Information for 21-GTCACATCTAAT (Motif 24)


Reverse Opposite:

p-value:1e-9
log p-value:-2.220e+01
Information Content per bp:1.883
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets123.5 +/- 94.6bp
Average Position of motif in Background176.9 +/- 41.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0009.1_T/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTCACATCTAAT
TTCACACCTAG-

MA0132.1_Pdx1/Jaspar

Match Rank:2
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GTCACATCTAAT-
-------CTAATT

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTCACATCTAAT
KTTCACACCT---

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCACATCTAAT---
AATATACATGTAATATA

PH0094.1_Lhx4/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTCACATCTAAT-------
--CAAAGCTAATTAGNTTN

PB0013.1_Eomes_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTCACATCTAAT-
NNTTTTCACACCTTNNN

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCACATCTAAT---
AAAATACATGTAATACT

PH0131.1_Pax4/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTCACATCTAAT--------
---TGAACTAATTAGCCCAC

PH0098.1_Lhx8/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTCACATCTAAT-------
--CACCGCTAATTAGNNGN

PH0085.1_Irx4/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCACATCTAAT---
AATATACATGTAAAACA