Information for 5-CTRTTCAYACWG (Motif 8)


Reverse Opposite:

p-value:1e-35
log p-value:-8.101e+01
Information Content per bp:1.810
Number of Target Sequences with motif1166.0
Percentage of Target Sequences with motif37.86%
Number of Background Sequences with motif10523.3
Percentage of Background Sequences with motif27.49%
Average Position of motif in Targets394.8 +/- 368.4bp
Average Position of motif in Background184.8 +/- 134.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.49
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTRTTCAYACWG----
NSTGTTTRCWCAGBNNN

MA0047.2_Foxa2/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTRTTCAYACWG-
-TGTTTACTTAGG

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTRTTCAYACWG
CNTGTTTACATA-

MA0148.3_FOXA1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTRTTCAYACWG
TCCATGTTTACTTTG

MA0480.1_Foxo1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTRTTCAYACWG
TCCTGTTTACA---

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CTRTTCAYACWG
NNNNNNCTTTTATAN--

MA0108.2_TBP/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CTRTTCAYACWG
NNNNNNCTTTTATAN--

PB0109.1_Bbx_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTRTTCAYACWG-
NNNNCTGTTAACNNTNN

MA0593.1_FOXP2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTRTTCAYACWG
TNTGTTTACTT--

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTRTTCAYACWG
CTGTTTAC----