Information for 9-ATGGCATGCC (Motif 9)


Reverse Opposite:

p-value:1e-31
log p-value:-7.239e+01
Information Content per bp:1.532
Number of Target Sequences with motif760.0
Percentage of Target Sequences with motif24.68%
Number of Background Sequences with motif6266.9
Percentage of Background Sequences with motif16.37%
Average Position of motif in Targets381.5 +/- 372.3bp
Average Position of motif in Background186.0 +/- 141.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ATGGCATGCC---
TATTATGGGATGGATAA

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATGGCATGCC
CCWGGAATGY-

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATGGCATGCC
NCTGGAATGC-

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------ATGGCATGCC
NGTAGGTTGGCATNNN

MA0161.1_NFIC/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATGGCATGCC
TTGGCA----

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGGCATGCC
CCWGGAATGY-

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATGGCATGCC-
-TTGCGTGCVA

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATGGCATGCC---
CAAAGGCGTGGCCAG

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATGGCATGCC
CTTGGCAA---

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATGGCATGCC
ATGGGGTGAT