Information for 17-ATCGTTTACG (Motif 20)


Reverse Opposite:

p-value:1e-12
log p-value:-2.790e+01
Information Content per bp:1.657
Number of Target Sequences with motif281.0
Percentage of Target Sequences with motif9.12%
Number of Background Sequences with motif2253.1
Percentage of Background Sequences with motif5.89%
Average Position of motif in Targets380.9 +/- 319.0bp
Average Position of motif in Background193.2 +/- 128.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0030.1_FOXF2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ATCGTTTACG----
NTTGTTTACGTTNN

MA0031.1_FOXD1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATCGTTTACG
-ATGTTTAC-

PH0044.1_Homez/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----ATCGTTTACG--
AAAACATCGTTTTTAAG

PB0017.1_Foxj3_1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ATCGTTTACG----
NNNTTTGTTTACNTTNN

PB0018.1_Foxk1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATCGTTTACG----
NNNTTTGTTTACATTTN

PH0066.1_Hoxc11/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATCGTTTACG------
NNNTTTTACGACNTTN

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATCGTTTACG----
NNNTTTGTTTACTTTTN

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATCGTTTACG-
NYYTGTTTACHN

MA0040.1_Foxq1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATCGTTTACG
TATTGTTTATT

PH0065.1_Hoxc10/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATCGTTTACG------
ANNTTTTACGACNTNN