Information for 15-GCCAGTGTAG (Motif 15)


Reverse Opposite:

p-value:1e-17
log p-value:-3.951e+01
Information Content per bp:1.795
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif2.76%
Number of Background Sequences with motif355.4
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets368.2 +/- 375.5bp
Average Position of motif in Background184.2 +/- 144.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCCAGTGTAG--
CNNNGCTACTGTANNN

MA0032.1_FOXC1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCCAGTGTAG
-GGTAAGTA-

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGTGTAG-
GGGAATTGTAGT

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCCAGTGTAG--
TNNTGCTACTGTNNNN

MA0161.1_NFIC/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGTGTAG
TGCCAA-----

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GCCAGTGTAG-
NNNNTGCCAGTGATTG

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCCAGTGTAG
AAGGCAAGTGT--

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GCCAGTGTAG-
-----NGAAGC

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCCAGTGTAG-------
NNNANTGCAGTGCNNTT

MA0143.3_Sox2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GCCAGTGTAG
-CCTTTGTT-