Information for 3-NCAGTTCAGCAN (Motif 3)


Reverse Opposite:

p-value:1e-38
log p-value:-8.888e+01
Information Content per bp:1.450
Number of Target Sequences with motif841.0
Percentage of Target Sequences with motif27.31%
Number of Background Sequences with motif6796.7
Percentage of Background Sequences with motif17.76%
Average Position of motif in Targets396.2 +/- 375.9bp
Average Position of motif in Background183.7 +/- 142.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:NCAGTTCAGCAN----
-HWWGTCAGCAWWTTT

MA0496.1_MAFK/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:NCAGTTCAGCAN---
CTGAGTCAGCAATTT

PB0041.1_Mafb_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-NCAGTTCAGCAN----
NCTANGTCAGCAAATTT

MA0495.1_MAFF/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-NCAGTTCAGCAN-----
GCTGAGTCAGCAATTTTT

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:NCAGTTCAGCAN
-TGAGTCAGCA-

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:NCAGTTCAGCAN-----
--AAGTCAGCANTTTTN

MA0512.1_Rxra/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-NCAGTTCAGCAN
CAAAGGTCAGA--

MA0117.1_Mafb/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:NCAGTTCAGCAN
--NCGTCAGC--

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-NCAGTTCAGCAN
CAAAGGTCAG---

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:NCAGTTCAGCAN
------CAGCC-