Information for 25-CTGGAGACACAC (Motif 28)


Reverse Opposite:

p-value:1e-5
log p-value:-1.210e+01
Information Content per bp:1.970
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets150.6 +/- 112.8bp
Average Position of motif in Background188.4 +/- 72.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTGGAGACACAC------
--AGCGGCACACACGCAA

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTGGAGACACAC-
CTACTTGGATACGGAAT

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGGAGACACAC-
-AGGTGHCAGACA

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTGGAGACACAC----
----GGCCACACCCAN

MA0157.1_FOXO3/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGGAGACACAC
-TGTAAACA---

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGGAGACACAC--
-AGGTGNCAGACAG

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTGGAGACACAC
--CCAGACRSVB

MA0154.2_EBF1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTGGAGACACAC
TCCCTGGGGAN----

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTGGAGACACAC
--CCAGACAG--

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTGGAGACACAC-
NNNVCTGWGYAAACASN