Information for 19-CGGCTTCAGT (Motif 27)


Reverse Opposite:

p-value:1e-7
log p-value:-1.687e+01
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets196.5 +/- 179.3bp
Average Position of motif in Background183.6 +/- 118.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGGCTTCAGT
--GCTTCC--

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGGCTTCAGT
TGGTTTCAGT

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTTCAGT----
CNNNGCTACTGTANNN

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTTCAGT----
TNNTGCTACTGTNNNN

POL002.1_INR/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGGCTTCAGT---
-----TCAGTCTT

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTTCAGT----
NTGGTTTCGGTTNNN

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTTCAGT---
TNTGGTTTCGATACN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTTCAGT------
NNNANTGCAGTGCNNTT

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGCTTCAGT
-NGCTN----

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGGCTTCAGT----
CAGTTTCGNTTCTN