Information for 3-TGGAATGTGC (Motif 4)


Reverse Opposite:

p-value:1e-38
log p-value:-8.844e+01
Information Content per bp:1.531
Number of Target Sequences with motif605.0
Percentage of Target Sequences with motif19.64%
Number of Background Sequences with motif4399.2
Percentage of Background Sequences with motif11.49%
Average Position of motif in Targets386.8 +/- 346.7bp
Average Position of motif in Background184.8 +/- 135.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0090.1_TEAD1/Jaspar

Match Rank:1
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---TGGAATGTGC
CNGAGGAATGTG-

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--TGGAATGTGC
CCWGGAATGY--

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TGGAATGTGC
NCTGGAATGC--

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TGGAATGTGC
CCWGGAATGY--

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TGGAATGTGC--
TATTATGGGATGGATAA

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TGGAATGTGC-----
NNTTCTGGAANNTTCTAGAA

MA0058.2_MAX/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGGAATGTGC--
--CCATGTGCTT

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGGAATGTGC
--RTACGTGC

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGGAATGTGC
GGGTACGTGC

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGGAATGTGC
AATGGAAAAT--