Information for 12-CACTGGAGGCTG (Motif 13)


Reverse Opposite:

p-value:1e-20
log p-value:-4.630e+01
Information Content per bp:1.700
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif3.44%
Number of Background Sequences with motif459.7
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets412.5 +/- 366.1bp
Average Position of motif in Background191.5 +/- 147.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0154.2_EBF1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACTGGAGGCTG
TCCCTGGGGAN--

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CACTGGAGGCTG
AATCGCACTGCATTCCG

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CACTGGAGGCTG
ATAACCACTTGAAAATT

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CACTGGAGGCTG
RSCACTYRAG----

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CACTGGAGGCTG
CAATCACTGGCAGAAT

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CACTGGAGGCTG-
-----TWGTCTGV

PH0171.1_Nkx2-1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CACTGGAGGCTG
TAAGCCACTTGAAATT-

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CACTGGAGGCTG
CACAGCAGGGGG

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CACTGGAGGCTG
-------NGCTN

POL002.1_INR/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CACTGGAGGCTG-
-----NNNANTGA