700 . - . insertions 3 ; deletions 1 utg731_pilon exonerate:protein2genome:local splice5 1114222 1114223 . - . intron_id 1 ; splice_site "GG" utg731_pilon exonerate:protein2genome:local intron 1099836 1114223 . - . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1099836 1099837 . - . intron_id 0 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1099259 1099835 . - . utg731_pilon exonerate:protein2genome:local exon 1099259 1099835 . - . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1099257 1099258 . - . intron_id 2 ; splice_site "CT" utg731_pilon exonerate:protein2genome:local intron 1098113 1099258 . - . intron_id 2 utg731_pilon exonerate:protein2genome:local splice3 1098113 1098114 . - . intron_id 1 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1098047 1098112 . - . utg731_pilon exonerate:protein2genome:local exon 1098047 1098112 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1098045 1098046 . - . intron_id 3 ; splice_site "GT" utg731_pilon exonerate:protein2genome:local intron 1088649 1098046 . - . intron_id 3 utg731_pilon exonerate:protein2genome:local splice3 1088649 1088650 . - . intron_id 2 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 1088538 1088648 . - . utg731_pilon exonerate:protein2genome:local exon 1088538 1088648 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 1088536 1088537 . - . intron_id 4 ; splice_site "CT" utg731_pilon exonerate:protein2genome:local intron 994435 1088537 . - . intron_id 4 utg731_pilon exonerate:protein2genome:local splice3 994435 994436 . - . intron_id 3 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 994274 994434 . - . utg731_pilon exonerate:protein2genome:local exon 994274 994434 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 994272 994273 . - . intron_id 5 ; splice_site "TT" utg731_pilon exonerate:protein2genome:local intron 899817 994273 . - . intron_id 5 utg731_pilon exonerate:protein2genome:local splice3 899817 899818 . - . intron_id 4 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 899568 899816 . - . utg731_pilon exonerate:protein2genome:local exon 899568 899816 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 899566 899567 . - . intron_id 6 ; splice_site "GG" utg731_pilon exonerate:protein2genome:local intron 898851 899567 . - . intron_id 6 utg731_pilon exonerate:protein2genome:local splice3 898851 898852 . - . intron_id 5 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 898743 898850 . - . utg731_pilon exonerate:protein2genome:local exon 898743 898850 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 898741 898742 . - . intron_id 7 ; splice_site "AT" utg731_pilon exonerate:protein2genome:local intron 712579 898742 . - . intron_id 7 utg731_pilon exonerate:protein2genome:local splice3 712579 712580 . - . intron_id 6 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 712491 712578 . - . utg731_pilon exonerate:protein2genome:local exon 712491 712578 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local splice5 712489 712490 . - . intron_id 8 ; splice_site "TC" utg731_pilon exonerate:protein2genome:local intron 569310 712490 . - . intron_id 8 utg731_pilon exonerate:protein2genome:local splice3 569310 569311 . - . intron_id 7 ; splice_site "AG" utg731_pilon exonerate:protein2genome:local cds 568840 569309 . - . utg731_pilon exonerate:protein2genome:local exon 568840 569309 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 568840 1114700 929 - . alignment_id 0 ; Query GL50803_8860-t26_1-p1 ; Align 1114701 27 363 ; Align 1114335 148 81 ; Align 1114254 176 30 ; Align 1099836 186 243 ; Align 1099587 267 327 ; Align 1098111 377 63 ; Align 1088647 399 108 ; Align 994433 436 159 ; Align 899817 489 249 ; Align 898851 572 108 ; Align 712579 608 87 ; Align 569308 638 468 utg47_pilon exonerate:protein2genome:local gene 2145308 2146936 1499 + . gene_id 0 ; sequence GL50803_8862-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2145308 2146936 . + . utg47_pilon exonerate:protein2genome:local exon 2145308 2146936 . + . insertions 6 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 2145308 2146936 1499 + . alignment_id 0 ; Query GL50803_8862-t26_1-p1 ; Align 2145308 1 834 ; Align 2146142 280 327 ; Align 2146475 389 162 ; Align 2146637 444 300 utg47_pilon exonerate:protein2genome:local gene 2147992 2149203 1960 + . gene_id 0 ; sequence GL50803_8865-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2147992 2149203 . + . utg47_pilon exonerate:protein2genome:local exon 2147992 2149203 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2147992 2149203 1960 + . alignment_id 0 ; Query GL50803_8865-t26_1-p1 ; Align 2147992 1 1212 utg47_pilon exonerate:protein2genome:local gene 456099 456282 112 - . gene_id 0 ; sequence GL50803_88730-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 456099 456282 . - . utg47_pilon exonerate:protein2genome:local exon 456099 456282 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 456099 456282 112 - . alignment_id 0 ; Query GL50803_88730-t26_1-p1 ; Align 456283 4 93 ; Align 456189 36 90 utg47_pilon exonerate:protein2genome:local gene 451399 453357 2661 + . gene_id 0 ; sequence GL50803_88735-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 451399 453357 . + . utg47_pilon exonerate:protein2genome:local exon 451399 453357 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 451399 453357 2661 + . alignment_id 0 ; Query GL50803_88735-t26_1-p1 ; Align 451399 2 1959 utg11_pilon exonerate:protein2genome:local gene 465144 465275 203 + . gene_id 0 ; sequence GL50803_8874-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 465144 465275 . + . utg11_pilon exonerate:protein2genome:local exon 465144 465275 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 465144 465275 203 + . alignment_id 0 ; Query GL50803_8874-t26_1-p1 ; Align 465144 1 132 utg47_pilon exonerate:protein2genome:local gene 445894 446280 659 - . gene_id 0 ; sequence GL50803_88750-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 445894 446280 . - . utg47_pilon exonerate:protein2genome:local exon 445894 446280 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 445894 446280 659 - . alignment_id 0 ; Query GL50803_88750-t26_1-p1 ; Align 446281 44 387 utg47_pilon exonerate:protein2genome:local gene 389215 389601 659 - . gene_id 0 ; sequence GL50803_88750-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 389215 389601 . - . utg47_pilon exonerate:protein2genome:local exon 389215 389601 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 389215 389601 659 - . alignment_id 0 ; Query GL50803_88750-t26_1-p1 ; Align 389602 44 387 utg47_pilon exonerate:protein2genome:local gene 1975646 1977637 3364 - . gene_id 0 ; sequence GL50803_88765-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1975646 1977637 . - . utg47_pilon exonerate:protein2genome:local exon 1975646 1977637 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1975646 1977637 3364 - . alignment_id 0 ; Query GL50803_88765-t26_1-p1 ; Align 1977638 1 1992 utg11_pilon exonerate:protein2genome:local gene 460808 462620 2625 - . gene_id 0 ; sequence GL50803_8880-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 460808 462620 . - . utg11_pilon exonerate:protein2genome:local exon 460808 462620 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local similarity 460808 462620 2625 - . alignment_id 0 ; Query GL50803_8880-t26_1-p1 ; Align 462621 4 30 ; Align 462590 14 1782 utg64_pilon exonerate:protein2genome:local gene 368580 368909 338 + . gene_id 0 ; sequence GL50803_88809-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 368580 368909 . + . utg64_pilon exonerate:protein2genome:local exon 368580 368909 . + . insertions 9 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 368580 368909 338 + . alignment_id 0 ; Query GL50803_88809-t26_1-p1 ; Align 368580 1 144 ; Align 368733 49 177 utg64_pilon exonerate:protein2genome:local gene 357344 357673 338 - . gene_id 0 ; sequence GL50803_88809-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 357344 357673 . - . utg64_pilon exonerate:protein2genome:local exon 357344 357673 . - . insertions 9 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 357344 357673 338 - . alignment_id 0 ; Query GL50803_88809-t26_1-p1 ; Align 357674 1 144 ; Align 357521 49 177 utg308_pilon exonerate:protein2genome:local gene 825595 825924 338 + . gene_id 0 ; sequence GL50803_88809-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 825595 825924 . + . utg308_pilon exonerate:protein2genome:local exon 825595 825924 . + . insertions 9 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 825595 825924 338 + . alignment_id 0 ; Query GL50803_88809-t26_1-p1 ; Align 825595 1 144 ; Align 825748 49 177 utg731_pilon exonerate:protein2genome:local gene 68444 68773 338 + . gene_id 0 ; sequence GL50803_88809-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 68444 68773 . + . utg731_pilon exonerate:protein2genome:local exon 68444 68773 . + . insertions 9 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 68444 68773 338 + . alignment_id 0 ; Query GL50803_88809-t26_1-p1 ; Align 68444 1 144 ; Align 68597 49 177 utg64_pilon exonerate:protein2genome:local gene 159384 160356 388 + . gene_id 0 ; sequence GL50803_88814-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 159384 159537 . + . utg64_pilon exonerate:protein2genome:local exon 159384 159537 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 159538 159539 . + . intron_id 1 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 159538 159982 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 159981 159982 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 159983 160356 . + . utg64_pilon exonerate:protein2genome:local exon 159983 160356 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 159384 160356 388 + . alignment_id 0 ; Query GL50803_88814-t26_1-p1 ; Align 159384 1 153 ; Align 159985 53 177 ; Align 160165 112 192 utg11_pilon exonerate:protein2genome:local gene 459238 459375 174 + . gene_id 0 ; sequence GL50803_8882-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 459238 459375 . + . utg11_pilon exonerate:protein2genome:local exon 459238 459375 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 459238 459375 174 + . alignment_id 0 ; Query GL50803_8882-t26_1-p1 ; Align 459238 2 138 utg11_pilon exonerate:protein2genome:local gene 458898 460313 2094 - . gene_id 0 ; sequence GL50803_8883-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 459602 460313 . - . utg11_pilon exonerate:protein2genome:local exon 459602 460313 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 459600 459601 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 459566 459601 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 459566 459567 . - . intron_id 0 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local cds 458898 459565 . - . utg11_pilon exonerate:protein2genome:local exon 458898 459565 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 458898 460313 2094 - . alignment_id 0 ; Query GL50803_8883-t26_1-p1 ; Align 460314 1 711 ; Align 459564 239 666 utg11_pilon exonerate:protein2genome:local gene 450166 452040 2806 + . gene_id 0 ; sequence GL50803_8886-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 450166 452040 . + . utg11_pilon exonerate:protein2genome:local exon 450166 452040 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 450166 452040 2806 + . alignment_id 0 ; Query GL50803_8886-t26_1-p1 ; Align 450166 1 1875 utg212_pilon exonerate:protein2genome:local gene 374014 375172 1326 + . gene_id 0 ; sequence GL50803_88888-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 374014 375172 . + . utg212_pilon exonerate:protein2genome:local exon 374014 375172 . + . insertions 3 ; deletions 7 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 374014 375172 1326 + . alignment_id 0 ; Query GL50803_88888-t26_1-p1 ; Align 374014 1 282 ; Align 374296 99 135 ; Align 374431 146 93 ; Align 374527 177 234 ; Align 374762 256 411 utg11_pilon exonerate:protein2genome:local gene 445531 624682 1262 - . gene_id 0 ; sequence GL50803_8890-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 624627 624682 . - . utg11_pilon exonerate:protein2genome:local exon 624627 624682 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 624625 624626 . - . intron_id 1 ; splice_site "CT" utg11_pilon exonerate:protein2genome:local intron 446714 624626 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 446714 446715 . - . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 445531 446713 . - . utg11_pilon exonerate:protein2genome:local exon 445531 446713 . - . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 445531 624682 1262 - . alignment_id 0 ; Query GL50803_8890-t26_1-p1 ; Align 624683 115 54 ; Align 446713 134 189 ; Align 446524 198 39 ; Align 446485 212 270 ; Align 446215 303 684 utg212_pilon exonerate:protein2genome:local gene 388141 388495 408 - . gene_id 0 ; sequence GL50803_88901-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 388141 388495 . - . utg212_pilon exonerate:protein2genome:local exon 388141 388495 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 388141 388495 408 - . alignment_id 0 ; Query GL50803_88901-t26_1-p1 ; Align 388496 3 87 ; Align 388408 32 267 utg11_pilon exonerate:protein2genome:local gene 443998 445401 2091 - . gene_id 0 ; sequence GL50803_8892-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 443998 445401 . - . utg11_pilon exonerate:protein2genome:local exon 443998 445401 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 443998 445401 2091 - . alignment_id 0 ; Query GL50803_8892-t26_1-p1 ; Align 445402 1 1404 utg212_pilon exonerate:protein2genome:local gene 433842 434334 755 + . gene_id 0 ; sequence GL50803_88922-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 433842 434334 . + . utg212_pilon exonerate:protein2genome:local exon 433842 434334 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 433842 434334 755 + . alignment_id 0 ; Query GL50803_88922-t26_1-p1 ; Align 433842 1 348 ; Align 434191 117 144 utg212_pilon exonerate:protein2genome:local gene 304035 305042 876 + . gene_id 0 ; sequence GL50803_88945-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 304035 305042 . + . utg212_pilon exonerate:protein2genome:local exon 304035 305042 . + . insertions 3 ; deletions 1 utg212_pilon exonerate:protein2genome:local similarity 304035 305042 876 + . alignment_id 0 ; Query GL50803_88945-t26_1-p1 ; Align 304035 17 408 ; Align 304446 153 150 ; Align 304596 204 447 utg212_pilon exonerate:protein2genome:local gene 313441 313914 475 - . gene_id 0 ; sequence GL50803_88956-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 313441 313914 . - . utg212_pilon exonerate:protein2genome:local exon 313441 313914 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 313441 313914 475 - . alignment_id 0 ; Query GL50803_88956-t26_1-p1 ; Align 313915 1 474 utg47_pilon exonerate:protein2genome:local gene 2104374 2105369 1453 + . gene_id 0 ; sequence GL50803_8896-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2104374 2105369 . + . utg47_pilon exonerate:protein2genome:local exon 2104374 2105369 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2104374 2105369 1453 + . alignment_id 0 ; Query GL50803_8896-t26_1-p1 ; Align 2104374 1 996 utg212_pilon exonerate:protein2genome:local gene 314782 315384 680 - . gene_id 0 ; sequence GL50803_88960-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 314782 315384 . - . utg212_pilon exonerate:protein2genome:local exon 314782 315384 . - . insertions 0 ; deletions 9 utg212_pilon exonerate:protein2genome:local similarity 314782 315384 680 - . alignment_id 0 ; Query GL50803_88960-t26_1-p1 ; Align 315385 65 105 ; Align 315280 103 192 ; Align 315088 169 201 ; Align 314887 240 105 utg212_pilon exonerate:protein2genome:local gene 351008 351244 249 - . gene_id 0 ; sequence GL50803_89001-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 351008 351244 . - . utg212_pilon exonerate:protein2genome:local exon 351008 351244 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 351008 351244 249 - . alignment_id 0 ; Query GL50803_89001-t26_1-p1 ; Align 351245 3 237 utg47_pilon exonerate:protein2genome:local gene 2118158 2118919 1203 + . gene_id 0 ; sequence GL50803_8903-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2118158 2118919 . + . utg47_pilon exonerate:protein2genome:local exon 2118158 2118919 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2118158 2118919 1203 + . alignment_id 0 ; Query GL50803_8903-t26_1-p1 ; Align 2118158 1 762 utg349_pilon exonerate:protein2genome:local gene 483094 489267 9080 + . gene_id 0 ; sequence GL50803_89050-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 483094 489267 . + . utg349_pilon exonerate:protein2genome:local exon 483094 489267 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 483094 489267 9080 + . alignment_id 0 ; Query GL50803_89050-t26_1-p1 ; Align 483094 1 1683 ; Align 484780 562 4488 utg47_pilon exonerate:protein2genome:local gene 2129018 2129875 1264 - . gene_id 0 ; sequence GL50803_8909-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2129018 2129875 . - . utg47_pilon exonerate:protein2genome:local exon 2129018 2129875 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2129018 2129875 1264 - . alignment_id 0 ; Query GL50803_8909-t26_1-p1 ; Align 2129876 1 858 utg308_pilon exonerate:protein2genome:local gene 805053 805436 309 - . gene_id 0 ; sequence GL50803_89099-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 805053 805436 . - . utg308_pilon exonerate:protein2genome:local exon 805053 805436 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 805053 805436 309 - . alignment_id 0 ; Query GL50803_89099-t26_1-p1 ; Align 805437 4 51 ; Align 805383 21 330 utg99_pilon exonerate:protein2genome:local gene 362791 363033 329 - . gene_id 0 ; sequence GL50803_89109-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 362791 363033 . - . utg99_pilon exonerate:protein2genome:local exon 362791 363033 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 362791 363033 329 - . alignment_id 0 ; Query GL50803_89109-t26_1-p1 ; Align 363034 1 243 utg99_pilon exonerate:protein2genome:local gene 361571 363760 3309 + . gene_id 0 ; sequence GL50803_89112-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 361571 363760 . + . utg99_pilon exonerate:protein2genome:local exon 361571 363760 . + . insertions 3 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 361571 363760 3309 + . alignment_id 0 ; Query GL50803_89112-t26_1-p1 ; Align 361571 1 690 ; Align 362261 232 30 ; Align 362294 242 1467 utg99_pilon exonerate:protein2genome:local gene 353085 360179 7694 - . gene_id 0 ; sequence GL50803_89117-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 353501 360179 . - . utg99_pilon exonerate:protein2genome:local exon 353501 360179 . - . insertions 18 ; deletions 8 utg99_pilon exonerate:protein2genome:local splice5 353499 353500 . - . intron_id 1 ; splice_site "AT" utg99_pilon exonerate:protein2genome:local intron 353465 353500 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 353465 353466 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 353085 353464 . - . utg99_pilon exonerate:protein2genome:local exon 353085 353464 . - . insertions 0 ; deletions 3 utg99_pilon exonerate:protein2genome:local similarity 353085 360179 7694 - . alignment_id 0 ; Query GL50803_89117-t26_1-p1 ; Align 360180 1 1425 ; Align 358755 477 87 ; Align 358668 509 522 ; Align 358146 684 99 ; Align 358047 718 1404 ; Align 356634 1186 1281 ; Align 355347 1613 1062 ; Align 354285 1968 81 ; Align 354201 1995 603 ; Align 353598 2197 96 ; Align 353463 2230 75 ; Align 353388 2258 303 utg47_pilon exonerate:protein2genome:local gene 1602112 1602762 1014 - . gene_id 0 ; sequence GL50803_8913-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1602112 1602762 . - . utg47_pilon exonerate:protein2genome:local exon 1602112 1602762 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1602112 1602762 1014 - . alignment_id 0 ; Query GL50803_8913-t26_1-p1 ; Align 1602763 1 651 utg47_pilon exonerate:protein2genome:local gene 1602895 1604682 2504 + . gene_id 0 ; sequence GL50803_8914-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1602895 1604682 . + . utg47_pilon exonerate:protein2genome:local exon 1602895 1604682 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1602895 1604682 2504 + . alignment_id 0 ; Query GL50803_8914-t26_1-p1 ; Align 1602895 1 1788 utg47_pilon exonerate:protein2genome:local gene 1605649 1607468 2263 - . gene_id 0 ; sequence GL50803_8916-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1605649 1607468 . - . utg47_pilon exonerate:protein2genome:local exon 1605649 1607468 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1605649 1607468 2263 - . alignment_id 0 ; Query GL50803_8916-t26_1-p1 ; Align 1607469 1 150 ; Align 1607317 52 1668 utg47_pilon exonerate:protein2genome:local gene 1607591 1608892 2197 + . gene_id 0 ; sequence GL50803_8917-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1607591 1608892 . + . utg47_pilon exonerate:protein2genome:local exon 1607591 1608892 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1607591 1608892 2197 + . alignment_id 0 ; Query GL50803_8917-t26_1-p1 ; Align 1607591 1 1302 utg47_pilon exonerate:protein2genome:local gene 1612196 1612924 1129 - . gene_id 0 ; sequence GL50803_8920-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1612196 1612924 . - . utg47_pilon exonerate:protein2genome:local exon 1612196 1612924 . - . insertions 3 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1612196 1612924 1129 - . alignment_id 0 ; Query GL50803_8920-t26_1-p1 ; Align 1612925 1 597 ; Align 1612328 202 66 ; Align 1612259 224 63 utg47_pilon exonerate:protein2genome:local gene 1612937 1615000 2873 - . gene_id 0 ; sequence GL50803_8921-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1612937 1615000 . - . utg47_pilon exonerate:protein2genome:local exon 1612937 1615000 . - . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 1612937 1615000 2873 - . alignment_id 0 ; Query GL50803_8921-t26_1-p1 ; Align 1615001 1 255 ; Align 1614746 90 1809 utg47_pilon exonerate:protein2genome:local gene 1615035 1616096 1326 - . gene_id 0 ; sequence GL50803_8922-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1615035 1616096 . - . utg47_pilon exonerate:protein2genome:local exon 1615035 1616096 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1615035 1616096 1326 - . alignment_id 0 ; Query GL50803_8922-t26_1-p1 ; Align 1616097 1 1062 utg349_pilon exonerate:protein2genome:local gene 432154 433845 2246 + . gene_id 0 ; sequence GL50803_8928-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 432154 433845 . + . utg349_pilon exonerate:protein2genome:local exon 432154 433845 . + . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 432154 433845 2246 + . alignment_id 0 ; Query GL50803_8928-t26_1-p1 ; Align 432154 1 834 ; Align 432988 282 858 utg64_pilon exonerate:protein2genome:local gene 578902 580116 1560 - . gene_id 0 ; sequence GL50803_89285-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 578902 580116 . - . utg64_pilon exonerate:protein2genome:local exon 578902 580116 . - . insertions 0 ; deletions 3 utg64_pilon exonerate:protein2genome:local similarity 578902 580116 1560 - . alignment_id 0 ; Query GL50803_89285-t26_1-p1 ; Align 580117 6 954 ; Align 579163 327 261 utg349_pilon exonerate:protein2genome:local gene 433835 434794 1267 - . gene_id 0 ; sequence GL50803_8929-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 433835 434794 . - . utg349_pilon exonerate:protein2genome:local exon 433835 434794 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 433835 434794 1267 - . alignment_id 0 ; Query GL50803_8929-t26_1-p1 ; Align 434795 1 960 utg308_pilon exonerate:protein2genome:local gene 297674 297814 111 - . gene_id 0 ; sequence GL50803_893-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 297674 297814 . - . utg308_pilon exonerate:protein2genome:local exon 297674 297814 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 297674 297814 111 - . alignment_id 0 ; Query GL50803_893-t26_1-p1 ; Align 297815 12 141 utg11_pilon exonerate:protein2genome:local gene 437375 1159319 1225 - . gene_id 0 ; sequence GL50803_89315-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 1159013 1159319 . - . utg11_pilon exonerate:protein2genome:local exon 1159013 1159319 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1159011 1159012 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 1063359 1159012 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1063359 1063360 . - . intron_id 0 ; splice_site "TT" utg11_pilon exonerate:protein2genome:local cds 1063321 1063358 . - . utg11_pilon exonerate:protein2genome:local exon 1063321 1063358 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 1063319 1063320 . - . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 939861 1063320 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 939861 939862 . - . intron_id 1 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 939620 939860 . - . utg11_pilon exonerate:protein2genome:local exon 939620 939860 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local splice5 939618 939619 . - . intron_id 3 ; splice_site "GG" utg11_pilon exonerate:protein2genome:local intron 834163 939619 . - . intron_id 3 utg11_pilon exonerate:protein2genome:local splice3 834163 834164 . - . intron_id 2 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 834125 834162 . - . utg11_pilon exonerate:protein2genome:local exon 834125 834162 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 834123 834124 . - . intron_id 4 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 645975 834124 . - . intron_id 4 utg11_pilon exonerate:protein2genome:local splice3 645975 645976 . - . intron_id 3 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 645685 645974 . - . utg11_pilon exonerate:protein2genome:local exon 645685 645974 . - . insertions 3 ; deletions 1 utg11_pilon exonerate:protein2genome:local splice5 645683 645684 . - . intron_id 5 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 545183 645684 . - . intron_id 5 utg11_pilon exonerate:protein2genome:local splice3 545183 545184 . - . intron_id 4 ; splice_site "AA" utg11_pilon exonerate:protein2genome:local cds 544962 545182 . - . utg11_pilon exonerate:protein2genome:local exon 544962 545182 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local splice5 544960 544961 . - . intron_id 6 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 437494 544961 . - . intron_id 6 utg11_pilon exonerate:protein2genome:local splice3 437494 437495 . - . intron_id 5 ; splice_site "TA" utg11_pilon exonerate:protein2genome:local cds 437375 437493 . - . utg11_pilon exonerate:protein2genome:local exon 437375 437493 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 437375 1159319 1225 - . alignment_id 0 ; Query GL50803_89315-t26_1-p1 ; Align 1159320 22 306 ; Align 1063357 125 36 ; Align 939861 137 102 ; Align 939759 173 138 ; Align 834161 220 36 ; Align 645975 232 231 ; Align 645744 310 39 ; Align 645702 323 15 ; Align 545182 329 33 ; Align 545149 342 186 ; Align 437492 405 117 utg47_pilon exonerate:protein2genome:local gene 1899739 1900005 133 + . gene_id 0 ; sequence GL50803_89333-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1899739 1900005 . + . utg47_pilon exonerate:protein2genome:local exon 1899739 1900005 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1899739 1900005 133 + . alignment_id 0 ; Query GL50803_89333-t26_1-p1 ; Align 1899739 8 267 utg47_pilon exonerate:protein2genome:local gene 1882153 1888383 9903 - . gene_id 0 ; sequence GL50803_89347-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1882153 1888383 . - . utg47_pilon exonerate:protein2genome:local exon 1882153 1888383 . - . insertions 9 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 1882153 1888383 9903 - . alignment_id 0 ; Query GL50803_89347-t26_1-p1 ; Align 1888384 1 1941 ; Align 1886443 649 2118 ; Align 1884316 1355 1560 ; Align 1882756 1876 603 utg349_pilon exonerate:protein2genome:local gene 444225 444557 538 + . gene_id 0 ; sequence GL50803_8937-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 444225 444557 . + . utg349_pilon exonerate:protein2genome:local exon 444225 444557 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 444225 444557 538 + . alignment_id 0 ; Query GL50803_8937-t26_1-p1 ; Align 444225 1 333 utg349_pilon exonerate:protein2genome:local gene 450191 450967 1176 - . gene_id 0 ; sequence GL50803_8942-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 450191 450967 . - . utg349_pilon exonerate:protein2genome:local exon 450191 450967 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 450191 450967 1176 - . alignment_id 0 ; Query GL50803_8942-t26_1-p1 ; Align 450968 1 777 utg349_pilon exonerate:protein2genome:local gene 454514 455089 924 + . gene_id 0 ; sequence GL50803_8944-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 454514 455089 . + . utg349_pilon exonerate:protein2genome:local exon 454514 455089 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 454514 455089 924 + . alignment_id 0 ; Query GL50803_8944-t26_1-p1 ; Align 454514 1 576 utg349_pilon exonerate:protein2genome:local gene 1260859 1261465 621 - . gene_id 0 ; sequence GL50803_89440-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1260859 1261465 . - . utg349_pilon exonerate:protein2genome:local exon 1260859 1261465 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 1260859 1261465 621 - . alignment_id 0 ; Query GL50803_89440-t26_1-p1 ; Align 1261466 1 537 ; Align 1260928 180 69 utg349_pilon exonerate:protein2genome:local gene 455088 455624 706 - . gene_id 0 ; sequence GL50803_8946-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 455088 455624 . - . utg349_pilon exonerate:protein2genome:local exon 455088 455624 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 455088 455624 706 - . alignment_id 0 ; Query GL50803_8946-t26_1-p1 ; Align 455625 1 537 utg47_pilon exonerate:protein2genome:local gene 1484138 1484351 271 - . gene_id 0 ; sequence GL50803_89475-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1484138 1484351 . - . utg47_pilon exonerate:protein2genome:local exon 1484138 1484351 . - . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1484138 1484351 271 - . alignment_id 0 ; Query GL50803_89475-t26_1-p1 ; Align 1484352 1 36 ; Align 1484315 14 177 utg349_pilon exonerate:protein2genome:local gene 457398 460568 3857 - . gene_id 0 ; sequence GL50803_8949-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 457398 460568 . - . utg349_pilon exonerate:protein2genome:local exon 457398 460568 . - . insertions 6 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 457398 460568 3857 - . alignment_id 0 ; Query GL50803_8949-t26_1-p1 ; Align 460569 268 360 ; Align 460206 388 15 ; Align 460188 393 138 ; Align 460050 440 78 ; Align 459972 467 99 ; Align 459873 503 2475 utg47_pilon exonerate:protein2genome:local gene 1465300 1465506 184 - . gene_id 0 ; sequence GL50803_89496-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1465300 1465506 . - . utg47_pilon exonerate:protein2genome:local exon 1465300 1465506 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1465300 1465506 184 - . alignment_id 0 ; Query GL50803_89496-t26_1-p1 ; Align 1465507 1 207 utg349_pilon exonerate:protein2genome:local gene 1206855 1209587 3405 + . gene_id 0 ; sequence GL50803_89535-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1206855 1209587 . + . utg349_pilon exonerate:protein2genome:local exon 1206855 1209587 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1206855 1209587 3405 + . alignment_id 0 ; Query GL50803_89535-t26_1-p1 ; Align 1206855 1 819 ; Align 1207677 274 1911 utg349_pilon exonerate:protein2genome:local gene 1147950 1148231 199 + . gene_id 0 ; sequence GL50803_89549-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1147950 1148231 . + . utg349_pilon exonerate:protein2genome:local exon 1147950 1148231 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1147950 1148231 199 + . alignment_id 0 ; Query GL50803_89549-t26_1-p1 ; Align 1147950 1 282 utg47_pilon exonerate:protein2genome:local gene 2073598 2075751 2623 + . gene_id 0 ; sequence GL50803_8955-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2073598 2075751 . + . utg47_pilon exonerate:protein2genome:local exon 2073598 2075751 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2073598 2075751 2623 + . alignment_id 0 ; Query GL50803_8955-t26_1-p1 ; Align 2073598 1 2154 utg349_pilon exonerate:protein2genome:local gene 1144827 1150115 6890 - . gene_id 0 ; sequence GL50803_89552-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1144827 1150115 . - . utg349_pilon exonerate:protein2genome:local exon 1144827 1150115 . - . insertions 12 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1144827 1150115 6890 - . alignment_id 0 ; Query GL50803_89552-t26_1-p1 ; Align 1150116 1 2232 ; Align 1147881 745 705 ; Align 1147167 980 1188 ; Align 1145979 1377 1152 utg349_pilon exonerate:protein2genome:local gene 1143095 1143436 249 - . gene_id 0 ; sequence GL50803_89554-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1143095 1143436 . - . utg349_pilon exonerate:protein2genome:local exon 1143095 1143436 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1143095 1143436 249 - . alignment_id 0 ; Query GL50803_89554-t26_1-p1 ; Align 1143437 1 174 ; Align 1143263 60 168 utg47_pilon exonerate:protein2genome:local gene 2077022 2077519 346 + . gene_id 0 ; sequence GL50803_8958-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2077022 2077519 . + . utg47_pilon exonerate:protein2genome:local exon 2077022 2077519 . + . insertions 9 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2077022 2077519 346 + . alignment_id 0 ; Query GL50803_8958-t26_1-p1 ; Align 2077022 1 51 ; Align 2077082 18 438 utg47_pilon exonerate:protein2genome:local gene 2077901 2078830 1331 + . gene_id 0 ; sequence GL50803_8960-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2077901 2078830 . + . utg47_pilon exonerate:protein2genome:local exon 2077901 2078830 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2077901 2078830 1331 + . alignment_id 0 ; Query GL50803_8960-t26_1-p1 ; Align 2077901 1 321 ; Align 2078225 108 606 utg47_pilon exonerate:protein2genome:local gene 2078884 2081760 3473 - . gene_id 0 ; sequence GL50803_8961-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2078884 2081760 . - . utg47_pilon exonerate:protein2genome:local exon 2078884 2081760 . - . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 2078884 2081760 3473 - . alignment_id 0 ; Query GL50803_8961-t26_1-p1 ; Align 2081761 1 726 ; Align 2081035 245 675 ; Align 2080360 471 666 ; Align 2079694 695 810 utg349_pilon exonerate:protein2genome:local gene 1066646 1066879 125 - . gene_id 0 ; sequence GL50803_89616-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1066646 1066879 . - . utg349_pilon exonerate:protein2genome:local exon 1066646 1066879 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1066646 1066879 125 - . alignment_id 0 ; Query GL50803_89616-t26_1-p1 ; Align 1066880 30 234 utg349_pilon exonerate:protein2genome:local gene 1062375 1063718 1957 + . gene_id 0 ; sequence GL50803_89622-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1062375 1063718 . + . utg349_pilon exonerate:protein2genome:local exon 1062375 1063718 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1062375 1063718 1957 + . alignment_id 0 ; Query GL50803_89622-t26_1-p1 ; Align 1062375 1 1344 utg47_pilon exonerate:protein2genome:local gene 2081976 2083694 2430 + . gene_id 0 ; sequence GL50803_8963-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2081976 2083694 . + . utg47_pilon exonerate:protein2genome:local exon 2081976 2083694 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2081976 2083694 2430 + . alignment_id 0 ; Query GL50803_8963-t26_1-p1 ; Align 2081976 3 1719 utg47_pilon exonerate:protein2genome:local gene 2085368 2085604 317 - . gene_id 0 ; sequence GL50803_8967-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2085368 2085604 . - . utg47_pilon exonerate:protein2genome:local exon 2085368 2085604 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2085368 2085604 317 - . alignment_id 0 ; Query GL50803_8967-t26_1-p1 ; Align 2085605 1 237 utg47_pilon exonerate:protein2genome:local gene 2085369 2085620 408 + . gene_id 0 ; sequence GL50803_8968-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2085369 2085620 . + . utg47_pilon exonerate:protein2genome:local exon 2085369 2085620 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2085369 2085620 408 + . alignment_id 0 ; Query GL50803_8968-t26_1-p1 ; Align 2085369 1 252 utg47_pilon exonerate:protein2genome:local gene 2085868 2085990 121 + . gene_id 0 ; sequence GL50803_8970-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2085868 2085990 . + . utg47_pilon exonerate:protein2genome:local exon 2085868 2085990 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2085868 2085990 121 + . alignment_id 0 ; Query GL50803_8970-t26_1-p1 ; Align 2085868 7 123 utg11_pilon exonerate:protein2genome:local gene 1184177 1184410 331 + . gene_id 0 ; sequence GL50803_89722-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1184177 1184410 . + . utg11_pilon exonerate:protein2genome:local exon 1184177 1184410 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1184177 1184410 331 + . alignment_id 0 ; Query GL50803_89722-t26_1-p1 ; Align 1184177 1 234 utg11_pilon exonerate:protein2genome:local gene 1173680 1173916 303 - . gene_id 0 ; sequence GL50803_89728-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1173680 1173916 . - . utg11_pilon exonerate:protein2genome:local exon 1173680 1173916 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1173680 1173916 303 - . alignment_id 0 ; Query GL50803_89728-t26_1-p1 ; Align 1173917 2 237 utg47_pilon exonerate:protein2genome:local gene 913698 913934 303 - . gene_id 0 ; sequence GL50803_89728-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 913698 913934 . - . utg47_pilon exonerate:protein2genome:local exon 913698 913934 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 913698 913934 303 - . alignment_id 0 ; Query GL50803_89728-t26_1-p1 ; Align 913935 2 237 utg47_pilon exonerate:protein2genome:local gene 911239 914232 3693 + . gene_id 0 ; sequence GL50803_89730-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 911239 914232 . + . utg47_pilon exonerate:protein2genome:local exon 911239 914232 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 911239 914232 3693 + . alignment_id 0 ; Query GL50803_89730-t26_1-p1 ; Align 911239 1 2994 utg47_pilon exonerate:protein2genome:local gene 2089262 2089786 862 - . gene_id 0 ; sequence GL50803_8974-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2089262 2089786 . - . utg47_pilon exonerate:protein2genome:local exon 2089262 2089786 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2089262 2089786 862 - . alignment_id 0 ; Query GL50803_8974-t26_1-p1 ; Align 2089787 1 525 utg11_pilon exonerate:protein2genome:local gene 1046409 1047911 2156 + . gene_id 0 ; sequence GL50803_89746-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1046409 1047911 . + . utg11_pilon exonerate:protein2genome:local exon 1046409 1047911 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1046409 1047911 2156 + . alignment_id 0 ; Query GL50803_89746-t26_1-p1 ; Align 1046409 28 534 ; Align 1046943 208 969 utg731_pilon exonerate:protein2genome:local gene 1122440 1126042 5565 + . gene_id 0 ; sequence GL50803_8978-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1122440 1126042 . + . utg731_pilon exonerate:protein2genome:local exon 1122440 1126042 . + . insertions 15 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 1122440 1126042 5565 + . alignment_id 0 ; Query GL50803_8978-t26_1-p1 ; Align 1122440 15 1101 ; Align 1123541 387 891 ; Align 1124447 684 1596 utg11_pilon exonerate:protein2genome:local gene 1053897 1054166 142 - . gene_id 0 ; sequence GL50803_89784-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1053897 1054166 . - . utg11_pilon exonerate:protein2genome:local exon 1053897 1054166 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1053897 1054166 142 - . alignment_id 0 ; Query GL50803_89784-t26_1-p1 ; Align 1054167 1 270 utg731_pilon exonerate:protein2genome:local gene 1126063 1126404 514 - . gene_id 0 ; sequence GL50803_8979-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1126063 1126404 . - . utg731_pilon exonerate:protein2genome:local exon 1126063 1126404 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1126063 1126404 514 - . alignment_id 0 ; Query GL50803_8979-t26_1-p1 ; Align 1126405 1 342 utg349_pilon exonerate:protein2genome:local gene 516218 516469 339 + . gene_id 0 ; sequence GL50803_89798-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 516218 516469 . + . utg349_pilon exonerate:protein2genome:local exon 516218 516469 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 516218 516469 339 + . alignment_id 0 ; Query GL50803_89798-t26_1-p1 ; Align 516218 1 252 utg731_pilon exonerate:protein2genome:local gene 1126464 1126805 576 - . gene_id 0 ; sequence GL50803_8980-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1126464 1126805 . - . utg731_pilon exonerate:protein2genome:local exon 1126464 1126805 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1126464 1126805 576 - . alignment_id 0 ; Query GL50803_8980-t26_1-p1 ; Align 1126806 1 342 utg731_pilon exonerate:protein2genome:local gene 1129097 1134343 6342 - . gene_id 0 ; sequence GL50803_8982-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1129097 1134343 . - . utg731_pilon exonerate:protein2genome:local exon 1129097 1134343 . - . insertions 6 ; deletions 3 utg731_pilon exonerate:protein2genome:local similarity 1129097 1134343 6342 - . alignment_id 0 ; Query GL50803_8982-t26_1-p1 ; Align 1134344 3 1995 ; Align 1132346 668 384 ; Align 1131959 796 300 ; Align 1131659 897 504 ; Align 1131155 1067 2058 utg47_pilon exonerate:protein2genome:local gene 1336527 1338782 3509 + . gene_id 0 ; sequence GL50803_89828-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1336527 1338782 . + . utg47_pilon exonerate:protein2genome:local exon 1336527 1338782 . + . insertions 12 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1336527 1338782 3509 + . alignment_id 0 ; Query GL50803_89828-t26_1-p1 ; Align 1336527 1 1281 ; Align 1337811 428 60 ; Align 1337880 448 903 utg731_pilon exonerate:protein2genome:local gene 1134482 1137634 4000 + . gene_id 0 ; sequence GL50803_8983-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1134482 1137634 . + . utg731_pilon exonerate:protein2genome:local exon 1134482 1137634 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1134482 1137634 4000 + . alignment_id 0 ; Query GL50803_8983-t26_1-p1 ; Align 1134482 1 3153 utg47_pilon exonerate:protein2genome:local gene 884146 1332331 3047 + . gene_id 0 ; sequence GL50803_89845-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 884146 884223 . + . utg47_pilon exonerate:protein2genome:local exon 884146 884223 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 884224 884225 . + . intron_id 1 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 884224 988360 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 988359 988360 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 988361 988445 . + . utg47_pilon exonerate:protein2genome:local exon 988361 988445 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 988446 988447 . + . intron_id 2 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 988446 1084471 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 1084470 1084471 . + . intron_id 1 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1084472 1084501 . + . utg47_pilon exonerate:protein2genome:local exon 1084472 1084501 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1084502 1084503 . + . intron_id 3 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1084502 1200913 . + . intron_id 3 utg47_pilon exonerate:protein2genome:local splice3 1200912 1200913 . + . intron_id 2 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1200914 1201066 . + . utg47_pilon exonerate:protein2genome:local exon 1200914 1201066 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 1201067 1201068 . + . intron_id 4 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 1201067 1330040 . + . intron_id 4 utg47_pilon exonerate:protein2genome:local splice3 1330039 1330040 . + . intron_id 3 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 1330041 1332331 . + . utg47_pilon exonerate:protein2genome:local exon 1330041 1332331 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 884146 1332331 3047 + . alignment_id 0 ; Query GL50803_89845-t26_1-p1 ; Align 884146 28 78 ; Align 988361 54 84 ; Align 1084474 83 27 ; Align 1200916 93 150 ; Align 1330043 144 492 ; Align 1330535 309 1797 utg47_pilon exonerate:protein2genome:local gene 1280185 1280400 144 - . gene_id 0 ; sequence GL50803_89849-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1280185 1280400 . - . utg47_pilon exonerate:protein2genome:local exon 1280185 1280400 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1280185 1280400 144 - . alignment_id 0 ; Query GL50803_89849-t26_1-p1 ; Align 1280401 18 216 utg47_pilon exonerate:protein2genome:local gene 1278315 1278587 221 - . gene_id 0 ; sequence GL50803_89850-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1278315 1278587 . - . utg47_pilon exonerate:protein2genome:local exon 1278315 1278587 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1278315 1278587 221 - . alignment_id 0 ; Query GL50803_89850-t26_1-p1 ; Align 1278588 1 255 ; Align 1278330 86 15 utg349_pilon exonerate:protein2genome:local gene 68273 68803 906 - . gene_id 0 ; sequence GL50803_8987-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 68273 68803 . - . utg349_pilon exonerate:protein2genome:local exon 68273 68803 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 68273 68803 906 - . alignment_id 0 ; Query GL50803_8987-t26_1-p1 ; Align 68804 1 531 utg47_pilon exonerate:protein2genome:local gene 1234441 1236237 2963 - . gene_id 0 ; sequence GL50803_89887-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1234441 1236237 . - . utg47_pilon exonerate:protein2genome:local exon 1234441 1236237 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1234441 1236237 2963 - . alignment_id 0 ; Query GL50803_89887-t26_1-p1 ; Align 1236238 1 1797 utg731_pilon exonerate:protein2genome:local gene 1492500 1492721 283 + . gene_id 0 ; sequence GL50803_89995-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1492500 1492721 . + . utg731_pilon exonerate:protein2genome:local exon 1492500 1492721 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1492500 1492721 283 + . alignment_id 0 ; Query GL50803_89995-t26_1-p1 ; Align 1492500 1 222 utg731_pilon exonerate:protein2genome:local gene 1549722 1559087 11134 + . gene_id 0 ; sequence GL50803_90024-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 1549722 1558776 . + . utg731_pilon exonerate:protein2genome:local exon 1549722 1558776 . + . insertions 9 ; deletions 4 utg731_pilon exonerate:protein2genome:local splice5 1558777 1558778 . + . intron_id 1 ; splice_site "CT" utg731_pilon exonerate:protein2genome:local intron 1558777 1558842 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 1558841 1558842 . + . intron_id 0 ; splice_site "TG" utg731_pilon exonerate:protein2genome:local cds 1558843 1559087 . + . utg731_pilon exonerate:protein2genome:local exon 1558843 1559087 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1549722 1559087 11134 + . alignment_id 0 ; Query GL50803_90024-t26_1-p1 ; Align 1549722 1 1434 ; Align 1551156 480 594 ; Align 1551753 678 3138 ; Align 1554894 1724 1410 ; Align 1556304 2196 1896 ; Align 1558203 2828 501 ; Align 1558704 2996 72 ; Align 1558845 3021 243 utg731_pilon exonerate:protein2genome:local gene 1499348 1499980 873 + . gene_id 0 ; sequence GL50803_9003-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1499348 1499980 . + . utg731_pilon exonerate:protein2genome:local exon 1499348 1499980 . + . insertions 0 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 1499348 1499980 873 + . alignment_id 0 ; Query GL50803_9003-t26_1-p1 ; Align 1499348 1 186 ; Align 1499534 64 447 utg731_pilon exonerate:protein2genome:local gene 1498961 1499302 542 + . gene_id 0 ; sequence GL50803_9004-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1498961 1499302 . + . utg731_pilon exonerate:protein2genome:local exon 1498961 1499302 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1498961 1499302 542 + . alignment_id 0 ; Query GL50803_9004-t26_1-p1 ; Align 1498961 1 342 utg731_pilon exonerate:protein2genome:local gene 1529463 1533032 4918 - . gene_id 0 ; sequence GL50803_90044-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1529463 1533032 . - . utg731_pilon exonerate:protein2genome:local exon 1529463 1533032 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1529463 1533032 4918 - . alignment_id 0 ; Query GL50803_90044-t26_1-p1 ; Align 1533033 1 3570 utg731_pilon exonerate:protein2genome:local gene 1518092 1518295 178 - . gene_id 0 ; sequence GL50803_90056-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1518092 1518295 . - . utg731_pilon exonerate:protein2genome:local exon 1518092 1518295 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1518092 1518295 178 - . alignment_id 0 ; Query GL50803_90056-t26_1-p1 ; Align 1518296 1 204 utg731_pilon exonerate:protein2genome:local gene 1493323 1498788 7039 - . gene_id 0 ; sequence GL50803_9007-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1493323 1498788 . - . utg731_pilon exonerate:protein2genome:local exon 1493323 1498788 . - . insertions 3 ; deletions 8 utg731_pilon exonerate:protein2genome:local similarity 1493323 1498788 7039 - . alignment_id 0 ; Query GL50803_9007-t26_1-p1 ; Align 1498789 1 1029 ; Align 1497757 344 1341 ; Align 1496416 792 375 ; Align 1496041 922 36 ; Align 1496005 936 2682 utg731_pilon exonerate:protein2genome:local gene 1492349 1493257 1428 - . gene_id 0 ; sequence GL50803_9008-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1492349 1493257 . - . utg731_pilon exonerate:protein2genome:local exon 1492349 1493257 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1492349 1493257 1428 - . alignment_id 0 ; Query GL50803_9008-t26_1-p1 ; Align 1493258 1 909 utg308_pilon exonerate:protein2genome:local gene 24146 24414 331 - . gene_id 0 ; sequence GL50803_90089-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 24146 24414 . - . utg308_pilon exonerate:protein2genome:local exon 24146 24414 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg308_pilon exonerate:protein2genome:local similarity 24146 24414 331 - . alignment_id 0 ; Query GL50803_90089-t26_1-p1 ; Align 24415 1 84 ; Align 24329 29 183 utg731_pilon exonerate:protein2genome:local gene 1487063 1488925 2894 - . gene_id 0 ; sequence GL50803_9011-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1487063 1488925 . - . utg731_pilon exonerate:protein2genome:local exon 1487063 1488925 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1487063 1488925 2894 - . alignment_id 0 ; Query GL50803_9011-t26_1-p1 ; Align 1488926 1 1863 utg11_pilon exonerate:protein2genome:local gene 830448 838091 9735 + . gene_id 0 ; sequence GL50803_90122-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 830448 838091 . + . utg11_pilon exonerate:protein2genome:local exon 830448 838091 . + . insertions 27 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 830448 838091 9735 + . alignment_id 0 ; Query GL50803_90122-t26_1-p1 ; Align 830448 1 402 ; Align 830862 135 1065 ; Align 831936 490 261 ; Align 832197 579 399 ; Align 832599 712 948 ; Align 833547 1029 528 ; Align 834075 1206 2823 ; Align 836901 2147 189 ; Align 837090 2211 1002 utg11_pilon exonerate:protein2genome:local gene 829160 829747 790 + . gene_id 0 ; sequence GL50803_90125-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 829160 829747 . + . utg11_pilon exonerate:protein2genome:local exon 829160 829747 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 829160 829747 790 + . alignment_id 0 ; Query GL50803_90125-t26_1-p1 ; Align 829160 1 588 utg11_pilon exonerate:protein2genome:local gene 844442 849778 6554 + . gene_id 0 ; sequence GL50803_90131-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 844442 849778 . + . utg11_pilon exonerate:protein2genome:local exon 844442 849778 . + . insertions 6 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 844442 849778 6554 + . alignment_id 0 ; Query GL50803_90131-t26_1-p1 ; Align 844442 4 2355 ; Align 846803 789 1860 ; Align 848663 1410 552 ; Align 849215 1595 564 utg308_pilon exonerate:protein2genome:local gene 836906 837151 304 - . gene_id 0 ; sequence GL50803_90195-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 836906 837151 . - . utg308_pilon exonerate:protein2genome:local exon 836906 837151 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 836906 837151 304 - . alignment_id 0 ; Query GL50803_90195-t26_1-p1 ; Align 837152 1 246 utg349_pilon exonerate:protein2genome:local gene 82073 89176 375 + . gene_id 0 ; sequence GL50803_90198-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 82073 82240 . + . utg349_pilon exonerate:protein2genome:local exon 82073 82240 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 82241 82242 . + . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 82241 87747 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 87746 87747 . + . intron_id 0 ; splice_site "AC" utg349_pilon exonerate:protein2genome:local cds 87748 87884 . + . utg349_pilon exonerate:protein2genome:local exon 87748 87884 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 87885 87886 . + . intron_id 2 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 87885 89013 . + . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 89012 89013 . + . intron_id 1 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 89014 89176 . + . utg349_pilon exonerate:protein2genome:local exon 89014 89176 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 82073 89176 375 + . alignment_id 0 ; Query GL50803_90198-t26_1-p1 ; Align 82073 20 168 ; Align 87748 76 135 ; Align 89015 122 162 utg11_pilon exonerate:protein2genome:local gene 862791 1019009 857 + . gene_id 0 ; sequence GL50803_90215-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 862791 863339 . + . utg11_pilon exonerate:protein2genome:local exon 862791 863339 . + . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local splice5 863340 863341 . + . intron_id 1 ; splice_site "GC" utg11_pilon exonerate:protein2genome:local intron 863340 1018865 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 1018864 1018865 . + . intron_id 0 ; splice_site "AC" utg11_pilon exonerate:protein2genome:local cds 1018866 1019009 . + . utg11_pilon exonerate:protein2genome:local exon 1018866 1019009 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 862791 1019009 857 + . alignment_id 0 ; Query GL50803_90215-t26_1-p1 ; Align 862791 2 69 ; Align 862860 27 291 ; Align 863151 126 189 ; Align 1018866 189 144 utg212_pilon exonerate:protein2genome:local gene 265446 268652 4278 - . gene_id 0 ; sequence GL50803_90236-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 265446 268652 . - . utg212_pilon exonerate:protein2genome:local exon 265446 268652 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 265446 268652 4278 - . alignment_id 0 ; Query GL50803_90236-t26_1-p1 ; Align 268653 1 3207 utg265_pilon exonerate:protein2genome:local gene 872411 872596 180 - . gene_id 0 ; sequence GL50803_90244-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 872411 872596 . - . utg265_pilon exonerate:protein2genome:local exon 872411 872596 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 872411 872596 180 - . alignment_id 0 ; Query GL50803_90244-t26_1-p1 ; Align 872597 13 186 utg47_pilon exonerate:protein2genome:local gene 581233 582222 1485 + . gene_id 0 ; sequence GL50803_9030-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 581233 582222 . + . utg47_pilon exonerate:protein2genome:local exon 581233 582222 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 581233 582222 1485 + . alignment_id 0 ; Query GL50803_9030-t26_1-p1 ; Align 581233 1 990 utg11_pilon exonerate:protein2genome:local gene 355690 355881 199 + . gene_id 0 ; sequence GL50803_90306-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 355690 355881 . + . utg11_pilon exonerate:protein2genome:local exon 355690 355881 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 355690 355881 199 + . alignment_id 0 ; Query GL50803_90306-t26_1-p1 ; Align 355690 8 192 utg11_pilon exonerate:protein2genome:local gene 297914 299617 2564 + . gene_id 0 ; sequence GL50803_90343-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 297914 299617 . + . utg11_pilon exonerate:protein2genome:local exon 297914 299617 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 297914 299617 2564 + . alignment_id 0 ; Query GL50803_90343-t26_1-p1 ; Align 297914 1 1704 utg11_pilon exonerate:protein2genome:local gene 287576 287773 260 - . gene_id 0 ; sequence GL50803_90357-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 287576 287773 . - . utg11_pilon exonerate:protein2genome:local exon 287576 287773 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 287576 287773 260 - . alignment_id 0 ; Query GL50803_90357-t26_1-p1 ; Align 287774 2 198 utg47_pilon exonerate:protein2genome:local gene 577021 578175 1855 - . gene_id 0 ; sequence GL50803_9036-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 577021 578175 . - . utg47_pilon exonerate:protein2genome:local exon 577021 578175 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 577021 578175 1855 - . alignment_id 0 ; Query GL50803_9036-t26_1-p1 ; Align 578176 1 1155 utg47_pilon exonerate:protein2genome:local gene 573915 575769 2753 + . gene_id 0 ; sequence GL50803_9038-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 573915 575769 . + . utg47_pilon exonerate:protein2genome:local exon 573915 575769 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 573915 575769 2753 + . alignment_id 0 ; Query GL50803_9038-t26_1-p1 ; Align 573915 1 1728 ; Align 575644 577 126 utg64_pilon exonerate:protein2genome:local gene 252568 253131 846 + . gene_id 0 ; sequence GL50803_90402-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 252568 253131 . + . utg64_pilon exonerate:protein2genome:local exon 252568 253131 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 252568 253131 846 + . alignment_id 0 ; Query GL50803_90402-t26_1-p1 ; Align 252568 1 564 utg64_pilon exonerate:protein2genome:local gene 249158 249379 269 + . gene_id 0 ; sequence GL50803_90406-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 249158 249379 . + . utg64_pilon exonerate:protein2genome:local exon 249158 249379 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 249158 249379 269 + . alignment_id 0 ; Query GL50803_90406-t26_1-p1 ; Align 249158 1 222 utg64_pilon exonerate:protein2genome:local gene 274414 277326 3612 + . gene_id 0 ; sequence GL50803_90418-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 274414 277326 . + . utg64_pilon exonerate:protein2genome:local exon 274414 277326 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 274414 277326 3612 + . alignment_id 0 ; Query GL50803_90418-t26_1-p1 ; Align 274414 1 2913 utg64_pilon exonerate:protein2genome:local gene 236743 236991 178 + . gene_id 0 ; sequence GL50803_90421-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 236743 236991 . + . utg64_pilon exonerate:protein2genome:local exon 236743 236991 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 236743 236991 178 + . alignment_id 0 ; Query GL50803_90421-t26_1-p1 ; Align 236743 1 249 utg64_pilon exonerate:protein2genome:local gene 233562 235112 2347 - . gene_id 0 ; sequence GL50803_90425-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 233562 235112 . - . utg64_pilon exonerate:protein2genome:local exon 233562 235112 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 233562 235112 2347 - . alignment_id 0 ; Query GL50803_90425-t26_1-p1 ; Align 235113 1 1551 utg47_pilon exonerate:protein2genome:local gene 534183 535328 1740 + . gene_id 0 ; sequence GL50803_9043-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 534183 535328 . + . utg47_pilon exonerate:protein2genome:local exon 534183 535328 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 534183 535328 1740 + . alignment_id 0 ; Query GL50803_9043-t26_1-p1 ; Align 534183 1 1086 ; Align 535269 364 60 utg64_pilon exonerate:protein2genome:local gene 268172 272371 4989 + . gene_id 0 ; sequence GL50803_90434-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 268172 272371 . + . utg64_pilon exonerate:protein2genome:local exon 268172 272371 . + . insertions 6 ; deletions 6 utg64_pilon exonerate:protein2genome:local similarity 268172 272371 4989 + . alignment_id 0 ; Query GL50803_90434-t26_1-p1 ; Align 268172 21 321 ; Align 268499 128 105 ; Align 268604 167 33 ; Align 268637 180 3735 utg47_pilon exonerate:protein2genome:local gene 535385 536349 1410 - . gene_id 0 ; sequence GL50803_9045-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 535385 536349 . - . utg47_pilon exonerate:protein2genome:local exon 535385 536349 . - . insertions 0 ; deletions 3 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 535385 536349 1410 - . alignment_id 0 ; Query GL50803_9045-t26_1-p1 ; Align 536350 1 72 ; Align 536278 27 222 ; Align 536054 102 669 utg47_pilon exonerate:protein2genome:local gene 536464 537798 1925 + . gene_id 0 ; sequence GL50803_9046-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 536464 537798 . + . utg47_pilon exonerate:protein2genome:local exon 536464 537798 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 536464 537798 1925 + . alignment_id 0 ; Query GL50803_9046-t26_1-p1 ; Align 536464 1 1335 utg47_pilon exonerate:protein2genome:local gene 538749 539699 814 + . gene_id 0 ; sequence GL50803_9048-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 538749 539699 . + . utg47_pilon exonerate:protein2genome:local exon 538749 539699 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 538749 539699 814 + . alignment_id 0 ; Query GL50803_9048-t26_1-p1 ; Align 538749 1 852 ; Align 539607 285 93 utg47_pilon exonerate:protein2genome:local gene 543358 543537 238 + . gene_id 0 ; sequence GL50803_9051-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 543358 543537 . + . utg47_pilon exonerate:protein2genome:local exon 543358 543537 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 543358 543537 238 + . alignment_id 0 ; Query GL50803_9051-t26_1-p1 ; Align 543358 1 180 utg11_pilon exonerate:protein2genome:local gene 574488 574726 272 - . gene_id 0 ; sequence GL50803_90540-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 574488 574726 . - . utg11_pilon exonerate:protein2genome:local exon 574488 574726 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 574488 574726 272 - . alignment_id 0 ; Query GL50803_90540-t26_1-p1 ; Align 574727 1 195 ; Align 574532 67 3 ; Align 574527 68 39 utg11_pilon exonerate:protein2genome:local gene 629095 629361 232 + . gene_id 0 ; sequence GL50803_90551-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 629095 629361 . + . utg11_pilon exonerate:protein2genome:local exon 629095 629361 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 629095 629361 232 + . alignment_id 0 ; Query GL50803_90551-t26_1-p1 ; Align 629095 1 267 utg349_pilon exonerate:protein2genome:local gene 1664064 1664897 1035 - . gene_id 0 ; sequence GL50803_9057-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1664064 1664897 . - . utg349_pilon exonerate:protein2genome:local exon 1664064 1664897 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1664064 1664897 1035 - . alignment_id 0 ; Query GL50803_9057-t26_1-p1 ; Align 1664898 1 585 ; Align 1664313 197 249 utg731_pilon exonerate:protein2genome:local gene 1435111 1437651 3313 + . gene_id 0 ; sequence GL50803_90575-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1435111 1437651 . + . utg731_pilon exonerate:protein2genome:local exon 1435111 1437651 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1435111 1437651 3313 + . alignment_id 0 ; Query GL50803_90575-t26_1-p1 ; Align 1435111 1 2541 utg349_pilon exonerate:protein2genome:local gene 1662671 1664008 2052 + . gene_id 0 ; sequence GL50803_9058-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1662671 1664008 . + . utg349_pilon exonerate:protein2genome:local exon 1662671 1664008 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1662671 1664008 2052 + . alignment_id 0 ; Query GL50803_9058-t26_1-p1 ; Align 1662671 1 771 ; Align 1663442 259 567 utg731_pilon exonerate:protein2genome:local gene 1450633 1450887 300 - . gene_id 0 ; sequence GL50803_90587-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1450633 1450887 . - . utg731_pilon exonerate:protein2genome:local exon 1450633 1450887 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1450633 1450887 300 - . alignment_id 0 ; Query GL50803_90587-t26_1-p1 ; Align 1450888 3 255 utg349_pilon exonerate:protein2genome:local gene 1661826 1662536 1103 + . gene_id 0 ; sequence GL50803_9060-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1661826 1662536 . + . utg349_pilon exonerate:protein2genome:local exon 1661826 1662536 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1661826 1662536 1103 + . alignment_id 0 ; Query GL50803_9060-t26_1-p1 ; Align 1661826 1 711 utg349_pilon exonerate:protein2genome:local gene 1658258 1660816 4065 - . gene_id 0 ; sequence GL50803_9062-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1658258 1660816 . - . utg349_pilon exonerate:protein2genome:local exon 1658258 1660816 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1658258 1660816 4065 - . alignment_id 0 ; Query GL50803_9062-t26_1-p1 ; Align 1660817 1 2559 utg731_pilon exonerate:protein2genome:local gene 155215 155490 165 + . gene_id 0 ; sequence GL50803_90628-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 155215 155490 . + . utg731_pilon exonerate:protein2genome:local exon 155215 155490 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 155215 155490 165 + . alignment_id 0 ; Query GL50803_90628-t26_1-p1 ; Align 155215 3 276 utg265_pilon exonerate:protein2genome:local gene 871220 871489 239 + . gene_id 0 ; sequence GL50803_90643-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 871220 871489 . + . utg265_pilon exonerate:protein2genome:local exon 871220 871489 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 871220 871489 239 + . alignment_id 0 ; Query GL50803_90643-t26_1-p1 ; Align 871220 2 270 utg265_pilon exonerate:protein2genome:local gene 871997 872416 185 + . gene_id 0 ; sequence GL50803_90644-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 871997 872416 . + . utg265_pilon exonerate:protein2genome:local exon 871997 872416 . + . insertions 18 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 871997 872416 185 + . alignment_id 0 ; Query GL50803_90644-t26_1-p1 ; Align 871997 2 42 ; Align 872042 16 129 ; Align 872186 59 231 utg212_pilon exonerate:protein2genome:local gene 452893 454128 1033 - . gene_id 0 ; sequence GL50803_90659-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 452893 454128 . - . utg212_pilon exonerate:protein2genome:local exon 452893 454128 . - . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local similarity 452893 454128 1033 - . alignment_id 0 ; Query GL50803_90659-t26_1-p1 ; Align 454129 1 1107 ; Align 453022 371 129 utg212_pilon exonerate:protein2genome:local gene 457053 460652 4192 + . gene_id 0 ; sequence GL50803_90665-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 457053 460652 . + . utg212_pilon exonerate:protein2genome:local exon 457053 460652 . + . insertions 9 ; deletions 7 ; frameshifts 3 utg212_pilon exonerate:protein2genome:local similarity 457053 460652 4192 + . alignment_id 0 ; Query GL50803_90665-t26_1-p1 ; Align 457053 2 318 ; Align 457372 108 375 ; Align 457747 234 645 ; Align 458393 449 66 ; Align 458459 474 210 ; Align 458672 544 108 ; Align 458786 580 90 ; Align 458876 612 720 ; Align 459596 853 240 ; Align 459837 933 816 utg349_pilon exonerate:protein2genome:local gene 1627773 1628231 711 - . gene_id 0 ; sequence GL50803_9068-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1627773 1628231 . - . utg349_pilon exonerate:protein2genome:local exon 1627773 1628231 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1627773 1628231 711 - . alignment_id 0 ; Query GL50803_9068-t26_1-p1 ; Align 1628232 1 459 utg265_pilon exonerate:protein2genome:local gene 871640 1025375 226 + . gene_id 0 ; sequence GL50803_90689-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 871640 871840 . + . utg265_pilon exonerate:protein2genome:local exon 871640 871840 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 871841 871842 . + . intron_id 1 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 871841 1025267 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 1025266 1025267 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 1025268 1025375 . + . utg265_pilon exonerate:protein2genome:local exon 1025268 1025375 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 871640 1025375 226 + . alignment_id 0 ; Query GL50803_90689-t26_1-p1 ; Align 871640 15 201 ; Align 1025268 82 108 utg308_pilon exonerate:protein2genome:local gene 254665 255381 1097 - . gene_id 0 ; sequence GL50803_90710-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 254665 255381 . - . utg308_pilon exonerate:protein2genome:local exon 254665 255381 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 254665 255381 1097 - . alignment_id 0 ; Query GL50803_90710-t26_1-p1 ; Align 255382 1 717 utg47_pilon exonerate:protein2genome:local gene 1471007 1471573 740 + . gene_id 0 ; sequence GL50803_9072-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1471007 1471573 . + . utg47_pilon exonerate:protein2genome:local exon 1471007 1471573 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1471007 1471573 740 + . alignment_id 0 ; Query GL50803_9072-t26_1-p1 ; Align 1471007 1 489 ; Align 1471496 165 78 utg308_pilon exonerate:protein2genome:local gene 270120 270380 179 - . gene_id 0 ; sequence GL50803_90725-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 270120 270380 . - . utg308_pilon exonerate:protein2genome:local exon 270120 270380 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 270120 270380 179 - . alignment_id 0 ; Query GL50803_90725-t26_1-p1 ; Align 270381 1 261 utg47_pilon exonerate:protein2genome:local gene 1470467 1470970 751 + . gene_id 0 ; sequence GL50803_9073-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1470467 1470970 . + . utg47_pilon exonerate:protein2genome:local exon 1470467 1470970 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1470467 1470970 751 + . alignment_id 0 ; Query GL50803_9073-t26_1-p1 ; Align 1470467 1 504 utg308_pilon exonerate:protein2genome:local gene 170239 175158 6253 - . gene_id 0 ; sequence GL50803_90767-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 170239 175158 . - . utg308_pilon exonerate:protein2genome:local exon 170239 175158 . - . insertions 0 ; deletions 1 utg308_pilon exonerate:protein2genome:local similarity 170239 175158 6253 - . alignment_id 0 ; Query GL50803_90767-t26_1-p1 ; Align 175159 1 2937 ; Align 172222 981 1983 utg47_pilon exonerate:protein2genome:local gene 1458759 1460513 2311 - . gene_id 0 ; sequence GL50803_9077-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1458759 1460513 . - . utg47_pilon exonerate:protein2genome:local exon 1458759 1460513 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1458759 1460513 2311 - . alignment_id 0 ; Query GL50803_9077-t26_1-p1 ; Align 1460514 523 1755 utg47_pilon exonerate:protein2genome:local gene 1457124 1457678 804 + . gene_id 0 ; sequence GL50803_9079-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1457124 1457678 . + . utg47_pilon exonerate:protein2genome:local exon 1457124 1457678 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1457124 1457678 804 + . alignment_id 0 ; Query GL50803_9079-t26_1-p1 ; Align 1457124 1 555 utg308_pilon exonerate:protein2genome:local gene 235220 235582 580 + . gene_id 0 ; sequence GL50803_90819-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 235220 235582 . + . utg308_pilon exonerate:protein2genome:local exon 235220 235582 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 235220 235582 580 + . alignment_id 0 ; Query GL50803_90819-t26_1-p1 ; Align 235220 1 363 utg349_pilon exonerate:protein2genome:local gene 1089109 1089972 1151 + . gene_id 0 ; sequence GL50803_9086-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1089109 1089972 . + . utg349_pilon exonerate:protein2genome:local exon 1089109 1089972 . + . insertions 6 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1089109 1089972 1151 + . alignment_id 0 ; Query GL50803_9086-t26_1-p1 ; Align 1089109 1 759 ; Align 1089874 254 99 utg349_pilon exonerate:protein2genome:local gene 1088554 1089057 824 + . gene_id 0 ; sequence GL50803_9087-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1088554 1089057 . + . utg349_pilon exonerate:protein2genome:local exon 1088554 1089057 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1088554 1089057 824 + . alignment_id 0 ; Query GL50803_9087-t26_1-p1 ; Align 1088554 1 504 utg349_pilon exonerate:protein2genome:local gene 231359 232585 2022 - . gene_id 0 ; sequence GL50803_90872-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 231359 232585 . - . utg349_pilon exonerate:protein2genome:local exon 231359 232585 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 231359 232585 2022 - . alignment_id 0 ; Query GL50803_90872-t26_1-p1 ; Align 232586 1 1227 utg349_pilon exonerate:protein2genome:local gene 1087921 1088478 810 - . gene_id 0 ; sequence GL50803_9088-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1087921 1088478 . - . utg349_pilon exonerate:protein2genome:local exon 1087921 1088478 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1087921 1088478 810 - . alignment_id 0 ; Query GL50803_9088-t26_1-p1 ; Align 1088479 1 558 utg349_pilon exonerate:protein2genome:local gene 1087476 1087868 688 - . gene_id 0 ; sequence GL50803_9089-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1087476 1087868 . - . utg349_pilon exonerate:protein2genome:local exon 1087476 1087868 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1087476 1087868 688 - . alignment_id 0 ; Query GL50803_9089-t26_1-p1 ; Align 1087869 1 393 utg349_pilon exonerate:protein2genome:local gene 1086044 1087423 1800 - . gene_id 0 ; sequence GL50803_9090-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1086044 1087423 . - . utg349_pilon exonerate:protein2genome:local exon 1086044 1087423 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1086044 1087423 1800 - . alignment_id 0 ; Query GL50803_9090-t26_1-p1 ; Align 1087424 1 1380 utg47_pilon exonerate:protein2genome:local gene 947801 948055 234 - . gene_id 0 ; sequence GL50803_90942-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 947801 948055 . - . utg47_pilon exonerate:protein2genome:local exon 947801 948055 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 947801 948055 234 - . alignment_id 0 ; Query GL50803_90942-t26_1-p1 ; Align 948056 1 255 utg47_pilon exonerate:protein2genome:local gene 939956 942628 4068 + . gene_id 0 ; sequence GL50803_90950-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 939956 942628 . + . utg47_pilon exonerate:protein2genome:local exon 939956 942628 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 939956 942628 4068 + . alignment_id 0 ; Query GL50803_90950-t26_1-p1 ; Align 939956 1 2673 utg47_pilon exonerate:protein2genome:local gene 928964 929207 208 + . gene_id 0 ; sequence GL50803_90963-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 928964 929207 . + . utg47_pilon exonerate:protein2genome:local exon 928964 929207 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 928964 929207 208 + . alignment_id 0 ; Query GL50803_90963-t26_1-p1 ; Align 928964 1 168 ; Align 929133 57 75 utg349_pilon exonerate:protein2genome:local gene 1075622 1076998 1864 + . gene_id 0 ; sequence GL50803_9098-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1075622 1076998 . + . utg349_pilon exonerate:protein2genome:local exon 1075622 1076998 . + . insertions 0 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 1075622 1076998 1864 + . alignment_id 0 ; Query GL50803_9098-t26_1-p1 ; Align 1075622 1 375 ; Align 1075997 128 108 ; Align 1076105 166 138 ; Align 1076243 213 414 ; Align 1076657 352 342 utg349_pilon exonerate:protein2genome:local gene 1074178 1074861 970 + . gene_id 0 ; sequence GL50803_9099-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1074178 1074861 . + . utg349_pilon exonerate:protein2genome:local exon 1074178 1074861 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1074178 1074861 970 + . alignment_id 0 ; Query GL50803_9099-t26_1-p1 ; Align 1074178 1 684 utg731_pilon exonerate:protein2genome:local gene 1198240 1198503 215 + . gene_id 0 ; sequence GL50803_91051-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1198240 1198503 . + . utg731_pilon exonerate:protein2genome:local exon 1198240 1198503 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1198240 1198503 215 + . alignment_id 0 ; Query GL50803_91051-t26_1-p1 ; Align 1198240 5 264 utg731_pilon exonerate:protein2genome:local gene 1195263 1196543 2174 - . gene_id 0 ; sequence GL50803_91056-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1195263 1196543 . - . utg731_pilon exonerate:protein2genome:local exon 1195263 1196543 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1195263 1196543 2174 - . alignment_id 0 ; Query GL50803_91056-t26_1-p1 ; Align 1196544 1 1281 utg731_pilon exonerate:protein2genome:local gene 1263461 1267588 6087 + . gene_id 0 ; sequence GL50803_91099-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1263461 1267588 . + . utg731_pilon exonerate:protein2genome:local exon 1263461 1267588 . + . insertions 6 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1263461 1267588 6087 + . alignment_id 0 ; Query GL50803_91099-t26_1-p1 ; Align 1263461 1 2634 ; Align 1266098 879 696 ; Align 1266797 1111 792 utg47_pilon exonerate:protein2genome:local gene 59571 59870 288 - . gene_id 0 ; sequence GL50803_91122-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 59571 59870 . - . utg47_pilon exonerate:protein2genome:local exon 59571 59870 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 59571 59870 288 - . alignment_id 0 ; Query GL50803_91122-t26_1-p1 ; Align 59871 1 300 utg47_pilon exonerate:protein2genome:local gene 64856 65680 1103 + . gene_id 0 ; sequence GL50803_91127-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 64856 65680 . + . utg47_pilon exonerate:protein2genome:local exon 64856 65680 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 64856 65680 1103 + . alignment_id 0 ; Query GL50803_91127-t26_1-p1 ; Align 64856 1 825 utg265_pilon exonerate:protein2genome:local gene 1041566 1043317 2809 + . gene_id 0 ; sequence GL50803_9115-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1041566 1043317 . + . utg265_pilon exonerate:protein2genome:local exon 1041566 1043317 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1041566 1043317 2809 + . alignment_id 0 ; Query GL50803_9115-t26_1-p1 ; Align 1041566 1 1752 utg265_pilon exonerate:protein2genome:local gene 1043626 1044735 1899 - . gene_id 0 ; sequence GL50803_9116-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1043626 1044735 . - . utg265_pilon exonerate:protein2genome:local exon 1043626 1044735 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1043626 1044735 1899 - . alignment_id 0 ; Query GL50803_9116-t26_1-p1 ; Align 1044736 1 1110 utg265_pilon exonerate:protein2genome:local gene 1044797 1046173 1993 - . gene_id 0 ; sequence GL50803_9117-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1044797 1046173 . - . utg265_pilon exonerate:protein2genome:local exon 1044797 1046173 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1044797 1046173 1993 - . alignment_id 0 ; Query GL50803_9117-t26_1-p1 ; Align 1046174 1 1377 utg265_pilon exonerate:protein2genome:local gene 1046270 1047307 1450 - . gene_id 0 ; sequence GL50803_9118-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1046270 1047307 . - . utg265_pilon exonerate:protein2genome:local exon 1046270 1047307 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1046270 1047307 1450 - . alignment_id 0 ; Query GL50803_9118-t26_1-p1 ; Align 1047308 1 1038 utg308_pilon exonerate:protein2genome:local gene 124868 125086 266 - . gene_id 0 ; sequence GL50803_91181-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 124868 125086 . - . utg308_pilon exonerate:protein2genome:local exon 124868 125086 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 124868 125086 266 - . alignment_id 0 ; Query GL50803_91181-t26_1-p1 ; Align 125087 1 219 utg308_pilon exonerate:protein2genome:local gene 131331 131747 520 + . gene_id 0 ; sequence GL50803_91187-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 131331 131747 . + . utg308_pilon exonerate:protein2genome:local exon 131331 131747 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 131331 131747 520 + . alignment_id 0 ; Query GL50803_91187-t26_1-p1 ; Align 131331 1 417 utg265_pilon exonerate:protein2genome:local gene 1047492 1048838 2094 + . gene_id 0 ; sequence GL50803_9119-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1047492 1048838 . + . utg265_pilon exonerate:protein2genome:local exon 1047492 1048838 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1047492 1048838 2094 + . alignment_id 0 ; Query GL50803_9119-t26_1-p1 ; Align 1047492 1 1347 utg11_pilon exonerate:protein2genome:local gene 83333 83773 722 + . gene_id 0 ; sequence GL50803_91198-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 83333 83773 . + . utg11_pilon exonerate:protein2genome:local exon 83333 83773 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 83333 83773 722 + . alignment_id 0 ; Query GL50803_91198-t26_1-p1 ; Align 83333 1 441 utg11_pilon exonerate:protein2genome:local gene 67325 67726 381 + . gene_id 0 ; sequence GL50803_91207-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 67325 67726 . + . utg11_pilon exonerate:protein2genome:local exon 67325 67726 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 67325 67726 381 + . alignment_id 0 ; Query GL50803_91207-t26_1-p1 ; Align 67325 1 402 utg265_pilon exonerate:protein2genome:local gene 1048849 1049986 1757 - . gene_id 0 ; sequence GL50803_9121-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1048849 1049986 . - . utg265_pilon exonerate:protein2genome:local exon 1048849 1049986 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 1048849 1049986 1757 - . alignment_id 0 ; Query GL50803_9121-t26_1-p1 ; Align 1049987 1 396 ; Align 1049590 133 741 utg11_pilon exonerate:protein2genome:local gene 58711 58911 213 - . gene_id 0 ; sequence GL50803_91214-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 58711 58911 . - . utg11_pilon exonerate:protein2genome:local exon 58711 58911 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 58711 58911 213 - . alignment_id 0 ; Query GL50803_91214-t26_1-p1 ; Align 58912 1 201 utg11_pilon exonerate:protein2genome:local gene 53920 57348 5524 + . gene_id 0 ; sequence GL50803_91220-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 53920 57348 . + . utg11_pilon exonerate:protein2genome:local exon 53920 57348 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 53920 57348 5524 + . alignment_id 0 ; Query GL50803_91220-t26_1-p1 ; Align 53920 2 3429 utg11_pilon exonerate:protein2genome:local gene 1013027 1014841 2226 - . gene_id 0 ; sequence GL50803_91252-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1013027 1014841 . - . utg11_pilon exonerate:protein2genome:local exon 1013027 1014841 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1013027 1014841 2226 - . alignment_id 0 ; Query GL50803_91252-t26_1-p1 ; Align 1014842 1 492 ; Align 1014347 165 1320 utg11_pilon exonerate:protein2genome:local gene 808595 808903 163 - . gene_id 0 ; sequence GL50803_91266-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 808595 808903 . - . utg11_pilon exonerate:protein2genome:local exon 808595 808903 . - . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 808595 808903 163 - . alignment_id 0 ; Query GL50803_91266-t26_1-p1 ; Align 808904 1 126 ; Align 808772 43 177 utg349_pilon exonerate:protein2genome:local gene 109973 111298 1193 + . gene_id 0 ; sequence GL50803_9128-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 109973 111298 . + . utg349_pilon exonerate:protein2genome:local exon 109973 111298 . + . insertions 3 ; deletions 5 ; frameshifts 3 utg349_pilon exonerate:protein2genome:local similarity 109973 111298 1193 + . alignment_id 0 ; Query GL50803_9128-t26_1-p1 ; Align 109973 1 225 ; Align 110200 77 126 ; Align 110326 120 51 ; Align 110377 138 402 ; Align 110779 273 33 ; Align 110812 285 3 ; Align 110816 286 360 ; Align 111179 406 120 utg11_pilon exonerate:protein2genome:local gene 776619 778895 3179 + . gene_id 0 ; sequence GL50803_91295-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 776619 778895 . + . utg11_pilon exonerate:protein2genome:local exon 776619 778895 . + . insertions 0 ; deletions 11 ; frameshifts 3 utg11_pilon exonerate:protein2genome:local similarity 776619 778895 3179 + . alignment_id 0 ; Query GL50803_91295-t26_1-p1 ; Align 776619 1 678 ; Align 777298 227 186 ; Align 777486 290 924 ; Align 778410 602 60 ; Align 778470 624 57 ; Align 778527 647 369 utg349_pilon exonerate:protein2genome:local gene 107457 108343 1256 + . gene_id 0 ; sequence GL50803_9130-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 107457 108343 . + . utg349_pilon exonerate:protein2genome:local exon 107457 108343 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 107457 108343 1256 + . alignment_id 0 ; Query GL50803_9130-t26_1-p1 ; Align 107457 1 360 ; Align 107817 122 9 ; Align 107828 125 21 ; Align 107849 133 495 utg349_pilon exonerate:protein2genome:local gene 106634 107153 498 + . gene_id 0 ; sequence GL50803_9132-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 106634 107153 . + . utg349_pilon exonerate:protein2genome:local exon 106634 107153 . + . insertions 3 ; deletions 0 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 106634 107153 498 + . alignment_id 0 ; Query GL50803_9132-t26_1-p1 ; Align 106634 1 156 ; Align 106793 53 123 ; Align 106917 94 237 utg11_pilon exonerate:protein2genome:local gene 737851 746770 12107 + . gene_id 0 ; sequence GL50803_91324-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 737851 746770 . + . utg11_pilon exonerate:protein2genome:local exon 737851 746770 . + . insertions 3 ; deletions 10 ; frameshifts 7 utg11_pilon exonerate:protein2genome:local similarity 737851 746770 12107 + . alignment_id 0 ; Query GL50803_91324-t26_1-p1 ; Align 737851 1 1035 ; Align 738888 347 1221 ; Align 740109 757 1770 ; Align 741880 1347 936 ; Align 742819 1659 555 ; Align 743374 1847 1224 ; Align 744600 2256 54 ; Align 744654 2275 1083 ; Align 745739 2637 1032 utg349_pilon exonerate:protein2genome:local gene 103956 106653 3767 + . gene_id 0 ; sequence GL50803_9133-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 103956 106653 . + . utg349_pilon exonerate:protein2genome:local exon 103956 106653 . + . insertions 0 ; deletions 4 ; frameshifts 1 utg349_pilon exonerate:protein2genome:local similarity 103956 106653 3767 + . alignment_id 0 ; Query GL50803_9133-t26_1-p1 ; Align 103956 1 2139 ; Align 106096 714 327 ; Align 106423 827 231 utg47_pilon exonerate:protein2genome:local gene 263098 266109 4375 + . gene_id 0 ; sequence GL50803_91334-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 263098 266109 . + . utg47_pilon exonerate:protein2genome:local exon 263098 266109 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 263098 266109 4375 + . alignment_id 0 ; Query GL50803_91334-t26_1-p1 ; Align 263098 1 1206 ; Align 264307 403 1803 utg349_pilon exonerate:protein2genome:local gene 96411 103786 11445 + . gene_id 0 ; sequence GL50803_9134-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 96411 103786 . + . utg349_pilon exonerate:protein2genome:local exon 96411 103786 . + . insertions 0 ; deletions 3 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 96411 103786 11445 + . alignment_id 0 ; Query GL50803_9134-t26_1-p1 ; Align 96411 1 2682 ; Align 99093 896 2271 ; Align 101366 1654 408 ; Align 101774 1791 2013 utg47_pilon exonerate:protein2genome:local gene 276619 278988 3436 + . gene_id 0 ; sequence GL50803_91348-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 276619 278988 . + . utg47_pilon exonerate:protein2genome:local exon 276619 278988 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 276619 278988 3436 + . alignment_id 0 ; Query GL50803_91348-t26_1-p1 ; Align 276619 15 2370 utg47_pilon exonerate:protein2genome:local gene 280050 280385 249 + . gene_id 0 ; sequence GL50803_91349-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 280050 280385 . + . utg47_pilon exonerate:protein2genome:local exon 280050 280385 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 280050 280385 249 + . alignment_id 0 ; Query GL50803_91349-t26_1-p1 ; Align 280050 1 336 utg47_pilon exonerate:protein2genome:local gene 251579 256833 3179 + . gene_id 0 ; sequence GL50803_91354-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 251579 252191 . + . utg47_pilon exonerate:protein2genome:local exon 251579 252191 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 252192 252193 . + . intron_id 1 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 252192 255601 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 255600 255601 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 255602 256833 . + . utg47_pilon exonerate:protein2genome:local exon 255602 256833 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 251579 256833 3179 + . alignment_id 0 ; Query GL50803_91354-t26_1-p1 ; Align 251579 1 612 ; Align 255604 206 1230 utg47_pilon exonerate:protein2genome:local gene 545257 547858 3997 + . gene_id 0 ; sequence GL50803_91374-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 545257 547858 . + . utg47_pilon exonerate:protein2genome:local exon 545257 547858 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 545257 547858 3997 + . alignment_id 0 ; Query GL50803_91374-t26_1-p1 ; Align 545257 1 2016 ; Align 547274 673 585 utg47_pilon exonerate:protein2genome:local gene 575868 576857 1440 - . gene_id 0 ; sequence GL50803_91398-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 575868 576857 . - . utg47_pilon exonerate:protein2genome:local exon 575868 576857 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 575868 576857 1440 - . alignment_id 0 ; Query GL50803_91398-t26_1-p1 ; Align 576858 1 990 utg349_pilon exonerate:protein2genome:local gene 799588 799830 181 + . gene_id 0 ; sequence GL50803_91427-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 799588 799830 . + . utg349_pilon exonerate:protein2genome:local exon 799588 799830 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 799588 799830 181 + . alignment_id 0 ; Query GL50803_91427-t26_1-p1 ; Align 799588 1 243 utg47_pilon exonerate:protein2genome:local gene 282125 285415 3799 - . gene_id 0 ; sequence GL50803_9143-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 282125 285415 . - . utg47_pilon exonerate:protein2genome:local exon 282125 285415 . - . insertions 15 ; deletions 9 utg47_pilon exonerate:protein2genome:local similarity 282125 285415 3799 - . alignment_id 0 ; Query GL50803_9143-t26_1-p1 ; Align 285416 1 54 ; Align 285362 20 1140 ; Align 284222 403 1305 ; Align 282902 838 90 ; Align 282812 869 531 ; Align 282281 1050 156 utg47_pilon exonerate:protein2genome:local gene 279042 281120 2781 - . gene_id 0 ; sequence GL50803_9145-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 279042 281120 . - . utg47_pilon exonerate:protein2genome:local exon 279042 281120 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 279042 281120 2781 - . alignment_id 0 ; Query GL50803_9145-t26_1-p1 ; Align 281121 1 2079 utg349_pilon exonerate:protein2genome:local gene 823428 825692 3338 + . gene_id 0 ; sequence GL50803_91451-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 823428 825692 . + . utg349_pilon exonerate:protein2genome:local exon 823428 825692 . + . insertions 15 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 823428 825692 3338 + . alignment_id 0 ; Query GL50803_91451-t26_1-p1 ; Align 823428 1 1215 ; Align 824658 406 1035 utg47_pilon exonerate:protein2genome:local gene 278619 278930 414 - . gene_id 0 ; sequence GL50803_9146-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 278619 278930 . - . utg47_pilon exonerate:protein2genome:local exon 278619 278930 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 278619 278930 414 - . alignment_id 0 ; Query GL50803_9146-t26_1-p1 ; Align 278931 1 312 utg349_pilon exonerate:protein2genome:local gene 793925 794953 1353 - . gene_id 0 ; sequence GL50803_91463-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 793925 794953 . - . utg349_pilon exonerate:protein2genome:local exon 793925 794953 . - . insertions 12 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 793925 794953 1353 - . alignment_id 0 ; Query GL50803_91463-t26_1-p1 ; Align 794954 1 210 ; Align 794738 71 279 ; Align 794453 164 528 utg99_pilon exonerate:protein2genome:local gene 217608 219161 2569 + . gene_id 0 ; sequence GL50803_91476-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 217608 219161 . + . utg99_pilon exonerate:protein2genome:local exon 217608 219161 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 217608 219161 2569 + . alignment_id 0 ; Query GL50803_91476-t26_1-p1 ; Align 217608 551 1554 utg47_pilon exonerate:protein2genome:local gene 275768 276403 1055 - . gene_id 0 ; sequence GL50803_9148-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 275768 276403 . - . utg47_pilon exonerate:protein2genome:local exon 275768 276403 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 275768 276403 1055 - . alignment_id 0 ; Query GL50803_9148-t26_1-p1 ; Align 276404 1 636 utg99_pilon exonerate:protein2genome:local gene 210511 215643 7511 - . gene_id 0 ; sequence GL50803_91480-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 210511 215643 . - . utg99_pilon exonerate:protein2genome:local exon 210511 215643 . - . insertions 9 ; deletions 4 utg99_pilon exonerate:protein2genome:local similarity 210511 215643 7511 - . alignment_id 0 ; Query GL50803_91480-t26_1-p1 ; Align 215644 1 1776 ; Align 213868 595 18 ; Align 213850 602 186 ; Align 213655 664 594 ; Align 213061 863 2550 utg47_pilon exonerate:protein2genome:local gene 273767 275719 2022 + . gene_id 0 ; sequence GL50803_9150-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 273767 275719 . + . utg47_pilon exonerate:protein2genome:local exon 273767 275719 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 273767 275719 2022 + . alignment_id 0 ; Query GL50803_9150-t26_1-p1 ; Align 273767 1 1233 ; Align 275000 413 720 utg99_pilon exonerate:protein2genome:local gene 221439 231970 11345 - . gene_id 0 ; sequence GL50803_91504-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 221439 231970 . - . utg99_pilon exonerate:protein2genome:local exon 221439 231970 . - . insertions 48 ; deletions 19 ; frameshifts 5 utg99_pilon exonerate:protein2genome:local similarity 221439 231970 11345 - . alignment_id 0 ; Query GL50803_91504-t26_1-p1 ; Align 231971 1380 675 ; Align 231296 1606 729 ; Align 230564 1849 207 ; Align 230357 1921 252 ; Align 230105 2006 153 ; Align 229946 2057 36 ; Align 229907 2069 60 ; Align 229847 2090 687 ; Align 229160 2320 267 ; Align 228893 2410 132 ; Align 228761 2455 276 ; Align 228479 2547 693 ; Align 227782 2778 114 ; Align 227667 2816 711 ; Align 226956 3054 876 ; Align 226071 3346 222 ; Align 225849 3422 123 ; Align 225726 3464 660 ; Align 225063 3684 174 ; Align 224889 3743 192 ; Align 224697 3810 1392 ; Align 223296 4274 156 ; Align 223140 4327 717 ; Align 222414 4566 699 ; Align 221715 4800 276 utg99_pilon exonerate:protein2genome:local gene 221187 221384 285 + . gene_id 0 ; sequence GL50803_91505-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 221187 221384 . + . utg99_pilon exonerate:protein2genome:local exon 221187 221384 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 221187 221384 285 + . alignment_id 0 ; Query GL50803_91505-t26_1-p1 ; Align 221187 1 198 utg64_pilon exonerate:protein2genome:local gene 312268 312774 489 + . gene_id 0 ; sequence GL50803_91519-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 312268 312774 . + . utg64_pilon exonerate:protein2genome:local exon 312268 312774 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 312268 312774 489 + . alignment_id 0 ; Query GL50803_91519-t26_1-p1 ; Align 312268 1 507 utg47_pilon exonerate:protein2genome:local gene 267932 268942 1118 - . gene_id 0 ; sequence GL50803_9154-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 267932 268942 . - . utg47_pilon exonerate:protein2genome:local exon 267932 268942 . - . insertions 3 ; deletions 2 utg47_pilon exonerate:protein2genome:local similarity 267932 268942 1118 - . alignment_id 0 ; Query GL50803_9154-t26_1-p1 ; Align 268943 170 84 ; Align 268856 198 120 ; Align 268736 240 804 utg47_pilon exonerate:protein2genome:local gene 266241 267893 2249 - . gene_id 0 ; sequence GL50803_9155-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 266546 267893 . - . utg47_pilon exonerate:protein2genome:local exon 266546 267893 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 266544 266545 . - . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 266510 266545 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 266510 266511 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 266241 266509 . - . utg47_pilon exonerate:protein2genome:local exon 266241 266509 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 266241 267893 2249 - . alignment_id 0 ; Query GL50803_9155-t26_1-p1 ; Align 267894 1 1347 ; Align 266508 451 267 utg47_pilon exonerate:protein2genome:local gene 262230 263042 1049 - . gene_id 0 ; sequence GL50803_9157-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 262230 263042 . - . utg47_pilon exonerate:protein2genome:local exon 262230 263042 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 262230 263042 1049 - . alignment_id 0 ; Query GL50803_9157-t26_1-p1 ; Align 263043 1 381 ; Align 262659 128 429 utg64_pilon exonerate:protein2genome:local gene 329364 329600 333 - . gene_id 0 ; sequence GL50803_91611-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 329364 329600 . - . utg64_pilon exonerate:protein2genome:local exon 329364 329600 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 329364 329600 333 - . alignment_id 0 ; Query GL50803_91611-t26_1-p1 ; Align 329601 1 237 utg47_pilon exonerate:protein2genome:local gene 228629 229534 1380 + . gene_id 0 ; sequence GL50803_9162-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 228629 229534 . + . utg47_pilon exonerate:protein2genome:local exon 228629 229534 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 228629 229534 1380 + . alignment_id 0 ; Query GL50803_9162-t26_1-p1 ; Align 228629 1 906 utg64_pilon exonerate:protein2genome:local gene 392551 392877 480 + . gene_id 0 ; sequence GL50803_91642-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 392551 392877 . + . utg64_pilon exonerate:protein2genome:local exon 392551 392877 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 392551 392877 480 + . alignment_id 0 ; Query GL50803_91642-t26_1-p1 ; Align 392551 1 327 utg64_pilon exonerate:protein2genome:local gene 392115 396160 5816 - . gene_id 0 ; sequence GL50803_91643-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 392115 396160 . - . utg64_pilon exonerate:protein2genome:local exon 392115 396160 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 392115 396160 5816 - . alignment_id 0 ; Query GL50803_91643-t26_1-p1 ; Align 396161 1 2958 ; Align 393202 987 177 ; Align 393024 1046 909 utg47_pilon exonerate:protein2genome:local gene 1172883 1173188 434 - . gene_id 0 ; sequence GL50803_91704-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1172883 1173188 . - . utg47_pilon exonerate:protein2genome:local exon 1172883 1173188 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1172883 1173188 434 - . alignment_id 0 ; Query GL50803_91704-t26_1-p1 ; Align 1173189 2 306 utg47_pilon exonerate:protein2genome:local gene 1170268 1172323 1993 - . gene_id 0 ; sequence GL50803_91707-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1170268 1172323 . - . utg47_pilon exonerate:protein2genome:local exon 1170268 1172323 . - . insertions 18 ; deletions 9 ; frameshifts 4 utg47_pilon exonerate:protein2genome:local similarity 1170268 1172323 1993 - . alignment_id 0 ; Query GL50803_91707-t26_1-p1 ; Align 1172324 3 240 ; Align 1172084 84 27 ; Align 1172057 94 42 ; Align 1172015 111 138 ; Align 1171877 158 630 ; Align 1171235 368 21 ; Align 1171214 376 117 ; Align 1171097 416 162 ; Align 1170932 470 369 ; Align 1170562 593 102 ; Align 1170458 627 3 ; Align 1170455 629 99 ; Align 1170355 662 30 ; Align 1170322 672 54 utg47_pilon exonerate:protein2genome:local gene 1165466 1167601 3035 - . gene_id 0 ; sequence GL50803_91712-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1165466 1167601 . - . utg47_pilon exonerate:protein2genome:local exon 1165466 1167601 . - . insertions 15 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1165466 1167601 3035 - . alignment_id 0 ; Query GL50803_91712-t26_1-p1 ; Align 1167602 1 1590 ; Align 1165997 531 531 utg47_pilon exonerate:protein2genome:local gene 1165212 1165457 254 - . gene_id 0 ; sequence GL50803_91714-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1165212 1165457 . - . utg47_pilon exonerate:protein2genome:local exon 1165212 1165457 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1165212 1165457 254 - . alignment_id 0 ; Query GL50803_91714-t26_1-p1 ; Align 1165458 2 246 utg47_pilon exonerate:protein2genome:local gene 1163253 1163510 215 + . gene_id 0 ; sequence GL50803_91716-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1163253 1163510 . + . utg47_pilon exonerate:protein2genome:local exon 1163253 1163510 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1163253 1163510 215 + . alignment_id 0 ; Query GL50803_91716-t26_1-p1 ; Align 1163253 1 258 utg47_pilon exonerate:protein2genome:local gene 1158830 1159060 321 + . gene_id 0 ; sequence GL50803_91718-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1158830 1159060 . + . utg47_pilon exonerate:protein2genome:local exon 1158830 1159060 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1158830 1159060 321 + . alignment_id 0 ; Query GL50803_91718-t26_1-p1 ; Align 1158830 1 231 utg265_pilon exonerate:protein2genome:local gene 143229 144352 1849 + . gene_id 0 ; sequence GL50803_9173-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 143229 144352 . + . utg265_pilon exonerate:protein2genome:local exon 143229 144352 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 143229 144352 1849 + . alignment_id 0 ; Query GL50803_9173-t26_1-p1 ; Align 143229 1 327 ; Align 143556 111 6 ; Align 143564 113 789 utg265_pilon exonerate:protein2genome:local gene 142530 143186 999 + . gene_id 0 ; sequence GL50803_9174-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 142530 143186 . + . utg265_pilon exonerate:protein2genome:local exon 142530 143186 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 142530 143186 999 + . alignment_id 0 ; Query GL50803_9174-t26_1-p1 ; Align 142530 1 657 utg349_pilon exonerate:protein2genome:local gene 1421799 1422071 248 + . gene_id 0 ; sequence GL50803_91749-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1421799 1422071 . + . utg349_pilon exonerate:protein2genome:local exon 1421799 1422071 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1421799 1422071 248 + . alignment_id 0 ; Query GL50803_91749-t26_1-p1 ; Align 1421799 1 273 utg265_pilon exonerate:protein2genome:local gene 140922 142492 1917 + . gene_id 0 ; sequence GL50803_9175-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 140922 142492 . + . utg265_pilon exonerate:protein2genome:local exon 140922 142492 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 140922 142492 1917 + . alignment_id 0 ; Query GL50803_9175-t26_1-p1 ; Align 140922 1 588 ; Align 141512 198 981 utg349_pilon exonerate:protein2genome:local gene 1407054 1408868 2708 - . gene_id 0 ; sequence GL50803_91761-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1407054 1408868 . - . utg349_pilon exonerate:protein2genome:local exon 1407054 1408868 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1407054 1408868 2708 - . alignment_id 0 ; Query GL50803_91761-t26_1-p1 ; Align 1408869 1 1815 utg18_pilon exonerate:protein2genome:local gene 410126 410431 267 - . gene_id 0 ; sequence GL50803_91774-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 410126 410431 . - . utg18_pilon exonerate:protein2genome:local exon 410126 410431 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 410126 410431 267 - . alignment_id 0 ; Query GL50803_91774-t26_1-p1 ; Align 410432 4 306 utg265_pilon exonerate:protein2genome:local gene 136797 137456 457 + . gene_id 0 ; sequence GL50803_9180-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 136797 137456 . + . utg265_pilon exonerate:protein2genome:local exon 136797 137456 . + . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 136797 137456 457 + . alignment_id 0 ; Query GL50803_9180-t26_1-p1 ; Align 136797 1 639 ; Align 137439 214 18 utg265_pilon exonerate:protein2genome:local gene 135632 136789 1480 - . gene_id 0 ; sequence GL50803_9181-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 135632 136789 . - . utg265_pilon exonerate:protein2genome:local exon 135632 136789 . - . insertions 9 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 135632 136789 1480 - . alignment_id 0 ; Query GL50803_9181-t26_1-p1 ; Align 136790 1 1005 ; Align 135776 336 144 utg99_pilon exonerate:protein2genome:local gene 104375 104620 362 + . gene_id 0 ; sequence GL50803_91823-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 104375 104620 . + . utg99_pilon exonerate:protein2genome:local exon 104375 104620 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 104375 104620 362 + . alignment_id 0 ; Query GL50803_91823-t26_1-p1 ; Align 104375 1 246 utg265_pilon exonerate:protein2genome:local gene 129786 135490 7563 - . gene_id 0 ; sequence GL50803_9183-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 129786 135490 . - . utg265_pilon exonerate:protein2genome:local exon 129786 135490 . - . insertions 0 ; deletions 6 ; frameshifts 11 utg265_pilon exonerate:protein2genome:local similarity 129786 135490 7563 - . alignment_id 0 ; Query GL50803_9183-t26_1-p1 ; Align 135491 1 2265 ; Align 133226 757 438 ; Align 132786 904 171 ; Align 132614 961 1152 ; Align 131460 1346 72 ; Align 131387 1371 78 ; Align 131307 1398 210 ; Align 131095 1469 1095 ; Align 129999 1834 213 utg265_pilon exonerate:protein2genome:local gene 127420 129772 3359 + . gene_id 0 ; sequence GL50803_9184-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 127420 128369 . + . utg265_pilon exonerate:protein2genome:local exon 127420 128369 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local splice5 128370 128371 . + . intron_id 1 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 128370 128399 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 128398 128399 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 128400 129772 . + . utg265_pilon exonerate:protein2genome:local exon 128400 129772 . + . insertions 6 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 127420 129772 3359 + . alignment_id 0 ; Query GL50803_9184-t26_1-p1 ; Align 127420 1 573 ; Align 127994 193 375 ; Align 128402 319 12 ; Align 128414 325 681 ; Align 129098 552 312 ; Align 129413 656 360 utg99_pilon exonerate:protein2genome:local gene 101605 101757 166 + . gene_id 0 ; sequence GL50803_91844-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 101605 101757 . + . utg99_pilon exonerate:protein2genome:local exon 101605 101757 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 101605 101757 166 + . alignment_id 0 ; Query GL50803_91844-t26_1-p1 ; Align 101605 27 153 utg47_pilon exonerate:protein2genome:local gene 2060557 2060820 147 + . gene_id 0 ; sequence GL50803_9187-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 2060557 2060820 . + . utg47_pilon exonerate:protein2genome:local exon 2060557 2060820 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 2060557 2060820 147 + . alignment_id 0 ; Query GL50803_9187-t26_1-p1 ; Align 2060557 2 69 ; Align 2060629 25 192 utg47_pilon exonerate:protein2genome:local gene 1870622 1871269 382 - . gene_id 0 ; sequence GL50803_9189-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1870622 1871269 . - . utg47_pilon exonerate:protein2genome:local exon 1870622 1871269 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1870622 1871269 382 - . alignment_id 0 ; Query GL50803_9189-t26_1-p1 ; Align 1871270 1 66 ; Align 1871204 24 582 utg11_pilon exonerate:protein2genome:local gene 542455 543450 1553 + . gene_id 0 ; sequence GL50803_91911-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 542455 543450 . + . utg11_pilon exonerate:protein2genome:local exon 542455 543450 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 542455 543450 1553 + . alignment_id 0 ; Query GL50803_91911-t26_1-p1 ; Align 542455 1 996 utg11_pilon exonerate:protein2genome:local gene 531006 532655 2612 - . gene_id 0 ; sequence GL50803_91919-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 531006 532655 . - . utg11_pilon exonerate:protein2genome:local exon 531006 532655 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 531006 532655 2612 - . alignment_id 0 ; Query GL50803_91919-t26_1-p1 ; Align 532656 1 1650 utg11_pilon exonerate:protein2genome:local gene 513310 517125 5210 - . gene_id 0 ; sequence GL50803_91934-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 513310 517125 . - . utg11_pilon exonerate:protein2genome:local exon 513310 517125 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 513310 517125 5210 - . alignment_id 0 ; Query GL50803_91934-t26_1-p1 ; Align 517126 1 3816 utg265_pilon exonerate:protein2genome:local gene 1061261 1063726 3536 + . gene_id 0 ; sequence GL50803_9194-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1061261 1063726 . + . utg265_pilon exonerate:protein2genome:local exon 1061261 1063726 . + . insertions 3 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 1061261 1063726 3536 + . alignment_id 0 ; Query GL50803_9194-t26_1-p1 ; Align 1061261 1 1836 ; Align 1063097 616 357 ; Align 1063457 735 270 utg11_pilon exonerate:protein2genome:local gene 498738 498941 225 + . gene_id 0 ; sequence GL50803_91951-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 498738 498941 . + . utg11_pilon exonerate:protein2genome:local exon 498738 498941 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 498738 498941 225 + . alignment_id 0 ; Query GL50803_91951-t26_1-p1 ; Align 498738 3 204 utg265_pilon exonerate:protein2genome:local gene 1065773 1066663 1453 + . gene_id 0 ; sequence GL50803_9196-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1065773 1066663 . + . utg265_pilon exonerate:protein2genome:local exon 1065773 1066663 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 1065773 1066663 1453 + . alignment_id 0 ; Query GL50803_9196-t26_1-p1 ; Align 1065773 1 891 utg265_pilon exonerate:protein2genome:local gene 1066744 1069134 2639 + . gene_id 0 ; sequence GL50803_9198-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 1066744 1069134 . + . utg265_pilon exonerate:protein2genome:local exon 1066744 1069134 . + . insertions 0 ; deletions 7 utg265_pilon exonerate:protein2genome:local similarity 1066744 1069134 2639 + . alignment_id 0 ; Query GL50803_9198-t26_1-p1 ; Align 1066744 1 597 ; Align 1067341 202 588 ; Align 1067929 401 1026 ; Align 1068955 745 180 utg308_pilon exonerate:protein2genome:local gene 944569 947637 4444 - . gene_id 0 ; sequence GL50803_92031-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 944569 947637 . - . utg308_pilon exonerate:protein2genome:local exon 944569 947637 . - . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 944569 947637 4444 - . alignment_id 0 ; Query GL50803_92031-t26_1-p1 ; Align 947638 1 1044 ; Align 946594 350 21 ; Align 946573 358 2004 utg308_pilon exonerate:protein2genome:local gene 950531 950788 230 + . gene_id 0 ; sequence GL50803_92034-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 950531 950788 . + . utg308_pilon exonerate:protein2genome:local exon 950531 950788 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 950531 950788 230 + . alignment_id 0 ; Query GL50803_92034-t26_1-p1 ; Align 950531 3 258 utg308_pilon exonerate:protein2genome:local gene 953952 954290 294 + . gene_id 0 ; sequence GL50803_92037-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 953952 954290 . + . utg308_pilon exonerate:protein2genome:local exon 953952 954290 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 953952 954290 294 + . alignment_id 0 ; Query GL50803_92037-t26_1-p1 ; Align 953952 1 339 utg18_pilon exonerate:protein2genome:local gene 159724 159960 236 - . gene_id 0 ; sequence GL50803_92057-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 159724 159960 . - . utg18_pilon exonerate:protein2genome:local exon 159724 159960 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 159724 159960 236 - . alignment_id 0 ; Query GL50803_92057-t26_1-p1 ; Align 159961 1 237 utg47_pilon exonerate:protein2genome:local gene 1815917 1816258 270 - . gene_id 0 ; sequence GL50803_92094-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1815917 1816258 . - . utg47_pilon exonerate:protein2genome:local exon 1815917 1816258 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1815917 1816258 270 - . alignment_id 0 ; Query GL50803_92094-t26_1-p1 ; Align 1816259 1 342 utg47_pilon exonerate:protein2genome:local gene 1815530 1817275 1763 + . gene_id 0 ; sequence GL50803_92095-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1815530 1816774 . + . utg47_pilon exonerate:protein2genome:local exon 1815530 1816774 . + . insertions 0 ; deletions 6 utg47_pilon exonerate:protein2genome:local splice5 1816775 1816776 . + . intron_id 1 ; splice_site "CT" utg47_pilon exonerate:protein2genome:local intron 1816775 1816804 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1816803 1816804 . + . intron_id 0 ; splice_site "AT" utg47_pilon exonerate:protein2genome:local cds 1816805 1817275 . + . utg47_pilon exonerate:protein2genome:local exon 1816805 1817275 . + . insertions 0 ; deletions 5 utg47_pilon exonerate:protein2genome:local similarity 1815530 1817275 1763 + . alignment_id 0 ; Query GL50803_92095-t26_1-p1 ; Align 1815530 1 768 ; Align 1816298 258 117 ; Align 1816415 301 111 ; Align 1816526 339 249 ; Align 1816805 422 156 ; Align 1816961 477 180 ; Align 1817141 538 75 ; Align 1817216 564 60 utg265_pilon exonerate:protein2genome:local gene 410086 410743 737 + . gene_id 0 ; sequence GL50803_9210-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 410086 410743 . + . utg265_pilon exonerate:protein2genome:local exon 410086 410743 . + . insertions 3 ; deletions 0 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 410086 410743 737 + . alignment_id 0 ; Query GL50803_9210-t26_1-p1 ; Align 410086 5 78 ; Align 410165 31 510 ; Align 410678 201 66 utg47_pilon exonerate:protein2genome:local gene 1794146 1794343 173 - . gene_id 0 ; sequence GL50803_92123-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1794146 1794343 . - . utg47_pilon exonerate:protein2genome:local exon 1794146 1794343 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1794146 1794343 173 - . alignment_id 0 ; Query GL50803_92123-t26_1-p1 ; Align 1794344 5 198 utg265_pilon exonerate:protein2genome:local gene 407337 408263 1093 + . gene_id 0 ; sequence GL50803_9213-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 407337 408263 . + . utg265_pilon exonerate:protein2genome:local exon 407337 408263 . + . insertions 6 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 407337 408263 1093 + . alignment_id 0 ; Query GL50803_9213-t26_1-p1 ; Align 407337 1 291 ; Align 407631 98 303 ; Align 407937 199 111 ; Align 408048 237 216 utg99_pilon exonerate:protein2genome:local gene 425917 429684 4924 + . gene_id 0 ; sequence GL50803_92132-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 425917 429684 . + . utg99_pilon exonerate:protein2genome:local exon 425917 429684 . + . insertions 3 ; deletions 6 utg99_pilon exonerate:protein2genome:local similarity 425917 429684 4924 + . alignment_id 0 ; Query GL50803_92132-t26_1-p1 ; Align 425917 420 339 ; Align 426256 535 996 ; Align 427252 868 273 ; Align 427525 960 237 ; Align 427765 1039 366 ; Align 428131 1162 870 ; Align 429001 1453 684 utg99_pilon exonerate:protein2genome:local gene 429741 433239 4779 + . gene_id 0 ; sequence GL50803_92134-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 429741 433239 . + . utg99_pilon exonerate:protein2genome:local exon 429741 433239 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg99_pilon exonerate:protein2genome:local similarity 429741 433239 4779 + . alignment_id 0 ; Query GL50803_92134-t26_1-p1 ; Align 429741 1 84 ; Align 429826 29 3414 utg265_pilon exonerate:protein2genome:local gene 391241 391504 367 + . gene_id 0 ; sequence GL50803_9219-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 391241 391504 . + . utg265_pilon exonerate:protein2genome:local exon 391241 391504 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 391241 391504 367 + . alignment_id 0 ; Query GL50803_9219-t26_1-p1 ; Align 391241 1 264 utg731_pilon exonerate:protein2genome:local gene 339327 339488 157 + . gene_id 0 ; sequence GL50803_92221-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 339327 339488 . + . utg731_pilon exonerate:protein2genome:local exon 339327 339488 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 339327 339488 157 + . alignment_id 0 ; Query GL50803_92221-t26_1-p1 ; Align 339327 1 162 utg731_pilon exonerate:protein2genome:local gene 332204 332365 157 - . gene_id 0 ; sequence GL50803_92221-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 332204 332365 . - . utg731_pilon exonerate:protein2genome:local exon 332204 332365 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 332204 332365 157 - . alignment_id 0 ; Query GL50803_92221-t26_1-p1 ; Align 332366 1 162 utg349_pilon exonerate:protein2genome:local gene 617294 620115 4242 - . gene_id 0 ; sequence GL50803_92223-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 617294 620115 . - . utg349_pilon exonerate:protein2genome:local exon 617294 620115 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 617294 620115 4242 - . alignment_id 0 ; Query GL50803_92223-t26_1-p1 ; Align 620116 1 105 ; Align 620009 37 2715 utg349_pilon exonerate:protein2genome:local gene 596939 597292 438 - . gene_id 0 ; sequence GL50803_92245-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 596939 597292 . - . utg349_pilon exonerate:protein2genome:local exon 596939 597292 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 596939 597292 438 - . alignment_id 0 ; Query GL50803_92245-t26_1-p1 ; Align 597293 1 354 utg349_pilon exonerate:protein2genome:local gene 596385 600476 5722 + . gene_id 0 ; sequence GL50803_92246-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 596385 600476 . + . utg349_pilon exonerate:protein2genome:local exon 596385 600476 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 596385 600476 5722 + . alignment_id 0 ; Query GL50803_92246-t26_1-p1 ; Align 596385 1 4092 utg349_pilon exonerate:protein2genome:local gene 576249 576476 169 + . gene_id 0 ; sequence GL50803_92268-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 576249 576476 . + . utg349_pilon exonerate:protein2genome:local exon 576249 576476 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 576249 576476 169 + . alignment_id 0 ; Query GL50803_92268-t26_1-p1 ; Align 576249 2 228 utg47_pilon exonerate:protein2genome:local gene 708137 708361 209 - . gene_id 0 ; sequence GL50803_92306-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 708137 708361 . - . utg47_pilon exonerate:protein2genome:local exon 708137 708361 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 708137 708361 209 - . alignment_id 0 ; Query GL50803_92306-t26_1-p1 ; Align 708362 1 225 utg47_pilon exonerate:protein2genome:local gene 702539 702745 196 + . gene_id 0 ; sequence GL50803_92313-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 702539 702745 . + . utg47_pilon exonerate:protein2genome:local exon 702539 702745 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 702539 702745 196 + . alignment_id 0 ; Query GL50803_92313-t26_1-p1 ; Align 702539 1 207 utg47_pilon exonerate:protein2genome:local gene 683692 683874 171 + . gene_id 0 ; sequence GL50803_92333-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 683692 683874 . + . utg47_pilon exonerate:protein2genome:local exon 683692 683874 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 683692 683874 171 + . alignment_id 0 ; Query GL50803_92333-t26_1-p1 ; Align 683692 1 162 ; Align 683854 56 21 utg47_pilon exonerate:protein2genome:local gene 671318 671551 268 - . gene_id 0 ; sequence GL50803_92342-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 671318 671551 . - . utg47_pilon exonerate:protein2genome:local exon 671318 671551 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 671318 671551 268 - . alignment_id 0 ; Query GL50803_92342-t26_1-p1 ; Align 671552 2 234 utg265_pilon exonerate:protein2genome:local gene 929543 932287 3352 - . gene_id 0 ; sequence GL50803_9237-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 929543 932287 . - . utg265_pilon exonerate:protein2genome:local exon 929543 932287 . - . insertions 3 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 929543 932287 3352 - . alignment_id 0 ; Query GL50803_9237-t26_1-p1 ; Align 932288 1 489 ; Align 931799 165 2103 ; Align 929693 866 150 utg47_pilon exonerate:protein2genome:local gene 1743126 1743323 203 + . gene_id 0 ; sequence GL50803_92372-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1743126 1743323 . + . utg47_pilon exonerate:protein2genome:local exon 1743126 1743323 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1743126 1743323 203 + . alignment_id 0 ; Query GL50803_92372-t26_1-p1 ; Align 1743126 3 198 utg265_pilon exonerate:protein2genome:local gene 926403 929486 3639 - . gene_id 0 ; sequence GL50803_9238-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 926403 929486 . - . utg265_pilon exonerate:protein2genome:local exon 926403 929486 . - . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 926403 929486 3639 - . alignment_id 0 ; Query GL50803_9238-t26_1-p1 ; Align 929487 1 1434 ; Align 928053 481 30 ; Align 928023 492 1620 utg265_pilon exonerate:protein2genome:local gene 925592 926395 1194 + . gene_id 0 ; sequence GL50803_9239-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 925592 926395 . + . utg265_pilon exonerate:protein2genome:local exon 925592 926395 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 925592 926395 1194 + . alignment_id 0 ; Query GL50803_9239-t26_1-p1 ; Align 925592 1 804 utg11_pilon exonerate:protein2genome:local gene 1820579 1820737 176 + . gene_id 0 ; sequence GL50803_92401-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1820579 1820737 . + . utg11_pilon exonerate:protein2genome:local exon 1820579 1820737 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1820579 1820737 176 + . alignment_id 0 ; Query GL50803_92401-t26_1-p1 ; Align 1820579 1 159 utg11_pilon exonerate:protein2genome:local gene 1793509 1793667 176 - . gene_id 0 ; sequence GL50803_92401-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1793509 1793667 . - . utg11_pilon exonerate:protein2genome:local exon 1793509 1793667 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1793509 1793667 176 - . alignment_id 0 ; Query GL50803_92401-t26_1-p1 ; Align 1793668 1 159 utg47_pilon exonerate:protein2genome:local gene 295539 295922 427 - . gene_id 0 ; sequence GL50803_92425-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 295539 295922 . - . utg47_pilon exonerate:protein2genome:local exon 295539 295922 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 295539 295922 427 - . alignment_id 0 ; Query GL50803_92425-t26_1-p1 ; Align 295923 1 384 utg731_pilon exonerate:protein2genome:local gene 1605838 1606101 300 + . gene_id 0 ; sequence GL50803_92449-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1605838 1606101 . + . utg731_pilon exonerate:protein2genome:local exon 1605838 1606101 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1605838 1606101 300 + . alignment_id 0 ; Query GL50803_92449-t26_1-p1 ; Align 1605838 1 264 utg308_pilon exonerate:protein2genome:local gene 788268 791546 4855 + . gene_id 0 ; sequence GL50803_92495-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 788268 791546 . + . utg308_pilon exonerate:protein2genome:local exon 788268 791546 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 788268 791546 4855 + . alignment_id 0 ; Query GL50803_92495-t26_1-p1 ; Align 788268 1 3279 utg308_pilon exonerate:protein2genome:local gene 787038 787319 195 - . gene_id 0 ; sequence GL50803_92496-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 787038 787319 . - . utg308_pilon exonerate:protein2genome:local exon 787038 787319 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 787038 787319 195 - . alignment_id 0 ; Query GL50803_92496-t26_1-p1 ; Align 787320 12 282 utg308_pilon exonerate:protein2genome:local gene 769450 788217 2684 - . gene_id 0 ; sequence GL50803_92498-t26_1-p1 ; gene_orientation + utg308_pilon exonerate:protein2genome:local cds 786310 788217 . - . utg308_pilon exonerate:protein2genome:local exon 786310 788217 . - . insertions 0 ; deletions 5 utg308_pilon exonerate:protein2genome:local splice5 786308 786309 . - . intron_id 1 ; splice_site "GA" utg308_pilon exonerate:protein2genome:local intron 769480 786309 . - . intron_id 1 utg308_pilon exonerate:protein2genome:local splice3 769480 769481 . - . intron_id 0 ; splice_site "AG" utg308_pilon exonerate:protein2genome:local cds 769450 769479 . - . utg308_pilon exonerate:protein2genome:local exon 769450 769479 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 769450 788217 2684 - . alignment_id 0 ; Query GL50803_92498-t26_1-p1 ; Align 788218 1 1605 ; Align 786613 540 213 ; Align 786400 612 90 ; Align 769480 642 30 utg308_pilon exonerate:protein2genome:local gene 766951 770451 5267 + . gene_id 0 ; sequence GL50803_92518-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 766951 770451 . + . utg308_pilon exonerate:protein2genome:local exon 766951 770451 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 766951 770451 5267 + . alignment_id 0 ; Query GL50803_92518-t26_1-p1 ; Align 766951 1 3501 utg11_pilon exonerate:protein2genome:local gene 1594152 1594733 741 - . gene_id 0 ; sequence GL50803_9259-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1594152 1594733 . - . utg11_pilon exonerate:protein2genome:local exon 1594152 1594733 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1594152 1594733 741 - . alignment_id 0 ; Query GL50803_9259-t26_1-p1 ; Align 1594734 1 582 utg265_pilon exonerate:protein2genome:local gene 392857 401768 11425 + . gene_id 0 ; sequence GL50803_92602-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 392857 401768 . + . utg265_pilon exonerate:protein2genome:local exon 392857 401768 . + . insertions 0 ; deletions 9 ; frameshifts 8 utg265_pilon exonerate:protein2genome:local similarity 392857 401768 11425 + . alignment_id 0 ; Query GL50803_92602-t26_1-p1 ; Align 392857 112 99 ; Align 392957 145 4005 ; Align 396962 1481 3 ; Align 396967 1482 108 ; Align 397075 1519 153 ; Align 397229 1570 936 ; Align 398167 1883 681 ; Align 398848 2111 123 ; Align 398971 2153 165 ; Align 399136 2210 1050 ; Align 400188 2561 300 ; Align 400488 2662 1281 utg265_pilon exonerate:protein2genome:local gene 416240 416512 364 + . gene_id 0 ; sequence GL50803_92617-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 416240 416512 . + . utg265_pilon exonerate:protein2genome:local exon 416240 416512 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 416240 416512 364 + . alignment_id 0 ; Query GL50803_92617-t26_1-p1 ; Align 416240 1 273 utg265_pilon exonerate:protein2genome:local gene 416209 416943 1163 - . gene_id 0 ; sequence GL50803_92618-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 416209 416943 . - . utg265_pilon exonerate:protein2genome:local exon 416209 416943 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 416209 416943 1163 - . alignment_id 0 ; Query GL50803_92618-t26_1-p1 ; Align 416944 1 735 utg11_pilon exonerate:protein2genome:local gene 1590065 1593496 4653 - . gene_id 0 ; sequence GL50803_9262-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1590065 1593496 . - . utg11_pilon exonerate:protein2genome:local exon 1590065 1593496 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1590065 1593496 4653 - . alignment_id 0 ; Query GL50803_9262-t26_1-p1 ; Align 1593497 1 825 ; Align 1592672 278 2607 utg265_pilon exonerate:protein2genome:local gene 421003 421230 238 - . gene_id 0 ; sequence GL50803_92625-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 421003 421230 . - . utg265_pilon exonerate:protein2genome:local exon 421003 421230 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 421003 421230 238 - . alignment_id 0 ; Query GL50803_92625-t26_1-p1 ; Align 421231 1 228 utg265_pilon exonerate:protein2genome:local gene 435796 437598 2610 - . gene_id 0 ; sequence GL50803_92645-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 435796 437598 . - . utg265_pilon exonerate:protein2genome:local exon 435796 437598 . - . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 435796 437598 2610 - . alignment_id 0 ; Query GL50803_92645-t26_1-p1 ; Align 437599 1 57 ; Align 437539 20 1743 utg1966_pilon exonerate:protein2genome:local gene 156339 156986 738 + . gene_id 0 ; sequence GL50803_92651-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 156339 156986 . + . utg1966_pilon exonerate:protein2genome:local exon 156339 156986 . + . insertions 0 ; deletions 4 utg1966_pilon exonerate:protein2genome:local similarity 156339 156986 738 + . alignment_id 0 ; Query GL50803_92651-t26_1-p1 ; Align 156339 57 135 ; Align 156474 106 513 utg11_pilon exonerate:protein2genome:local gene 1580777 1582696 2697 + . gene_id 0 ; sequence GL50803_9266-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1580777 1582696 . + . utg11_pilon exonerate:protein2genome:local exon 1580777 1582696 . + . insertions 9 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1580777 1582696 2697 + . alignment_id 0 ; Query GL50803_9266-t26_1-p1 ; Align 1580777 1 786 ; Align 1581563 264 774 ; Align 1582346 522 351 utg265_pilon exonerate:protein2genome:local gene 333491 333949 635 + . gene_id 0 ; sequence GL50803_92663-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 333491 333949 . + . utg265_pilon exonerate:protein2genome:local exon 333491 333949 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 333491 333949 635 + . alignment_id 0 ; Query GL50803_92663-t26_1-p1 ; Align 333491 25 459 utg1966_pilon exonerate:protein2genome:local gene 77199 77978 856 - . gene_id 0 ; sequence GL50803_92664-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 77199 77978 . - . utg1966_pilon exonerate:protein2genome:local exon 77199 77978 . - . insertions 3 ; deletions 0 utg1966_pilon exonerate:protein2genome:local similarity 77199 77978 856 - . alignment_id 0 ; Query GL50803_92664-t26_1-p1 ; Align 77979 258 522 ; Align 77454 432 255 utg265_pilon exonerate:protein2genome:local gene 346532 348952 2897 + . gene_id 0 ; sequence GL50803_92673-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 346532 348952 . + . utg265_pilon exonerate:protein2genome:local exon 346532 348952 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 346532 348952 2897 + . alignment_id 0 ; Query GL50803_92673-t26_1-p1 ; Align 346532 1 2421 utg11_pilon exonerate:protein2genome:local gene 1578668 1580494 2979 - . gene_id 0 ; sequence GL50803_9270-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1578668 1580494 . - . utg11_pilon exonerate:protein2genome:local exon 1578668 1580494 . - . insertions 3 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1578668 1580494 2979 - . alignment_id 0 ; Query GL50803_9270-t26_1-p1 ; Align 1580495 1 1089 ; Align 1579406 365 69 ; Align 1579334 388 360 ; Align 1578974 509 306 utg11_pilon exonerate:protein2genome:local gene 1575911 1577953 2427 - . gene_id 0 ; sequence GL50803_9272-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1575911 1577953 . - . utg11_pilon exonerate:protein2genome:local exon 1575911 1577953 . - . insertions 3 ; deletions 5 utg11_pilon exonerate:protein2genome:local similarity 1575911 1577953 2427 - . alignment_id 0 ; Query GL50803_9272-t26_1-p1 ; Align 1577954 91 78 ; Align 1577873 117 507 ; Align 1577366 290 39 ; Align 1577327 304 1416 utg47_pilon exonerate:protein2genome:local gene 1527818 1529439 2446 - . gene_id 0 ; sequence GL50803_92729-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1527818 1529439 . - . utg47_pilon exonerate:protein2genome:local exon 1527818 1529439 . - . insertions 0 ; deletions 4 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1527818 1529439 2446 - . alignment_id 0 ; Query GL50803_92729-t26_1-p1 ; Align 1529440 1 165 ; Align 1529273 57 639 ; Align 1528634 273 816 utg47_pilon exonerate:protein2genome:local gene 1536547 1536980 234 + . gene_id 0 ; sequence GL50803_92738-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1536547 1536980 . + . utg47_pilon exonerate:protein2genome:local exon 1536547 1536980 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1536547 1536980 234 + . alignment_id 0 ; Query GL50803_92738-t26_1-p1 ; Align 1536547 9 387 ; Align 1536936 139 45 utg47_pilon exonerate:protein2genome:local gene 1534726 1537481 3085 - . gene_id 0 ; sequence GL50803_92739-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1534726 1537481 . - . utg47_pilon exonerate:protein2genome:local exon 1534726 1537481 . - . insertions 0 ; deletions 12 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1534726 1537481 3085 - . alignment_id 0 ; Query GL50803_92739-t26_1-p1 ; Align 1537482 1 78 ; Align 1537404 29 468 ; Align 1536934 186 795 ; Align 1536139 454 285 ; Align 1535854 550 36 ; Align 1535818 563 801 ; Align 1535017 834 291 utg11_pilon exonerate:protein2genome:local gene 1574018 1575118 1405 - . gene_id 0 ; sequence GL50803_9274-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1574018 1575118 . - . utg11_pilon exonerate:protein2genome:local exon 1574018 1575118 . - . insertions 0 ; deletions 7 utg11_pilon exonerate:protein2genome:local similarity 1574018 1575118 1405 - . alignment_id 0 ; Query GL50803_9274-t26_1-p1 ; Align 1575119 1 426 ; Align 1574693 144 30 ; Align 1574663 159 63 ; Align 1574600 181 582 utg47_pilon exonerate:protein2genome:local gene 1537628 1538959 2299 + . gene_id 0 ; sequence GL50803_92741-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1537628 1538959 . + . utg47_pilon exonerate:protein2genome:local exon 1537628 1538959 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1537628 1538959 2299 + . alignment_id 0 ; Query GL50803_92741-t26_1-p1 ; Align 1537628 1 1332 utg47_pilon exonerate:protein2genome:local gene 1309826 1310143 338 + . gene_id 0 ; sequence GL50803_92758-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1309826 1310143 . + . utg47_pilon exonerate:protein2genome:local exon 1309826 1310143 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1309826 1310143 338 + . alignment_id 0 ; Query GL50803_92758-t26_1-p1 ; Align 1309826 1 69 ; Align 1309901 24 243 utg11_pilon exonerate:protein2genome:local gene 1571287 1572696 2321 + . gene_id 0 ; sequence GL50803_9276-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1571287 1572696 . + . utg11_pilon exonerate:protein2genome:local exon 1571287 1572696 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1571287 1572696 2321 + . alignment_id 0 ; Query GL50803_9276-t26_1-p1 ; Align 1571287 1 1410 utg47_pilon exonerate:protein2genome:local gene 1307469 1308929 2134 - . gene_id 0 ; sequence GL50803_92760-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1307469 1308929 . - . utg47_pilon exonerate:protein2genome:local exon 1307469 1308929 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1307469 1308929 2134 - . alignment_id 0 ; Query GL50803_92760-t26_1-p1 ; Align 1308930 1 1461 utg47_pilon exonerate:protein2genome:local gene 1344097 1344360 361 + . gene_id 0 ; sequence GL50803_92775-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1344097 1344360 . + . utg47_pilon exonerate:protein2genome:local exon 1344097 1344360 . + . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1344097 1344360 361 + . alignment_id 0 ; Query GL50803_92775-t26_1-p1 ; Align 1344097 1 195 ; Align 1344295 66 66 utg47_pilon exonerate:protein2genome:local gene 1642529 1642711 253 - . gene_id 0 ; sequence GL50803_9280-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1642529 1642711 . - . utg47_pilon exonerate:protein2genome:local exon 1642529 1642711 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1642529 1642711 253 - . alignment_id 0 ; Query GL50803_9280-t26_1-p1 ; Align 1642712 1 183 utg47_pilon exonerate:protein2genome:local gene 514621 515220 502 + . gene_id 0 ; sequence GL50803_92823-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 514621 515220 . + . utg47_pilon exonerate:protein2genome:local exon 514621 515220 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 514621 515220 502 + . alignment_id 0 ; Query GL50803_92823-t26_1-p1 ; Align 514621 1 600 utg47_pilon exonerate:protein2genome:local gene 1643260 1650474 9080 - . gene_id 0 ; sequence GL50803_9283-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1643260 1650474 . - . utg47_pilon exonerate:protein2genome:local exon 1643260 1650474 . - . insertions 12 ; deletions 12 utg47_pilon exonerate:protein2genome:local similarity 1643260 1650474 9080 - . alignment_id 0 ; Query GL50803_9283-t26_1-p1 ; Align 1650475 1 2586 ; Align 1647889 864 774 ; Align 1647115 1127 2118 ; Align 1644985 1833 489 ; Align 1644496 2000 156 ; Align 1644340 2053 435 ; Align 1643905 2199 645 utg212_pilon exonerate:protein2genome:local gene 14087 115880 591 + . gene_id 0 ; sequence GL50803_92835-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14087 14426 . + . utg212_pilon exonerate:protein2genome:local exon 14087 14426 . + . insertions 0 ; deletions 2 utg212_pilon exonerate:protein2genome:local splice5 14427 14428 . + . intron_id 1 ; splice_site "AC" utg212_pilon exonerate:protein2genome:local intron 14427 115722 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115721 115722 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115723 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115723 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14087 115880 591 + . alignment_id 0 ; Query GL50803_92835-t26_1-p1 ; Align 14087 1 21 ; Align 14108 9 18 ; Align 14126 16 300 ; Align 115725 117 156 utg265_pilon exonerate:protein2genome:local gene 838016 838264 235 - . gene_id 0 ; sequence GL50803_92869-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 838016 838264 . - . utg265_pilon exonerate:protein2genome:local exon 838016 838264 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 838016 838264 235 - . alignment_id 0 ; Query GL50803_92869-t26_1-p1 ; Align 838265 3 249 utg47_pilon exonerate:protein2genome:local gene 1652420 1653468 1623 - . gene_id 0 ; sequence GL50803_9287-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1652420 1653468 . - . utg47_pilon exonerate:protein2genome:local exon 1652420 1653468 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1652420 1653468 1623 - . alignment_id 0 ; Query GL50803_9287-t26_1-p1 ; Align 1653469 1 252 ; Align 1653215 85 795 utg265_pilon exonerate:protein2genome:local gene 822499 822726 245 + . gene_id 0 ; sequence GL50803_92888-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 822499 822726 . + . utg265_pilon exonerate:protein2genome:local exon 822499 822726 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 822499 822726 245 + . alignment_id 0 ; Query GL50803_92888-t26_1-p1 ; Align 822499 1 228 utg47_pilon exonerate:protein2genome:local gene 1653733 1655616 2951 - . gene_id 0 ; sequence GL50803_9289-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1653733 1655616 . - . utg47_pilon exonerate:protein2genome:local exon 1653733 1655616 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1653733 1655616 2951 - . alignment_id 0 ; Query GL50803_9289-t26_1-p1 ; Align 1655617 1 1074 ; Align 1654540 359 807 utg47_pilon exonerate:protein2genome:local gene 64856 65680 1096 + . gene_id 0 ; sequence GL50803_92892-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 64856 65680 . + . utg47_pilon exonerate:protein2genome:local exon 64856 65680 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 64856 65680 1096 + . alignment_id 0 ; Query GL50803_92892-t26_1-p1 ; Align 64856 1 825 utg265_pilon exonerate:protein2genome:local gene 792116 792367 254 + . gene_id 0 ; sequence GL50803_92897-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 792116 792367 . + . utg265_pilon exonerate:protein2genome:local exon 792116 792367 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 792116 792367 254 + . alignment_id 0 ; Query GL50803_92897-t26_1-p1 ; Align 792116 1 252 utg265_pilon exonerate:protein2genome:local gene 881908 882135 231 + . gene_id 0 ; sequence GL50803_92900-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 881908 882135 . + . utg265_pilon exonerate:protein2genome:local exon 881908 882135 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 881908 882135 231 + . alignment_id 0 ; Query GL50803_92900-t26_1-p1 ; Align 881908 1 228 utg731_pilon exonerate:protein2genome:local gene 322593 323054 298 + . gene_id 0 ; sequence GL50803_92919-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 322593 323054 . + . utg731_pilon exonerate:protein2genome:local exon 322593 323054 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 322593 323054 298 + . alignment_id 0 ; Query GL50803_92919-t26_1-p1 ; Align 322593 1 462 utg47_pilon exonerate:protein2genome:local gene 1660892 1663318 3548 + . gene_id 0 ; sequence GL50803_9293-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1660892 1663318 . + . utg47_pilon exonerate:protein2genome:local exon 1660892 1663318 . + . insertions 3 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1660892 1663318 3548 + . alignment_id 0 ; Query GL50803_9293-t26_1-p1 ; Align 1660892 1 639 ; Align 1661531 215 444 ; Align 1661975 364 198 ; Align 1662176 430 573 ; Align 1662749 622 570 utg47_pilon exonerate:protein2genome:local gene 1663338 1664324 1573 - . gene_id 0 ; sequence GL50803_9294-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1663338 1664324 . - . utg47_pilon exonerate:protein2genome:local exon 1663338 1664324 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1663338 1664324 1573 - . alignment_id 0 ; Query GL50803_9294-t26_1-p1 ; Align 1664325 1 987 utg731_pilon exonerate:protein2genome:local gene 316837 316980 155 + . gene_id 0 ; sequence GL50803_92941-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 316837 316980 . + . utg731_pilon exonerate:protein2genome:local exon 316837 316980 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 316837 316980 155 + . alignment_id 0 ; Query GL50803_92941-t26_1-p1 ; Align 316837 19 144 utg18_pilon exonerate:protein2genome:local gene 405249 405497 372 - . gene_id 0 ; sequence GL50803_92957-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 405249 405497 . - . utg18_pilon exonerate:protein2genome:local exon 405249 405497 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 405249 405497 372 - . alignment_id 0 ; Query GL50803_92957-t26_1-p1 ; Align 405498 1 249 utg47_pilon exonerate:protein2genome:local gene 1664906 1665295 470 - . gene_id 0 ; sequence GL50803_9296-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1664906 1665295 . - . utg47_pilon exonerate:protein2genome:local exon 1664906 1665295 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1664906 1665295 470 - . alignment_id 0 ; Query GL50803_9296-t26_1-p1 ; Align 1665296 1 390 utg11_pilon exonerate:protein2genome:local gene 648712 649113 543 - . gene_id 0 ; sequence GL50803_92977-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 648712 649113 . - . utg11_pilon exonerate:protein2genome:local exon 648712 649113 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 648712 649113 543 - . alignment_id 0 ; Query GL50803_92977-t26_1-p1 ; Align 649114 11 402 utg64_pilon exonerate:protein2genome:local gene 356633 357034 543 - . gene_id 0 ; sequence GL50803_92977-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 356633 357034 . - . utg64_pilon exonerate:protein2genome:local exon 356633 357034 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 356633 357034 543 - . alignment_id 0 ; Query GL50803_92977-t26_1-p1 ; Align 357035 11 402 utg212_pilon exonerate:protein2genome:local gene 405776 406177 543 + . gene_id 0 ; sequence GL50803_92977-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 405776 406177 . + . utg212_pilon exonerate:protein2genome:local exon 405776 406177 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 405776 406177 543 + . alignment_id 0 ; Query GL50803_92977-t26_1-p1 ; Align 405776 11 402 utg308_pilon exonerate:protein2genome:local gene 826234 826635 543 + . gene_id 0 ; sequence GL50803_92977-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 826234 826635 . + . utg308_pilon exonerate:protein2genome:local exon 826234 826635 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 826234 826635 543 + . alignment_id 0 ; Query GL50803_92977-t26_1-p1 ; Align 826234 11 402 utg349_pilon exonerate:protein2genome:local gene 1438897 1439298 543 - . gene_id 0 ; sequence GL50803_92977-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1438897 1439298 . - . utg349_pilon exonerate:protein2genome:local exon 1438897 1439298 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1438897 1439298 543 - . alignment_id 0 ; Query GL50803_92977-t26_1-p1 ; Align 1439299 11 402 utg731_pilon exonerate:protein2genome:local gene 69083 69484 543 + . gene_id 0 ; sequence GL50803_92977-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 69083 69484 . + . utg731_pilon exonerate:protein2genome:local exon 69083 69484 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 69083 69484 543 + . alignment_id 0 ; Query GL50803_92977-t26_1-p1 ; Align 69083 11 402 utg265_pilon exonerate:protein2genome:local gene 664009 664725 1097 + . gene_id 0 ; sequence GL50803_92983-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 664009 664725 . + . utg265_pilon exonerate:protein2genome:local exon 664009 664725 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 664009 664725 1097 + . alignment_id 0 ; Query GL50803_92983-t26_1-p1 ; Align 664009 23 717 utg47_pilon exonerate:protein2genome:local gene 869160 869327 192 - . gene_id 0 ; sequence GL50803_92985-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 869160 869327 . - . utg47_pilon exonerate:protein2genome:local exon 869160 869327 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 869160 869327 192 - . alignment_id 0 ; Query GL50803_92985-t26_1-p1 ; Align 869328 22 168 utg18_pilon exonerate:protein2genome:local gene 304803 305063 195 - . gene_id 0 ; sequence GL50803_92990-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 304803 305063 . - . utg18_pilon exonerate:protein2genome:local exon 304803 305063 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 304803 305063 195 - . alignment_id 0 ; Query GL50803_92990-t26_1-p1 ; Align 305064 1 261 utg18_pilon exonerate:protein2genome:local gene 282756 290042 10315 - . gene_id 0 ; sequence GL50803_93002-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 282756 290042 . - . utg18_pilon exonerate:protein2genome:local exon 282756 290042 . - . insertions 3 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 282756 290042 10315 - . alignment_id 0 ; Query GL50803_93002-t26_1-p1 ; Align 290043 1 2355 ; Align 287688 787 1164 ; Align 286521 1175 3765 utg18_pilon exonerate:protein2genome:local gene 267272 270433 4224 + . gene_id 0 ; sequence GL50803_93011-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 267272 268717 . + . utg18_pilon exonerate:protein2genome:local exon 267272 268717 . + . insertions 0 ; deletions 4 utg18_pilon exonerate:protein2genome:local splice5 268718 268719 . + . intron_id 1 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 268718 268762 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 268761 268762 . + . intron_id 0 ; splice_site "CG" utg18_pilon exonerate:protein2genome:local cds 268763 270433 . + . utg18_pilon exonerate:protein2genome:local exon 268763 270433 . + . insertions 3 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 267272 270433 4224 + . alignment_id 0 ; Query GL50803_93011-t26_1-p1 ; Align 267272 1 540 ; Align 267812 185 906 ; Align 268763 487 1026 ; Align 269792 829 642 utg265_pilon exonerate:protein2genome:local gene 870359 871222 553 + . gene_id 0 ; sequence GL50803_93024-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 870359 871222 . + . utg265_pilon exonerate:protein2genome:local exon 870359 871222 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 870359 871222 553 + . alignment_id 0 ; Query GL50803_93024-t26_1-p1 ; Align 870359 9 864 utg349_pilon exonerate:protein2genome:local gene 33450 33683 180 - . gene_id 0 ; sequence GL50803_93049-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 33450 33683 . - . utg349_pilon exonerate:protein2genome:local exon 33450 33683 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 33450 33683 180 - . alignment_id 0 ; Query GL50803_93049-t26_1-p1 ; Align 33684 7 234 utg731_pilon exonerate:protein2genome:local gene 170518 171282 1142 + . gene_id 0 ; sequence GL50803_9305-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 170518 171282 . + . utg731_pilon exonerate:protein2genome:local exon 170518 171282 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 170518 171282 1142 + . alignment_id 0 ; Query GL50803_9305-t26_1-p1 ; Align 170518 1 765 utg731_pilon exonerate:protein2genome:local gene 167886 170318 2940 - . gene_id 0 ; sequence GL50803_9307-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 167886 170318 . - . utg731_pilon exonerate:protein2genome:local exon 167886 170318 . - . insertions 0 ; deletions 5 utg731_pilon exonerate:protein2genome:local similarity 167886 170318 2940 - . alignment_id 0 ; Query GL50803_9307-t26_1-p1 ; Align 170319 1 801 ; Align 169518 272 102 ; Align 169416 307 1530 utg47_pilon exonerate:protein2genome:local gene 1150010 1150243 170 - . gene_id 0 ; sequence GL50803_93086-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1150010 1150243 . - . utg47_pilon exonerate:protein2genome:local exon 1150010 1150243 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1150010 1150243 170 - . alignment_id 0 ; Query GL50803_93086-t26_1-p1 ; Align 1150244 1 234 utg47_pilon exonerate:protein2genome:local gene 1121133 1123217 2961 + . gene_id 0 ; sequence GL50803_93103-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1121133 1123217 . + . utg47_pilon exonerate:protein2genome:local exon 1121133 1123217 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1121133 1123217 2961 + . alignment_id 0 ; Query GL50803_93103-t26_1-p1 ; Align 1121133 1 1140 ; Align 1122273 382 945 utg47_pilon exonerate:protein2genome:local gene 1119381 1119602 284 + . gene_id 0 ; sequence GL50803_93106-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1119381 1119602 . + . utg47_pilon exonerate:protein2genome:local exon 1119381 1119602 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1119381 1119602 284 + . alignment_id 0 ; Query GL50803_93106-t26_1-p1 ; Align 1119381 1 222 utg47_pilon exonerate:protein2genome:local gene 1113305 1113667 513 + . gene_id 0 ; sequence GL50803_93115-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1113305 1113667 . + . utg47_pilon exonerate:protein2genome:local exon 1113305 1113667 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1113305 1113667 513 + . alignment_id 0 ; Query GL50803_93115-t26_1-p1 ; Align 1113305 1 363 utg47_pilon exonerate:protein2genome:local gene 1100578 1100997 297 + . gene_id 0 ; sequence GL50803_93127-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1100578 1100997 . + . utg47_pilon exonerate:protein2genome:local exon 1100578 1100997 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1100578 1100997 297 + . alignment_id 0 ; Query GL50803_93127-t26_1-p1 ; Align 1100578 2 420 utg47_pilon exonerate:protein2genome:local gene 1083747 1084085 266 - . gene_id 0 ; sequence GL50803_93150-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1083747 1084085 . - . utg47_pilon exonerate:protein2genome:local exon 1083747 1084085 . - . insertions 0 ; deletions 3 utg47_pilon exonerate:protein2genome:local similarity 1083747 1084085 266 - . alignment_id 0 ; Query GL50803_93150-t26_1-p1 ; Align 1084086 1 270 ; Align 1083816 94 69 utg212_pilon exonerate:protein2genome:local gene 40853 41047 258 - . gene_id 0 ; sequence GL50803_93216-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 40853 41047 . - . utg212_pilon exonerate:protein2genome:local exon 40853 41047 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 40853 41047 258 - . alignment_id 0 ; Query GL50803_93216-t26_1-p1 ; Align 41048 3 195 utg349_pilon exonerate:protein2genome:local gene 1218833 1529163 807 - . gene_id 0 ; sequence GL50803_93221-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1528933 1529163 . - . utg349_pilon exonerate:protein2genome:local exon 1528933 1529163 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1528931 1528932 . - . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1514655 1528932 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1514655 1514656 . - . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1514624 1514654 . - . utg349_pilon exonerate:protein2genome:local exon 1514624 1514654 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1514622 1514623 . - . intron_id 2 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 1383357 1514623 . - . intron_id 2 utg349_pilon exonerate:protein2genome:local splice3 1383357 1383358 . - . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local cds 1383145 1383356 . - . utg349_pilon exonerate:protein2genome:local exon 1383145 1383356 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1383143 1383144 . - . intron_id 3 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local intron 1317501 1383144 . - . intron_id 3 utg349_pilon exonerate:protein2genome:local splice3 1317501 1317502 . - . intron_id 2 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1317276 1317500 . - . utg349_pilon exonerate:protein2genome:local exon 1317276 1317500 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1317274 1317275 . - . intron_id 4 ; splice_site "CT" utg349_pilon exonerate:protein2genome:local intron 1219906 1317275 . - . intron_id 4 utg349_pilon exonerate:protein2genome:local splice3 1219906 1219907 . - . intron_id 3 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1219425 1219905 . - . utg349_pilon exonerate:protein2genome:local exon 1219425 1219905 . - . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1219423 1219424 . - . intron_id 5 ; splice_site "CC" utg349_pilon exonerate:protein2genome:local intron 1218964 1219424 . - . intron_id 5 utg349_pilon exonerate:protein2genome:local splice3 1218964 1218965 . - . intron_id 4 ; splice_site "TG" utg349_pilon exonerate:protein2genome:local cds 1218833 1218963 . - . utg349_pilon exonerate:protein2genome:local exon 1218833 1218963 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1218833 1529163 807 - . alignment_id 0 ; Query GL50803_93221-t26_1-p1 ; Align 1529164 3 231 ; Align 1514655 80 30 ; Align 1383355 91 69 ; Align 1383283 114 138 ; Align 1317501 160 225 ; Align 1219906 235 210 ; Align 1219693 305 267 ; Align 1218962 395 129 utg349_pilon exonerate:protein2genome:local gene 187772 189012 805 - . gene_id 0 ; sequence GL50803_93253-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 187772 189012 . - . utg349_pilon exonerate:protein2genome:local exon 187772 189012 . - . insertions 18 ; deletions 1 ; frameshifts 2 utg349_pilon exonerate:protein2genome:local similarity 187772 189012 805 - . alignment_id 0 ; Query GL50803_93253-t26_1-p1 ; Align 189013 1 729 ; Align 188281 244 192 ; Align 188074 308 213 ; Align 187859 380 87 utg349_pilon exonerate:protein2genome:local gene 201010 201120 185 - . gene_id 0 ; sequence GL50803_93261-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 201010 201120 . - . utg349_pilon exonerate:protein2genome:local exon 201010 201120 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 201010 201120 185 - . alignment_id 0 ; Query GL50803_93261-t26_1-p1 ; Align 201121 1 111 utg349_pilon exonerate:protein2genome:local gene 205099 205329 252 + . gene_id 0 ; sequence GL50803_93267-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 205099 205329 . + . utg349_pilon exonerate:protein2genome:local exon 205099 205329 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 205099 205329 252 + . alignment_id 0 ; Query GL50803_93267-t26_1-p1 ; Align 205099 2 231 utg265_pilon exonerate:protein2genome:local gene 716647 884922 1448 - . gene_id 0 ; sequence GL50803_9327-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 883973 884922 . - . utg265_pilon exonerate:protein2genome:local exon 883973 884922 . - . insertions 18 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 883971 883972 . - . intron_id 1 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 871674 883972 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 871674 871675 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 871084 871673 . - . utg265_pilon exonerate:protein2genome:local exon 871084 871673 . - . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local splice5 871082 871083 . - . intron_id 2 ; splice_site "CT" utg265_pilon exonerate:protein2genome:local intron 870289 871083 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 870289 870290 . - . intron_id 1 ; splice_site "CG" utg265_pilon exonerate:protein2genome:local cds 870211 870288 . - . utg265_pilon exonerate:protein2genome:local exon 870211 870288 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 870209 870210 . - . intron_id 3 ; splice_site "CA" utg265_pilon exonerate:protein2genome:local intron 870088 870210 . - . intron_id 3 utg265_pilon exonerate:protein2genome:local splice3 870088 870089 . - . intron_id 2 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 869944 870087 . - . utg265_pilon exonerate:protein2genome:local exon 869944 870087 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 869942 869943 . - . intron_id 4 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 717006 869943 . - . intron_id 4 utg265_pilon exonerate:protein2genome:local splice3 717006 717007 . - . intron_id 3 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 716647 717005 . - . utg265_pilon exonerate:protein2genome:local exon 716647 717005 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 716647 884922 1448 - . alignment_id 0 ; Query GL50803_9327-t26_1-p1 ; Align 884923 15 396 ; Align 884512 147 126 ; Align 884383 189 408 ; Align 871673 326 162 ; Align 871511 384 426 ; Align 870287 527 75 ; Align 870086 553 141 ; Align 717004 601 21 ; Align 716983 609 336 utg349_pilon exonerate:protein2genome:local gene 207913 216406 11133 + . gene_id 0 ; sequence GL50803_93275-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 207913 216406 . + . utg349_pilon exonerate:protein2genome:local exon 207913 216406 . + . insertions 9 ; deletions 3 ; frameshifts 4 utg349_pilon exonerate:protein2genome:local similarity 207913 216406 11133 + . alignment_id 0 ; Query GL50803_93275-t26_1-p1 ; Align 207913 1 783 ; Align 208699 262 36 ; Align 208741 274 168 ; Align 208909 331 1155 ; Align 210065 716 36 ; Align 210101 729 942 ; Align 211045 1044 4431 ; Align 215477 2521 930 utg349_pilon exonerate:protein2genome:local gene 216445 219609 4616 + . gene_id 0 ; sequence GL50803_93278-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 216445 219609 . + . utg349_pilon exonerate:protein2genome:local exon 216445 219609 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 216445 219609 4616 + . alignment_id 0 ; Query GL50803_93278-t26_1-p1 ; Align 216445 1 3165 utg349_pilon exonerate:protein2genome:local gene 224985 225218 239 - . gene_id 0 ; sequence GL50803_93285-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 224985 225218 . - . utg349_pilon exonerate:protein2genome:local exon 224985 225218 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 224985 225218 239 - . alignment_id 0 ; Query GL50803_93285-t26_1-p1 ; Align 225219 1 234 utg349_pilon exonerate:protein2genome:local gene 225524 225814 146 + . gene_id 0 ; sequence GL50803_93287-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 225524 225814 . + . utg349_pilon exonerate:protein2genome:local exon 225524 225814 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 225524 225814 146 + . alignment_id 0 ; Query GL50803_93287-t26_1-p1 ; Align 225524 1 21 ; Align 225545 9 270 utg349_pilon exonerate:protein2genome:local gene 338223 338492 146 + . gene_id 0 ; sequence GL50803_93287-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 338223 338492 . + . utg349_pilon exonerate:protein2genome:local exon 338223 338492 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 338223 338492 146 + . alignment_id 0 ; Query GL50803_93287-t26_1-p1 ; Align 338223 9 270 utg349_pilon exonerate:protein2genome:local gene 348824 349093 146 - . gene_id 0 ; sequence GL50803_93287-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 348824 349093 . - . utg349_pilon exonerate:protein2genome:local exon 348824 349093 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 348824 349093 146 - . alignment_id 0 ; Query GL50803_93287-t26_1-p1 ; Align 349094 9 270 utg47_pilon exonerate:protein2genome:local gene 1435714 1440997 5027 - . gene_id 0 ; sequence GL50803_93294-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1438642 1440997 . - . utg47_pilon exonerate:protein2genome:local exon 1438642 1440997 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local splice5 1438640 1438641 . - . intron_id 1 ; splice_site "GA" utg47_pilon exonerate:protein2genome:local intron 1437106 1438641 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1437106 1437107 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1435714 1437105 . - . utg47_pilon exonerate:protein2genome:local exon 1435714 1437105 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1435714 1440997 5027 - . alignment_id 0 ; Query GL50803_93294-t26_1-p1 ; Align 1440998 1 1086 ; Align 1439911 363 1269 ; Align 1437106 786 1392 utg731_pilon exonerate:protein2genome:local gene 438320 440491 2841 + . gene_id 0 ; sequence GL50803_93356-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 438320 440491 . + . utg731_pilon exonerate:protein2genome:local exon 438320 440491 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 438320 440491 2841 + . alignment_id 0 ; Query GL50803_93356-t26_1-p1 ; Align 438320 1 2007 ; Align 440327 671 42 ; Align 440369 686 123 utg731_pilon exonerate:protein2genome:local gene 504922 507585 4365 - . gene_id 0 ; sequence GL50803_93358-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 504922 507585 . - . utg731_pilon exonerate:protein2genome:local exon 504922 507585 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 504922 507585 4365 - . alignment_id 0 ; Query GL50803_93358-t26_1-p1 ; Align 507586 1 2664 utg212_pilon exonerate:protein2genome:local gene 159618 160490 963 - . gene_id 0 ; sequence GL50803_9336-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 159618 160490 . - . utg212_pilon exonerate:protein2genome:local exon 159618 160490 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 159618 160490 963 - . alignment_id 0 ; Query GL50803_9336-t26_1-p1 ; Align 160491 1 873 utg731_pilon exonerate:protein2genome:local gene 518820 519032 179 + . gene_id 0 ; sequence GL50803_93361-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 518820 519032 . + . utg731_pilon exonerate:protein2genome:local exon 518820 519032 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 518820 519032 179 + . alignment_id 0 ; Query GL50803_93361-t26_1-p1 ; Align 518820 11 213 utg731_pilon exonerate:protein2genome:local gene 519294 519536 175 + . gene_id 0 ; sequence GL50803_93362-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 519294 519536 . + . utg731_pilon exonerate:protein2genome:local exon 519294 519536 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 519294 519536 175 + . alignment_id 0 ; Query GL50803_93362-t26_1-p1 ; Align 519294 1 243 utg731_pilon exonerate:protein2genome:local gene 440494 441569 1535 - . gene_id 0 ; sequence GL50803_93372-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 440494 441569 . - . utg731_pilon exonerate:protein2genome:local exon 440494 441569 . - . insertions 12 ; deletions 0 ; frameshifts 5 utg731_pilon exonerate:protein2genome:local similarity 440494 441569 1535 - . alignment_id 0 ; Query GL50803_93372-t26_1-p1 ; Align 441570 1 84 ; Align 441481 29 249 ; Align 441220 112 726 utg64_pilon exonerate:protein2genome:local gene 682919 683164 174 - . gene_id 0 ; sequence GL50803_93456-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 682919 683164 . - . utg64_pilon exonerate:protein2genome:local exon 682919 683164 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 682919 683164 174 - . alignment_id 0 ; Query GL50803_93456-t26_1-p1 ; Align 683165 1 246 utg64_pilon exonerate:protein2genome:local gene 686365 686739 450 + . gene_id 0 ; sequence GL50803_93463-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 686365 686739 . + . utg64_pilon exonerate:protein2genome:local exon 686365 686739 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 686365 686739 450 + . alignment_id 0 ; Query GL50803_93463-t26_1-p1 ; Align 686365 1 375 utg212_pilon exonerate:protein2genome:local gene 171027 173315 3600 + . gene_id 0 ; sequence GL50803_9348-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 171027 173315 . + . utg212_pilon exonerate:protein2genome:local exon 171027 173315 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 171027 173315 3600 + . alignment_id 0 ; Query GL50803_9348-t26_1-p1 ; Align 171027 1 2289 utg308_pilon exonerate:protein2genome:local gene 679077 679316 142 - . gene_id 0 ; sequence GL50803_93488-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 679077 679316 . - . utg308_pilon exonerate:protein2genome:local exon 679077 679316 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 679077 679316 142 - . alignment_id 0 ; Query GL50803_93488-t26_1-p1 ; Align 679317 2 240 utg212_pilon exonerate:protein2genome:local gene 173336 173920 939 + . gene_id 0 ; sequence GL50803_9349-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 173336 173920 . + . utg212_pilon exonerate:protein2genome:local exon 173336 173920 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 173336 173920 939 + . alignment_id 0 ; Query GL50803_9349-t26_1-p1 ; Align 173336 1 585 utg308_pilon exonerate:protein2genome:local gene 670320 670709 265 - . gene_id 0 ; sequence GL50803_93499-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 670320 670709 . - . utg308_pilon exonerate:protein2genome:local exon 670320 670709 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 670320 670709 265 - . alignment_id 0 ; Query GL50803_93499-t26_1-p1 ; Align 670710 3 390 utg308_pilon exonerate:protein2genome:local gene 669690 669884 274 - . gene_id 0 ; sequence GL50803_93501-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 669690 669884 . - . utg308_pilon exonerate:protein2genome:local exon 669690 669884 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 669690 669884 274 - . alignment_id 0 ; Query GL50803_93501-t26_1-p1 ; Align 669885 1 195 utg308_pilon exonerate:protein2genome:local gene 668901 669158 350 - . gene_id 0 ; sequence GL50803_93503-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 668901 669158 . - . utg308_pilon exonerate:protein2genome:local exon 668901 669158 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 668901 669158 350 - . alignment_id 0 ; Query GL50803_93503-t26_1-p1 ; Align 669159 1 258 utg212_pilon exonerate:protein2genome:local gene 176944 181277 5175 - . gene_id 0 ; sequence GL50803_9352-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 176944 181277 . - . utg212_pilon exonerate:protein2genome:local exon 176944 181277 . - . insertions 3 ; deletions 2 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 176944 181277 5175 - . alignment_id 0 ; Query GL50803_9352-t26_1-p1 ; Align 181278 2 54 ; Align 181222 20 492 ; Align 180730 186 3213 ; Align 177514 1257 570 utg212_pilon exonerate:protein2genome:local gene 181232 182551 1811 + . gene_id 0 ; sequence GL50803_9353-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 181232 182551 . + . utg212_pilon exonerate:protein2genome:local exon 181232 182551 . + . insertions 6 ; deletions 0 ; frameshifts 6 utg212_pilon exonerate:protein2genome:local similarity 181232 182551 1811 + . alignment_id 0 ; Query GL50803_9353-t26_1-p1 ; Align 181232 1 396 ; Align 181633 133 3 ; Align 181642 134 228 ; Align 181871 210 681 utg212_pilon exonerate:protein2genome:local gene 182615 186790 5134 - . gene_id 0 ; sequence GL50803_9354-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 182615 186790 . - . utg212_pilon exonerate:protein2genome:local exon 182615 186790 . - . insertions 0 ; deletions 1 ; frameshifts 3 utg212_pilon exonerate:protein2genome:local similarity 182615 186790 5134 - . alignment_id 0 ; Query GL50803_9354-t26_1-p1 ; Align 186791 1 249 ; Align 186541 84 957 ; Align 185583 404 156 ; Align 185426 456 2811 utg308_pilon exonerate:protein2genome:local gene 626771 627100 188 - . gene_id 0 ; sequence GL50803_93541-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 626771 627100 . - . utg308_pilon exonerate:protein2genome:local exon 626771 627100 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 626771 627100 188 - . alignment_id 0 ; Query GL50803_93541-t26_1-p1 ; Align 627101 1 330 utg308_pilon exonerate:protein2genome:local gene 681330 682964 2684 + . gene_id 0 ; sequence GL50803_93548-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 681330 682964 . + . utg308_pilon exonerate:protein2genome:local exon 681330 682964 . + . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 681330 682964 2684 + . alignment_id 0 ; Query GL50803_93548-t26_1-p1 ; Align 681330 1 1041 ; Align 682374 348 591 utg308_pilon exonerate:protein2genome:local gene 616501 616746 204 - . gene_id 0 ; sequence GL50803_93549-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 616501 616746 . - . utg308_pilon exonerate:protein2genome:local exon 616501 616746 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 616501 616746 204 - . alignment_id 0 ; Query GL50803_93549-t26_1-p1 ; Align 616747 1 246 utg212_pilon exonerate:protein2genome:local gene 187197 187598 715 + . gene_id 0 ; sequence GL50803_9355-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 187197 187598 . + . utg212_pilon exonerate:protein2genome:local exon 187197 187598 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 187197 187598 715 + . alignment_id 0 ; Query GL50803_9355-t26_1-p1 ; Align 187197 1 402 utg308_pilon exonerate:protein2genome:local gene 615307 622755 10021 + . gene_id 0 ; sequence GL50803_93550-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 615307 622755 . + . utg308_pilon exonerate:protein2genome:local exon 615307 622755 . + . insertions 0 ; deletions 14 utg308_pilon exonerate:protein2genome:local similarity 615307 622755 10021 + . alignment_id 0 ; Query GL50803_93550-t26_1-p1 ; Align 615307 1 1656 ; Align 616963 554 150 ; Align 617113 607 102 ; Align 617215 642 2526 ; Align 619741 1485 255 ; Align 619996 1572 15 ; Align 620011 1578 111 ; Align 620122 1616 1575 ; Align 621697 2142 120 ; Align 621817 2185 939 utg308_pilon exonerate:protein2genome:local gene 611770 615163 4915 - . gene_id 0 ; sequence GL50803_93551-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 611770 615163 . - . utg308_pilon exonerate:protein2genome:local exon 611770 615163 . - . insertions 0 ; deletions 2 ; frameshifts 4 utg308_pilon exonerate:protein2genome:local similarity 611770 615163 4915 - . alignment_id 0 ; Query GL50803_93551-t26_1-p1 ; Align 615164 1 576 ; Align 614586 194 429 ; Align 614155 338 2385 utg11_pilon exonerate:protein2genome:local gene 813319 814251 1227 + . gene_id 0 ; sequence GL50803_9359-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 813319 814251 . + . utg11_pilon exonerate:protein2genome:local exon 813319 814251 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 813319 814251 1227 + . alignment_id 0 ; Query GL50803_9359-t26_1-p1 ; Align 813319 1 933 utg265_pilon exonerate:protein2genome:local gene 909317 911065 2096 - . gene_id 0 ; sequence GL50803_93601-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 909933 911065 . - . utg265_pilon exonerate:protein2genome:local exon 909933 911065 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 909931 909932 . - . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 909897 909932 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 909897 909898 . - . intron_id 0 ; splice_site "AA" utg265_pilon exonerate:protein2genome:local cds 909317 909896 . - . utg265_pilon exonerate:protein2genome:local exon 909317 909896 . - . insertions 0 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 909317 911065 2096 - . alignment_id 0 ; Query GL50803_93601-t26_1-p1 ; Align 911066 1 1131 ; Align 909896 379 396 ; Align 909500 512 183 utg11_pilon exonerate:protein2genome:local gene 809240 812452 4135 + . gene_id 0 ; sequence GL50803_9363-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 809240 812452 . + . utg11_pilon exonerate:protein2genome:local exon 809240 812452 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 809240 812452 4135 + . alignment_id 0 ; Query GL50803_9363-t26_1-p1 ; Align 809240 639 3213 utg11_pilon exonerate:protein2genome:local gene 802056 804893 3714 + . gene_id 0 ; sequence GL50803_9365-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 802056 804893 . + . utg11_pilon exonerate:protein2genome:local exon 802056 804893 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 802056 804893 3714 + . alignment_id 0 ; Query GL50803_9365-t26_1-p1 ; Align 802056 1 2838 utg212_pilon exonerate:protein2genome:local gene 440268 440525 213 + . gene_id 0 ; sequence GL50803_93669-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 440268 440525 . + . utg212_pilon exonerate:protein2genome:local exon 440268 440525 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 440268 440525 213 + . alignment_id 0 ; Query GL50803_93669-t26_1-p1 ; Align 440268 13 258 utg11_pilon exonerate:protein2genome:local gene 799583 802001 2410 + . gene_id 0 ; sequence GL50803_9367-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 799583 802001 . + . utg11_pilon exonerate:protein2genome:local exon 799583 802001 . + . insertions 6 ; deletions 9 ; frameshifts 4 utg11_pilon exonerate:protein2genome:local similarity 799583 802001 2410 + . alignment_id 0 ; Query GL50803_9367-t26_1-p1 ; Align 799583 1 891 ; Align 800475 299 477 ; Align 800952 463 174 ; Align 801127 521 3 ; Align 801130 523 114 ; Align 801244 563 81 ; Align 801327 590 237 ; Align 801570 669 432 utg308_pilon exonerate:protein2genome:local gene 540116 540808 1152 + . gene_id 0 ; sequence GL50803_93671-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 540116 540808 . + . utg308_pilon exonerate:protein2genome:local exon 540116 540808 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 540116 540808 1152 + . alignment_id 0 ; Query GL50803_93671-t26_1-p1 ; Align 540116 1 693 utg11_pilon exonerate:protein2genome:local gene 798451 799491 1741 - . gene_id 0 ; sequence GL50803_9368-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 798451 799491 . - . utg11_pilon exonerate:protein2genome:local exon 798451 799491 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 798451 799491 1741 - . alignment_id 0 ; Query GL50803_9368-t26_1-p1 ; Align 799492 1 1041 utg308_pilon exonerate:protein2genome:local gene 524907 527366 3747 - . gene_id 0 ; sequence GL50803_93693-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 524907 527366 . - . utg308_pilon exonerate:protein2genome:local exon 524907 527366 . - . insertions 0 ; deletions 2 utg308_pilon exonerate:protein2genome:local similarity 524907 527366 3747 - . alignment_id 0 ; Query GL50803_93693-t26_1-p1 ; Align 527367 1 1626 ; Align 525741 544 21 ; Align 525720 552 813 utg349_pilon exonerate:protein2genome:local gene 1665107 1665388 247 + . gene_id 0 ; sequence GL50803_93715-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1665107 1665388 . + . utg349_pilon exonerate:protein2genome:local exon 1665107 1665388 . + . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 1665107 1665388 247 + . alignment_id 0 ; Query GL50803_93715-t26_1-p1 ; Align 1665107 1 147 ; Align 1665254 52 135 utg349_pilon exonerate:protein2genome:local gene 1660917 1661666 1237 - . gene_id 0 ; sequence GL50803_93721-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1660917 1661666 . - . utg349_pilon exonerate:protein2genome:local exon 1660917 1661666 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1660917 1661666 1237 - . alignment_id 0 ; Query GL50803_93721-t26_1-p1 ; Align 1661667 1 750 utg349_pilon exonerate:protein2genome:local gene 1659910 1660128 146 - . gene_id 0 ; sequence GL50803_93722-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1659910 1660128 . - . utg349_pilon exonerate:protein2genome:local exon 1659910 1660128 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1659910 1660128 146 - . alignment_id 0 ; Query GL50803_93722-t26_1-p1 ; Align 1660129 3 219 utg349_pilon exonerate:protein2genome:local gene 1659036 1659341 445 + . gene_id 0 ; sequence GL50803_93724-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1659036 1659341 . + . utg349_pilon exonerate:protein2genome:local exon 1659036 1659341 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1659036 1659341 445 + . alignment_id 0 ; Query GL50803_93724-t26_1-p1 ; Align 1659036 1 306 utg349_pilon exonerate:protein2genome:local gene 1674471 1688809 20940 - . gene_id 0 ; sequence GL50803_93736-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1674471 1688809 . - . utg349_pilon exonerate:protein2genome:local exon 1674471 1688809 . - . insertions 21 ; deletions 3 ; frameshifts 8 utg349_pilon exonerate:protein2genome:local similarity 1674471 1688809 20940 - . alignment_id 0 ; Query GL50803_93736-t26_1-p1 ; Align 1688810 1 1590 ; Align 1687213 531 96 ; Align 1687116 563 1164 ; Align 1685943 951 174 ; Align 1685768 1009 1275 ; Align 1684493 1435 3021 ; Align 1681471 2442 282 ; Align 1681183 2536 309 ; Align 1680873 2639 3066 ; Align 1677804 3661 1386 ; Align 1676418 4124 1512 ; Align 1674906 4629 435 utg731_pilon exonerate:protein2genome:local gene 960717 960971 386 + . gene_id 0 ; sequence GL50803_93742-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 960717 960971 . + . utg731_pilon exonerate:protein2genome:local exon 960717 960971 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 960717 960971 386 + . alignment_id 0 ; Query GL50803_93742-t26_1-p1 ; Align 960717 1 255 utg731_pilon exonerate:protein2genome:local gene 577976 578276 192 + . gene_id 0 ; sequence GL50803_93743-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 577976 578276 . + . utg731_pilon exonerate:protein2genome:local exon 577976 578276 . + . insertions 9 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 577976 578276 192 + . alignment_id 0 ; Query GL50803_93743-t26_1-p1 ; Align 577976 2 126 ; Align 578111 44 90 ; Align 578202 74 75 utg731_pilon exonerate:protein2genome:local gene 570251 570551 192 - . gene_id 0 ; sequence GL50803_93743-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 570251 570551 . - . utg731_pilon exonerate:protein2genome:local exon 570251 570551 . - . insertions 9 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local similarity 570251 570551 192 - . alignment_id 0 ; Query GL50803_93743-t26_1-p1 ; Align 570552 2 126 ; Align 570417 44 90 ; Align 570326 74 75 utg349_pilon exonerate:protein2genome:local gene 1416935 1419514 4219 + . gene_id 0 ; sequence GL50803_9376-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1416935 1419514 . + . utg349_pilon exonerate:protein2genome:local exon 1416935 1419514 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1416935 1419514 4219 + . alignment_id 0 ; Query GL50803_9376-t26_1-p1 ; Align 1416935 1 1305 ; Align 1418240 437 1275 utg64_pilon exonerate:protein2genome:local gene 777394 777738 407 - . gene_id 0 ; sequence GL50803_93787-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 777394 777738 . - . utg64_pilon exonerate:protein2genome:local exon 777394 777738 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 777394 777738 407 - . alignment_id 0 ; Query GL50803_93787-t26_1-p1 ; Align 777739 1 345 utg47_pilon exonerate:protein2genome:local gene 179703 180233 498 - . gene_id 0 ; sequence GL50803_93800-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 179703 180233 . - . utg47_pilon exonerate:protein2genome:local exon 179703 180233 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 179703 180233 498 - . alignment_id 0 ; Query GL50803_93800-t26_1-p1 ; Align 180234 1 531 utg349_pilon exonerate:protein2genome:local gene 1425069 1426256 1755 + . gene_id 0 ; sequence GL50803_9382-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1425069 1426256 . + . utg349_pilon exonerate:protein2genome:local exon 1425069 1426256 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1425069 1426256 1755 + . alignment_id 0 ; Query GL50803_9382-t26_1-p1 ; Align 1425069 1 1188 utg1966_pilon exonerate:protein2genome:local gene 145546 147912 3311 - . gene_id 0 ; sequence GL50803_93851-t26_1-p1 ; gene_orientation . utg1966_pilon exonerate:protein2genome:local cds 145546 147912 . - . utg1966_pilon exonerate:protein2genome:local exon 145546 147912 . - . insertions 3 ; deletions 3 utg1966_pilon exonerate:protein2genome:local similarity 145546 147912 3311 - . alignment_id 0 ; Query GL50803_93851-t26_1-p1 ; Align 147913 171 138 ; Align 147775 220 807 ; Align 146965 489 1419 utg265_pilon exonerate:protein2genome:local gene 534531 536179 1611 + . gene_id 0 ; sequence GL50803_93856-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 534531 536179 . + . utg265_pilon exonerate:protein2genome:local exon 534531 536179 . + . insertions 0 ; deletions 3 ; frameshifts 2 utg265_pilon exonerate:protein2genome:local similarity 534531 536179 1611 + . alignment_id 0 ; Query GL50803_93856-t26_1-p1 ; Align 534531 1 1299 ; Align 535830 435 6 ; Align 535838 437 21 ; Align 535859 445 141 ; Align 536000 493 180 utg47_pilon exonerate:protein2genome:local gene 639416 639637 217 + . gene_id 0 ; sequence GL50803_93862-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 639416 639637 . + . utg47_pilon exonerate:protein2genome:local exon 639416 639637 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 639416 639637 217 + . alignment_id 0 ; Query GL50803_93862-t26_1-p1 ; Align 639416 2 222 utg265_pilon exonerate:protein2genome:local gene 512893 513135 155 - . gene_id 0 ; sequence GL50803_93877-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 512893 513135 . - . utg265_pilon exonerate:protein2genome:local exon 512893 513135 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 512893 513135 155 - . alignment_id 0 ; Query GL50803_93877-t26_1-p1 ; Align 513136 19 243 utg265_pilon exonerate:protein2genome:local gene 541758 542030 347 + . gene_id 0 ; sequence GL50803_93911-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 541758 542030 . + . utg265_pilon exonerate:protein2genome:local exon 541758 542030 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 541758 542030 347 + . alignment_id 0 ; Query GL50803_93911-t26_1-p1 ; Align 541758 1 273 utg265_pilon exonerate:protein2genome:local gene 441129 441896 1218 - . gene_id 0 ; sequence GL50803_93938-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 441129 441896 . - . utg265_pilon exonerate:protein2genome:local exon 441129 441896 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 441129 441896 1218 - . alignment_id 0 ; Query GL50803_93938-t26_1-p1 ; Align 441897 1 768 utg265_pilon exonerate:protein2genome:local gene 536359 536970 866 - . gene_id 0 ; sequence GL50803_940-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 536359 536970 . - . utg265_pilon exonerate:protein2genome:local exon 536359 536970 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 536359 536970 866 - . alignment_id 0 ; Query GL50803_940-t26_1-p1 ; Align 536971 1 612 utg265_pilon exonerate:protein2genome:local gene 687922 689952 3384 + . gene_id 0 ; sequence GL50803_94003-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 687922 689952 . + . utg265_pilon exonerate:protein2genome:local exon 687922 689952 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 687922 689952 3384 + . alignment_id 0 ; Query GL50803_94003-t26_1-p1 ; Align 687922 1 2031 utg11_pilon exonerate:protein2genome:local gene 641182 641709 567 + . gene_id 0 ; sequence GL50803_94022-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 641182 641709 . + . utg11_pilon exonerate:protein2genome:local exon 641182 641709 . + . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 641182 641709 567 + . alignment_id 0 ; Query GL50803_94022-t26_1-p1 ; Align 641182 1 450 ; Align 641638 151 72 utg11_pilon exonerate:protein2genome:local gene 655655 656182 567 - . gene_id 0 ; sequence GL50803_94022-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 655655 656182 . - . utg11_pilon exonerate:protein2genome:local exon 655655 656182 . - . insertions 6 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 655655 656182 567 - . alignment_id 0 ; Query GL50803_94022-t26_1-p1 ; Align 656183 1 450 ; Align 655727 151 72 utg349_pilon exonerate:protein2genome:local gene 1553328 1553756 432 + . gene_id 0 ; sequence GL50803_94075-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1553328 1553756 . + . utg349_pilon exonerate:protein2genome:local exon 1553328 1553756 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1553328 1553756 432 + . alignment_id 0 ; Query GL50803_94075-t26_1-p1 ; Align 1553328 1 429 utg349_pilon exonerate:protein2genome:local gene 1547945 1548148 235 + . gene_id 0 ; sequence GL50803_94091-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1547945 1548148 . + . utg349_pilon exonerate:protein2genome:local exon 1547945 1548148 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1547945 1548148 235 + . alignment_id 0 ; Query GL50803_94091-t26_1-p1 ; Align 1547945 5 204 utg64_pilon exonerate:protein2genome:local gene 986403 986636 129 - . gene_id 0 ; sequence GL50803_94108-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 986403 986636 . - . utg64_pilon exonerate:protein2genome:local exon 986403 986636 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 986403 986636 129 - . alignment_id 0 ; Query GL50803_94108-t26_1-p1 ; Align 986637 2 234 utg64_pilon exonerate:protein2genome:local gene 990329 996157 9067 + . gene_id 0 ; sequence GL50803_94117-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 990329 996157 . + . utg64_pilon exonerate:protein2genome:local exon 990329 996157 . + . insertions 21 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 990329 996157 9067 + . alignment_id 0 ; Query GL50803_94117-t26_1-p1 ; Align 990329 4 519 ; Align 990857 177 4479 ; Align 995348 1670 810 utg64_pilon exonerate:protein2genome:local gene 1002635 1002874 194 - . gene_id 0 ; sequence GL50803_94127-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1002635 1002874 . - . utg64_pilon exonerate:protein2genome:local exon 1002635 1002874 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1002635 1002874 194 - . alignment_id 0 ; Query GL50803_94127-t26_1-p1 ; Align 1002875 1 240 utg64_pilon exonerate:protein2genome:local gene 1003557 1003805 185 + . gene_id 0 ; sequence GL50803_94128-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1003557 1003805 . + . utg64_pilon exonerate:protein2genome:local exon 1003557 1003805 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1003557 1003805 185 + . alignment_id 0 ; Query GL50803_94128-t26_1-p1 ; Align 1003557 1 249 utg308_pilon exonerate:protein2genome:local gene 216935 218281 2200 + . gene_id 0 ; sequence GL50803_9413-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 216935 218281 . + . utg308_pilon exonerate:protein2genome:local exon 216935 218281 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 216935 218281 2200 + . alignment_id 0 ; Query GL50803_9413-t26_1-p1 ; Align 216935 1 1347 utg64_pilon exonerate:protein2genome:local gene 1012849 1013184 466 - . gene_id 0 ; sequence GL50803_94143-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1012849 1013184 . - . utg64_pilon exonerate:protein2genome:local exon 1012849 1013184 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1012849 1013184 466 - . alignment_id 0 ; Query GL50803_94143-t26_1-p1 ; Align 1013185 1 336 utg64_pilon exonerate:protein2genome:local gene 1017986 1019221 1596 - . gene_id 0 ; sequence GL50803_94150-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1017986 1019221 . - . utg64_pilon exonerate:protein2genome:local exon 1017986 1019221 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1017986 1019221 1596 - . alignment_id 0 ; Query GL50803_94150-t26_1-p1 ; Align 1019222 434 81 ; Align 1019138 461 1152 utg64_pilon exonerate:protein2genome:local gene 1023280 1023540 247 + . gene_id 0 ; sequence GL50803_94157-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 1023280 1023540 . + . utg64_pilon exonerate:protein2genome:local exon 1023280 1023540 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 1023280 1023540 247 + . alignment_id 0 ; Query GL50803_94157-t26_1-p1 ; Align 1023280 1 147 ; Align 1023430 50 111 utg308_pilon exonerate:protein2genome:local gene 230427 230606 108 - . gene_id 0 ; sequence GL50803_9418-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 230427 230606 . - . utg308_pilon exonerate:protein2genome:local exon 230427 230606 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 230427 230606 108 - . alignment_id 0 ; Query GL50803_9418-t26_1-p1 ; Align 230607 14 180 utg11_pilon exonerate:protein2genome:local gene 1387789 1388136 195 - . gene_id 0 ; sequence GL50803_94202-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1387789 1388136 . - . utg11_pilon exonerate:protein2genome:local exon 1387789 1388136 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1387789 1388136 195 - . alignment_id 0 ; Query GL50803_94202-t26_1-p1 ; Align 1388137 3 348 utg308_pilon exonerate:protein2genome:local gene 234028 235779 2925 - . gene_id 0 ; sequence GL50803_9421-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 234028 235779 . - . utg308_pilon exonerate:protein2genome:local exon 234028 235779 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 234028 235779 2925 - . alignment_id 0 ; Query GL50803_9421-t26_1-p1 ; Align 235780 1 1752 utg308_pilon exonerate:protein2genome:local gene 235806 236858 1807 - . gene_id 0 ; sequence GL50803_9422-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 235806 236858 . - . utg308_pilon exonerate:protein2genome:local exon 235806 236858 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 235806 236858 1807 - . alignment_id 0 ; Query GL50803_9422-t26_1-p1 ; Align 236859 1 1053 utg11_pilon exonerate:protein2genome:local gene 1362857 1364194 1942 + . gene_id 0 ; sequence GL50803_94224-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1362857 1364194 . + . utg11_pilon exonerate:protein2genome:local exon 1362857 1364194 . + . insertions 0 ; deletions 0 ; frameshifts 3 utg11_pilon exonerate:protein2genome:local similarity 1362857 1364194 1942 + . alignment_id 0 ; Query GL50803_94224-t26_1-p1 ; Align 1362857 10 357 ; Align 1363215 129 348 ; Align 1363565 245 630 utg731_pilon exonerate:protein2genome:local gene 532200 532718 861 - . gene_id 0 ; sequence GL50803_9427-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 532200 532718 . - . utg731_pilon exonerate:protein2genome:local exon 532200 532718 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 532200 532718 861 - . alignment_id 0 ; Query GL50803_9427-t26_1-p1 ; Align 532719 1 519 utg64_pilon exonerate:protein2genome:local gene 628282 632584 5672 - . gene_id 0 ; sequence GL50803_94287-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 628282 632584 . - . utg64_pilon exonerate:protein2genome:local exon 628282 632584 . - . insertions 18 ; deletions 0 ; frameshifts 1 utg64_pilon exonerate:protein2genome:local similarity 628282 632584 5672 - . alignment_id 0 ; Query GL50803_94287-t26_1-p1 ; Align 632585 1 165 ; Align 632419 56 1950 ; Align 630454 706 510 ; Align 629941 876 1659 utg731_pilon exonerate:protein2genome:local gene 533712 535676 2707 - . gene_id 0 ; sequence GL50803_9430-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 533712 535676 . - . utg731_pilon exonerate:protein2genome:local exon 533712 535676 . - . insertions 0 ; deletions 5 ; frameshifts 3 utg731_pilon exonerate:protein2genome:local similarity 533712 535676 2707 - . alignment_id 0 ; Query GL50803_9430-t26_1-p1 ; Align 535677 1 465 ; Align 535211 156 96 ; Align 535115 192 798 ; Align 534315 459 603 utg64_pilon exonerate:protein2genome:local gene 602646 605999 5396 + . gene_id 0 ; sequence GL50803_94322-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 602646 605999 . + . utg64_pilon exonerate:protein2genome:local exon 602646 605999 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 602646 605999 5396 + . alignment_id 0 ; Query GL50803_94322-t26_1-p1 ; Align 602646 1 3354 utg64_pilon exonerate:protein2genome:local gene 639232 639540 203 - . gene_id 0 ; sequence GL50803_94341-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 639232 639540 . - . utg64_pilon exonerate:protein2genome:local exon 639232 639540 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 639232 639540 203 - . alignment_id 0 ; Query GL50803_94341-t26_1-p1 ; Align 639541 1 309 utg308_pilon exonerate:protein2genome:local gene 298980 299318 214 - . gene_id 0 ; sequence GL50803_94358-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 298980 299318 . - . utg308_pilon exonerate:protein2genome:local exon 298980 299318 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 298980 299318 214 - . alignment_id 0 ; Query GL50803_94358-t26_1-p1 ; Align 299319 1 339 utg47_pilon exonerate:protein2genome:local gene 600377 600643 241 - . gene_id 0 ; sequence GL50803_94359-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 600377 600643 . - . utg47_pilon exonerate:protein2genome:local exon 600377 600643 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 600377 600643 241 - . alignment_id 0 ; Query GL50803_94359-t26_1-p1 ; Align 600644 1 267 utg11_pilon exonerate:protein2genome:local gene 1468322 1485043 27146 + . gene_id 0 ; sequence GL50803_94440-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1468322 1485043 . + . utg11_pilon exonerate:protein2genome:local exon 1468322 1485043 . + . insertions 9 ; deletions 6 utg11_pilon exonerate:protein2genome:local similarity 1468322 1485043 27146 + . alignment_id 0 ; Query GL50803_94440-t26_1-p1 ; Align 1468322 1 732 ; Align 1469060 245 747 ; Align 1469807 499 7089 ; Align 1476899 2862 279 ; Align 1477178 2956 7866 utg11_pilon exonerate:protein2genome:local gene 1503784 1504020 264 - . gene_id 0 ; sequence GL50803_94462-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1503784 1504020 . - . utg11_pilon exonerate:protein2genome:local exon 1503784 1504020 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1503784 1504020 264 - . alignment_id 0 ; Query GL50803_94462-t26_1-p1 ; Align 1504021 1 237 utg11_pilon exonerate:protein2genome:local gene 1443489 1444931 2087 - . gene_id 0 ; sequence GL50803_94463-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1443489 1444931 . - . utg11_pilon exonerate:protein2genome:local exon 1443489 1444931 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1443489 1444931 2087 - . alignment_id 0 ; Query GL50803_94463-t26_1-p1 ; Align 1444932 1 1353 ; Align 1443576 452 87 utg11_pilon exonerate:protein2genome:local gene 1434370 1434897 672 - . gene_id 0 ; sequence GL50803_94470-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1434370 1434897 . - . utg11_pilon exonerate:protein2genome:local exon 1434370 1434897 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1434370 1434897 672 - . alignment_id 0 ; Query GL50803_94470-t26_1-p1 ; Align 1434898 1 330 ; Align 1434568 112 198 utg11_pilon exonerate:protein2genome:local gene 911984 917929 7559 - . gene_id 0 ; sequence GL50803_94478-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 911984 917929 . - . utg11_pilon exonerate:protein2genome:local exon 911984 917929 . - . insertions 12 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 911984 917929 7559 - . alignment_id 0 ; Query GL50803_94478-t26_1-p1 ; Align 917930 1 1203 ; Align 916721 402 510 ; Align 916208 572 3234 ; Align 912971 1650 987 utg99_pilon exonerate:protein2genome:local gene 296034 299222 4094 + . gene_id 0 ; sequence GL50803_94510-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 296034 299222 . + . utg99_pilon exonerate:protein2genome:local exon 296034 299222 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 296034 299222 4094 + . alignment_id 0 ; Query GL50803_94510-t26_1-p1 ; Align 296034 1 3189 utg99_pilon exonerate:protein2genome:local gene 268852 270069 1311 - . gene_id 0 ; sequence GL50803_94525-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 268852 270069 . - . utg99_pilon exonerate:protein2genome:local exon 268852 270069 . - . insertions 12 ; deletions 2 utg99_pilon exonerate:protein2genome:local similarity 268852 270069 1311 - . alignment_id 0 ; Query GL50803_94525-t26_1-p1 ; Align 270070 1 147 ; Align 269920 50 252 ; Align 269668 135 144 ; Align 269524 184 90 ; Align 269425 214 573 utg99_pilon exonerate:protein2genome:local gene 271339 274275 3416 - . gene_id 0 ; sequence GL50803_94534-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 272744 274275 . - . utg99_pilon exonerate:protein2genome:local exon 272744 274275 . - . insertions 0 ; deletions 2 utg99_pilon exonerate:protein2genome:local splice5 272742 272743 . - . intron_id 1 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 272702 272743 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 272702 272703 . - . intron_id 0 ; splice_site "AT" utg99_pilon exonerate:protein2genome:local cds 271339 272701 . - . utg99_pilon exonerate:protein2genome:local exon 271339 272701 . - . insertions 0 ; deletions 1 utg99_pilon exonerate:protein2genome:local similarity 271339 274275 3416 - . alignment_id 0 ; Query GL50803_94534-t26_1-p1 ; Align 274276 1 1092 ; Align 273184 366 417 ; Align 272767 506 21 ; Align 272701 514 552 ; Align 272149 699 810 utg99_pilon exonerate:protein2genome:local gene 146490 150905 5418 + . gene_id 0 ; sequence GL50803_94542-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 146490 150905 . + . utg99_pilon exonerate:protein2genome:local exon 146490 150905 . + . insertions 39 ; deletions 12 utg99_pilon exonerate:protein2genome:local similarity 146490 150905 5418 + . alignment_id 0 ; Query GL50803_94542-t26_1-p1 ; Align 146490 1 1218 ; Align 147720 407 75 ; Align 147795 434 87 ; Align 147882 464 828 ; Align 148710 741 33 ; Align 148743 753 75 ; Align 148827 778 159 ; Align 148986 832 90 ; Align 149085 862 168 ; Align 149259 918 24 ; Align 149283 927 78 ; Align 149361 954 51 ; Align 149412 972 60 ; Align 149472 994 78 ; Align 149553 1020 192 ; Align 149745 1085 1161 utg11_pilon exonerate:protein2genome:local gene 1668561 1668794 294 - . gene_id 0 ; sequence GL50803_94574-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1668561 1668794 . - . utg11_pilon exonerate:protein2genome:local exon 1668561 1668794 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1668561 1668794 294 - . alignment_id 0 ; Query GL50803_94574-t26_1-p1 ; Align 1668795 2 234 utg11_pilon exonerate:protein2genome:local gene 1663129 1664472 2153 + . gene_id 0 ; sequence GL50803_94582-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1663129 1664472 . + . utg11_pilon exonerate:protein2genome:local exon 1663129 1664472 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1663129 1664472 2153 + . alignment_id 0 ; Query GL50803_94582-t26_1-p1 ; Align 1663129 1 1344 utg11_pilon exonerate:protein2genome:local gene 1764651 1764911 259 - . gene_id 0 ; sequence GL50803_94627-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1764651 1764911 . - . utg11_pilon exonerate:protein2genome:local exon 1764651 1764911 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1764651 1764911 259 - . alignment_id 0 ; Query GL50803_94627-t26_1-p1 ; Align 1764912 5 261 utg64_pilon exonerate:protein2genome:local gene 193034 236830 135 + . gene_id 0 ; sequence GL50803_94632-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 193034 193138 . + . utg64_pilon exonerate:protein2genome:local exon 193034 193138 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 193139 193140 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 193139 236767 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 236766 236767 . + . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 236768 236830 . + . utg64_pilon exonerate:protein2genome:local exon 236768 236830 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 193034 236830 135 + . alignment_id 0 ; Query GL50803_94632-t26_1-p1 ; Align 193034 20 105 ; Align 236768 55 63 utg11_pilon exonerate:protein2genome:local gene 1727952 1733177 5586 + . gene_id 0 ; sequence GL50803_94646-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1727952 1733177 . + . utg11_pilon exonerate:protein2genome:local exon 1727952 1733177 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1727952 1733177 5586 + . alignment_id 0 ; Query GL50803_94646-t26_1-p1 ; Align 1727952 1 1659 ; Align 1729611 555 3459 ; Align 1733070 1709 108 utg11_pilon exonerate:protein2genome:local gene 1721926 1725444 5373 + . gene_id 0 ; sequence GL50803_94653-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1721926 1725444 . + . utg11_pilon exonerate:protein2genome:local exon 1721926 1725444 . + . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1721926 1725444 5373 + . alignment_id 0 ; Query GL50803_94653-t26_1-p1 ; Align 1721926 1 921 ; Align 1722850 308 2595 utg11_pilon exonerate:protein2genome:local gene 1720666 1721889 1889 - . gene_id 0 ; sequence GL50803_94654-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1720666 1721889 . - . utg11_pilon exonerate:protein2genome:local exon 1720666 1721889 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1720666 1721889 1889 - . alignment_id 0 ; Query GL50803_94654-t26_1-p1 ; Align 1721890 1 1224 utg11_pilon exonerate:protein2genome:local gene 1714863 1716434 2443 - . gene_id 0 ; sequence GL50803_94658-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1714863 1716434 . - . utg11_pilon exonerate:protein2genome:local exon 1714863 1716434 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1714863 1716434 2443 - . alignment_id 0 ; Query GL50803_94658-t26_1-p1 ; Align 1716435 1 285 ; Align 1716150 97 1287 utg11_pilon exonerate:protein2genome:local gene 1714287 1714577 344 - . gene_id 0 ; sequence GL50803_94659-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1714287 1714577 . - . utg11_pilon exonerate:protein2genome:local exon 1714287 1714577 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1714287 1714577 344 - . alignment_id 0 ; Query GL50803_94659-t26_1-p1 ; Align 1714578 1 291 utg11_pilon exonerate:protein2genome:local gene 1708759 1710603 2447 - . gene_id 0 ; sequence GL50803_94662-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1708759 1710603 . - . utg11_pilon exonerate:protein2genome:local exon 1708759 1710603 . - . insertions 9 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1708759 1710603 2447 - . alignment_id 0 ; Query GL50803_94662-t26_1-p1 ; Align 1710604 1 1170 ; Align 1709431 391 486 ; Align 1708939 553 153 ; Align 1708786 605 27 utg11_pilon exonerate:protein2genome:local gene 1706948 1707151 270 - . gene_id 0 ; sequence GL50803_94663-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1706948 1707151 . - . utg11_pilon exonerate:protein2genome:local exon 1706948 1707151 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1706948 1707151 270 - . alignment_id 0 ; Query GL50803_94663-t26_1-p1 ; Align 1707152 1 204 utg11_pilon exonerate:protein2genome:local gene 1695675 1695869 161 + . gene_id 0 ; sequence GL50803_94673-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1695675 1695869 . + . utg11_pilon exonerate:protein2genome:local exon 1695675 1695869 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1695675 1695869 161 + . alignment_id 0 ; Query GL50803_94673-t26_1-p1 ; Align 1695675 3 195 utg18_pilon exonerate:protein2genome:local gene 422101 422418 316 + . gene_id 0 ; sequence GL50803_94724-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 422101 422418 . + . utg18_pilon exonerate:protein2genome:local exon 422101 422418 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 422101 422418 316 + . alignment_id 0 ; Query GL50803_94724-t26_1-p1 ; Align 422101 1 318 utg18_pilon exonerate:protein2genome:local gene 416855 417112 255 - . gene_id 0 ; sequence GL50803_94729-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 416855 417112 . - . utg18_pilon exonerate:protein2genome:local exon 416855 417112 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 416855 417112 255 - . alignment_id 0 ; Query GL50803_94729-t26_1-p1 ; Align 417113 1 258 utg308_pilon exonerate:protein2genome:local gene 345101 347305 3205 - . gene_id 0 ; sequence GL50803_94762-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 345101 347305 . - . utg308_pilon exonerate:protein2genome:local exon 345101 347305 . - . insertions 3 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 345101 347305 3205 - . alignment_id 0 ; Query GL50803_94762-t26_1-p1 ; Align 347306 373 1368 ; Align 345935 829 834 utg64_pilon exonerate:protein2genome:local gene 641093 641725 949 + . gene_id 0 ; sequence GL50803_9477-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 641093 641725 . + . utg64_pilon exonerate:protein2genome:local exon 641093 641725 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 641093 641725 949 + . alignment_id 0 ; Query GL50803_9477-t26_1-p1 ; Align 641093 1 633 utg64_pilon exonerate:protein2genome:local gene 639863 641077 1678 + . gene_id 0 ; sequence GL50803_9478-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 639863 641077 . + . utg64_pilon exonerate:protein2genome:local exon 639863 641077 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 639863 641077 1678 + . alignment_id 0 ; Query GL50803_9478-t26_1-p1 ; Align 639863 1 1215 utg64_pilon exonerate:protein2genome:local gene 637589 637858 424 - . gene_id 0 ; sequence GL50803_9480-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 637589 637858 . - . utg64_pilon exonerate:protein2genome:local exon 637589 637858 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 637589 637858 424 - . alignment_id 0 ; Query GL50803_9480-t26_1-p1 ; Align 637859 1 270 utg64_pilon exonerate:protein2genome:local gene 637077 637481 709 - . gene_id 0 ; sequence GL50803_9481-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 637077 637481 . - . utg64_pilon exonerate:protein2genome:local exon 637077 637481 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 637077 637481 709 - . alignment_id 0 ; Query GL50803_9481-t26_1-p1 ; Align 637482 1 405 utg64_pilon exonerate:protein2genome:local gene 635394 635732 419 - . gene_id 0 ; sequence GL50803_9483-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 635394 635732 . - . utg64_pilon exonerate:protein2genome:local exon 635394 635732 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 635394 635732 419 - . alignment_id 0 ; Query GL50803_9483-t26_1-p1 ; Align 635733 1 339 utg64_pilon exonerate:protein2genome:local gene 632636 635239 3436 - . gene_id 0 ; sequence GL50803_9485-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 632636 635239 . - . utg64_pilon exonerate:protein2genome:local exon 632636 635239 . - . insertions 6 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 632636 635239 3436 - . alignment_id 0 ; Query GL50803_9485-t26_1-p1 ; Align 635240 1 1056 ; Align 634181 353 1110 ; Align 633068 723 432 utg731_pilon exonerate:protein2genome:local gene 332435 332653 211 + . gene_id 0 ; sequence GL50803_94861-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 332435 332653 . + . utg731_pilon exonerate:protein2genome:local exon 332435 332653 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 332435 332653 211 + . alignment_id 0 ; Query GL50803_94861-t26_1-p1 ; Align 332435 1 219 utg731_pilon exonerate:protein2genome:local gene 339039 339257 211 - . gene_id 0 ; sequence GL50803_94861-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 339039 339257 . - . utg731_pilon exonerate:protein2genome:local exon 339039 339257 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 339039 339257 211 - . alignment_id 0 ; Query GL50803_94861-t26_1-p1 ; Align 339258 1 219 utg11_pilon exonerate:protein2genome:local gene 772991 775774 3347 - . gene_id 0 ; sequence GL50803_9487-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 774544 775774 . - . utg11_pilon exonerate:protein2genome:local exon 774544 775774 . - . insertions 0 ; deletions 4 ; frameshifts 3 utg11_pilon exonerate:protein2genome:local splice5 774542 774543 . - . intron_id 1 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 774514 774543 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 774514 774515 . - . intron_id 0 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local cds 772991 774513 . - . utg11_pilon exonerate:protein2genome:local exon 772991 774513 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 772991 775774 3347 - . alignment_id 0 ; Query GL50803_9487-t26_1-p1 ; Align 775775 1 144 ; Align 775629 50 540 ; Align 775089 233 171 ; Align 774917 290 372 ; Align 774512 415 21 ; Align 774491 423 1500 utg11_pilon exonerate:protein2genome:local gene 775905 776612 958 - . gene_id 0 ; sequence GL50803_9489-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 775905 776612 . - . utg11_pilon exonerate:protein2genome:local exon 775905 776612 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 775905 776612 958 - . alignment_id 0 ; Query GL50803_9489-t26_1-p1 ; Align 776613 1 150 ; Align 776463 53 558 utg11_pilon exonerate:protein2genome:local gene 1074783 1075184 271 - . gene_id 0 ; sequence GL50803_94909-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1074783 1075184 . - . utg11_pilon exonerate:protein2genome:local exon 1074783 1075184 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1074783 1075184 271 - . alignment_id 0 ; Query GL50803_94909-t26_1-p1 ; Align 1075185 9 402 utg11_pilon exonerate:protein2genome:local gene 779018 781381 2671 - . gene_id 0 ; sequence GL50803_9492-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 779018 781381 . - . utg11_pilon exonerate:protein2genome:local exon 779018 781381 . - . insertions 0 ; deletions 2 ; frameshifts 3 utg11_pilon exonerate:protein2genome:local similarity 779018 781381 2671 - . alignment_id 0 ; Query GL50803_9492-t26_1-p1 ; Align 781382 176 1098 ; Align 780282 543 333 ; Align 779949 655 498 ; Align 779450 821 432 utg11_pilon exonerate:protein2genome:local gene 1151326 1154490 4533 - . gene_id 0 ; sequence GL50803_94927-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1151326 1154490 . - . utg11_pilon exonerate:protein2genome:local exon 1151326 1154490 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1151326 1154490 4533 - . alignment_id 0 ; Query GL50803_94927-t26_1-p1 ; Align 1154491 1 3165 utg11_pilon exonerate:protein2genome:local gene 633627 785120 2342 - . gene_id 0 ; sequence GL50803_9493-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 783217 785120 . - . utg11_pilon exonerate:protein2genome:local exon 783217 785120 . - . insertions 0 ; deletions 0 ; frameshifts 1 utg11_pilon exonerate:protein2genome:local splice5 783215 783216 . - . intron_id 1 ; splice_site "AT" utg11_pilon exonerate:protein2genome:local intron 665434 783216 . - . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 665434 665435 . - . intron_id 0 ; splice_site "CG" utg11_pilon exonerate:protein2genome:local cds 665325 665433 . - . utg11_pilon exonerate:protein2genome:local exon 665325 665433 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local splice5 665323 665324 . - . intron_id 2 ; splice_site "GT" utg11_pilon exonerate:protein2genome:local intron 633667 665324 . - . intron_id 2 utg11_pilon exonerate:protein2genome:local splice3 633667 633668 . - . intron_id 1 ; splice_site "TG" utg11_pilon exonerate:protein2genome:local cds 633627 633666 . - . utg11_pilon exonerate:protein2genome:local exon 633627 633666 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 633627 785120 2342 - . alignment_id 0 ; Query GL50803_9493-t26_1-p1 ; Align 785121 1 1089 ; Align 784031 364 813 ; Align 665432 636 105 ; Align 633666 672 39 utg11_pilon exonerate:protein2genome:local gene 1133060 1133284 301 + . gene_id 0 ; sequence GL50803_94945-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1133060 1133284 . + . utg11_pilon exonerate:protein2genome:local exon 1133060 1133284 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1133060 1133284 301 + . alignment_id 0 ; Query GL50803_94945-t26_1-p1 ; Align 1133060 1 225 utg11_pilon exonerate:protein2genome:local gene 1117760 1117966 119 + . gene_id 0 ; sequence GL50803_94963-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1117760 1117966 . + . utg11_pilon exonerate:protein2genome:local exon 1117760 1117966 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1117760 1117966 119 + . alignment_id 0 ; Query GL50803_94963-t26_1-p1 ; Align 1117760 1 207 utg265_pilon exonerate:protein2genome:local gene 45576 47666 2436 + . gene_id 0 ; sequence GL50803_95001-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 45576 47666 . + . utg265_pilon exonerate:protein2genome:local exon 45576 47666 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 45576 47666 2436 + . alignment_id 0 ; Query GL50803_95001-t26_1-p1 ; Align 45576 1 2091 utg265_pilon exonerate:protein2genome:local gene 47739 50477 3820 - . gene_id 0 ; sequence GL50803_95003-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 47739 50477 . - . utg265_pilon exonerate:protein2genome:local exon 47739 50477 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 47739 50477 3820 - . alignment_id 0 ; Query GL50803_95003-t26_1-p1 ; Align 50478 1 2739 utg265_pilon exonerate:protein2genome:local gene 68008 70971 4210 + . gene_id 0 ; sequence GL50803_95023-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 68008 70971 . + . utg265_pilon exonerate:protein2genome:local exon 68008 70971 . + . insertions 3 ; deletions 1 utg265_pilon exonerate:protein2genome:local similarity 68008 70971 4210 + . alignment_id 0 ; Query GL50803_95023-t26_1-p1 ; Align 68008 1 351 ; Align 68359 119 2292 ; Align 70654 883 318 utg349_pilon exonerate:protein2genome:local gene 1598759 1599679 1456 + . gene_id 0 ; sequence GL50803_9503-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1598759 1599679 . + . utg349_pilon exonerate:protein2genome:local exon 1598759 1599679 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1598759 1599679 1456 + . alignment_id 0 ; Query GL50803_9503-t26_1-p1 ; Align 1598759 1 921 utg349_pilon exonerate:protein2genome:local gene 1599859 1600779 1190 + . gene_id 0 ; sequence GL50803_9504-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1599859 1600779 . + . utg349_pilon exonerate:protein2genome:local exon 1599859 1600779 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1599859 1600779 1190 + . alignment_id 0 ; Query GL50803_9504-t26_1-p1 ; Align 1599859 1 921 utg349_pilon exonerate:protein2genome:local gene 1600820 1600987 281 - . gene_id 0 ; sequence GL50803_9505-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1600820 1600987 . - . utg349_pilon exonerate:protein2genome:local exon 1600820 1600987 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1600820 1600987 281 - . alignment_id 0 ; Query GL50803_9505-t26_1-p1 ; Align 1600988 1 168 utg349_pilon exonerate:protein2genome:local gene 1601085 1601732 935 + . gene_id 0 ; sequence GL50803_9506-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1601085 1601732 . + . utg349_pilon exonerate:protein2genome:local exon 1601085 1601732 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1601085 1601732 935 + . alignment_id 0 ; Query GL50803_9506-t26_1-p1 ; Align 1601085 1 648 utg731_pilon exonerate:protein2genome:local gene 1399702 1400907 1979 + . gene_id 0 ; sequence GL50803_95064-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1399702 1400907 . + . utg731_pilon exonerate:protein2genome:local exon 1399702 1400907 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1399702 1400907 1979 + . alignment_id 0 ; Query GL50803_95064-t26_1-p1 ; Align 1399702 1 1206 utg349_pilon exonerate:protein2genome:local gene 1602561 1606058 4996 + . gene_id 0 ; sequence GL50803_9508-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1602561 1606058 . + . utg349_pilon exonerate:protein2genome:local exon 1602561 1606058 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1602561 1606058 4996 + . alignment_id 0 ; Query GL50803_9508-t26_1-p1 ; Align 1602561 6 786 ; Align 1603347 269 2712 utg349_pilon exonerate:protein2genome:local gene 1608372 1608533 260 - . gene_id 0 ; sequence GL50803_9509-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1608372 1608533 . - . utg349_pilon exonerate:protein2genome:local exon 1608372 1608533 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1608372 1608533 260 - . alignment_id 0 ; Query GL50803_9509-t26_1-p1 ; Align 1608534 1 162 utg731_pilon exonerate:protein2genome:local gene 1364461 1364859 439 + . gene_id 0 ; sequence GL50803_95091-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1364461 1364859 . + . utg731_pilon exonerate:protein2genome:local exon 1364461 1364859 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1364461 1364859 439 + . alignment_id 0 ; Query GL50803_95091-t26_1-p1 ; Align 1364461 1 399 utg349_pilon exonerate:protein2genome:local gene 1608607 1609281 934 + . gene_id 0 ; sequence GL50803_9511-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1608607 1609281 . + . utg349_pilon exonerate:protein2genome:local exon 1608607 1609281 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1608607 1609281 934 + . alignment_id 0 ; Query GL50803_9511-t26_1-p1 ; Align 1608607 1 675 utg349_pilon exonerate:protein2genome:local gene 925144 925368 230 + . gene_id 0 ; sequence GL50803_95126-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 925144 925368 . + . utg349_pilon exonerate:protein2genome:local exon 925144 925368 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 925144 925368 230 + . alignment_id 0 ; Query GL50803_95126-t26_1-p1 ; Align 925144 5 225 utg349_pilon exonerate:protein2genome:local gene 940471 940926 636 - . gene_id 0 ; sequence GL50803_95139-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 940471 940926 . - . utg349_pilon exonerate:protein2genome:local exon 940471 940926 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 940471 940926 636 - . alignment_id 0 ; Query GL50803_95139-t26_1-p1 ; Align 940927 1 456 utg349_pilon exonerate:protein2genome:local gene 1612019 1614637 3685 + . gene_id 0 ; sequence GL50803_9515-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1612019 1614637 . + . utg349_pilon exonerate:protein2genome:local exon 1612019 1614637 . + . insertions 6 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1612019 1614637 3685 + . alignment_id 0 ; Query GL50803_9515-t26_1-p1 ; Align 1612019 503 1608 ; Align 1613627 1040 930 ; Align 1614563 1350 75 utg99_pilon exonerate:protein2genome:local gene 40353 40631 254 - . gene_id 0 ; sequence GL50803_95155-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 40353 40631 . - . utg99_pilon exonerate:protein2genome:local exon 40353 40631 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 40353 40631 254 - . alignment_id 0 ; Query GL50803_95155-t26_1-p1 ; Align 40632 3 279 utg99_pilon exonerate:protein2genome:local gene 23459 23734 323 + . gene_id 0 ; sequence GL50803_95158-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 23459 23734 . + . utg99_pilon exonerate:protein2genome:local exon 23459 23734 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 23459 23734 323 + . alignment_id 0 ; Query GL50803_95158-t26_1-p1 ; Align 23459 1 276 utg99_pilon exonerate:protein2genome:local gene 19279 20994 2673 - . gene_id 0 ; sequence GL50803_95162-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 19279 20994 . - . utg99_pilon exonerate:protein2genome:local exon 19279 20994 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 19279 20994 2673 - . alignment_id 0 ; Query GL50803_95162-t26_1-p1 ; Align 20995 1 1716 utg731_pilon exonerate:protein2genome:local gene 352228 352563 331 + . gene_id 0 ; sequence GL50803_95176-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 352228 352563 . + . utg731_pilon exonerate:protein2genome:local exon 352228 352563 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 352228 352563 331 + . alignment_id 0 ; Query GL50803_95176-t26_1-p1 ; Align 352228 1 129 ; Align 352357 46 207 utg731_pilon exonerate:protein2genome:local gene 362259 362519 332 - . gene_id 0 ; sequence GL50803_95188-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 362259 362519 . - . utg731_pilon exonerate:protein2genome:local exon 362259 362519 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 362259 362519 332 - . alignment_id 0 ; Query GL50803_95188-t26_1-p1 ; Align 362520 1 261 utg731_pilon exonerate:protein2genome:local gene 364818 365075 319 - . gene_id 0 ; sequence GL50803_95190-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 364818 365075 . - . utg731_pilon exonerate:protein2genome:local exon 364818 365075 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 364818 365075 319 - . alignment_id 0 ; Query GL50803_95190-t26_1-p1 ; Align 365076 1 258 utg731_pilon exonerate:protein2genome:local gene 366586 370044 4713 + . gene_id 0 ; sequence GL50803_95192-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 366586 368631 . + . utg731_pilon exonerate:protein2genome:local exon 366586 368631 . + . insertions 6 ; deletions 3 utg731_pilon exonerate:protein2genome:local splice5 368632 368633 . + . intron_id 1 ; splice_site "CA" utg731_pilon exonerate:protein2genome:local intron 368632 368661 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 368660 368661 . + . intron_id 0 ; splice_site "CT" utg731_pilon exonerate:protein2genome:local cds 368662 370044 . + . utg731_pilon exonerate:protein2genome:local exon 368662 370044 . + . insertions 0 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 366586 370044 4713 + . alignment_id 0 ; Query GL50803_95192-t26_1-p1 ; Align 366586 1 969 ; Align 367558 324 90 ; Align 367651 354 345 ; Align 367996 470 186 ; Align 368182 534 450 ; Align 368662 684 216 ; Align 368878 757 114 ; Align 368992 796 1053 utg349_pilon exonerate:protein2genome:local gene 1618892 1619086 266 - . gene_id 0 ; sequence GL50803_9520-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1618892 1619086 . - . utg349_pilon exonerate:protein2genome:local exon 1618892 1619086 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1618892 1619086 266 - . alignment_id 0 ; Query GL50803_9520-t26_1-p1 ; Align 1619087 1 195 utg349_pilon exonerate:protein2genome:local gene 1619258 1620235 1283 + . gene_id 0 ; sequence GL50803_9523-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1619258 1620235 . + . utg349_pilon exonerate:protein2genome:local exon 1619258 1620235 . + . insertions 0 ; deletions 5 utg349_pilon exonerate:protein2genome:local similarity 1619258 1620235 1283 + . alignment_id 0 ; Query GL50803_9523-t26_1-p1 ; Align 1619258 1 549 ; Align 1619807 187 24 ; Align 1619831 197 405 utg265_pilon exonerate:protein2genome:local gene 19000 20457 1883 + . gene_id 0 ; sequence GL50803_95233-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 19000 20457 . + . utg265_pilon exonerate:protein2genome:local exon 19000 20457 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 19000 20457 1883 + . alignment_id 0 ; Query GL50803_95233-t26_1-p1 ; Align 19000 1 1458 utg349_pilon exonerate:protein2genome:local gene 395829 397634 2738 + . gene_id 0 ; sequence GL50803_95254-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 395829 397634 . + . utg349_pilon exonerate:protein2genome:local exon 395829 397634 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 395829 397634 2738 + . alignment_id 0 ; Query GL50803_95254-t26_1-p1 ; Align 395829 311 1776 ; Align 397605 904 30 utg349_pilon exonerate:protein2genome:local gene 386149 386547 632 - . gene_id 0 ; sequence GL50803_95269-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 386149 386547 . - . utg349_pilon exonerate:protein2genome:local exon 386149 386547 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 386149 386547 632 - . alignment_id 0 ; Query GL50803_95269-t26_1-p1 ; Align 386548 1 399 utg349_pilon exonerate:protein2genome:local gene 378523 378771 289 - . gene_id 0 ; sequence GL50803_95277-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 378523 378771 . - . utg349_pilon exonerate:protein2genome:local exon 378523 378771 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 378523 378771 289 - . alignment_id 0 ; Query GL50803_95277-t26_1-p1 ; Align 378772 1 249 utg11_pilon exonerate:protein2genome:local gene 1051523 1052536 1371 - . gene_id 0 ; sequence GL50803_9528-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1051523 1052536 . - . utg11_pilon exonerate:protein2genome:local exon 1051523 1052536 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1051523 1052536 1371 - . alignment_id 0 ; Query GL50803_9528-t26_1-p1 ; Align 1052537 1 1014 utg11_pilon exonerate:protein2genome:local gene 1052560 1053498 1434 + . gene_id 0 ; sequence GL50803_9529-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1052560 1053498 . + . utg11_pilon exonerate:protein2genome:local exon 1052560 1053498 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1052560 1053498 1434 + . alignment_id 0 ; Query GL50803_9529-t26_1-p1 ; Align 1052560 1 939 utg349_pilon exonerate:protein2genome:local gene 368907 369530 736 - . gene_id 0 ; sequence GL50803_95290-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 368907 369530 . - . utg349_pilon exonerate:protein2genome:local exon 368907 369530 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 368907 369530 736 - . alignment_id 0 ; Query GL50803_95290-t26_1-p1 ; Align 369531 1 330 ; Align 369201 112 294 utg11_pilon exonerate:protein2genome:local gene 1053505 1054035 515 + . gene_id 0 ; sequence GL50803_9530-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1053505 1054035 . + . utg11_pilon exonerate:protein2genome:local exon 1053505 1054035 . + . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1053505 1054035 515 + . alignment_id 0 ; Query GL50803_9530-t26_1-p1 ; Align 1053505 1 201 ; Align 1053706 69 330 utg11_pilon exonerate:protein2genome:local gene 1058967 1059203 320 - . gene_id 0 ; sequence GL50803_9535-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1058967 1059203 . - . utg11_pilon exonerate:protein2genome:local exon 1058967 1059203 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1058967 1059203 320 - . alignment_id 0 ; Query GL50803_9535-t26_1-p1 ; Align 1059204 1 237 utg47_pilon exonerate:protein2genome:local gene 1607525 1607820 374 - . gene_id 0 ; sequence GL50803_95351-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1607525 1607820 . - . utg47_pilon exonerate:protein2genome:local exon 1607525 1607820 . - . insertions 0 ; deletions 0 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 1607525 1607820 374 - . alignment_id 0 ; Query GL50803_95351-t26_1-p1 ; Align 1607821 1 255 ; Align 1607564 86 39 utg308_pilon exonerate:protein2genome:local gene 690304 691875 1795 - . gene_id 0 ; sequence GL50803_95406-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 690304 691875 . - . utg308_pilon exonerate:protein2genome:local exon 690304 691875 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 690304 691875 1795 - . alignment_id 0 ; Query GL50803_95406-t26_1-p1 ; Align 691876 1 1572 utg11_pilon exonerate:protein2genome:local gene 1431996 1432556 892 + . gene_id 0 ; sequence GL50803_9541-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1431996 1432556 . + . utg11_pilon exonerate:protein2genome:local exon 1431996 1432556 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1431996 1432556 892 + . alignment_id 0 ; Query GL50803_9541-t26_1-p1 ; Align 1431996 1 561 utg308_pilon exonerate:protein2genome:local gene 713642 713965 253 + . gene_id 0 ; sequence GL50803_95430-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 713642 713965 . + . utg308_pilon exonerate:protein2genome:local exon 713642 713965 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 713642 713965 253 + . alignment_id 0 ; Query GL50803_95430-t26_1-p1 ; Align 713642 1 324 utg308_pilon exonerate:protein2genome:local gene 730258 730479 239 + . gene_id 0 ; sequence GL50803_95447-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 730258 730479 . + . utg308_pilon exonerate:protein2genome:local exon 730258 730479 . + . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 730258 730479 239 + . alignment_id 0 ; Query GL50803_95447-t26_1-p1 ; Align 730258 1 222 utg308_pilon exonerate:protein2genome:local gene 730923 731285 276 + . gene_id 0 ; sequence GL50803_95449-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 730923 731285 . + . utg308_pilon exonerate:protein2genome:local exon 730923 731285 . + . insertions 6 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 730923 731285 276 + . alignment_id 0 ; Query GL50803_95449-t26_1-p1 ; Align 730923 1 147 ; Align 731076 50 210 utg11_pilon exonerate:protein2genome:local gene 1442470 1443462 1505 - . gene_id 0 ; sequence GL50803_9545-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1442470 1443462 . - . utg11_pilon exonerate:protein2genome:local exon 1442470 1443462 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1442470 1443462 1505 - . alignment_id 0 ; Query GL50803_9545-t26_1-p1 ; Align 1443463 4 993 utg308_pilon exonerate:protein2genome:local gene 683593 684417 897 + . gene_id 0 ; sequence GL50803_95451-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 683593 684417 . + . utg308_pilon exonerate:protein2genome:local exon 683593 684417 . + . insertions 9 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 683593 684417 897 + . alignment_id 0 ; Query GL50803_95451-t26_1-p1 ; Align 683593 1 735 ; Align 684337 246 81 utg308_pilon exonerate:protein2genome:local gene 744643 744894 328 - . gene_id 0 ; sequence GL50803_95464-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 744643 744894 . - . utg308_pilon exonerate:protein2genome:local exon 744643 744894 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 744643 744894 328 - . alignment_id 0 ; Query GL50803_95464-t26_1-p1 ; Align 744895 1 252 utg212_pilon exonerate:protein2genome:local gene 169037 170575 1776 - . gene_id 0 ; sequence GL50803_9548-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 169037 170575 . - . utg212_pilon exonerate:protein2genome:local exon 169037 170575 . - . insertions 3 ; deletions 1 utg212_pilon exonerate:protein2genome:local similarity 169037 170575 1776 - . alignment_id 0 ; Query GL50803_9548-t26_1-p1 ; Align 170576 10 678 ; Align 169895 236 342 ; Align 169553 351 516 utg11_pilon exonerate:protein2genome:local gene 215344 215469 138 + . gene_id 0 ; sequence GL50803_9553-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 215344 215469 . + . utg11_pilon exonerate:protein2genome:local exon 215344 215469 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 215344 215469 138 + . alignment_id 0 ; Query GL50803_9553-t26_1-p1 ; Align 215344 1 126 utg731_pilon exonerate:protein2genome:local gene 655033 658086 3533 - . gene_id 0 ; sequence GL50803_95530-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 655033 658086 . - . utg731_pilon exonerate:protein2genome:local exon 655033 658086 . - . insertions 9 ; deletions 6 utg731_pilon exonerate:protein2genome:local similarity 655033 658086 3533 - . alignment_id 0 ; Query GL50803_95530-t26_1-p1 ; Align 658087 550 51 ; Align 658033 567 36 ; Align 657994 579 420 ; Align 657571 719 813 ; Align 656758 992 276 ; Align 656482 1088 1449 utg731_pilon exonerate:protein2genome:local gene 672747 675059 3403 + . gene_id 0 ; sequence GL50803_95549-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 672747 675059 . + . utg731_pilon exonerate:protein2genome:local exon 672747 675059 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 672747 675059 3403 + . alignment_id 0 ; Query GL50803_95549-t26_1-p1 ; Align 672747 1 2313 utg731_pilon exonerate:protein2genome:local gene 680909 681220 289 + . gene_id 0 ; sequence GL50803_95556-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 680909 681220 . + . utg731_pilon exonerate:protein2genome:local exon 680909 681220 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 680909 681220 289 + . alignment_id 0 ; Query GL50803_95556-t26_1-p1 ; Align 680909 1 312 utg731_pilon exonerate:protein2genome:local gene 678983 681388 3507 - . gene_id 0 ; sequence GL50803_95557-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 678983 681388 . - . utg731_pilon exonerate:protein2genome:local exon 678983 681388 . - . insertions 3 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 678983 681388 3507 - . alignment_id 0 ; Query GL50803_95557-t26_1-p1 ; Align 681389 1 1878 ; Align 679508 627 525 utg731_pilon exonerate:protein2genome:local gene 687566 832918 3825 + . gene_id 0 ; sequence GL50803_95563-t26_1-p1 ; gene_orientation + utg731_pilon exonerate:protein2genome:local cds 687566 690483 . + . utg731_pilon exonerate:protein2genome:local exon 687566 690483 . + . insertions 18 ; deletions 0 ; frameshifts 1 utg731_pilon exonerate:protein2genome:local splice5 690484 690485 . + . intron_id 1 ; splice_site "GA" utg731_pilon exonerate:protein2genome:local intron 690484 832865 . + . intron_id 1 utg731_pilon exonerate:protein2genome:local splice3 832864 832865 . + . intron_id 0 ; splice_site "AA" utg731_pilon exonerate:protein2genome:local cds 832866 832918 . + . utg731_pilon exonerate:protein2genome:local exon 832866 832918 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 687566 832918 3825 + . alignment_id 0 ; Query GL50803_95563-t26_1-p1 ; Align 687566 1 756 ; Align 688323 253 1692 ; Align 690027 817 306 ; Align 690339 919 144 ; Align 832868 968 51 utg731_pilon exonerate:protein2genome:local gene 708156 708572 487 - . gene_id 0 ; sequence GL50803_95578-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 708156 708572 . - . utg731_pilon exonerate:protein2genome:local exon 708156 708572 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 708156 708572 487 - . alignment_id 0 ; Query GL50803_95578-t26_1-p1 ; Align 708573 1 417 utg11_pilon exonerate:protein2genome:local gene 211256 211891 1028 - . gene_id 0 ; sequence GL50803_9558-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 211256 211891 . - . utg11_pilon exonerate:protein2genome:local exon 211256 211891 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 211256 211891 1028 - . alignment_id 0 ; Query GL50803_9558-t26_1-p1 ; Align 211892 1 636 utg11_pilon exonerate:protein2genome:local gene 210982 211101 148 + . gene_id 0 ; sequence GL50803_9559-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 210982 211101 . + . utg11_pilon exonerate:protein2genome:local exon 210982 211101 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 210982 211101 148 + . alignment_id 0 ; Query GL50803_9559-t26_1-p1 ; Align 210982 1 120 utg731_pilon exonerate:protein2genome:local gene 716322 717449 1958 - . gene_id 0 ; sequence GL50803_95593-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 716322 717449 . - . utg731_pilon exonerate:protein2genome:local exon 716322 717449 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 716322 717449 1958 - . alignment_id 0 ; Query GL50803_95593-t26_1-p1 ; Align 717450 1 1128 utg731_pilon exonerate:protein2genome:local gene 735364 735663 200 + . gene_id 0 ; sequence GL50803_95602-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 735364 735663 . + . utg731_pilon exonerate:protein2genome:local exon 735364 735663 . + . insertions 3 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 735364 735663 200 + . alignment_id 0 ; Query GL50803_95602-t26_1-p1 ; Align 735364 1 78 ; Align 735445 27 84 ; Align 735529 56 135 utg731_pilon exonerate:protein2genome:local gene 740646 740852 318 - . gene_id 0 ; sequence GL50803_95609-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 740646 740852 . - . utg731_pilon exonerate:protein2genome:local exon 740646 740852 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 740646 740852 318 - . alignment_id 0 ; Query GL50803_95609-t26_1-p1 ; Align 740853 1 207 utg731_pilon exonerate:protein2genome:local gene 745804 746019 204 + . gene_id 0 ; sequence GL50803_95618-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 745804 746019 . + . utg731_pilon exonerate:protein2genome:local exon 745804 746019 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 745804 746019 204 + . alignment_id 0 ; Query GL50803_95618-t26_1-p1 ; Align 745804 1 216 utg18_pilon exonerate:protein2genome:local gene 248174 248473 410 - . gene_id 0 ; sequence GL50803_95633-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 248174 248473 . - . utg18_pilon exonerate:protein2genome:local exon 248174 248473 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 248174 248473 410 - . alignment_id 0 ; Query GL50803_95633-t26_1-p1 ; Align 248474 1 300 utg18_pilon exonerate:protein2genome:local gene 249184 251718 3004 + . gene_id 0 ; sequence GL50803_95639-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 249184 251220 . + . utg18_pilon exonerate:protein2genome:local exon 249184 251220 . + . insertions 0 ; deletions 1 utg18_pilon exonerate:protein2genome:local splice5 251221 251222 . + . intron_id 1 ; splice_site "TT" utg18_pilon exonerate:protein2genome:local intron 251221 251343 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 251342 251343 . + . intron_id 0 ; splice_site "AT" utg18_pilon exonerate:protein2genome:local cds 251344 251718 . + . utg18_pilon exonerate:protein2genome:local exon 251344 251718 . + . insertions 15 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 249184 251718 3004 + . alignment_id 0 ; Query GL50803_95639-t26_1-p1 ; Align 249184 2 1674 ; Align 250858 561 363 ; Align 251344 682 168 ; Align 251527 738 192 utg11_pilon exonerate:protein2genome:local gene 199892 202567 2731 - . gene_id 0 ; sequence GL50803_9565-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 199892 202567 . - . utg11_pilon exonerate:protein2genome:local exon 199892 202567 . - . insertions 6 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 199892 202567 2731 - . alignment_id 0 ; Query GL50803_9565-t26_1-p1 ; Align 202568 1 306 ; Align 202256 103 603 ; Align 201653 305 1401 ; Align 200252 775 360 utg99_pilon exonerate:protein2genome:local gene 59757 62156 3790 + . gene_id 0 ; sequence GL50803_95653-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 59757 62156 . + . utg99_pilon exonerate:protein2genome:local exon 59757 62156 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 59757 62156 3790 + . alignment_id 0 ; Query GL50803_95653-t26_1-p1 ; Align 59757 1 2400 utg99_pilon exonerate:protein2genome:local gene 68649 70946 3633 - . gene_id 0 ; sequence GL50803_95661-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 68649 70946 . - . utg99_pilon exonerate:protein2genome:local exon 68649 70946 . - . insertions 3 ; deletions 4 utg99_pilon exonerate:protein2genome:local similarity 68649 70946 3633 - . alignment_id 0 ; Query GL50803_95661-t26_1-p1 ; Align 70947 1 1728 ; Align 69219 581 333 ; Align 68883 692 234 utg731_pilon exonerate:protein2genome:local gene 929214 929423 198 + . gene_id 0 ; sequence GL50803_95687-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 929214 929423 . + . utg731_pilon exonerate:protein2genome:local exon 929214 929423 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 929214 929423 198 + . alignment_id 0 ; Query GL50803_95687-t26_1-p1 ; Align 929214 1 210 utg731_pilon exonerate:protein2genome:local gene 922587 923105 402 - . gene_id 0 ; sequence GL50803_95690-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 922587 923105 . - . utg731_pilon exonerate:protein2genome:local exon 922587 923105 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 922587 923105 402 - . alignment_id 0 ; Query GL50803_95690-t26_1-p1 ; Align 923106 1 519 utg731_pilon exonerate:protein2genome:local gene 942056 942712 1032 - . gene_id 0 ; sequence GL50803_95693-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 942056 942712 . - . utg731_pilon exonerate:protein2genome:local exon 942056 942712 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 942056 942712 1032 - . alignment_id 0 ; Query GL50803_95693-t26_1-p1 ; Align 942713 1 657 utg731_pilon exonerate:protein2genome:local gene 914632 914895 276 + . gene_id 0 ; sequence GL50803_95699-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 914632 914895 . + . utg731_pilon exonerate:protein2genome:local exon 914632 914895 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 914632 914895 276 + . alignment_id 0 ; Query GL50803_95699-t26_1-p1 ; Align 914632 1 264 utg11_pilon exonerate:protein2genome:local gene 193140 194144 1434 + . gene_id 0 ; sequence GL50803_9571-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 193140 194144 . + . utg11_pilon exonerate:protein2genome:local exon 193140 194144 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 193140 194144 1434 + . alignment_id 0 ; Query GL50803_9571-t26_1-p1 ; Align 193140 1 1005 utg731_pilon exonerate:protein2genome:local gene 933805 936879 4701 + . gene_id 0 ; sequence GL50803_95717-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 933805 936879 . + . utg731_pilon exonerate:protein2genome:local exon 933805 936879 . + . insertions 3 ; deletions 1 utg731_pilon exonerate:protein2genome:local similarity 933805 936879 4701 + . alignment_id 0 ; Query GL50803_95717-t26_1-p1 ; Align 933805 1 873 ; Align 934678 293 390 ; Align 935071 423 1809 utg11_pilon exonerate:protein2genome:local gene 191388 191504 105 - . gene_id 0 ; sequence GL50803_9572-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 191388 191504 . - . utg11_pilon exonerate:protein2genome:local exon 191388 191504 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 191388 191504 105 - . alignment_id 0 ; Query GL50803_9572-t26_1-p1 ; Align 191505 4 117 utg11_pilon exonerate:protein2genome:local gene 191583 193094 1723 + . gene_id 0 ; sequence GL50803_9573-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 191583 193094 . + . utg11_pilon exonerate:protein2genome:local exon 191583 193094 . + . insertions 0 ; deletions 3 utg11_pilon exonerate:protein2genome:local similarity 191583 193094 1723 + . alignment_id 0 ; Query GL50803_9573-t26_1-p1 ; Align 191583 252 450 ; Align 192033 404 708 ; Align 192741 641 354 utg47_pilon exonerate:protein2genome:local gene 1946536 1949778 3313 + . gene_id 0 ; sequence GL50803_95786-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1946536 1949778 . + . utg47_pilon exonerate:protein2genome:local exon 1946536 1949778 . + . insertions 12 ; deletions 7 utg47_pilon exonerate:protein2genome:local similarity 1946536 1949778 3313 + . alignment_id 0 ; Query GL50803_95786-t26_1-p1 ; Align 1946536 1 801 ; Align 1947337 269 39 ; Align 1947379 282 66 ; Align 1947445 305 543 ; Align 1947988 487 99 ; Align 1948087 521 129 ; Align 1948216 565 483 ; Align 1948699 727 297 ; Align 1948996 827 369 ; Align 1949374 950 405 utg47_pilon exonerate:protein2genome:local gene 1949808 1953584 5745 - . gene_id 0 ; sequence GL50803_95787-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1949808 1953584 . - . utg47_pilon exonerate:protein2genome:local exon 1949808 1953584 . - . insertions 3 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 1949808 1953584 5745 - . alignment_id 0 ; Query GL50803_95787-t26_1-p1 ; Align 1953585 1 510 ; Align 1953072 171 1986 ; Align 1951086 836 471 ; Align 1950615 994 807 utg47_pilon exonerate:protein2genome:local gene 1954167 1954364 159 - . gene_id 0 ; sequence GL50803_95788-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1954167 1954364 . - . utg47_pilon exonerate:protein2genome:local exon 1954167 1954364 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1954167 1954364 159 - . alignment_id 0 ; Query GL50803_95788-t26_1-p1 ; Align 1954365 1 198 utg47_pilon exonerate:protein2genome:local gene 1953648 1954667 1452 + . gene_id 0 ; sequence GL50803_95789-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1953648 1954667 . + . utg47_pilon exonerate:protein2genome:local exon 1953648 1954667 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1953648 1954667 1452 + . alignment_id 0 ; Query GL50803_95789-t26_1-p1 ; Align 1953648 1 1020 utg16500_pilon exonerate:protein2genome:local gene 49039 49518 348 - . gene_id 0 ; sequence GL50803_95847-t26_1-p1 ; gene_orientation . utg16500_pilon exonerate:protein2genome:local cds 49039 49518 . - . utg16500_pilon exonerate:protein2genome:local exon 49039 49518 . - . insertions 9 ; deletions 0 utg16500_pilon exonerate:protein2genome:local similarity 49039 49518 348 - . alignment_id 0 ; Query GL50803_95847-t26_1-p1 ; Align 49519 46 399 ; Align 49111 179 72 utg18_pilon exonerate:protein2genome:local gene 232874 233104 293 - . gene_id 0 ; sequence GL50803_95876-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 232874 233104 . - . utg18_pilon exonerate:protein2genome:local exon 232874 233104 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 232874 233104 293 - . alignment_id 0 ; Query GL50803_95876-t26_1-p1 ; Align 233105 1 231 utg18_pilon exonerate:protein2genome:local gene 231984 234011 2494 + . gene_id 0 ; sequence GL50803_95878-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 231984 234011 . + . utg18_pilon exonerate:protein2genome:local exon 231984 234011 . + . insertions 0 ; deletions 8 utg18_pilon exonerate:protein2genome:local similarity 231984 234011 2494 + . alignment_id 0 ; Query GL50803_95878-t26_1-p1 ; Align 231984 1 588 ; Align 232572 201 57 ; Align 232629 221 819 ; Align 233448 495 213 ; Align 233661 568 351 utg18_pilon exonerate:protein2genome:local gene 229217 230425 1748 - . gene_id 0 ; sequence GL50803_95880-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 229217 230425 . - . utg18_pilon exonerate:protein2genome:local exon 229217 230425 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 229217 230425 1748 - . alignment_id 0 ; Query GL50803_95880-t26_1-p1 ; Align 230426 1 1209 utg18_pilon exonerate:protein2genome:local gene 161663 219641 2122 - . gene_id 0 ; sequence GL50803_95895-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 217988 219641 . - . utg18_pilon exonerate:protein2genome:local exon 217988 219641 . - . insertions 0 ; deletions 1 utg18_pilon exonerate:protein2genome:local splice5 217986 217987 . - . intron_id 1 ; splice_site "TT" utg18_pilon exonerate:protein2genome:local intron 161752 217987 . - . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 161752 161753 . - . intron_id 0 ; splice_site "TG" utg18_pilon exonerate:protein2genome:local cds 161663 161751 . - . utg18_pilon exonerate:protein2genome:local exon 161663 161751 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 161663 219641 2122 - . alignment_id 0 ; Query GL50803_95895-t26_1-p1 ; Align 219642 1 489 ; Align 219153 165 1164 ; Align 161750 554 87 utg18_pilon exonerate:protein2genome:local gene 214365 216041 2391 - . gene_id 0 ; sequence GL50803_95898-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 214365 216041 . - . utg18_pilon exonerate:protein2genome:local exon 214365 216041 . - . insertions 0 ; deletions 1 utg18_pilon exonerate:protein2genome:local similarity 214365 216041 2391 - . alignment_id 0 ; Query GL50803_95898-t26_1-p1 ; Align 216042 1 129 ; Align 215913 45 1548 utg18_pilon exonerate:protein2genome:local gene 211803 213473 2361 + . gene_id 0 ; sequence GL50803_95904-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 211803 213473 . + . utg18_pilon exonerate:protein2genome:local exon 211803 213473 . + . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 211803 213473 2361 + . alignment_id 0 ; Query GL50803_95904-t26_1-p1 ; Align 211803 1 1377 ; Align 213180 462 294 utg18_pilon exonerate:protein2genome:local gene 200174 211656 15164 + . gene_id 0 ; sequence GL50803_95908-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 200174 211656 . + . utg18_pilon exonerate:protein2genome:local exon 200174 211656 . + . insertions 15 ; deletions 13 ; frameshifts 2 utg18_pilon exonerate:protein2genome:local similarity 200174 211656 15164 + . alignment_id 0 ; Query GL50803_95908-t26_1-p1 ; Align 200174 1 1344 ; Align 201518 450 1542 ; Align 203060 966 36 ; Align 203096 980 2007 ; Align 205103 1651 72 ; Align 205175 1679 1965 ; Align 207146 2334 1542 ; Align 208691 2848 84 ; Align 208776 2877 1062 ; Align 209841 3231 858 ; Align 210702 3517 621 ; Align 211324 3724 3 ; Align 211327 3726 330 utg18_pilon exonerate:protein2genome:local gene 191244 193235 2532 - . gene_id 0 ; sequence GL50803_95918-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 191244 193235 . - . utg18_pilon exonerate:protein2genome:local exon 191244 193235 . - . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 191244 193235 2532 - . alignment_id 0 ; Query GL50803_95918-t26_1-p1 ; Align 193236 5 684 ; Align 192552 235 1308 utg212_pilon exonerate:protein2genome:local gene 219251 222256 4232 - . gene_id 0 ; sequence GL50803_9593-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 219251 222256 . - . utg212_pilon exonerate:protein2genome:local exon 219251 222256 . - . insertions 3 ; deletions 2 utg212_pilon exonerate:protein2genome:local similarity 219251 222256 4232 - . alignment_id 0 ; Query GL50803_9593-t26_1-p1 ; Align 222257 1 624 ; Align 221633 210 1623 ; Align 220010 752 618 ; Align 219389 958 138 utg212_pilon exonerate:protein2genome:local gene 222307 223186 1283 + . gene_id 0 ; sequence GL50803_9594-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 222307 223186 . + . utg212_pilon exonerate:protein2genome:local exon 222307 223186 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg212_pilon exonerate:protein2genome:local similarity 222307 223186 1283 + . alignment_id 0 ; Query GL50803_9594-t26_1-p1 ; Align 222307 1 117 ; Align 222425 40 762 utg212_pilon exonerate:protein2genome:local gene 225667 225963 357 - . gene_id 0 ; sequence GL50803_9598-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 225667 225963 . - . utg212_pilon exonerate:protein2genome:local exon 225667 225963 . - . insertions 0 ; deletions 1 utg212_pilon exonerate:protein2genome:local similarity 225667 225963 357 - . alignment_id 0 ; Query GL50803_9598-t26_1-p1 ; Align 225964 1 168 ; Align 225796 58 129 utg18_pilon exonerate:protein2genome:local gene 382562 382816 196 + . gene_id 0 ; sequence GL50803_96006-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 382562 382816 . + . utg18_pilon exonerate:protein2genome:local exon 382562 382816 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 382562 382816 196 + . alignment_id 0 ; Query GL50803_96006-t26_1-p1 ; Align 382562 7 255 utg18_pilon exonerate:protein2genome:local gene 366572 370495 4463 + . gene_id 0 ; sequence GL50803_96018-t26_1-p1 ; gene_orientation + utg18_pilon exonerate:protein2genome:local cds 366572 369801 . + . utg18_pilon exonerate:protein2genome:local exon 366572 369801 . + . insertions 0 ; deletions 4 utg18_pilon exonerate:protein2genome:local splice5 369802 369803 . + . intron_id 1 ; splice_site "GT" utg18_pilon exonerate:protein2genome:local intron 369802 369837 . + . intron_id 1 utg18_pilon exonerate:protein2genome:local splice3 369836 369837 . + . intron_id 0 ; splice_site "AG" utg18_pilon exonerate:protein2genome:local cds 369838 370495 . + . utg18_pilon exonerate:protein2genome:local exon 369838 370495 . + . insertions 3 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 366572 370495 4463 + . alignment_id 0 ; Query GL50803_96018-t26_1-p1 ; Align 366572 1 1779 ; Align 368351 598 1449 ; Align 369839 1082 21 ; Align 369863 1089 633 utg18_pilon exonerate:protein2genome:local gene 341478 341756 259 - . gene_id 0 ; sequence GL50803_96041-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 341478 341756 . - . utg18_pilon exonerate:protein2genome:local exon 341478 341756 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 341478 341756 259 - . alignment_id 0 ; Query GL50803_96041-t26_1-p1 ; Align 341757 1 279 utg18_pilon exonerate:protein2genome:local gene 337530 337724 138 - . gene_id 0 ; sequence GL50803_96043-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 337530 337724 . - . utg18_pilon exonerate:protein2genome:local exon 337530 337724 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 337530 337724 138 - . alignment_id 0 ; Query GL50803_96043-t26_1-p1 ; Align 337725 1 195 utg64_pilon exonerate:protein2genome:local gene 211731 213632 2670 + . gene_id 0 ; sequence GL50803_9605-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 211731 213632 . + . utg64_pilon exonerate:protein2genome:local exon 211731 213632 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 211731 213632 2670 + . alignment_id 0 ; Query GL50803_9605-t26_1-p1 ; Align 211731 5 1299 ; Align 213033 438 600 utg64_pilon exonerate:protein2genome:local gene 766741 847587 466 - . gene_id 0 ; sequence GL50803_96055-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 847555 847587 . - . utg64_pilon exonerate:protein2genome:local exon 847555 847587 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 847553 847554 . - . intron_id 1 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 841877 847554 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 841877 841878 . - . intron_id 0 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 841666 841876 . - . utg64_pilon exonerate:protein2genome:local exon 841666 841876 . - . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 841664 841665 . - . intron_id 2 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 766884 841665 . - . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 766884 766885 . - . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 766741 766883 . - . utg64_pilon exonerate:protein2genome:local exon 766741 766883 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 766741 847587 466 - . alignment_id 0 ; Query GL50803_96055-t26_1-p1 ; Align 847588 1 33 ; Align 841877 12 171 ; Align 841703 69 36 ; Align 766882 82 141 utg349_pilon exonerate:protein2genome:local gene 608858 609472 917 - . gene_id 0 ; sequence GL50803_9611-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 608858 609472 . - . utg349_pilon exonerate:protein2genome:local exon 608858 609472 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 608858 609472 917 - . alignment_id 0 ; Query GL50803_9611-t26_1-p1 ; Align 609473 8 81 ; Align 609392 36 534 utg349_pilon exonerate:protein2genome:local gene 609511 610770 1468 - . gene_id 0 ; sequence GL50803_9612-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 609511 610770 . - . utg349_pilon exonerate:protein2genome:local exon 609511 610770 . - . insertions 0 ; deletions 3 utg349_pilon exonerate:protein2genome:local similarity 609511 610770 1468 - . alignment_id 0 ; Query GL50803_9612-t26_1-p1 ; Align 610771 1 813 ; Align 609958 273 228 ; Align 609730 351 219 utg349_pilon exonerate:protein2genome:local gene 614731 617274 3570 + . gene_id 0 ; sequence GL50803_9618-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 614731 617274 . + . utg349_pilon exonerate:protein2genome:local exon 614731 617274 . + . insertions 3 ; deletions 6 utg349_pilon exonerate:protein2genome:local similarity 614731 617274 3570 + . alignment_id 0 ; Query GL50803_9618-t26_1-p1 ; Align 614731 1 2067 ; Align 616798 692 219 ; Align 617017 766 12 ; Align 617029 773 210 ; Align 617242 843 33 utg349_pilon exonerate:protein2genome:local gene 620184 622625 3783 - . gene_id 0 ; sequence GL50803_9620-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 620184 622625 . - . utg349_pilon exonerate:protein2genome:local exon 620184 622625 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 620184 622625 3783 - . alignment_id 0 ; Query GL50803_9620-t26_1-p1 ; Align 622626 1 2442 utg349_pilon exonerate:protein2genome:local gene 623143 624198 1160 - . gene_id 0 ; sequence GL50803_9622-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 623143 624198 . - . utg349_pilon exonerate:protein2genome:local exon 623143 624198 . - . insertions 0 ; deletions 2 utg349_pilon exonerate:protein2genome:local similarity 623143 624198 1160 - . alignment_id 0 ; Query GL50803_9622-t26_1-p1 ; Align 624199 1 567 ; Align 623632 192 489 utg99_pilon exonerate:protein2genome:local gene 155475 155603 125 + . gene_id 0 ; sequence GL50803_96235-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 155475 155603 . + . utg99_pilon exonerate:protein2genome:local exon 155475 155603 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 155475 155603 125 + . alignment_id 0 ; Query GL50803_96235-t26_1-p1 ; Align 155475 42 129 utg11_pilon exonerate:protein2genome:local gene 1236125 1236940 1130 - . gene_id 0 ; sequence GL50803_96264-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1236125 1236940 . - . utg11_pilon exonerate:protein2genome:local exon 1236125 1236940 . - . insertions 0 ; deletions 1 utg11_pilon exonerate:protein2genome:local similarity 1236125 1236940 1130 - . alignment_id 0 ; Query GL50803_96264-t26_1-p1 ; Align 1236941 8 702 ; Align 1236239 243 114 utg11_pilon exonerate:protein2genome:local gene 1320412 1320672 246 + . gene_id 0 ; sequence GL50803_96284-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1320412 1320672 . + . utg11_pilon exonerate:protein2genome:local exon 1320412 1320672 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1320412 1320672 246 + . alignment_id 0 ; Query GL50803_96284-t26_1-p1 ; Align 1320412 1 261 utg11_pilon exonerate:protein2genome:local gene 1327498 1329171 1897 - . gene_id 0 ; sequence GL50803_96306-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1327498 1329171 . - . utg11_pilon exonerate:protein2genome:local exon 1327498 1329171 . - . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 1327498 1329171 1897 - . alignment_id 0 ; Query GL50803_96306-t26_1-p1 ; Align 1329172 1 699 ; Align 1328473 235 519 ; Align 1327954 409 456 utg11_pilon exonerate:protein2genome:local gene 1298262 1298405 142 + . gene_id 0 ; sequence GL50803_96308-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1298262 1298405 . + . utg11_pilon exonerate:protein2genome:local exon 1298262 1298405 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1298262 1298405 142 + . alignment_id 0 ; Query GL50803_96308-t26_1-p1 ; Align 1298262 3 144 utg11_pilon exonerate:protein2genome:local gene 1325708 1327465 2269 + . gene_id 0 ; sequence GL50803_96324-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1325708 1327465 . + . utg11_pilon exonerate:protein2genome:local exon 1325708 1327465 . + . insertions 15 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1325708 1327465 2269 + . alignment_id 0 ; Query GL50803_96324-t26_1-p1 ; Align 1325708 421 1425 ; Align 1327136 896 21 ; Align 1327169 903 297 utg11_pilon exonerate:protein2genome:local gene 1242251 1249915 9024 - . gene_id 0 ; sequence GL50803_96363-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1242251 1249915 . - . utg11_pilon exonerate:protein2genome:local exon 1242251 1249915 . - . insertions 69 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 1242251 1249915 9024 - . alignment_id 0 ; Query GL50803_96363-t26_1-p1 ; Align 1249916 3 279 ; Align 1249628 96 2595 ; Align 1247018 961 360 ; Align 1246655 1081 162 ; Align 1246493 1136 1263 ; Align 1245230 1558 777 ; Align 1244450 1817 21 ; Align 1244420 1824 111 ; Align 1244303 1861 363 ; Align 1243934 1982 795 ; Align 1243133 2247 342 ; Align 1242791 2362 201 ; Align 1242578 2429 69 ; Align 1242509 2453 258 utg11_pilon exonerate:protein2genome:local gene 1241034 1241621 766 - . gene_id 0 ; sequence GL50803_96364-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1241034 1241621 . - . utg11_pilon exonerate:protein2genome:local exon 1241034 1241621 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1241034 1241621 766 - . alignment_id 0 ; Query GL50803_96364-t26_1-p1 ; Align 1241622 2 588 utg64_pilon exonerate:protein2genome:local gene 291746 355943 499 - . gene_id 0 ; sequence GL50803_96370-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 355728 355943 . - . utg64_pilon exonerate:protein2genome:local exon 355728 355943 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 355726 355727 . - . intron_id 1 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local intron 292431 355727 . - . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 292431 292432 . - . intron_id 0 ; splice_site "AT" utg64_pilon exonerate:protein2genome:local cds 292284 292430 . - . utg64_pilon exonerate:protein2genome:local exon 292284 292430 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 292282 292283 . - . intron_id 2 ; splice_site "GA" utg64_pilon exonerate:protein2genome:local intron 291830 292283 . - . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 291830 291831 . - . intron_id 1 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local cds 291746 291829 . - . utg64_pilon exonerate:protein2genome:local exon 291746 291829 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 291746 355943 499 - . alignment_id 0 ; Query GL50803_96370-t26_1-p1 ; Align 355944 15 216 ; Align 292431 87 147 ; Align 291830 136 84 utg64_pilon exonerate:protein2genome:local gene 207580 429392 466 + . gene_id 0 ; sequence GL50803_96371-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 207580 207714 . + . utg64_pilon exonerate:protein2genome:local exon 207580 207714 . + . insertions 3 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 207715 207716 . + . intron_id 1 ; splice_site "GT" utg64_pilon exonerate:protein2genome:local intron 207715 370270 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 370269 370270 . + . intron_id 0 ; splice_site "TG" utg64_pilon exonerate:protein2genome:local cds 370271 370342 . + . utg64_pilon exonerate:protein2genome:local exon 370271 370342 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 370343 370344 . + . intron_id 2 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 370343 370394 . + . intron_id 2 utg64_pilon exonerate:protein2genome:local splice3 370393 370394 . + . intron_id 1 ; splice_site "AG" utg64_pilon exonerate:protein2genome:local cds 370395 370613 . + . utg64_pilon exonerate:protein2genome:local exon 370395 370613 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local splice5 370614 370615 . + . intron_id 3 ; splice_site "GA" utg64_pilon exonerate:protein2genome:local intron 370614 429198 . + . intron_id 3 utg64_pilon exonerate:protein2genome:local splice3 429197 429198 . + . intron_id 2 ; splice_site "GG" utg64_pilon exonerate:protein2genome:local cds 429199 429392 . + . utg64_pilon exonerate:protein2genome:local exon 429199 429392 . + . insertions 0 ; deletions 2 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 207580 429392 466 + . alignment_id 0 ; Query GL50803_96371-t26_1-p1 ; Align 207580 4 99 ; Align 207682 37 33 ; Align 370271 48 72 ; Align 370395 72 219 ; Align 429199 145 24 ; Align 429223 154 102 ; Align 429325 189 3 ; Align 429330 190 63 utg731_pilon exonerate:protein2genome:local gene 145270 150276 7114 + . gene_id 0 ; sequence GL50803_96399-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 145270 150276 . + . utg731_pilon exonerate:protein2genome:local exon 145270 150276 . + . insertions 3 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 145270 150276 7114 + . alignment_id 0 ; Query GL50803_96399-t26_1-p1 ; Align 145270 1 2013 ; Align 147283 674 1317 ; Align 148603 1113 1674 utg11_pilon exonerate:protein2genome:local gene 269610 269747 131 + . gene_id 0 ; sequence GL50803_9642-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 269610 269747 . + . utg11_pilon exonerate:protein2genome:local exon 269610 269747 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 269610 269747 131 + . alignment_id 0 ; Query GL50803_9642-t26_1-p1 ; Align 269610 1 138 utg731_pilon exonerate:protein2genome:local gene 117395 117643 298 - . gene_id 0 ; sequence GL50803_96421-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 117395 117643 . - . utg731_pilon exonerate:protein2genome:local exon 117395 117643 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 117395 117643 298 - . alignment_id 0 ; Query GL50803_96421-t26_1-p1 ; Align 117644 3 249 utg731_pilon exonerate:protein2genome:local gene 113583 113780 137 - . gene_id 0 ; sequence GL50803_96425-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 113583 113780 . - . utg731_pilon exonerate:protein2genome:local exon 113583 113780 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 113583 113780 137 - . alignment_id 0 ; Query GL50803_96425-t26_1-p1 ; Align 113781 4 198 utg47_pilon exonerate:protein2genome:local gene 366973 367374 411 - . gene_id 0 ; sequence GL50803_9644-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 366973 367374 . - . utg47_pilon exonerate:protein2genome:local exon 366973 367374 . - . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 366973 367374 411 - . alignment_id 0 ; Query GL50803_9644-t26_1-p1 ; Align 367375 1 255 ; Align 367120 90 147 utg731_pilon exonerate:protein2genome:local gene 58960 59334 325 + . gene_id 0 ; sequence GL50803_96455-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 58960 59334 . + . utg731_pilon exonerate:protein2genome:local exon 58960 59334 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 58960 59334 325 + . alignment_id 0 ; Query GL50803_96455-t26_1-p1 ; Align 58960 2 375 utg731_pilon exonerate:protein2genome:local gene 80080 80454 325 - . gene_id 0 ; sequence GL50803_96455-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 80080 80454 . - . utg731_pilon exonerate:protein2genome:local exon 80080 80454 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 80080 80454 325 - . alignment_id 0 ; Query GL50803_96455-t26_1-p1 ; Align 80455 2 375 utg11_pilon exonerate:protein2genome:local gene 164739 167645 4637 + . gene_id 0 ; sequence GL50803_96460-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 164739 167645 . + . utg11_pilon exonerate:protein2genome:local exon 164739 167645 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 164739 167645 4637 + . alignment_id 0 ; Query GL50803_96460-t26_1-p1 ; Align 164739 1 2907 utg265_pilon exonerate:protein2genome:local gene 560970 562805 2689 - . gene_id 0 ; sequence GL50803_96537-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 560970 562805 . - . utg265_pilon exonerate:protein2genome:local exon 560970 562805 . - . insertions 0 ; deletions 4 utg265_pilon exonerate:protein2genome:local similarity 560970 562805 2689 - . alignment_id 0 ; Query GL50803_96537-t26_1-p1 ; Align 562806 1 1086 ; Align 561720 367 750 utg265_pilon exonerate:protein2genome:local gene 607366 608691 1812 + . gene_id 0 ; sequence GL50803_96562-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 607366 608691 . + . utg265_pilon exonerate:protein2genome:local exon 607366 608691 . + . insertions 0 ; deletions 3 utg265_pilon exonerate:protein2genome:local similarity 607366 608691 1812 + . alignment_id 0 ; Query GL50803_96562-t26_1-p1 ; Align 607366 1 489 ; Align 607855 166 27 ; Align 607882 176 810 utg265_pilon exonerate:protein2genome:local gene 612995 613183 210 + . gene_id 0 ; sequence GL50803_96564-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 612995 613183 . + . utg265_pilon exonerate:protein2genome:local exon 612995 613183 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 612995 613183 210 + . alignment_id 0 ; Query GL50803_96564-t26_1-p1 ; Align 612995 1 189 utg265_pilon exonerate:protein2genome:local gene 617202 620397 4290 - . gene_id 0 ; sequence GL50803_96570-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 619266 620397 . - . utg265_pilon exonerate:protein2genome:local exon 619266 620397 . - . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 619264 619265 . - . intron_id 1 ; splice_site "TC" utg265_pilon exonerate:protein2genome:local intron 619221 619265 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 619221 619222 . - . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 617202 619220 . - . utg265_pilon exonerate:protein2genome:local exon 617202 619220 . - . insertions 3 ; deletions 5 ; frameshifts 1 utg265_pilon exonerate:protein2genome:local similarity 617202 620397 4290 - . alignment_id 0 ; Query GL50803_96570-t26_1-p1 ; Align 620398 575 1107 ; Align 619288 944 21 ; Align 619219 952 606 ; Align 618613 1157 42 ; Align 618571 1172 201 ; Align 618367 1239 141 ; Align 618226 1287 636 ; Align 617589 1499 387 utg265_pilon exonerate:protein2genome:local gene 902154 903062 1492 - . gene_id 0 ; sequence GL50803_9658-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 902154 903062 . - . utg265_pilon exonerate:protein2genome:local exon 902154 903062 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 902154 903062 1492 - . alignment_id 0 ; Query GL50803_9658-t26_1-p1 ; Align 903063 1 909 utg265_pilon exonerate:protein2genome:local gene 628274 629614 1779 + . gene_id 0 ; sequence GL50803_96580-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 628274 629614 . + . utg265_pilon exonerate:protein2genome:local exon 628274 629614 . + . insertions 0 ; deletions 7 utg265_pilon exonerate:protein2genome:local similarity 628274 629614 1779 + . alignment_id 0 ; Query GL50803_96580-t26_1-p1 ; Align 628274 1 618 ; Align 628892 208 21 ; Align 628913 218 57 ; Align 628970 240 645 utg265_pilon exonerate:protein2genome:local gene 900324 902111 2473 + . gene_id 0 ; sequence GL50803_9659-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 900324 902111 . + . utg265_pilon exonerate:protein2genome:local exon 900324 902111 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 900324 902111 2473 + . alignment_id 0 ; Query GL50803_9659-t26_1-p1 ; Align 900324 9 1788 utg99_pilon exonerate:protein2genome:local gene 246558 302288 7784 - . gene_id 0 ; sequence GL50803_96605-t26_1-p1 ; gene_orientation + utg99_pilon exonerate:protein2genome:local cds 302261 302288 . - . utg99_pilon exonerate:protein2genome:local exon 302261 302288 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 302259 302260 . - . intron_id 1 ; splice_site "GG" utg99_pilon exonerate:protein2genome:local intron 274050 302260 . - . intron_id 1 utg99_pilon exonerate:protein2genome:local splice3 274050 274051 . - . intron_id 0 ; splice_site "AG" utg99_pilon exonerate:protein2genome:local cds 273792 274049 . - . utg99_pilon exonerate:protein2genome:local exon 273792 274049 . - . insertions 3 ; deletions 0 utg99_pilon exonerate:protein2genome:local splice5 273790 273791 . - . intron_id 2 ; splice_site "GT" utg99_pilon exonerate:protein2genome:local intron 253019 273791 . - . intron_id 2 utg99_pilon exonerate:protein2genome:local splice3 253019 253020 . - . intron_id 1 ; splice_site "CG" utg99_pilon exonerate:protein2genome:local cds 246558 253018 . - . utg99_pilon exonerate:protein2genome:local exon 246558 253018 . - . insertions 15 ; deletions 7 utg99_pilon exonerate:protein2genome:local similarity 246558 302288 7784 - . alignment_id 0 ; Query GL50803_96605-t26_1-p1 ; Align 302289 958 27 ; Align 274048 968 129 ; Align 273916 1011 123 ; Align 253017 1053 1521 ; Align 251493 1560 1002 ; Align 250491 1898 210 ; Align 250281 1971 237 ; Align 250041 2050 3132 ; Align 246900 3094 342 utg99_pilon exonerate:protein2genome:local gene 240625 241629 1561 - . gene_id 0 ; sequence GL50803_96616-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 240625 241629 . - . utg99_pilon exonerate:protein2genome:local exon 240625 241629 . - . insertions 9 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 240625 241629 1561 - . alignment_id 0 ; Query GL50803_96616-t26_1-p1 ; Align 241630 1 660 ; Align 240961 221 336 utg265_pilon exonerate:protein2genome:local gene 899257 899433 314 - . gene_id 0 ; sequence GL50803_9662-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 899257 899433 . - . utg265_pilon exonerate:protein2genome:local exon 899257 899433 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 899257 899433 314 - . alignment_id 0 ; Query GL50803_9662-t26_1-p1 ; Align 899434 1 177 utg349_pilon exonerate:protein2genome:local gene 1500965 1501417 595 - . gene_id 0 ; sequence GL50803_96634-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1500965 1501417 . - . utg349_pilon exonerate:protein2genome:local exon 1500965 1501417 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1500965 1501417 595 - . alignment_id 0 ; Query GL50803_96634-t26_1-p1 ; Align 1501418 1 453 utg349_pilon exonerate:protein2genome:local gene 1499764 1499970 135 - . gene_id 0 ; sequence GL50803_96637-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1499764 1499970 . - . utg349_pilon exonerate:protein2genome:local exon 1499764 1499970 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1499764 1499970 135 - . alignment_id 0 ; Query GL50803_96637-t26_1-p1 ; Align 1499971 5 207 utg265_pilon exonerate:protein2genome:local gene 893511 894635 1355 - . gene_id 0 ; sequence GL50803_9665-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 893511 894635 . - . utg265_pilon exonerate:protein2genome:local exon 893511 894635 . - . insertions 0 ; deletions 2 utg265_pilon exonerate:protein2genome:local similarity 893511 894635 1355 - . alignment_id 0 ; Query GL50803_9665-t26_1-p1 ; Align 894636 2 279 ; Align 894357 96 120 ; Align 894237 137 726 utg349_pilon exonerate:protein2genome:local gene 1476992 1477297 330 + . gene_id 0 ; sequence GL50803_96656-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1476992 1477297 . + . utg349_pilon exonerate:protein2genome:local exon 1476992 1477297 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1476992 1477297 330 + . alignment_id 0 ; Query GL50803_96656-t26_1-p1 ; Align 1476992 1 306 utg265_pilon exonerate:protein2genome:local gene 893338 893490 159 - . gene_id 0 ; sequence GL50803_9666-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 893338 893490 . - . utg265_pilon exonerate:protein2genome:local exon 893338 893490 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 893338 893490 159 - . alignment_id 0 ; Query GL50803_9666-t26_1-p1 ; Align 893491 4 153 utg349_pilon exonerate:protein2genome:local gene 1504793 1508800 6255 + . gene_id 0 ; sequence GL50803_96670-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1504793 1508800 . + . utg349_pilon exonerate:protein2genome:local exon 1504793 1508800 . + . insertions 3 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1504793 1508800 6255 + . alignment_id 0 ; Query GL50803_96670-t26_1-p1 ; Align 1504793 1 3519 ; Align 1508315 1174 486 utg265_pilon exonerate:protein2genome:local gene 891873 892355 672 + . gene_id 0 ; sequence GL50803_9668-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 891873 892355 . + . utg265_pilon exonerate:protein2genome:local exon 891873 892355 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 891873 892355 672 + . alignment_id 0 ; Query GL50803_9668-t26_1-p1 ; Align 891873 1 483 utg11_pilon exonerate:protein2genome:local gene 416106 426314 14133 - . gene_id 0 ; sequence GL50803_96732-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 416106 426314 . - . utg11_pilon exonerate:protein2genome:local exon 416106 426314 . - . insertions 3 ; deletions 14 utg11_pilon exonerate:protein2genome:local similarity 416106 426314 14133 - . alignment_id 0 ; Query GL50803_96732-t26_1-p1 ; Align 426315 1 270 ; Align 426045 96 942 ; Align 425103 414 795 ; Align 424308 680 3390 ; Align 420918 1811 78 ; Align 420840 1838 294 ; Align 420546 1938 714 ; Align 419829 2176 3723 utg349_pilon exonerate:protein2genome:local gene 1610801 1611211 392 - . gene_id 0 ; sequence GL50803_96777-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1610801 1611211 . - . utg349_pilon exonerate:protein2genome:local exon 1610801 1611211 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1610801 1611211 392 - . alignment_id 0 ; Query GL50803_96777-t26_1-p1 ; Align 1611212 1 411 utg349_pilon exonerate:protein2genome:local gene 1609277 1610332 1073 + . gene_id 0 ; sequence GL50803_96779-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1609277 1609389 . + . utg349_pilon exonerate:protein2genome:local exon 1609277 1609389 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 1609390 1609391 . + . intron_id 1 ; splice_site "GA" utg349_pilon exonerate:protein2genome:local intron 1609390 1609425 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1609424 1609425 . + . intron_id 0 ; splice_site "AT" utg349_pilon exonerate:protein2genome:local cds 1609426 1610332 . + . utg349_pilon exonerate:protein2genome:local exon 1609426 1610332 . + . insertions 3 ; deletions 8 utg349_pilon exonerate:protein2genome:local similarity 1609277 1610332 1073 + . alignment_id 0 ; Query GL50803_96779-t26_1-p1 ; Align 1609277 3 111 ; Align 1609427 41 690 ; Align 1610117 275 117 ; Align 1610234 318 51 ; Align 1610288 335 45 utg349_pilon exonerate:protein2genome:local gene 1593641 1593937 282 + . gene_id 0 ; sequence GL50803_96808-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1593641 1593937 . + . utg349_pilon exonerate:protein2genome:local exon 1593641 1593937 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1593641 1593937 282 + . alignment_id 0 ; Query GL50803_96808-t26_1-p1 ; Align 1593641 1 297 utg349_pilon exonerate:protein2genome:local gene 1584776 1586233 2139 + . gene_id 0 ; sequence GL50803_96818-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1584776 1586233 . + . utg349_pilon exonerate:protein2genome:local exon 1584776 1586233 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 1584776 1586233 2139 + . alignment_id 0 ; Query GL50803_96818-t26_1-p1 ; Align 1584776 1 1197 ; Align 1585973 401 261 utg308_pilon exonerate:protein2genome:local gene 877200 877418 242 - . gene_id 0 ; sequence GL50803_96875-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 877200 877418 . - . utg308_pilon exonerate:protein2genome:local exon 877200 877418 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 877200 877418 242 - . alignment_id 0 ; Query GL50803_96875-t26_1-p1 ; Align 877419 1 219 utg308_pilon exonerate:protein2genome:local gene 875513 878509 4158 - . gene_id 0 ; sequence GL50803_96878-t26_1-p1 ; gene_orientation . utg308_pilon exonerate:protein2genome:local cds 875513 878509 . - . utg308_pilon exonerate:protein2genome:local exon 875513 878509 . - . insertions 0 ; deletions 0 utg308_pilon exonerate:protein2genome:local similarity 875513 878509 4158 - . alignment_id 0 ; Query GL50803_96878-t26_1-p1 ; Align 878510 1 2997 utg47_pilon exonerate:protein2genome:local gene 292337 292540 159 - . gene_id 0 ; sequence GL50803_96922-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 292337 292540 . - . utg47_pilon exonerate:protein2genome:local exon 292337 292540 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 292337 292540 159 - . alignment_id 0 ; Query GL50803_96922-t26_1-p1 ; Align 292541 1 204 utg18_pilon exonerate:protein2genome:local gene 98521 102660 5757 - . gene_id 0 ; sequence GL50803_9697-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 98521 102660 . - . utg18_pilon exonerate:protein2genome:local exon 98521 102660 . - . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 98521 102660 5757 - . alignment_id 0 ; Query GL50803_9697-t26_1-p1 ; Align 102661 1 738 ; Align 101923 249 3402 utg18_pilon exonerate:protein2genome:local gene 102749 103162 620 + . gene_id 0 ; sequence GL50803_9698-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 102749 103162 . + . utg18_pilon exonerate:protein2genome:local exon 102749 103162 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 102749 103162 620 + . alignment_id 0 ; Query GL50803_9698-t26_1-p1 ; Align 102749 1 414 utg731_pilon exonerate:protein2genome:local gene 991165 992085 1510 + . gene_id 0 ; sequence GL50803_96994-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 991165 992085 . + . utg731_pilon exonerate:protein2genome:local exon 991165 992085 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 991165 992085 1510 + . alignment_id 0 ; Query GL50803_96994-t26_1-p1 ; Align 991165 1 921 utg731_pilon exonerate:protein2genome:local gene 995283 995756 543 + . gene_id 0 ; sequence GL50803_96999-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 995283 995756 . + . utg731_pilon exonerate:protein2genome:local exon 995283 995756 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 995283 995756 543 + . alignment_id 0 ; Query GL50803_96999-t26_1-p1 ; Align 995283 1 474 utg731_pilon exonerate:protein2genome:local gene 1008354 1009001 767 - . gene_id 0 ; sequence GL50803_97017-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1008354 1009001 . - . utg731_pilon exonerate:protein2genome:local exon 1008354 1009001 . - . insertions 3 ; deletions 2 utg731_pilon exonerate:protein2genome:local similarity 1008354 1009001 767 - . alignment_id 0 ; Query GL50803_97017-t26_1-p1 ; Align 1009002 1 555 ; Align 1008444 186 45 ; Align 1008399 203 45 utg18_pilon exonerate:protein2genome:local gene 107556 108950 1250 - . gene_id 0 ; sequence GL50803_9703-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 107556 108950 . - . utg18_pilon exonerate:protein2genome:local exon 107556 108950 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 107556 108950 1250 - . alignment_id 0 ; Query GL50803_9703-t26_1-p1 ; Align 108951 1 1395 utg18_pilon exonerate:protein2genome:local gene 107319 109475 3508 + . gene_id 0 ; sequence GL50803_9704-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 107319 109475 . + . utg18_pilon exonerate:protein2genome:local exon 107319 109475 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 107319 109475 3508 + . alignment_id 0 ; Query GL50803_9704-t26_1-p1 ; Align 107319 1 2157 utg18_pilon exonerate:protein2genome:local gene 109547 110356 1281 - . gene_id 0 ; sequence GL50803_9705-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 109547 110356 . - . utg18_pilon exonerate:protein2genome:local exon 109547 110356 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 109547 110356 1281 - . alignment_id 0 ; Query GL50803_9705-t26_1-p1 ; Align 110357 1 810 utg18_pilon exonerate:protein2genome:local gene 528996 529235 252 + . gene_id 0 ; sequence GL50803_97052-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 528996 529235 . + . utg18_pilon exonerate:protein2genome:local exon 528996 529235 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 528996 529235 252 + . alignment_id 0 ; Query GL50803_97052-t26_1-p1 ; Align 528996 8 240 utg18_pilon exonerate:protein2genome:local gene 113931 114113 276 + . gene_id 0 ; sequence GL50803_9707-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 113931 114113 . + . utg18_pilon exonerate:protein2genome:local exon 113931 114113 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 113931 114113 276 + . alignment_id 0 ; Query GL50803_9707-t26_1-p1 ; Align 113931 1 183 utg18_pilon exonerate:protein2genome:local gene 500463 502799 2777 - . gene_id 0 ; sequence GL50803_97072-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 500463 502799 . - . utg18_pilon exonerate:protein2genome:local exon 500463 502799 . - . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 500463 502799 2777 - . alignment_id 0 ; Query GL50803_97072-t26_1-p1 ; Align 502800 1 273 ; Align 502527 94 2064 utg18_pilon exonerate:protein2genome:local gene 496516 497229 656 - . gene_id 0 ; sequence GL50803_97075-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 496516 497229 . - . utg18_pilon exonerate:protein2genome:local exon 496516 497229 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 496516 497229 656 - . alignment_id 0 ; Query GL50803_97075-t26_1-p1 ; Align 497230 1 714 utg18_pilon exonerate:protein2genome:local gene 474732 475013 208 - . gene_id 0 ; sequence GL50803_97093-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 474732 475013 . - . utg18_pilon exonerate:protein2genome:local exon 474732 475013 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 474732 475013 208 - . alignment_id 0 ; Query GL50803_97093-t26_1-p1 ; Align 475014 2 282 utg18_pilon exonerate:protein2genome:local gene 123006 123158 181 + . gene_id 0 ; sequence GL50803_9710-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 123006 123158 . + . utg18_pilon exonerate:protein2genome:local exon 123006 123158 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 123006 123158 181 + . alignment_id 0 ; Query GL50803_9710-t26_1-p1 ; Align 123006 1 153 utg18_pilon exonerate:protein2genome:local gene 538778 539296 544 - . gene_id 0 ; sequence GL50803_97112-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 538778 539296 . - . utg18_pilon exonerate:protein2genome:local exon 538778 539296 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 538778 539296 544 - . alignment_id 0 ; Query GL50803_97112-t26_1-p1 ; Align 539297 1 519 utg47_pilon exonerate:protein2genome:local gene 225394 227523 2564 - . gene_id 0 ; sequence GL50803_97130-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 226465 227523 . - . utg47_pilon exonerate:protein2genome:local exon 226465 227523 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 226463 226464 . - . intron_id 1 ; splice_site "GC" utg47_pilon exonerate:protein2genome:local intron 226420 226464 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 226420 226421 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 225394 226419 . - . utg47_pilon exonerate:protein2genome:local exon 225394 226419 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 225394 227523 2564 - . alignment_id 0 ; Query GL50803_97130-t26_1-p1 ; Align 227524 1 1059 ; Align 226420 354 1026 utg47_pilon exonerate:protein2genome:local gene 234683 234979 262 + . gene_id 0 ; sequence GL50803_97140-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 234683 234979 . + . utg47_pilon exonerate:protein2genome:local exon 234683 234979 . + . insertions 15 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 234683 234979 262 + . alignment_id 0 ; Query GL50803_97140-t26_1-p1 ; Align 234683 1 111 ; Align 234809 38 171 utg47_pilon exonerate:protein2genome:local gene 1423173 1423823 945 + . gene_id 0 ; sequence GL50803_9718-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1423173 1423823 . + . utg47_pilon exonerate:protein2genome:local exon 1423173 1423823 . + . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1423173 1423823 945 + . alignment_id 0 ; Query GL50803_9718-t26_1-p1 ; Align 1423173 6 633 ; Align 1423806 218 18 utg47_pilon exonerate:protein2genome:local gene 1423909 1425195 1926 + . gene_id 0 ; sequence GL50803_9719-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1423909 1425195 . + . utg47_pilon exonerate:protein2genome:local exon 1423909 1425195 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1423909 1425195 1926 + . alignment_id 0 ; Query GL50803_9719-t26_1-p1 ; Align 1423909 1 1287 utg47_pilon exonerate:protein2genome:local gene 1425227 1428358 3943 - . gene_id 0 ; sequence GL50803_9720-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 1426874 1428358 . - . utg47_pilon exonerate:protein2genome:local exon 1426874 1428358 . - . insertions 15 ; deletions 1 utg47_pilon exonerate:protein2genome:local splice5 1426872 1426873 . - . intron_id 1 ; splice_site "CA" utg47_pilon exonerate:protein2genome:local intron 1426823 1426873 . - . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 1426823 1426824 . - . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 1425227 1426822 . - . utg47_pilon exonerate:protein2genome:local exon 1425227 1426822 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1425227 1428358 3943 - . alignment_id 0 ; Query GL50803_9720-t26_1-p1 ; Align 1428359 1 567 ; Align 1427792 191 243 ; Align 1427537 272 372 ; Align 1427162 396 288 ; Align 1426823 492 1596 utg47_pilon exonerate:protein2genome:local gene 146943 147308 221 - . gene_id 0 ; sequence GL50803_97204-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 146943 147308 . - . utg47_pilon exonerate:protein2genome:local exon 146943 147308 . - . insertions 0 ; deletions 4 utg47_pilon exonerate:protein2genome:local similarity 146943 147308 221 - . alignment_id 0 ; Query GL50803_97204-t26_1-p1 ; Align 147309 3 90 ; Align 147219 34 81 ; Align 147138 64 195 utg47_pilon exonerate:protein2genome:local gene 163965 164944 1653 + . gene_id 0 ; sequence GL50803_97219-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 163965 164944 . + . utg47_pilon exonerate:protein2genome:local exon 163965 164944 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 163965 164944 1653 + . alignment_id 0 ; Query GL50803_97219-t26_1-p1 ; Align 163965 1 528 ; Align 164495 178 450 utg47_pilon exonerate:protein2genome:local gene 1434279 1435613 1523 - . gene_id 0 ; sequence GL50803_9722-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1434279 1435613 . - . utg47_pilon exonerate:protein2genome:local exon 1434279 1435613 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1434279 1435613 1523 - . alignment_id 0 ; Query GL50803_9722-t26_1-p1 ; Align 1435614 1 1335 utg212_pilon exonerate:protein2genome:local gene 14297 115880 357 + . gene_id 0 ; sequence GL50803_97233-t26_1-p1 ; gene_orientation + utg212_pilon exonerate:protein2genome:local cds 14297 14426 . + . utg212_pilon exonerate:protein2genome:local exon 14297 14426 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local splice5 14427 14428 . + . intron_id 1 ; splice_site "AC" utg212_pilon exonerate:protein2genome:local intron 14427 115722 . + . intron_id 1 utg212_pilon exonerate:protein2genome:local splice3 115721 115722 . + . intron_id 0 ; splice_site "AG" utg212_pilon exonerate:protein2genome:local cds 115723 115880 . + . utg212_pilon exonerate:protein2genome:local exon 115723 115880 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 14297 115880 357 + . alignment_id 0 ; Query GL50803_97233-t26_1-p1 ; Align 14297 1 129 ; Align 115725 45 156 utg265_pilon exonerate:protein2genome:local gene 556508 590654 357 + . gene_id 0 ; sequence GL50803_97233-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 556508 556627 . + . utg265_pilon exonerate:protein2genome:local exon 556508 556627 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 556628 556629 . + . intron_id 1 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 556628 590486 . + . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 590485 590486 . + . intron_id 0 ; splice_site "AG" utg265_pilon exonerate:protein2genome:local cds 590487 590654 . + . utg265_pilon exonerate:protein2genome:local exon 590487 590654 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 556508 590654 357 + . alignment_id 0 ; Query GL50803_97233-t26_1-p1 ; Align 556508 1 120 ; Align 590487 41 168 utg212_pilon exonerate:protein2genome:local gene 431459 433799 3388 - . gene_id 0 ; sequence GL50803_9741-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 431459 433799 . - . utg212_pilon exonerate:protein2genome:local exon 431459 433799 . - . insertions 0 ; deletions 2 ; frameshifts 4 utg212_pilon exonerate:protein2genome:local similarity 431459 433799 3388 - . alignment_id 0 ; Query GL50803_9741-t26_1-p1 ; Align 433800 1 1737 ; Align 432061 581 336 ; Align 431723 694 264 utg212_pilon exonerate:protein2genome:local gene 425532 426719 1637 - . gene_id 0 ; sequence GL50803_9746-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 425532 426719 . - . utg212_pilon exonerate:protein2genome:local exon 425532 426719 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 425532 426719 1637 - . alignment_id 0 ; Query GL50803_9746-t26_1-p1 ; Align 426720 1 1188 utg212_pilon exonerate:protein2genome:local gene 422690 424395 2577 + . gene_id 0 ; sequence GL50803_9750-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 422690 424395 . + . utg212_pilon exonerate:protein2genome:local exon 422690 424395 . + . insertions 0 ; deletions 0 ; frameshifts 2 utg212_pilon exonerate:protein2genome:local similarity 422690 424395 2577 + . alignment_id 0 ; Query GL50803_9750-t26_1-p1 ; Align 422690 1 63 ; Align 422754 22 288 ; Align 423043 118 1353 utg212_pilon exonerate:protein2genome:local gene 421617 422657 1538 - . gene_id 0 ; sequence GL50803_9751-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 421617 422657 . - . utg212_pilon exonerate:protein2genome:local exon 421617 422657 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 421617 422657 1538 - . alignment_id 0 ; Query GL50803_9751-t26_1-p1 ; Align 422658 1 1041 utg212_pilon exonerate:protein2genome:local gene 417049 421568 4809 + . gene_id 0 ; sequence GL50803_9752-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 417049 421568 . + . utg212_pilon exonerate:protein2genome:local exon 417049 421568 . + . insertions 3 ; deletions 2 ; frameshifts 5 utg212_pilon exonerate:protein2genome:local similarity 417049 421568 4809 + . alignment_id 0 ; Query GL50803_9752-t26_1-p1 ; Align 417049 3 66 ; Align 417116 25 393 ; Align 417510 156 402 ; Align 417914 290 3 ; Align 417917 292 1011 ; Align 418931 629 537 ; Align 419469 808 1797 ; Align 421266 1408 303 utg212_pilon exonerate:protein2genome:local gene 414447 415079 934 - . gene_id 0 ; sequence GL50803_9755-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 414447 415079 . - . utg212_pilon exonerate:protein2genome:local exon 414447 415079 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 414447 415079 934 - . alignment_id 0 ; Query GL50803_9755-t26_1-p1 ; Align 415080 1 633 utg349_pilon exonerate:protein2genome:local gene 44652 146719 411 - . gene_id 0 ; sequence GL50803_97627-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 146655 146719 . - . utg349_pilon exonerate:protein2genome:local exon 146655 146719 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local splice5 146653 146654 . - . intron_id 1 ; splice_site "GT" utg349_pilon exonerate:protein2genome:local intron 45016 146654 . - . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 45016 45017 . - . intron_id 0 ; splice_site "CG" utg349_pilon exonerate:protein2genome:local cds 44652 45015 . - . utg349_pilon exonerate:protein2genome:local exon 44652 45015 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 44652 146719 411 - . alignment_id 0 ; Query GL50803_97627-t26_1-p1 ; Align 146720 1 63 ; Align 45015 23 363 utg349_pilon exonerate:protein2genome:local gene 1576803 1577435 903 + . gene_id 0 ; sequence GL50803_97741-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1576803 1577435 . + . utg349_pilon exonerate:protein2genome:local exon 1576803 1577435 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1576803 1577435 903 + . alignment_id 0 ; Query GL50803_97741-t26_1-p1 ; Align 1576803 1 633 utg212_pilon exonerate:protein2genome:local gene 220344 220445 119 + . gene_id 0 ; sequence GL50803_97765-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 220344 220445 . + . utg212_pilon exonerate:protein2genome:local exon 220344 220445 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 220344 220445 119 + . alignment_id 0 ; Query GL50803_97765-t26_1-p1 ; Align 220344 1 102 utg18_pilon exonerate:protein2genome:local gene 528798 529385 995 - . gene_id 0 ; sequence GL50803_9778-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 528798 529385 . - . utg18_pilon exonerate:protein2genome:local exon 528798 529385 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 528798 529385 995 - . alignment_id 0 ; Query GL50803_9778-t26_1-p1 ; Align 529386 1 588 utg18_pilon exonerate:protein2genome:local gene 527766 528695 1563 - . gene_id 0 ; sequence GL50803_9779-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 527766 528695 . - . utg18_pilon exonerate:protein2genome:local exon 527766 528695 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 527766 528695 1563 - . alignment_id 0 ; Query GL50803_9779-t26_1-p1 ; Align 528696 1 930 utg18_pilon exonerate:protein2genome:local gene 526986 527726 1021 - . gene_id 0 ; sequence GL50803_9780-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 526986 527726 . - . utg18_pilon exonerate:protein2genome:local exon 526986 527726 . - . insertions 0 ; deletions 2 utg18_pilon exonerate:protein2genome:local similarity 526986 527726 1021 - . alignment_id 0 ; Query GL50803_9780-t26_1-p1 ; Align 527727 1 714 ; Align 527013 241 27 utg18_pilon exonerate:protein2genome:local gene 526205 526969 1140 + . gene_id 0 ; sequence GL50803_9782-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 526205 526969 . + . utg18_pilon exonerate:protein2genome:local exon 526205 526969 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 526205 526969 1140 + . alignment_id 0 ; Query GL50803_9782-t26_1-p1 ; Align 526205 1 765 utg47_pilon exonerate:protein2genome:local gene 1699424 1699729 353 - . gene_id 0 ; sequence GL50803_97820-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1699424 1699729 . - . utg47_pilon exonerate:protein2genome:local exon 1699424 1699729 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1699424 1699729 353 - . alignment_id 0 ; Query GL50803_97820-t26_1-p1 ; Align 1699730 2 255 ; Align 1699472 87 48 utg47_pilon exonerate:protein2genome:local gene 1697314 1697619 353 - . gene_id 0 ; sequence GL50803_97820-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1697314 1697619 . - . utg47_pilon exonerate:protein2genome:local exon 1697314 1697619 . - . insertions 3 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1697314 1697619 353 - . alignment_id 0 ; Query GL50803_97820-t26_1-p1 ; Align 1697620 2 255 ; Align 1697362 87 48 utg99_pilon exonerate:protein2genome:local gene 389036 389170 149 + . gene_id 0 ; sequence GL50803_97824-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 389036 389170 . + . utg99_pilon exonerate:protein2genome:local exon 389036 389170 . + . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 389036 389170 149 + . alignment_id 0 ; Query GL50803_97824-t26_1-p1 ; Align 389036 22 135 utg18_pilon exonerate:protein2genome:local gene 523649 523765 140 + . gene_id 0 ; sequence GL50803_9787-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 523649 523765 . + . utg18_pilon exonerate:protein2genome:local exon 523649 523765 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 523649 523765 140 + . alignment_id 0 ; Query GL50803_9787-t26_1-p1 ; Align 523649 2 117 utg18_pilon exonerate:protein2genome:local gene 523627 524919 1557 - . gene_id 0 ; sequence GL50803_9788-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 523627 524919 . - . utg18_pilon exonerate:protein2genome:local exon 523627 524919 . - . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 523627 524919 1557 - . alignment_id 0 ; Query GL50803_9788-t26_1-p1 ; Align 524920 1 1293 utg47_pilon exonerate:protein2genome:local gene 885531 885878 295 + . gene_id 0 ; sequence GL50803_9800-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 885531 885878 . + . utg47_pilon exonerate:protein2genome:local exon 885531 885878 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 885531 885878 295 + . alignment_id 0 ; Query GL50803_9800-t26_1-p1 ; Align 885531 1 348 utg47_pilon exonerate:protein2genome:local gene 886086 886643 794 + . gene_id 0 ; sequence GL50803_9802-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 886086 886643 . + . utg47_pilon exonerate:protein2genome:local exon 886086 886643 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 886086 886643 794 + . alignment_id 0 ; Query GL50803_9802-t26_1-p1 ; Align 886086 1 558 utg47_pilon exonerate:protein2genome:local gene 886736 887775 1581 - . gene_id 0 ; sequence GL50803_9803-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 886736 887775 . - . utg47_pilon exonerate:protein2genome:local exon 886736 887775 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg47_pilon exonerate:protein2genome:local similarity 886736 887775 1581 - . alignment_id 0 ; Query GL50803_9803-t26_1-p1 ; Align 887776 1 459 ; Align 887315 155 579 utg99_pilon exonerate:protein2genome:local gene 156141 156623 494 - . gene_id 0 ; sequence GL50803_98050-t26_1-p1 ; gene_orientation . utg99_pilon exonerate:protein2genome:local cds 156141 156623 . - . utg99_pilon exonerate:protein2genome:local exon 156141 156623 . - . insertions 0 ; deletions 0 utg99_pilon exonerate:protein2genome:local similarity 156141 156623 494 - . alignment_id 0 ; Query GL50803_98050-t26_1-p1 ; Align 156624 2 483 utg47_pilon exonerate:protein2genome:local gene 1761866 1762952 1827 + . gene_id 0 ; sequence GL50803_98054-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1761866 1762952 . + . utg47_pilon exonerate:protein2genome:local exon 1761866 1762952 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1761866 1762952 1827 + . alignment_id 0 ; Query GL50803_98054-t26_1-p1 ; Align 1761866 1 1047 ; Align 1762914 350 39 utg212_pilon exonerate:protein2genome:local gene 437568 438059 842 - . gene_id 0 ; sequence GL50803_98056-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 437568 438059 . - . utg212_pilon exonerate:protein2genome:local exon 437568 438059 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 437568 438059 842 - . alignment_id 0 ; Query GL50803_98056-t26_1-p1 ; Align 438060 1 492 utg47_pilon exonerate:protein2genome:local gene 1699424 1699681 345 - . gene_id 0 ; sequence GL50803_98058-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1699424 1699681 . - . utg47_pilon exonerate:protein2genome:local exon 1699424 1699681 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1699424 1699681 345 - . alignment_id 0 ; Query GL50803_98058-t26_1-p1 ; Align 1699682 2 258 utg47_pilon exonerate:protein2genome:local gene 1697314 1697571 345 - . gene_id 0 ; sequence GL50803_98058-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1697314 1697571 . - . utg47_pilon exonerate:protein2genome:local exon 1697314 1697571 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1697314 1697571 345 - . alignment_id 0 ; Query GL50803_98058-t26_1-p1 ; Align 1697572 2 258 utg47_pilon exonerate:protein2genome:local gene 891733 997536 4154 + . gene_id 0 ; sequence GL50803_9807-t26_1-p1 ; gene_orientation + utg47_pilon exonerate:protein2genome:local cds 891733 892663 . + . utg47_pilon exonerate:protein2genome:local exon 891733 892663 . + . insertions 6 ; deletions 0 utg47_pilon exonerate:protein2genome:local splice5 892664 892665 . + . intron_id 1 ; splice_site "CA" utg47_pilon exonerate:protein2genome:local intron 892664 892708 . + . intron_id 1 utg47_pilon exonerate:protein2genome:local splice3 892707 892708 . + . intron_id 0 ; splice_site "AG" utg47_pilon exonerate:protein2genome:local cds 892709 895549 . + . utg47_pilon exonerate:protein2genome:local exon 892709 895549 . + . insertions 0 ; deletions 1 ; frameshifts 3 utg47_pilon exonerate:protein2genome:local splice5 895550 895551 . + . intron_id 2 ; splice_site "GT" utg47_pilon exonerate:protein2genome:local intron 895550 997522 . + . intron_id 2 utg47_pilon exonerate:protein2genome:local splice3 997521 997522 . + . intron_id 1 ; splice_site "AA" utg47_pilon exonerate:protein2genome:local cds 997523 997536 . + . utg47_pilon exonerate:protein2genome:local exon 997523 997536 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 891733 997536 4154 + . alignment_id 0 ; Query GL50803_9807-t26_1-p1 ; Align 891733 144 42 ; Align 891781 158 882 ; Align 892711 453 723 ; Align 893434 695 3 ; Align 893439 696 1485 ; Align 894925 1191 624 ; Align 997525 1400 12 utg47_pilon exonerate:protein2genome:local gene 895607 896830 2002 - . gene_id 0 ; sequence GL50803_9808-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 895607 896830 . - . utg47_pilon exonerate:protein2genome:local exon 895607 896830 . - . insertions 0 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 895607 896830 2002 - . alignment_id 0 ; Query GL50803_9808-t26_1-p1 ; Align 896831 1 1200 ; Align 895631 402 24 utg47_pilon exonerate:protein2genome:local gene 896944 897261 544 - . gene_id 0 ; sequence GL50803_9810-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 896944 897261 . - . utg47_pilon exonerate:protein2genome:local exon 896944 897261 . - . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 896944 897261 544 - . alignment_id 0 ; Query GL50803_9810-t26_1-p1 ; Align 897262 1 318 utg731_pilon exonerate:protein2genome:local gene 1238729 1238980 240 + . gene_id 0 ; sequence GL50803_98178-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 1238729 1238980 . + . utg731_pilon exonerate:protein2genome:local exon 1238729 1238980 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 1238729 1238980 240 + . alignment_id 0 ; Query GL50803_98178-t26_1-p1 ; Align 1238729 2 252 utg47_pilon exonerate:protein2genome:local gene 1247754 1248038 148 + . gene_id 0 ; sequence GL50803_98218-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1247754 1248038 . + . utg47_pilon exonerate:protein2genome:local exon 1247754 1248038 . + . insertions 15 ; deletions 1 utg47_pilon exonerate:protein2genome:local similarity 1247754 1248038 148 + . alignment_id 0 ; Query GL50803_98218-t26_1-p1 ; Align 1247754 24 84 ; Align 1247850 52 60 ; Align 1247910 73 24 ; Align 1247937 81 102 utg64_pilon exonerate:protein2genome:local gene 19522 19677 164 + . gene_id 0 ; sequence GL50803_98220-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 19522 19677 . + . utg64_pilon exonerate:protein2genome:local exon 19522 19677 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 19522 19677 164 + . alignment_id 0 ; Query GL50803_98220-t26_1-p1 ; Align 19522 103 156 utg265_pilon exonerate:protein2genome:local gene 240785 240931 100 + . gene_id 0 ; sequence GL50803_98226-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 240785 240931 . + . utg265_pilon exonerate:protein2genome:local exon 240785 240931 . + . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 240785 240931 100 + . alignment_id 0 ; Query GL50803_98226-t26_1-p1 ; Align 240785 62 69 ; Align 240857 85 75 utg265_pilon exonerate:protein2genome:local gene 337588 337734 100 - . gene_id 0 ; sequence GL50803_98226-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 337588 337734 . - . utg265_pilon exonerate:protein2genome:local exon 337588 337734 . - . insertions 3 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 337588 337734 100 - . alignment_id 0 ; Query GL50803_98226-t26_1-p1 ; Align 337735 62 69 ; Align 337663 85 75 utg349_pilon exonerate:protein2genome:local gene 770033 770980 1177 - . gene_id 0 ; sequence GL50803_9823-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 770033 770980 . - . utg349_pilon exonerate:protein2genome:local exon 770033 770980 . - . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local similarity 770033 770980 1177 - . alignment_id 0 ; Query GL50803_9823-t26_1-p1 ; Align 770981 1 342 ; Align 770639 116 606 utg349_pilon exonerate:protein2genome:local gene 769351 770013 1063 + . gene_id 0 ; sequence GL50803_9824-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 769351 770013 . + . utg349_pilon exonerate:protein2genome:local exon 769351 770013 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 769351 770013 1063 + . alignment_id 0 ; Query GL50803_9824-t26_1-p1 ; Align 769351 1 663 utg349_pilon exonerate:protein2genome:local gene 767864 769267 2274 + . gene_id 0 ; sequence GL50803_9825-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 767864 769267 . + . utg349_pilon exonerate:protein2genome:local exon 767864 769267 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 767864 769267 2274 + . alignment_id 0 ; Query GL50803_9825-t26_1-p1 ; Align 767864 1 1404 utg212_pilon exonerate:protein2genome:local gene 198282 198395 130 + . gene_id 0 ; sequence GL50803_98250-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 198282 198395 . + . utg212_pilon exonerate:protein2genome:local exon 198282 198395 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 198282 198395 130 + . alignment_id 0 ; Query GL50803_98250-t26_1-p1 ; Align 198282 1 114 utg349_pilon exonerate:protein2genome:local gene 767424 767681 273 - . gene_id 0 ; sequence GL50803_9826-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 767424 767681 . - . utg349_pilon exonerate:protein2genome:local exon 767424 767681 . - . insertions 0 ; deletions 4 utg349_pilon exonerate:protein2genome:local similarity 767424 767681 273 - . alignment_id 0 ; Query GL50803_9826-t26_1-p1 ; Align 767682 1 117 ; Align 767565 44 141 utg349_pilon exonerate:protein2genome:local gene 766345 767286 1584 - . gene_id 0 ; sequence GL50803_9827-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 766345 767286 . - . utg349_pilon exonerate:protein2genome:local exon 766345 767286 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 766345 767286 1584 - . alignment_id 0 ; Query GL50803_9827-t26_1-p1 ; Align 767287 1 942 utg349_pilon exonerate:protein2genome:local gene 765660 766280 787 - . gene_id 0 ; sequence GL50803_9829-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 765660 766280 . - . utg349_pilon exonerate:protein2genome:local exon 765660 766280 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 765660 766280 787 - . alignment_id 0 ; Query GL50803_9829-t26_1-p1 ; Align 766281 3 621 utg11_pilon exonerate:protein2genome:local gene 1454329 1454496 204 + . gene_id 0 ; sequence GL50803_98310-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1454329 1454496 . + . utg11_pilon exonerate:protein2genome:local exon 1454329 1454496 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1454329 1454496 204 + . alignment_id 0 ; Query GL50803_98310-t26_1-p1 ; Align 1454329 30 168 utg349_pilon exonerate:protein2genome:local gene 760718 761680 1411 + . gene_id 0 ; sequence GL50803_9834-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 760718 761680 . + . utg349_pilon exonerate:protein2genome:local exon 760718 761680 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 760718 761680 1411 + . alignment_id 0 ; Query GL50803_9834-t26_1-p1 ; Align 760718 1 963 utg349_pilon exonerate:protein2genome:local gene 759399 760577 1531 - . gene_id 0 ; sequence GL50803_9835-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 759399 760577 . - . utg349_pilon exonerate:protein2genome:local exon 759399 760577 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 759399 760577 1531 - . alignment_id 0 ; Query GL50803_9835-t26_1-p1 ; Align 760578 1 1179 utg18_pilon exonerate:protein2genome:local gene 544365 544550 132 + . gene_id 0 ; sequence GL50803_98366-t26_1-p1 ; gene_orientation . utg18_pilon exonerate:protein2genome:local cds 544365 544550 . + . utg18_pilon exonerate:protein2genome:local exon 544365 544550 . + . insertions 0 ; deletions 0 utg18_pilon exonerate:protein2genome:local similarity 544365 544550 132 + . alignment_id 0 ; Query GL50803_98366-t26_1-p1 ; Align 544365 1 186 utg64_pilon exonerate:protein2genome:local gene 79966 80070 109 + . gene_id 0 ; sequence GL50803_98375-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 79966 80070 . + . utg64_pilon exonerate:protein2genome:local exon 79966 80070 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 79966 80070 109 + . alignment_id 0 ; Query GL50803_98375-t26_1-p1 ; Align 79966 7 105 utg731_pilon exonerate:protein2genome:local gene 332453 332557 109 + . gene_id 0 ; sequence GL50803_98375-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 332453 332557 . + . utg731_pilon exonerate:protein2genome:local exon 332453 332557 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 332453 332557 109 + . alignment_id 0 ; Query GL50803_98375-t26_1-p1 ; Align 332453 7 105 utg731_pilon exonerate:protein2genome:local gene 339135 339239 109 - . gene_id 0 ; sequence GL50803_98375-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 339135 339239 . - . utg731_pilon exonerate:protein2genome:local exon 339135 339239 . - . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 339135 339239 109 - . alignment_id 0 ; Query GL50803_98375-t26_1-p1 ; Align 339240 7 105 utg212_pilon exonerate:protein2genome:local gene 220041 220151 129 + . gene_id 0 ; sequence GL50803_98451-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 220041 220151 . + . utg212_pilon exonerate:protein2genome:local exon 220041 220151 . + . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 220041 220151 129 + . alignment_id 0 ; Query GL50803_98451-t26_1-p1 ; Align 220041 1 111 utg64_pilon exonerate:protein2genome:local gene 804278 805375 1254 - . gene_id 0 ; sequence GL50803_9846-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 804278 805375 . - . utg64_pilon exonerate:protein2genome:local exon 804278 805375 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 804278 805375 1254 - . alignment_id 0 ; Query GL50803_9846-t26_1-p1 ; Align 805376 1 1098 utg64_pilon exonerate:protein2genome:local gene 805400 806080 824 + . gene_id 0 ; sequence GL50803_9847-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 805400 806080 . + . utg64_pilon exonerate:protein2genome:local exon 805400 806080 . + . insertions 0 ; deletions 1 ; frameshifts 3 utg64_pilon exonerate:protein2genome:local similarity 805400 806080 824 + . alignment_id 0 ; Query GL50803_9847-t26_1-p1 ; Align 805400 1 279 ; Align 805681 95 216 ; Align 805898 167 183 utg64_pilon exonerate:protein2genome:local gene 806175 806441 473 + . gene_id 0 ; sequence GL50803_9848-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 806175 806441 . + . utg64_pilon exonerate:protein2genome:local exon 806175 806441 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 806175 806441 473 + . alignment_id 0 ; Query GL50803_9848-t26_1-p1 ; Align 806175 1 267 utg64_pilon exonerate:protein2genome:local gene 806127 806378 370 - . gene_id 0 ; sequence GL50803_9849-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 806127 806378 . - . utg64_pilon exonerate:protein2genome:local exon 806127 806378 . - . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 806127 806378 370 - . alignment_id 0 ; Query GL50803_9849-t26_1-p1 ; Align 806379 1 252 utg64_pilon exonerate:protein2genome:local gene 806450 807357 1220 - . gene_id 0 ; sequence GL50803_9850-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 806450 807357 . - . utg64_pilon exonerate:protein2genome:local exon 806450 807357 . - . insertions 0 ; deletions 1 ; frameshifts 2 utg64_pilon exonerate:protein2genome:local similarity 806450 807357 1220 - . alignment_id 0 ; Query GL50803_9850-t26_1-p1 ; Align 807358 1 468 ; Align 806888 158 438 utg64_pilon exonerate:protein2genome:local gene 807451 807660 254 + . gene_id 0 ; sequence GL50803_9851-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 807451 807660 . + . utg64_pilon exonerate:protein2genome:local exon 807451 807660 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 807451 807660 254 + . alignment_id 0 ; Query GL50803_9851-t26_1-p1 ; Align 807451 1 210 utg64_pilon exonerate:protein2genome:local gene 816476 817027 556 + . gene_id 0 ; sequence GL50803_9857-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 816476 817027 . + . utg64_pilon exonerate:protein2genome:local exon 816476 817027 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 816476 817027 556 + . alignment_id 0 ; Query GL50803_9857-t26_1-p1 ; Align 816476 1 552 utg349_pilon exonerate:protein2genome:local gene 1540818 1540910 135 + . gene_id 0 ; sequence GL50803_98572-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1540818 1540910 . + . utg349_pilon exonerate:protein2genome:local exon 1540818 1540910 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1540818 1540910 135 + . alignment_id 0 ; Query GL50803_98572-t26_1-p1 ; Align 1540818 1 93 utg64_pilon exonerate:protein2genome:local gene 817089 818726 1662 + . gene_id 0 ; sequence GL50803_9858-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 817089 818726 . + . utg64_pilon exonerate:protein2genome:local exon 817089 818726 . + . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 817089 818726 1662 + . alignment_id 0 ; Query GL50803_9858-t26_1-p1 ; Align 817089 22 1428 ; Align 818517 500 210 utg64_pilon exonerate:protein2genome:local gene 818752 819783 1090 - . gene_id 0 ; sequence GL50803_9859-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 818752 819783 . - . utg64_pilon exonerate:protein2genome:local exon 818752 819783 . - . insertions 0 ; deletions 2 utg64_pilon exonerate:protein2genome:local similarity 818752 819783 1090 - . alignment_id 0 ; Query GL50803_9859-t26_1-p1 ; Align 819784 1 822 ; Align 818962 277 210 utg11_pilon exonerate:protein2genome:local gene 646888 647019 119 + . gene_id 0 ; sequence GL50803_98607-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 646888 647019 . + . utg11_pilon exonerate:protein2genome:local exon 646888 647019 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 646888 647019 119 + . alignment_id 0 ; Query GL50803_98607-t26_1-p1 ; Align 646888 57 132 utg265_pilon exonerate:protein2genome:local gene 696298 696501 119 - . gene_id 0 ; sequence GL50803_98607-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 696298 696501 . - . utg265_pilon exonerate:protein2genome:local exon 696298 696501 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 696298 696501 119 - . alignment_id 0 ; Query GL50803_98607-t26_1-p1 ; Align 696502 23 204 utg64_pilon exonerate:protein2genome:local gene 821404 860967 1341 + . gene_id 0 ; sequence GL50803_9861-t26_1-p1 ; gene_orientation + utg64_pilon exonerate:protein2genome:local cds 821404 822279 . + . utg64_pilon exonerate:protein2genome:local exon 821404 822279 . + . insertions 0 ; deletions 1 utg64_pilon exonerate:protein2genome:local splice5 822280 822281 . + . intron_id 1 ; splice_site "GC" utg64_pilon exonerate:protein2genome:local intron 822280 860691 . + . intron_id 1 utg64_pilon exonerate:protein2genome:local splice3 860690 860691 . + . intron_id 0 ; splice_site "AC" utg64_pilon exonerate:protein2genome:local cds 860692 860967 . + . utg64_pilon exonerate:protein2genome:local exon 860692 860967 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 821404 860967 1341 + . alignment_id 0 ; Query GL50803_9861-t26_1-p1 ; Align 821404 1 735 ; Align 822139 247 141 ; Align 860692 294 276 utg11_pilon exonerate:protein2genome:local gene 918244 921651 4514 - . gene_id 0 ; sequence GL50803_9865-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 918244 921651 . - . utg11_pilon exonerate:protein2genome:local exon 918244 921651 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 918244 921651 4514 - . alignment_id 0 ; Query GL50803_9865-t26_1-p1 ; Align 921652 1 2106 ; Align 919543 703 1299 utg265_pilon exonerate:protein2genome:local gene 99245 99373 105 + . gene_id 0 ; sequence GL50803_98653-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 99245 99373 . + . utg265_pilon exonerate:protein2genome:local exon 99245 99373 . + . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 99245 99373 105 + . alignment_id 0 ; Query GL50803_98653-t26_1-p1 ; Align 99245 1 129 utg349_pilon exonerate:protein2genome:local gene 1520018 1520146 105 + . gene_id 0 ; sequence GL50803_98653-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1520018 1520146 . + . utg349_pilon exonerate:protein2genome:local exon 1520018 1520146 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1520018 1520146 105 + . alignment_id 0 ; Query GL50803_98653-t26_1-p1 ; Align 1520018 1 129 utg349_pilon exonerate:protein2genome:local gene 1529233 1529361 105 - . gene_id 0 ; sequence GL50803_98653-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1529233 1529361 . - . utg349_pilon exonerate:protein2genome:local exon 1529233 1529361 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1529233 1529361 105 - . alignment_id 0 ; Query GL50803_98653-t26_1-p1 ; Align 1529362 1 129 utg265_pilon exonerate:protein2genome:local gene 716722 872602 2192 - . gene_id 0 ; sequence GL50803_9870-t26_1-p1 ; gene_orientation + utg265_pilon exonerate:protein2genome:local cds 870944 872602 . - . utg265_pilon exonerate:protein2genome:local exon 870944 872602 . - . insertions 27 ; deletions 4 utg265_pilon exonerate:protein2genome:local splice5 870942 870943 . - . intron_id 1 ; splice_site "GA" utg265_pilon exonerate:protein2genome:local intron 870503 870943 . - . intron_id 1 utg265_pilon exonerate:protein2genome:local splice3 870503 870504 . - . intron_id 0 ; splice_site "AC" utg265_pilon exonerate:protein2genome:local cds 869907 870502 . - . utg265_pilon exonerate:protein2genome:local exon 869907 870502 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local splice5 869905 869906 . - . intron_id 2 ; splice_site "GT" utg265_pilon exonerate:protein2genome:local intron 716972 869906 . - . intron_id 2 utg265_pilon exonerate:protein2genome:local splice3 716972 716973 . - . intron_id 1 ; splice_site "AT" utg265_pilon exonerate:protein2genome:local cds 716722 716971 . - . utg265_pilon exonerate:protein2genome:local exon 716722 716971 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 716722 872602 2192 - . alignment_id 0 ; Query GL50803_9870-t26_1-p1 ; Align 872603 11 417 ; Align 872171 150 567 ; Align 871598 339 9 ; Align 871586 342 69 ; Align 871517 369 483 ; Align 871031 530 87 ; Align 870503 559 594 ; Align 716971 758 249 utg349_pilon exonerate:protein2genome:local gene 1114126 1114293 118 - . gene_id 0 ; sequence GL50803_98799-t26_1-p1 ; gene_orientation . utg349_pilon exonerate:protein2genome:local cds 1114126 1114293 . - . utg349_pilon exonerate:protein2genome:local exon 1114126 1114293 . - . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1114126 1114293 118 - . alignment_id 0 ; Query GL50803_98799-t26_1-p1 ; Align 1114294 21 168 utg47_pilon exonerate:protein2genome:local gene 826232 826511 214 + . gene_id 0 ; sequence GL50803_98861-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 826232 826511 . + . utg47_pilon exonerate:protein2genome:local exon 826232 826511 . + . insertions 0 ; deletions 1 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 826232 826511 214 + . alignment_id 0 ; Query GL50803_98861-t26_1-p1 ; Align 826232 2 21 ; Align 826253 10 153 ; Align 826407 61 105 utg11_pilon exonerate:protein2genome:local gene 134168 136843 4346 - . gene_id 0 ; sequence GL50803_9894-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 134168 136843 . - . utg11_pilon exonerate:protein2genome:local exon 134168 136843 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 134168 136843 4346 - . alignment_id 0 ; Query GL50803_9894-t26_1-p1 ; Align 136844 1 2676 utg11_pilon exonerate:protein2genome:local gene 137014 137394 582 - . gene_id 0 ; sequence GL50803_9896-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 137014 137394 . - . utg11_pilon exonerate:protein2genome:local exon 137014 137394 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 137014 137394 582 - . alignment_id 0 ; Query GL50803_9896-t26_1-p1 ; Align 137395 1 381 utg11_pilon exonerate:protein2genome:local gene 1806364 1806645 247 - . gene_id 0 ; sequence GL50803_98985-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1806364 1806645 . - . utg11_pilon exonerate:protein2genome:local exon 1806364 1806645 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1806364 1806645 247 - . alignment_id 0 ; Query GL50803_98985-t26_1-p1 ; Align 1806646 14 282 utg64_pilon exonerate:protein2genome:local gene 998665 998943 247 + . gene_id 0 ; sequence GL50803_98985-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 998665 998943 . + . utg64_pilon exonerate:protein2genome:local exon 998665 998943 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 998665 998943 247 + . alignment_id 0 ; Query GL50803_98985-t26_1-p1 ; Align 998665 15 279 utg47_pilon exonerate:protein2genome:local gene 1763000 1763161 111 + . gene_id 0 ; sequence GL50803_98987-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1763000 1763161 . + . utg47_pilon exonerate:protein2genome:local exon 1763000 1763161 . + . insertions 0 ; deletions 0 utg47_pilon exonerate:protein2genome:local similarity 1763000 1763161 111 + . alignment_id 0 ; Query GL50803_98987-t26_1-p1 ; Align 1763000 32 162 utg11_pilon exonerate:protein2genome:local gene 137950 139533 2401 + . gene_id 0 ; sequence GL50803_9899-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 137950 139533 . + . utg11_pilon exonerate:protein2genome:local exon 137950 139533 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 137950 139533 2401 + . alignment_id 0 ; Query GL50803_9899-t26_1-p1 ; Align 137950 1 1584 utg11_pilon exonerate:protein2genome:local gene 139559 140425 1348 - . gene_id 0 ; sequence GL50803_9900-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 139559 140425 . - . utg11_pilon exonerate:protein2genome:local exon 139559 140425 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 139559 140425 1348 - . alignment_id 0 ; Query GL50803_9900-t26_1-p1 ; Align 140426 1 867 utg64_pilon exonerate:protein2genome:local gene 493224 493484 348 + . gene_id 0 ; sequence GL50803_99071-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 493224 493484 . + . utg64_pilon exonerate:protein2genome:local exon 493224 493484 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 493224 493484 348 + . alignment_id 0 ; Query GL50803_99071-t26_1-p1 ; Align 493224 1 261 utg11_pilon exonerate:protein2genome:local gene 746920 747030 132 + . gene_id 0 ; sequence GL50803_99087-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 746920 747030 . + . utg11_pilon exonerate:protein2genome:local exon 746920 747030 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 746920 747030 132 + . alignment_id 0 ; Query GL50803_99087-t26_1-p1 ; Align 746920 4 111 utg11_pilon exonerate:protein2genome:local gene 145103 147754 4426 + . gene_id 0 ; sequence GL50803_9909-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 145103 147754 . + . utg11_pilon exonerate:protein2genome:local exon 145103 147754 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 145103 147754 4426 + . alignment_id 0 ; Query GL50803_9909-t26_1-p1 ; Align 145103 1 2652 utg11_pilon exonerate:protein2genome:local gene 147801 150890 4258 - . gene_id 0 ; sequence GL50803_9912-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 147801 150890 . - . utg11_pilon exonerate:protein2genome:local exon 147801 150890 . - . insertions 3 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 147801 150890 4258 - . alignment_id 0 ; Query GL50803_9912-t26_1-p1 ; Align 150891 1 2502 ; Align 148386 835 585 utg11_pilon exonerate:protein2genome:local gene 150930 152279 2298 + . gene_id 0 ; sequence GL50803_9913-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 150930 152279 . + . utg11_pilon exonerate:protein2genome:local exon 150930 152279 . + . insertions 0 ; deletions 2 utg11_pilon exonerate:protein2genome:local similarity 150930 152279 2298 + . alignment_id 0 ; Query GL50803_9913-t26_1-p1 ; Align 150930 1 738 ; Align 151668 249 612 utg11_pilon exonerate:protein2genome:local gene 153875 154513 1056 + . gene_id 0 ; sequence GL50803_9916-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 153875 154513 . + . utg11_pilon exonerate:protein2genome:local exon 153875 154513 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 153875 154513 1056 + . alignment_id 0 ; Query GL50803_9916-t26_1-p1 ; Align 153875 1 639 utg11_pilon exonerate:protein2genome:local gene 158392 160506 2517 + . gene_id 0 ; sequence GL50803_9922-t26_1-p1 ; gene_orientation + utg11_pilon exonerate:protein2genome:local cds 158392 160201 . + . utg11_pilon exonerate:protein2genome:local exon 158392 160201 . + . insertions 3 ; deletions 7 utg11_pilon exonerate:protein2genome:local splice5 160202 160203 . + . intron_id 1 ; splice_site "GA" utg11_pilon exonerate:protein2genome:local intron 160202 160231 . + . intron_id 1 utg11_pilon exonerate:protein2genome:local splice3 160230 160231 . + . intron_id 0 ; splice_site "AG" utg11_pilon exonerate:protein2genome:local cds 160232 160506 . + . utg11_pilon exonerate:protein2genome:local exon 160232 160506 . + . insertions 0 ; deletions 4 utg11_pilon exonerate:protein2genome:local similarity 158392 160506 2517 + . alignment_id 0 ; Query GL50803_9922-t26_1-p1 ; Align 158392 1 1137 ; Align 159529 384 27 ; Align 159556 396 411 ; Align 159970 533 231 ; Align 160234 611 21 ; Align 160255 621 192 ; Align 160447 686 60 utg11_pilon exonerate:protein2genome:local gene 1182269 1182406 144 - . gene_id 0 ; sequence GL50803_99322-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1182269 1182406 . - . utg11_pilon exonerate:protein2genome:local exon 1182269 1182406 . - . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1182269 1182406 144 - . alignment_id 0 ; Query GL50803_99322-t26_1-p1 ; Align 1182407 1 138 utg265_pilon exonerate:protein2genome:local gene 653461 653634 193 - . gene_id 0 ; sequence GL50803_99377-t26_1-p1 ; gene_orientation . utg265_pilon exonerate:protein2genome:local cds 653461 653634 . - . utg265_pilon exonerate:protein2genome:local exon 653461 653634 . - . insertions 0 ; deletions 0 utg265_pilon exonerate:protein2genome:local similarity 653461 653634 193 - . alignment_id 0 ; Query GL50803_99377-t26_1-p1 ; Align 653635 1 174 utg47_pilon exonerate:protein2genome:local gene 1761785 1761908 135 + . gene_id 0 ; sequence GL50803_99411-t26_1-p1 ; gene_orientation . utg47_pilon exonerate:protein2genome:local cds 1761785 1761908 . + . utg47_pilon exonerate:protein2genome:local exon 1761785 1761908 . + . insertions 0 ; deletions 0 ; frameshifts 1 utg47_pilon exonerate:protein2genome:local similarity 1761785 1761908 135 + . alignment_id 0 ; Query GL50803_99411-t26_1-p1 ; Align 1761785 29 39 ; Align 1761825 42 84 utg11_pilon exonerate:protein2genome:local gene 1333282 1335776 3316 + . gene_id 0 ; sequence GL50803_9948-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1333282 1335776 . + . utg11_pilon exonerate:protein2genome:local exon 1333282 1335776 . + . insertions 0 ; deletions 1 ; frameshifts 2 utg11_pilon exonerate:protein2genome:local similarity 1333282 1335776 3316 + . alignment_id 0 ; Query GL50803_9948-t26_1-p1 ; Align 1333282 15 2286 ; Align 1335568 778 3 ; Align 1335573 779 204 utg11_pilon exonerate:protein2genome:local gene 1358730 1359428 930 + . gene_id 0 ; sequence GL50803_9952-t26_1-p1 ; gene_orientation . utg11_pilon exonerate:protein2genome:local cds 1358730 1359428 . + . utg11_pilon exonerate:protein2genome:local exon 1358730 1359428 . + . insertions 0 ; deletions 0 utg11_pilon exonerate:protein2genome:local similarity 1358730 1359428 930 + . alignment_id 0 ; Query GL50803_9952-t26_1-p1 ; Align 1358730 1 699 utg64_pilon exonerate:protein2genome:local gene 941870 942016 146 + . gene_id 0 ; sequence GL50803_99557-t26_1-p1 ; gene_orientation . utg64_pilon exonerate:protein2genome:local cds 941870 942016 . + . utg64_pilon exonerate:protein2genome:local exon 941870 942016 . + . insertions 0 ; deletions 0 utg64_pilon exonerate:protein2genome:local similarity 941870 942016 146 + . alignment_id 0 ; Query GL50803_99557-t26_1-p1 ; Align 941870 1 147 utg731_pilon exonerate:protein2genome:local gene 393366 393719 295 + . gene_id 0 ; sequence GL50803_99639-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 393366 393719 . + . utg731_pilon exonerate:protein2genome:local exon 393366 393719 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 393366 393719 295 + . alignment_id 0 ; Query GL50803_99639-t26_1-p1 ; Align 393366 1 354 utg212_pilon exonerate:protein2genome:local gene 566999 567181 197 - . gene_id 0 ; sequence GL50803_99709-t26_1-p1 ; gene_orientation . utg212_pilon exonerate:protein2genome:local cds 566999 567181 . - . utg212_pilon exonerate:protein2genome:local exon 566999 567181 . - . insertions 0 ; deletions 0 utg212_pilon exonerate:protein2genome:local similarity 566999 567181 197 - . alignment_id 0 ; Query GL50803_99709-t26_1-p1 ; Align 567182 1 183 utg731_pilon exonerate:protein2genome:local gene 793577 793675 102 + . gene_id 0 ; sequence GL50803_9973-t26_1-p1 ; gene_orientation . utg731_pilon exonerate:protein2genome:local cds 793577 793675 . + . utg731_pilon exonerate:protein2genome:local exon 793577 793675 . + . insertions 0 ; deletions 0 utg731_pilon exonerate:protein2genome:local similarity 793577 793675 102 + . alignment_id 0 ; Query GL50803_9973-t26_1-p1 ; Align 793577 1 99 utg349_pilon exonerate:protein2genome:local gene 1103724 1224558 447 + . gene_id 0 ; sequence GL50803_99743-t26_1-p1 ; gene_orientation + utg349_pilon exonerate:protein2genome:local cds 1103724 1103938 . + . utg349_pilon exonerate:protein2genome:local exon 1103724 1103938 . + . insertions 0 ; deletions 1 utg349_pilon exonerate:protein2genome:local splice5 1103939 1103940 . + . intron_id 1 ; splice_site "GG" utg349_pilon exonerate:protein2genome:local intron 1103939 1224398 . + . intron_id 1 utg349_pilon exonerate:protein2genome:local splice3 1224397 1224398 . + . intron_id 0 ; splice_site "AG" utg349_pilon exonerate:protein2genome:local cds 1224399 1224558 . + . utg349_pilon exonerate:protein2genome:local exon 1224399 1224558 . + . insertions 0 ; deletions 0 utg349_pilon exonerate:protein2genome:local similarity 1103724 1224558 447 + . alignment_id 0 ; Query GL50803_99743-t26_1-p1 ; Align 1103724 2 18 ; Align 1103742 9 195 ; Align 1224400 75 159