Genome_Name NCBI_ID Environment Oxygen_Tolerance Pathogenicity Latitude Longitude Abiotrophia_defectiva_ATCC_49176 592010 Human, Oral (Other) NA NA NA NA Acaryochloris_marina_MBIC11017 329726 Non-Human, Marine (Other) Aerobe Non-Pathogen -7.532264 131.361112 Acetobacter_pasteurianus_IFO_3283_01 634452 Non-Human Aerobe NA 35.18 136.906389 Acetobacter_pasteurianus_IFO_3283_01_42C 634458 Non-Human Aerobe NA 35.18 136.906 Acetobacter_pasteurianus_IFO_3283_03 634453 Non-Human Aerobe NA 35.18 136.906 Acetobacter_pasteurianus_IFO_3283_07 634454 Non-Human Aerobe NA 35.18 136.906 Acetobacter_pasteurianus_IFO_3283_12 634459 Non-Human Aerobe NA 35.18 136.906 Acetobacter_pasteurianus_IFO_3283_22 634455 Non-Human Aerobe NA 35.18 136.906 Acetobacter_pasteurianus_IFO_3283_26 634456 Non-Human Aerobe NA 35.18 136.906 Acetobacter_pasteurianus_IFO_3283_32 634457 Non-Human Aerobe NA 35.18 136.906 Acholeplasma_laidlawii_PG_8A 441768 Non-Human, Soil Facultative NA NA NA Achromobacter_piechaudii_ATCC_43553 742159 Human, Airways (Other) NA NA NA NA Acidaminococcus_fermentans_DSM_20731 591001 Non-Human, Farm Anaerobe NA NA NA Acidimicrobium_ferrooxidans_DSM_10331 525909 Non-Human Aerobe NA 63.93 -22.1 Acidiphilium_cryptum_JF_5 349163 Non-Human Aerobe Non-Pathogen NA NA Acidithiobacillus_caldus_ATCC_51756 637389 Non-Human NA NA NA NA Acidithiobacillus_ferrooxidans_ATCC_23270 243159 Non-Human Obligate aerobe NA NA NA Acidithiobacillus_ferrooxidans_ATCC_53993 380394 Non-Human Obligate aerobe NA NA NA Acidobacterium_capsulatum_ATCC_51196 240015 Non-Human, Soil Aerobe NA 34.93171 134.082527 Acidothermus_cellulolyticus_11B 351607 Non-Human, Hydrothermal Aerobe Non-Pathogen 44.393704 -110.567703 Acidovorax_avenae_citrulli_AAC00_1 397945 Non-Human Aerobe Pathogen NA NA Acidovorax_delafieldii_2AN 573060 Non-Human, Soil Aerobe NA NA NA Acidovorax_ebreus_TPSY 535289 Non-Human Facultative NA NA NA Acidovorax_sp_JS42 232721 Non-Human, Soil Aerobe Non-Pathogen NA NA Acinetobacter_baumannii_AB0057 480119 Human Aerobe Pathogen NA NA Acinetobacter_baumannii_AB307_0294 557600 Human Aerobe Pathogen 42.886875 -78.877875 Acinetobacter_baumannii_AB900 557601 Human, Gut Aerobe Pathogen 42.886875 -78.877875 Acinetobacter_baumannii_ACICU 405416 Human Aerobe Pathogen 41.895466 12.482324 Acinetobacter_baumannii_ATCC_17978 400667 Human Aerobe Pathogen NA NA Acinetobacter_baumannii_ATCC_19606 575584 Human, Urogenital (Other) Anaerobe Pathogen NA NA Acinetobacter_baumannii_AYE 509173 Human Aerobe Pathogen NA NA Acinetobacter_baumannii_SDF 509170 Human Aerobe Pathogen NA NA Acinetobacter_calcoaceticus_RUH2202 575585 Human, Skin Aerobe Pathogen 55.603 13.001 Acinetobacter_haemolyticus_ATCC_19194 707232 Human, Airways (Other) Aerobe NA NA NA Acinetobacter_johnsonii_SH046 575586 Human, Skin Anaerobe NA NA NA Acinetobacter_junii_SH205 575587 Human, Gut, Skin Anaerobe NA NA NA Acinetobacter_lwoffii_SH145 575588 Human, Skin Anaerobe NA NA NA Acinetobacter_radioresistens_SH164 575589 Human, Skin Anaerobe NA NA NA Acinetobacter_radioresistens_SK82 596318 Human, Skin Anaerobe NA NA NA Acinetobacter_sp_6013113 592014 Human, Skin Aerobe NA NA NA Acinetobacter_sp_6013150 525243 Human, Skin Aerobe NA NA NA Acinetobacter_sp_6014059 525242 Human, Skin Aerobe NA NA NA Acinetobacter_sp_ADP1 62977 Human, Soil, Food Aerobe Pathogen NA NA Acinetobacter_sp_ATCC_27244 525244 Human, Skin Aerobe NA NA NA Acinetobacter_sp_RUH2624 575564 Human, Skin Anaerobe NA NA NA Acinetobacter_sp_SH024 575565 Human, Skin Anaerobe NA NA NA Actinobacillus_minor_202 591023 Non-Human, Farm Facultative NA NA NA Actinobacillus_minor_NM305 637911 Non-Human, Farm Facultative NA NA NA Actinobacillus_pleuropneumoniae_L20 416269 Non-Human Facultative Pathogen NA NA Actinobacillus_pleuropneumoniae_sv_1_4074 228399 Non-Human, Farm Facultative Pathogen NA NA Actinobacillus_pleuropneumoniae_sv_3_JL03 434271 Non-Human, Farm Facultative Pathogen NA NA Actinobacillus_pleuropneumoniae_sv_7_AP76 537457 Non-Human, Farm Facultative Pathogen NA NA Actinobacillus_succinogenes_130Z 339671 Non-Human, Farm Facultative NA 44.6264 -85.6091 Actinomyces_coleocanis_DSM_15436 525245 Human, Urogenital (Vaginal) Anaerobe NA NA NA Actinomyces_odontolyticus_ATCC_17982 411466 Human, Oral (Other) Facultative Pathogen NA NA Actinomyces_odontolyticus_F0309 649742 Human, Airways (Other) Facultative Pathogen NA NA Actinomyces_sp_oral_taxon_848_str_F0332 649743 Human, Oral (Other) Facultative Pathogen NA NA Actinomyces_urogenitalis_DSM_15434 525246 Human, Urogenital (Vaginal) Microaerophilic NA NA NA Actinosynnema_mirum_DSM_43827 446462 Non-Human, Soil Aerobe NA 40.491816 -74.322087 Aerococcus_viridans 1377 Human, Urogenital (Vaginal) Microaerophilic NA NA NA Aeromicrobium_marinum_DSM_15272 585531 Human, Oral (Other), Marine (Heterotroph) Microaerophilic NA NA NA Aeromonas_hydrophila_hydrophila_ATCC_7966 380703 Human, Food Facultative Pathogen NA NA Aeromonas_salmonicida_salmonicida_A449 382245 Non-Human Facultative Pathogen NA NA Aggregatibacter_actinomycetemcomitans_D11S_1 668336 Human, Oral (Other) Facultative Pathogen NA NA Aggregatibacter_actinomycetemcomitans_D7S_1 694569 Human, Oral (Gingivae) Facultative Pathogen NA NA Aggregatibacter_aphrophilus_NJ8700 634176 Human, Oral (Other) Facultative Non-Pathogen NA NA Agreia_sp_PHSC20C1 312284 Non-Human, Marine (Other) Aerobe NA -64.76667 -64.06667 Agrobacterium_radiobacter_K84 311403 Human Aerobe Pathogen NA NA Agrobacterium_tumefaciens_C58_Cereon 176299 Non-Human Aerobe Pathogen NA NA Agrobacterium_vitis_S4 311402 Non-Human Aerobe Pathogen NA NA Akkermansia_muciniphila_ATCC_BAA_835 349741 Human, Gut Anaerobe NA NA NA Alcanivorax_borkumensis_SK2 393595 Non-Human, Marine (Other) Aerobe Non-Pathogen 53.598161 6.702723 Alcanivorax_sp_DG881 236097 Non-Human, Marine (Heterotroph) Aerobe NA -42.88667 147.78333 Algoriphagus_sp_PR1 388413 Non-Human, Marine (Heterotroph) Aerobe NA NA NA Alicyclobacillus_acidocaldarius_LAA1 543302 Non-Human, Hydrothermal Aerobe NA 44.376262 -110.690383 Alicyclobacillus_acidocaldarius_acidocaldarius_104_IA_DSM_446 521098 Non-Human Aerobe NA 44.376 -110.69 Aliivibrio_salmonicida_LFI1238 316275 Non-Human Facultative Pathogen 70.662316 23.682752 Alistipes_putredinis_DSM_17216 445970 Human, Gut, Soil Anaerobe NA NA NA Alkalilimnicola_ehrlichei_MLHE_1 187272 Non-Human Anaerobe Non-Pathogen 37.986853 -119.045711 Alkaliphilus_metalliredigens_QYMF 293826 Non-Human Anaerobe Non-Pathogen NA NA Alkaliphilus_oremlandii_OhILAs 350688 Non-Human Anaerobe Non-Pathogen NA NA Allochromatium_vinosum_DSM_180 572477 Non-Human Anaerobe NA NA NA Alteromonas_macleodii_Deep_ecotype_DSM_17117 314275 Non-Human, Marine (Heterotroph) Aerobe NA 41.6 17.36889 Aminobacterium_colombiense_DSM_12261 572547 Non-Human Obligate anaerobe NA 4.63 -74.08 Ammonifex_degensii_KC4 429009 Non-Human, Hydrothermal Anaerobe NA NA NA Anabaena_azollae_0708 551115 Non-Human Aerobe NA NA NA Anabaena_variabilis_ATCC_29413 240292 Non-Human, Soil Aerobe NA NA NA Anaerobaculum_hydrogeniformans_ATCC_BAA_1850 592015 Human, Gut, Oral (Other) Obligate anaerobe NA NA NA Anaerococcus_hydrogenalis_DSM_7454 561177 Human, Gut Anaerobe NA NA NA Anaerococcus_lactolyticus_ATCC_51172 525254 Human, Urogenital (Vaginal) Anaerobe NA NA NA Anaerococcus_prevotii_PC_1_DSM_20548 525919 Human Anaerobe NA NA NA Anaerococcus_tetradius_ATCC_35098 525255 Human, Urogenital (Vaginal) Anaerobe NA NA NA Anaerococcus_vaginalis_ATCC_51170 655811 Human, Skin Anaerobe NA NA NA Anaerofustis_stercorihominis_DSM_17244 445971 Human, Gut Anaerobe Non-Pathogen 34.052187 -118.243425 Anaeromyxobacter_dehalogenans_2CP_1 455488 Non-Human, Soil Anaerobe NA 42.733621 -84.546582 Anaeromyxobacter_dehalogenans_2CP_C 290397 Non-Human, Soil Anaerobe Non-Pathogen NA NA Anaeromyxobacter_sp_Fw109_5 404589 Non-Human, Soil Anaerobe Non-Pathogen NA NA Anaeromyxobacter_sp_K 447217 Non-Human, Soil Anaerobe NA NA NA Anaerostipes_caccae_DSM_14662 411490 Human, Gut Anaerobe Non-Pathogen NA NA Anaerotruncus_colihominis_DSM_17241 445972 Human, Gut Anaerobe NA 41.875156 -87.667984 Anaplasma_centrale_str_Israel 574556 Non-Human Aerobe Pathogen NA NA Anaplasma_marginale_Florida 320483 Non-Human, Farm Aerobe Pathogen NA NA Anaplasma_marginale_St_Maries 234826 Non-Human, Farm Aerobe Pathogen NA NA Anaplasma_marginale_str_Mississippi 517436 Non-Human, Farm Aerobe Pathogen NA NA Anaplasma_marginale_str_Puerto_Rico 517437 Human Aerobe Pathogen NA NA Anaplasma_marginale_str_Virginia 403779 Human Aerobe Pathogen NA NA Anaplasma_phagocytophilum_HZ 212042 Human Aerobe Pathogen 40.756054 -73.986951 Anoxybacillus_flavithermus_WK1 491915 Non-Human, Hydrothermal Facultative NA -38.626686 176.103491 Aquifex_aeolicus_VF5 224324 Non-Human, Hydrothermal, Marine (Other) Facultative NA NA NA Arcanobacterium_haemolyticum_DSM_20595 644284 Human, Oral (Other) Anaerobe NA NA NA Arcobacter_butzleri_RM4018 367737 Human, Marine (Other) Aerobe Pathogen NA NA Arcobacter_nitrofigilis_DSM_7299 572480 Non-Human Microaerophilic NA 44.65 -63.6 Aromatoleum_aromaticum_EbN1 76114 Non-Human, Soil Facultative NA NA NA Arthrobacter_aurescens_TC1 290340 Non-Human, Soil Aerobe Non-Pathogen NA NA Arthrobacter_chlorophenolicus_A6 452863 Non-Human, Soil Aerobe NA 40.567095 -105.077036 Arthrobacter_sp_FB24 290399 Non-Human, Soil Aerobe Pathogen NA NA Arthrospira_maxima_CS_328 513049 Non-Human Facultative NA 13.330266 14.100133 Arthrospira_platensis_str_Paraca 634502 Non-Human Facultative NA NA NA Aster_yellows_witches_broom_phytoplasma_AYWB 322098 Non-Human Aerobe Pathogen 41 -82.4498 Asticcacaulis_excentricus_CB_48 573065 Non-Human Aerobe NA NA NA Atopobium_parvulum_DSM_20469 521095 Human, Oral (Gingivae) Obligate anaerobe NA NA NA Atopobium_rimae_ATCC_49626 553184 Human, Oral (Other) Anaerobe Pathogen NA NA Atopobium_vaginae_DSM_15829 525256 Human, Urogenital (Vaginal) Anaerobe NA NA NA Azoarcus_sp_BH72 62928 Non-Human, Soil Facultative Non-Pathogen 31.5841 72.6599 Azorhizobium_caulinodans_ORS_571 438753 Non-Human NA NA NA NA Azospirillum_sp_B510 137722 Non-Human, Soil Facultative NA NA NA Azotobacter_vinelandii_DJ_ATCC_BAA_1303 322710 Non-Human, Soil Aerobe NA NA NA Bacillus_amyloliquefaciens_FZB42 326423 Non-Human, Soil Aerobe NA NA NA Bacillus_anthracis_A0174 486622 Non-Human Facultative NA NA NA Bacillus_anthracis_A0193 486619 Non-Human, Farm Facultative Pathogen NA NA Bacillus_anthracis_A0248 592021 Human Facultative Pathogen NA NA Bacillus_anthracis_A0389 486623 Non-Human Facultative Pathogen -6.247447 107.148452 Bacillus_anthracis_A0442 486621 Human Facultative Pathogen -23.821424 31.445618 Bacillus_anthracis_A0465 486620 Non-Human, Farm Facultative Pathogen NA NA Bacillus_anthracis_A0488 486624 Non-Human, Farm Facultative Pathogen NA NA Bacillus_anthracis_Ames 198094 Non-Human, Soil Aerobe Non-Pathogen NA NA Bacillus_anthracis_Ames_Ancestor 261594 Human, Soil Facultative Pathogen NA NA Bacillus_anthracis_CDC_684 568206 Human, Soil Aerobe Pathogen NA NA Bacillus_anthracis_Sterne 260799 Non-Human, Soil Facultative Non-Pathogen 51.372 -0.452 Bacillus_anthracis_Tsiankovskii_I 405536 Human, Soil Facultative Pathogen NA NA Bacillus_anthracis_str_A1055 280355 Human, Soil Facultative Pathogen NA NA Bacillus_anthracis_str_Australia_94 280477 Human, Soil Facultative Pathogen NA NA Bacillus_anthracis_str_CNEVA_9066 280354 Human, Soil Facultative Pathogen NA NA Bacillus_anthracis_str_Kruger_B 205919 Human, Soil Aerobe Pathogen -23.821424 31.445618 Bacillus_anthracis_str_Vollum 261591 Human, Soil Facultative Pathogen NA NA Bacillus_anthracis_str_Western_North_America_USA6153 212045 Human, Soil Aerobe Pathogen NA NA Bacillus_cellulosilyticus_DSM_2522 649639 Non-Human, Soil Facultative NA NA NA Bacillus_cereus_03BB102 572264 Human, Soil Facultative Pathogen 29.425037 -98.493722 Bacillus_cereus_03BB108 451709 Human, Soil Facultative Pathogen NA NA Bacillus_cereus_172560W 526967 Human, Skin, Soil Aerobe Pathogen NA NA Bacillus_cereus_95_8201 526979 Human, Soil Aerobe Pathogen NA NA Bacillus_cereus_AH1134 405533 Human, Soil Facultative Pathogen 35.493138 -97.45914 Bacillus_cereus_AH1271 526992 Human, Soil Aerobe Pathogen NA NA Bacillus_cereus_AH1272 526993 Human, Urogenital (Other), Soil Aerobe Pathogen NA NA Bacillus_cereus_AH1273 526994 Human, Soil Aerobe Pathogen NA NA Bacillus_cereus_AH187 405534 Human, Gut, Soil Facultative Pathogen 51.500152 -0.126236 Bacillus_cereus_AH676 526991 Human, Soil Aerobe Pathogen NA NA Bacillus_cereus_AH820 405535 Human, Oral (Other), Soil Facultative Pathogen 60.00002 11.36903 Bacillus_cereus_ATCC_10876 526980 Human, Soil Aerobe Pathogen NA NA Bacillus_cereus_ATCC_10987 222523 Human, Soil Facultative Pathogen NA NA Bacillus_cereus_ATCC_14579 226900 Human, Soil Facultative Pathogen NA NA Bacillus_cereus_ATCC_4342 526977 Human, Soil Aerobe Pathogen NA NA Bacillus_cereus_B4264 405532 Human, Soil Facultative Pathogen NA NA Bacillus_cereus_BDRD_Cer4 526978 Human, Soil Aerobe Pathogen NA NA Bacillus_cereus_BDRD_ST196 526976 Human, Soil Aerobe Pathogen NA NA Bacillus_cereus_BDRD_ST24 526974 Human, Soil Aerobe Pathogen NA NA Bacillus_cereus_BDRD_ST26 526975 Human, Soil Aerobe Pathogen NA NA Bacillus_cereus_BGSC_6E1 526970 Human, Soil Aerobe Pathogen NA NA Bacillus_cereus_E33L 288681 Human, Soil Facultative Pathogen -19.018917 16.346379 Bacillus_cereus_F65185 526989 Human, Soil Aerobe Pathogen 40.756054 -73.986951 Bacillus_cereus_G9241 269801 Human, Soil Facultative Pathogen NA NA Bacillus_cereus_G9842 405531 Human, Gut, Soil Facultative Pathogen NA NA Bacillus_cereus_H3081_97 451708 Human, Soil Facultative Pathogen NA NA Bacillus_cereus_NVH0597_99 451707 Human, Soil Facultative Pathogen NA NA Bacillus_cereus_Q1 361100 Non-Human, Soil Facultative Non-Pathogen 46.59019 125.104637 Bacillus_cereus_R309803 526968 Human, Soil Aerobe Pathogen NA NA Bacillus_cereus_Rock1_15 526982 Human, Soil Aerobe Pathogen 39.083916 -77.156823 Bacillus_cereus_Rock1_3 526981 Human, Soil Aerobe Pathogen 39.083916 -77.156823 Bacillus_cereus_Rock3_29 526984 Human, Soil Aerobe Pathogen 39.083916 -77.156823 Bacillus_cereus_Rock3_42 526985 Human, Soil Aerobe Pathogen 39.083916 -77.156823 Bacillus_cereus_Rock3_44 526986 Human, Soil Aerobe Pathogen 39.083916 -77.156823 Bacillus_cereus_Rock4_18 526988 Human, Soil Aerobe Pathogen 39.083916 -77.156823 Bacillus_cereus_Rock4_2 526987 Human, Soil Aerobe Pathogen NA NA Bacillus_cereus_W 405917 Human, Soil Facultative Pathogen NA NA Bacillus_cereus_cytotoxis_NVH_391_98 315749 Non-Human, Soil Facultative Pathogen NA NA Bacillus_cereus_m1293 526973 Human, Soil Aerobe Pathogen NA NA Bacillus_cereus_mm1550 526969 Human, Soil Aerobe Pathogen NA NA Bacillus_clausii_KSM_K16 66692 Non-Human, Soil NA NA NA NA Bacillus_coagulans_36D1 345219 Non-Human, Soil Facultative NA 38.579 -122.58 Bacillus_coahuilensis_m4_4 441769 Non-Human NA NA 26.986559 -102.063686 Bacillus_halodurans_C_125 272558 Non-Human, Soil Facultative NA NA NA Bacillus_licheniformis_ATCC_14580_Goettingen 279010 Human, Soil Facultative Pathogen NA NA Bacillus_megaterium_DSM319 592022 Non-Human, Soil Facultative NA NA NA Bacillus_megaterium_QM_B1551 545693 Non-Human, Soil Aerobe NA 42.283783 -71.347275 Bacillus_mycoides_DSM_2048 526997 Non-Human, Soil Aerobe NA NA NA Bacillus_pseudofirmus_OF4 398511 Non-Human, Soil Facultative NA NA NA Bacillus_pseudomycoides_DSM_12442 527000 Non-Human, Soil Aerobe NA NA NA Bacillus_pumilus_ATCC_7061 536229 Non-Human, Soil Aerobe Non-Pathogen NA NA Bacillus_pumilus_SAFR_032 315750 Non-Human, Soil Aerobe Pathogen NA NA Bacillus_selenitireducens_MLS10 439292 Non-Human Facultative NA 37.986853 -119.045711 Bacillus_sp_B14905 388400 Non-Human, Marine (Other) Aerobe NA NA NA Bacillus_sp_NRRL_B_14911 313627 Non-Human, Marine (Other) NA NA 26.35 -84.5 Bacillus_sp_SG_1 161544 Non-Human, Marine (Other) NA NA NA NA Bacillus_subtilis_NCIB_3610 535026 Non-Human, Soil Facultative NA NA NA Bacillus_subtilis_subsp_spizizenii_ATCC_6633 703612 Non-Human, Soil Facultative NA NA NA Bacillus_subtilis_subsp_subtilis_str_168 224308 Non-Human, Soil Facultative NA 50.814788 8.769239 Bacillus_subtilis_subtilis_JH642 535025 Non-Human, Soil Facultative NA NA NA Bacillus_subtilis_subtilis_SMY 535024 Non-Human, Soil Facultative NA NA NA Bacillus_thuringiensis_Al_Hakam 412694 Human, Skin, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_BMB171 714359 Non-Human Microaerophilic NA NA NA Bacillus_thuringiensis_Bt407 527021 Non-Human, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_IBL200 527019 Human, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_IBL4222 527020 Non-Human, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_sv_andalousiensis_BGSC_4AW1 527032 Non-Human, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_sv_berliner_ATCC_10792 527031 Non-Human, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_sv_huazhongensis_BGSC_4BD1 527030 Non-Human, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_sv_israelensis_ATCC_35646 339854 Non-Human, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_sv_konkukian_97_27 281309 Human, Skin, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_sv_kurstaki_T03a001 527023 Non-Human, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_sv_monterrey_BGSC_4AJ1 527022 Non-Human, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_sv_pakistani_t13001 527027 Non-Human, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_sv_pondicheriensis_BGSC_4BA1 527029 Non-Human, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_sv_pulsiensis_BGSC_4CC1 527028 Non-Human, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_sv_sotto_T04001 527026 Non-Human, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_sv_thuringiensis_T01001 527025 Non-Human, Soil Facultative Pathogen NA NA Bacillus_thuringiensis_sv_tochigiensis_BGSC_4Y1 527024 Non-Human, Soil Facultative Pathogen NA NA Bacillus_tusciae_DSM_2912 562970 Non-Human Aerobe NA 43.326 10.498 Bacillus_weihenstephanensis_KBAB4 315730 Non-Human, Soil Facultative Non-Pathogen NA NA Bacteroides_caccae_ATCC_43185 411901 Human, Gut Anaerobe Pathogen NA NA Bacteroides_cellulosilyticus_DSM_14838 537012 Human, Gut Anaerobe NA NA NA Bacteroides_coprocola_M16_DSM_17136 470145 Human, Gut Anaerobe NA NA NA Bacteroides_coprophilus_DSM_18228 547042 Human, Gut Anaerobe NA NA NA Bacteroides_dorei_DSM_17855 483217 Human, Gut Anaerobe Non-Pathogen NA NA Bacteroides_eggerthii_DSM_20697 483216 Human, Gut Anaerobe Non-Pathogen NA NA Bacteroides_finegoldii_DSM_17565 483215 Human, Gut Anaerobe Non-Pathogen NA NA Bacteroides_fragilis_3_1_12 457424 Human, Gut Anaerobe NA NA NA Bacteroides_fragilis_NCTC_9343 272559 Human, Gut Obligate anaerobe Pathogen 51.5849 -0.1272 Bacteroides_fragilis_YCH46 295405 Human, Gut Obligate anaerobe Pathogen 34.3039 131.4724 Bacteroides_intestinalis_341_DSM_17393 471870 Human, Gut Anaerobe NA NA NA Bacteroides_ovatus_ATCC_8483 411476 Human, Gut Anaerobe Non-Pathogen NA NA Bacteroides_ovatus_SD_CC_2a 702444 Human, Gut NA NA NA NA Bacteroides_ovatus_SD_CMC_3f 702443 Human, Gut NA NA NA NA Bacteroides_plebeius_DSM_17135 484018 Human, Gut Anaerobe Non-Pathogen NA NA Bacteroides_sp_2_1_22 469588 Human, Gut Anaerobe NA NA NA Bacteroides_sp_2_1_33B 469589 Human, Gut Anaerobe NA NA NA Bacteroides_sp_2_2_4 469590 Human, Gut Anaerobe NA NA NA Bacteroides_sp_3_1_33FAA 457391 Human, Gut Anaerobe NA NA NA Bacteroides_sp_3_2_5 457392 Human, Gut Anaerobe NA NA NA Bacteroides_sp_4_3_47FAA 457394 Human, Gut Anaerobe NA NA NA Bacteroides_sp_9_1_42FAA 457395 Human, Gut Anaerobe NA NA NA Bacteroides_sp_D1 556258 Human, Gut Anaerobe NA NA NA Bacteroides_sp_D2 556259 Human, Gut Anaerobe NA NA NA Bacteroides_sp_D20 585543 Human, Gut Anaerobe NA NA NA Bacteroides_sp_D4 556260 Human, Gut Anaerobe NA NA NA Bacteroides_stercoris_ATCC_43183 449673 Human, Gut Anaerobe Non-Pathogen NA NA Bacteroides_thetaiotaomicron_VPI_5482 226186 Human, Gut Obligate anaerobe Pathogen NA NA Bacteroides_uniformis_ATCC_8492 411479 Human, Gut Anaerobe Non-Pathogen NA NA Bacteroides_vulgatus_ATCC_8482 435590 Human, Gut Anaerobe Pathogen NA NA Bacteroides_vulgatus_PC510 702446 Human, Gut Anaerobe Pathogen NA NA Bacteroides_xylanisolvens_SD_CC_1b 702447 Human, Gut Anaerobe NA NA NA Bartonella_bacilliformis_KC583 360095 Human Aerobe Pathogen NA NA Bartonella_grahamii_as4aup 634504 Non-Human Aerobe Pathogen NA NA Bartonella_henselae_Houston_1 283166 Human Aerobe Pathogen 29.777 -95.376 Bartonella_quintana_Toulouse 283165 Human, Gut Aerobe Pathogen NA NA Bartonella_tribocorum_CIP_105476 382640 Non-Human Aerobe Pathogen NA NA Basfia_succiniciproducens_MBEL55E 221988 Non-Human, Farm Anaerobe Non-Pathogen NA NA Baumannia_cicadellinicola_Hc 374463 Non-Human NA Non-Pathogen NA NA Bdellovibrio_bacteriovorus_HD100 264462 Non-Human, Soil Aerobe NA NA NA Beggiatoa_sp_PS 422289 Non-Human, Marine (Other) NA NA 54.470842 9.83457 Beijerinckia_indica_indica_ATCC_9039 395963 Non-Human, Soil Aerobe NA NA NA Bermanella_marisrubri 207949 Non-Human, Marine (Other) Aerobe NA 23.684774 37.485352 Beutenbergia_cavernae_HKI_0122_DSM_12333 471853 Non-Human, Soil Aerobe NA 25.307 110.263 Bifidobacterium_adolescentis_ATCC_15703 367928 Human, Gut Anaerobe Non-Pathogen 52.5534 13.4083 Bifidobacterium_adolescentis_L2_32 411481 Human, Gut Anaerobe Non-Pathogen NA NA Bifidobacterium_angulatum_DSM_20098 518635 Human, Gut Anaerobe NA NA NA Bifidobacterium_animalis_lactis_AD011 442563 Human, Gut Anaerobe Non-Pathogen NA NA Bifidobacterium_animalis_lactis_HN019 486409 Human, Gut Anaerobe NA NA NA Bifidobacterium_animalis_subsp_lactis_BB_12 552531 Human, Gut Anaerobe Non-Pathogen NA NA Bifidobacterium_animalis_subsp_lactis_Bl_04 580050 Human, Gut Anaerobe Non-Pathogen NA NA Bifidobacterium_animalis_subsp_lactis_DSM_10140 555970 Human, Gut Anaerobe Non-Pathogen NA NA Bifidobacterium_animalis_subsp_lactis_V9 573236 Human, Gut Anaerobe Non-Pathogen NA NA Bifidobacterium_bifidum_NCIMB_41171 398513 Human, Gut Anaerobe NA NA NA Bifidobacterium_breve_DSM_20213 518634 Human, Gut Anaerobe NA NA NA Bifidobacterium_catenulatum_DSM_16992 566552 Human, Gut Anaerobe NA NA NA Bifidobacterium_dentium_ATCC_27678 473819 Human, Gut Anaerobe Non-Pathogen NA NA Bifidobacterium_dentium_Bd1 401473 Human, Oral (Other) Anaerobe Non-Pathogen NA NA Bifidobacterium_gallicum_DSM_20093 561180 Human, Gut Anaerobe NA NA NA Bifidobacterium_longum_NCC2705 206672 Human, Gut Anaerobe Non-Pathogen NA NA Bifidobacterium_longum_infantis_ATCC_15697 391904 Human, Gut Anaerobe Non-Pathogen NA NA Bifidobacterium_longum_infantis_ATCC_55813 548480 Human, Gut Anaerobe NA NA NA Bifidobacterium_longum_infantis_CCUG_52486 537937 Human, Gut Anaerobe NA NA NA Bifidobacterium_longum_subsp_longum_JDM301 759350 Human, Gut NA NA NA NA Bifidobacterium_pseudocatenulatum_DSM_20438 547043 Human, Gut Anaerobe NA NA NA Blastopirellula_marina_DSM_3645 314230 Non-Human, Marine (Other) NA NA 54.4 10.2 Blattabacterium_sp_Blattella_germanica_str_Bge 331104 Non-Human Aerobe NA NA NA Blattabacterium_sp_Periplaneta_americana_str_BPLAN 600809 Non-Human Aerobe NA NA NA Blautia_hansenii_VPI_C7_24_DSM_20583 537007 Human, Gut Anaerobe NA NA NA Blautia_hydrogenotrophicus_S5a33_DSM_10507 476272 Human, Gut Anaerobe NA NA NA Bordetella_avium_197N 360910 Non-Human Aerobe Pathogen NA NA Bordetella_bronchiseptica_RB50 257310 Non-Human Obligate aerobe Pathogen NA NA Bordetella_parapertussis_12822 257311 Human Obligate aerobe Pathogen NA NA Bordetella_pertussis_Tohama_I 257313 Human Aerobe Pathogen NA NA Bordetella_petrii 94624 Non-Human Anaerobe Pathogen NA NA Borrelia_afzelii_ACA_1 445986 Human, Skin Aerobe Pathogen NA NA Borrelia_afzelii_PKo 390236 Human, Skin Aerobe Pathogen NA NA Borrelia_burgdorferi_118a 476210 Human, Skin Microaerophilic Pathogen 40.756054 -73.986951 Borrelia_burgdorferi_156a 445983 Human Aerobe Pathogen NA NA Borrelia_burgdorferi_29805 498738 Human Aerobe Pathogen NA NA Borrelia_burgdorferi_64b 498740 Human, Skin Microaerophilic Pathogen NA NA Borrelia_burgdorferi_72a 476211 Human, Skin Aerobe Pathogen 40.756054 -73.986951 Borrelia_burgdorferi_80a 498736 Human, Skin Aerobe Pathogen NA NA Borrelia_burgdorferi_94a 476212 Human, Skin Aerobe Pathogen 40.756054 -73.986951 Borrelia_burgdorferi_B31 224326 Human Aerobe Pathogen NA NA Borrelia_burgdorferi_Bol26 445984 Human, Skin Aerobe Pathogen NA NA Borrelia_burgdorferi_CA_11_2a 498739 Human Aerobe Pathogen NA NA Borrelia_burgdorferi_WI91_23 498737 Non-Human Aerobe Pathogen NA NA Borrelia_burgdorferi_ZS7 445985 Human Microaerophilic Pathogen NA NA Borrelia_duttonii_Ly 412419 Human Aerobe Pathogen NA NA Borrelia_garinii_Far04 519049 Human Microaerophilic Pathogen NA NA Borrelia_garinii_PBi 290434 Human Aerobe Pathogen NA NA Borrelia_garinii_PBr 498743 Human Aerobe Pathogen NA NA Borrelia_hermsii_DAH 314723 Human Aerobe Pathogen NA NA Borrelia_recurrentis_A1 412418 Human Aerobe Pathogen NA NA Borrelia_sp_SV1 498741 Non-Human Microaerophilic Pathogen NA NA Borrelia_spielmanii_A14S 498742 Human Microaerophilic Pathogen NA NA Borrelia_turicatae_91E135 314724 Non-Human Aerobe Pathogen NA NA Borrelia_valaisiana_VS116 445987 Human Microaerophilic Pathogen NA NA Brachybacterium_faecium_DSM_4810 446465 Non-Human, Soil Aerobe NA NA NA Brachyspira_hyodysenteriae_WA1_ATCC_49526 565034 Non-Human, Farm Anaerobe Pathogen NA NA Brachyspira_murdochii_DSM_12563 526224 Non-Human, Farm Anaerobe NA 52.939 -73.549 Bradyrhizobium_japonicum_USDA_110 224911 Non-Human Aerobe NA NA NA Bradyrhizobium_sp_BTAi1 288000 Non-Human, Soil Aerobe NA NA NA Bradyrhizobium_sp_ORS278 114615 Non-Human, Soil Aerobe Non-Pathogen NA NA Brevibacillus_brevis_NBRC_100599 358681 Non-Human, Soil Aerobe NA NA NA Brevibacterium_linens_BL2 321955 Non-Human, Soil, Food Aerobe NA NA NA Brevibacterium_mcbrellneri_ATCC_49030 585530 Human, Urogenital (Other) Aerobe NA NA NA Brevundimonas_sp_BAL3 391600 Non-Human, Marine (Other) Aerobe NA 63.51611 19.81583 Brevundimonas_subvibrioides_ATCC_15264 633149 Non-Human Aerobe NA NA NA Brucella_abortus_NCTC_8038 575591 Human Aerobe Pathogen NA NA Brucella_abortus_S19 430066 Human Aerobe Pathogen NA NA Brucella_abortus_bv_1_9_941 262698 Human Facultative Pathogen NA NA Brucella_abortus_bv_2_str_86_8_59 520450 Human Aerobe Pathogen NA NA Brucella_abortus_bv_3_str_Tulya 520451 Human Aerobe Pathogen NA NA Brucella_abortus_bv_4_str_292 520452 Human Aerobe Pathogen NA NA Brucella_abortus_bv_5_str_B3196 520453 Human Aerobe Pathogen NA NA Brucella_abortus_bv_6_str_870 520454 Human Aerobe Pathogen NA NA Brucella_abortus_bv_9_str_C68 520455 Human Aerobe Pathogen NA NA Brucella_abortus_str_2308_A 641140 Human Aerobe Pathogen NA NA Brucella_canis_ATCC_23365 483179 Non-Human Aerobe Pathogen NA NA Brucella_ceti_B1_94 520457 Human Aerobe Pathogen NA NA Brucella_ceti_Cudo 595497 Non-Human Aerobe Pathogen NA NA Brucella_ceti_M13_05_1 520460 Human Aerobe Pathogen NA NA Brucella_ceti_M490_95_1 520458 Human Aerobe Pathogen NA NA Brucella_ceti_M644_93_1 520459 Human Aerobe Pathogen NA NA Brucella_melitensis_16M 224914 Non-Human, Farm Aerobe Pathogen NA NA Brucella_melitensis_ATCC_23457 546272 Human Aerobe Pathogen NA NA Brucella_melitensis_bv_1_str_Rev_1 520464 Human Aerobe Pathogen NA NA Brucella_melitensis_bv_2_str_63_9 520465 Human Aerobe Pathogen NA NA Brucella_melitensis_bv_3_str_Ether 520466 Human Aerobe Pathogen NA NA Brucella_melitensis_bv_Abortus_2308 359391 Human Aerobe Pathogen NA NA Brucella_microti_CCM_4915 568815 Human, Soil Aerobe Pathogen 48.991572 16.767425 Brucella_neotomae_5K33 520456 Human Aerobe Pathogen NA NA Brucella_ovis_ATCC_25840 444178 Non-Human, Farm Facultative Pathogen NA NA Brucella_pinnipedialis_B2_94 520461 Human Aerobe Pathogen NA NA Brucella_pinnipedialis_M163_99_10 520463 Human Aerobe Pathogen NA NA Brucella_pinnipedialis_M292_94_1 520462 Human Aerobe Pathogen NA NA Brucella_sp_83_13 520449 Human Aerobe Pathogen NA NA Brucella_sp_F5_99 437701 Human Aerobe Pathogen NA NA Brucella_sp_NVSL_07_0026 520448 Human Aerobe Pathogen NA NA Brucella_suis_1330 204722 Non-Human, Farm Aerobe Pathogen NA NA Brucella_suis_ATCC_23445 470137 Human Aerobe Pathogen NA NA Brucella_suis_bv_3_str_686 520487 Human Aerobe Pathogen NA NA Brucella_suis_bv_4_str_40 520488 Human Aerobe Pathogen NA NA Brucella_suis_bv_5_str_513 520489 Human Aerobe Pathogen NA NA Bryantella_formatexigens_I_52_DSM_14469 478749 Human, Gut Anaerobe NA NA NA Buchnera_aphidicola_5A_Acyrthosiphon_pisum 563178 Non-Human NA NA 43.084 -89.401 Buchnera_aphidicola_APS 107806 Non-Human NA NA NA NA Buchnera_aphidicola_Bp 224915 Non-Human NA NA NA NA Buchnera_aphidicola_Sg 198804 Non-Human NA NA NA NA Buchnera_aphidicola_Tuc7_Acyrthosiphon_pisum 561501 Non-Human NA NA 32.248 -110.926 Buchnera_aphidicola_str_LSR1_Acyrthosiphon_pisum 593275 Non-Human NA NA NA NA Bulleidia_extructa_W1219 679192 Human, Oral (Other) Obligate anaerobe NA NA NA Burkholderia_ambifaria_IOP40_10 396596 Non-Human Facultative NA NA NA Burkholderia_ambifaria_MC40_6 398577 Human Facultative Pathogen NA NA Burkholderia_ambifaria_MEX_5 396597 Non-Human Facultative NA NA NA Burkholderia_cenocepacia_AU_1054 331271 Human Facultative Pathogen NA NA Burkholderia_cenocepacia_HI2424 331272 Human, Soil Facultative Pathogen NA NA Burkholderia_cenocepacia_J2315 216591 Human Aerobe Pathogen 55.950176 -3.187536 Burkholderia_cenocepacia_MC0_3 406425 Human Facultative Pathogen NA NA Burkholderia_cepacia_AMMD 339670 Non-Human Facultative NA NA NA Burkholderia_glumae_BGR1 626418 Non-Human Aerobe Pathogen NA NA Burkholderia_mallei_2002721280 370895 Human NA Pathogen NA NA Burkholderia_mallei_ATCC_23344 243160 Human, Soil Aerobe Pathogen NA NA Burkholderia_mallei_FMH 334802 Human NA Pathogen NA NA Burkholderia_mallei_GB8_horse_4 320390 Human Aerobe Pathogen NA NA Burkholderia_mallei_JHU 334803 Human NA Pathogen NA NA Burkholderia_mallei_NCTC_10229 412022 Human Aerobe Pathogen NA NA Burkholderia_mallei_NCTC_10247 320389 Human Aerobe Pathogen 39.940594 32.854385 Burkholderia_mallei_PRL_20 436115 Human Aerobe Pathogen NA NA Burkholderia_mallei_SAVP1 320388 Human Aerobe Pathogen NA NA Burkholderia_multivorans_ATCC_17616 395019 Human Facultative NA NA NA Burkholderia_multivorans_CGD1 513051 Human Aerobe Pathogen 38.989977 -77.121382 Burkholderia_multivorans_CGD2 513052 Human, Oral (Other) Aerobe Pathogen NA NA Burkholderia_multivorans_CGD2M 513053 Human Aerobe Pathogen NA NA Burkholderia_oklahomensis_C6786 441162 Human, Skin Aerobe Pathogen NA NA Burkholderia_oklahomensis_EO147 441163 Human, Gut Aerobe Pathogen NA NA Burkholderia_phymatum_STM815 391038 Non-Human, Soil Facultative NA NA NA Burkholderia_phytofirmans_PsJN 398527 Non-Human, Soil Facultative NA 47.9615 16.5171 Burkholderia_pseudomallei_1106a 357348 Human, Soil Aerobe Pathogen NA NA Burkholderia_pseudomallei_1106b 357347 Human, Soil Aerobe Pathogen NA NA Burkholderia_pseudomallei_112 441154 Human Aerobe Pathogen NA NA Burkholderia_pseudomallei_14 441160 Human Aerobe Pathogen NA NA Burkholderia_pseudomallei_1655 331109 Human, Soil Aerobe Pathogen NA NA Burkholderia_pseudomallei_1710a 320371 Non-Human, Soil Aerobe Pathogen NA NA Burkholderia_pseudomallei_1710b 320372 Human, Soil Aerobe Pathogen NA NA Burkholderia_pseudomallei_305 425067 Human, Soil Aerobe Pathogen -12.354729 130.88165 Burkholderia_pseudomallei_406e 360118 Human, Soil Aerobe Pathogen NA NA Burkholderia_pseudomallei_576 557724 Human, Soil Aerobe Pathogen 13.723419 100.476232 Burkholderia_pseudomallei_668 320373 Human, Soil Aerobe Pathogen NA NA Burkholderia_pseudomallei_7894 441156 Human Aerobe Pathogen NA NA Burkholderia_pseudomallei_9 441158 Human Aerobe Pathogen NA NA Burkholderia_pseudomallei_91 441159 Human Aerobe Pathogen NA NA Burkholderia_pseudomallei_B7210 441155 Human Aerobe Pathogen NA NA Burkholderia_pseudomallei_BCC215 441152 Human Aerobe Pathogen NA NA Burkholderia_pseudomallei_DM98 441161 Human Aerobe Pathogen NA NA Burkholderia_pseudomallei_K96243 272560 Human, Soil Aerobe Pathogen NA NA Burkholderia_pseudomallei_MSHR346 536230 Human, Airways (Other), Soil Aerobe Pathogen -12.353811 130.882602 Burkholderia_pseudomallei_NCTC_13177 441153 Human Aerobe Pathogen NA NA Burkholderia_pseudomallei_Pakistan_9 595498 Human, Soil Aerobe Pathogen NA NA Burkholderia_pseudomallei_Pasteur 331978 Human, Soil Aerobe Pathogen NA NA Burkholderia_pseudomallei_S13 320374 Human, Soil Aerobe Non-Pathogen NA NA Burkholderia_sp_CCGE1001 640510 Non-Human Facultative NA NA NA Burkholderia_sp_CCGE1002 640511 Non-Human Facultative NA NA NA Burkholderia_sp_CCGE1003 640512 Non-Human Facultative NA NA NA Burkholderia_sp_Ch1_1 243261 Non-Human, Soil Facultative NA NA NA Burkholderia_sp_H160 516466 Non-Human Facultative NA NA NA Burkholderia_thailandensis_Bt4 441164 Non-Human, Soil Aerobe NA NA NA Burkholderia_thailandensis_E264 271848 Non-Human, Soil Aerobe Non-Pathogen NA NA Burkholderia_thailandensis_MSMB43 441157 Human Aerobe Pathogen NA NA Burkholderia_thailandensis_TXDOH 441165 Human, Soil Aerobe NA NA NA Burkholderia_ubonensis_Bu 441166 Non-Human, Soil Aerobe NA NA NA Burkholderia_vietnamiensis_G4 269482 Non-Human Facultative Pathogen 30.473413 -87.212261 Burkholderia_xenovorans_LB400 266265 Human, Soil Aerobe Pathogen 43.24 -73.6678 Butyrivibrio_crossotus_DSM_2876 511680 Human, Gut Anaerobe NA NA NA Caldicellulosiruptor_bescii_Z_1320_DSM_6725 521460 Non-Human, Hydrothermal Obligate anaerobe NA NA NA Caldicellulosiruptor_saccharolyticus_DSM_8903 351627 Non-Human, Hydrothermal Anaerobe Non-Pathogen NA NA Caminibacter_mediatlanticus_TB_2 391592 Non-Human, Marine (Other) NA NA 36.23333 -33.90167 Campylobacter_coli_RM2228 306254 Non-Human Microaerophilic Pathogen NA NA Campylobacter_concisus_13826 360104 Human, Gut Microaerophilic Pathogen NA NA Campylobacter_curvus_525_92 360105 Human, Gut Microaerophilic Pathogen NA NA Campylobacter_fetus_fetus_82_40 360106 Human Microaerophilic Pathogen NA NA Campylobacter_fetus_subsp_venerealis_str_Azul_94 593452 Non-Human, Farm Microaerophilic Pathogen -37.31781 -59.150391 Campylobacter_gracilis_RM3268 553220 Human, Oral (Gingivae) Obligate anaerobe NA NA NA Campylobacter_hominis_ATCC_BAA_381 360107 Human, Gut Microaerophilic Non-Pathogen NA NA Campylobacter_jejuni_RM1221 195099 Non-Human Microaerophilic Pathogen NA NA Campylobacter_jejuni_doylei_269_97 360109 Human Microaerophilic Pathogen NA NA Campylobacter_jejuni_ejuni_260_94 360108 Human Microaerophilic Pathogen -33.922461 18.416619 Campylobacter_jejuni_jejuni_81116 407148 Human Microaerophilic Pathogen NA NA Campylobacter_jejuni_jejuni_81_176 354242 Human Microaerophilic Pathogen NA NA Campylobacter_jejuni_jejuni_84_25 360110 Human Microaerophilic Pathogen NA NA Campylobacter_jejuni_jejuni_CF93_6 360111 Human Microaerophilic Pathogen NA NA Campylobacter_jejuni_jejuni_HB93_13 360112 Human, Gut Microaerophilic Pathogen NA NA Campylobacter_jejuni_jejuni_NCTC_11168 192222 Human, Gut Microaerophilic Pathogen NA NA Campylobacter_jejuni_subsp_jejuni_1336 683082 Non-Human Microaerophilic Pathogen NA NA Campylobacter_jejuni_subsp_jejuni_414 683083 Non-Human Microaerophilic Pathogen NA NA Campylobacter_jejuni_subsp_jejuni_IA3902 567106 Non-Human, Farm Microaerophilic Pathogen NA NA Campylobacter_lari_RM2100 306263 Human, Soil Microaerophilic Pathogen NA NA Campylobacter_rectus_RM3267_CCUG_20446 553218 Human, Oral (Gingivae) Microaerophilic Pathogen NA NA Campylobacter_showae_RM3277 553219 Human, Oral (Gingivae) Microaerophilic Pathogen 35.689488 139.691706 Campylobacter_upsaliensis_RM3195 306264 Human, Gut Microaerophilic Pathogen NA NA Candidatus_Accumulibacter_phosphatis_clade_IIA_str_UW_1 522306 Non-Human Aerobe NA 43.078418 -89.386482 Candidatus_Amoebophilus_asiaticus_5a2 452471 Non-Human NA NA NA NA Candidatus_Azobacteroides_pseudotrichonymphae_genomovar_CFP2 511995 Non-Human NA NA NA NA Candidatus_Blochmannia_floridanus 203907 Non-Human NA NA NA NA Candidatus_Blochmannia_pennsylvanicus_BPEN 291272 Non-Human NA Pathogen 41.5632 -70.6167 Candidatus_Carsonella_ruddii_PV 387662 Non-Human NA Non-Pathogen NA NA Candidatus_Desulforudis_audaxviator_MP104C 477974 Non-Human Anaerobe NA NA NA Candidatus_Endomicrobium_sp_Rs_D17 471821 Non-Human NA NA NA NA Candidatus_Hamiltonella_defensa_5AT_Acyrthosiphon_pisum 572265 Non-Human NA NA NA NA Candidatus_Hodgkinia_cicadicola_Dsem 573234 Non-Human NA NA 32.227832 -110.943784 Candidatus_Kuenenia_stuttgartiensis 174633 Non-Human NA NA NA NA Candidatus_Liberibacter_asiaticus_str_psy62 537021 Non-Human NA Pathogen NA NA Candidatus_Pelagibacter_sp_HTCC7211 439493 Non-Human, Marine (Other) Aerobe NA NA NA Candidatus_Pelagibacter_ubique_HTCC1002 314261 Non-Human, Marine (Other) Aerobe NA 44.651523 -124.053042 Candidatus_Pelagibacter_ubique_HTCC1062 335992 Non-Human, Marine (Other) Aerobe NA NA NA Candidatus_Phytoplasma_australiense 59748 Non-Human Aerobe Pathogen NA NA Candidatus_Phytoplasma_mali 37692 Non-Human Aerobe Pathogen 49.401929 8.680239 Candidatus_Protochlamydia_amoebophila_UWE25 264201 Human NA Pathogen NA NA Candidatus_Puniceispirillum_marinum_IMCC1322 488538 Non-Human, Marine (Other) NA NA NA NA Candidatus_Riesia_pediculicola_USDA 515618 Non-Human NA NA NA NA Candidatus_Ruthia_magnifica_Cm 413404 Non-Human, Marine (Other) NA Non-Pathogen NA NA Candidatus_Sulcia_muelleri_DMIN 641892 Non-Human NA NA NA NA Candidatus_Sulcia_muelleri_GWSS 444179 Non-Human NA NA NA NA Candidatus_Sulcia_muelleri_Hc 374675 Non-Human NA NA NA NA Candidatus_Sulcia_muelleri_SMDSEM 595499 Non-Human NA NA 32.222 -110.924 Candidatus_Vesicomyosocius_okutanii_HA 412965 Non-Human Anaerobe Non-Pathogen 35.2 139.5 Capnocytophaga_gingivalis_JCVIHMP016 553178 Human, Oral (Other) Facultative Pathogen NA NA Capnocytophaga_ochracea_DSM_7271 521097 Human, Oral (Other) Facultative Pathogen NA NA Capnocytophaga_sputigena_Capno 553177 Human, Oral (Gingivae) Facultative Pathogen NA NA Carboxydothermus_hydrogenoformans_Z_2901 246194 Non-Human Anaerobe NA 47.116667 145.850278 Cardiobacterium_hominis_ATCC_15826 638300 Human Aerobe NA NA NA Carnobacterium_sp_AT7 333990 Non-Human, Marine (Other) NA NA 52.885 -163 Catenibacterium_mitsuokai_DSM_15897 451640 Human, Gut Anaerobe NA NA NA Catenulispora_acidiphila_DSM_44928 479433 Non-Human, Soil Aerobe NA 45.640618 9.002209 Catonella_morbi_ATCC_51271 592026 Human, Oral (Gingivae) NA NA NA NA Caulobacter_crescentus_CB15 190650 Non-Human, Marine (Other), Soil Obligate aerobe NA NA NA Caulobacter_crescentus_NA1000 565050 Non-Human, Marine (Other), Soil Obligate aerobe NA NA NA Caulobacter_segnis_ATCC_21756 509190 Non-Human Aerobe NA NA NA Caulobacter_sp_K31 366602 Non-Human Aerobe NA NA NA Cellulomonas_flavigena_DSM_20109 446466 Non-Human, Soil Facultative NA NA NA Cellvibrio_japonicus_Ueda107 498211 Non-Human, Soil Aerobe NA NA NA Chelativorans_sp_BNC1 266779 Non-Human Aerobe Non-Pathogen NA NA Chitinophaga_pinensis_DSM_2588 485918 Non-Human Aerobe NA -27.424 153 Chlamydia_trachomatis_434_Bu 471472 Human NA Pathogen NA NA Chlamydia_trachomatis_6276 564416 Human NA Pathogen NA NA Chlamydia_trachomatis_6276s 564417 Human NA Pathogen NA NA Chlamydia_trachomatis_70 564418 Human NA Pathogen NA NA Chlamydia_trachomatis_70s 564419 Human NA Pathogen NA NA Chlamydia_trachomatis_A_HAR_13 315277 Human NA Pathogen NA NA Chlamydia_trachomatis_B_Jali20_OT 580049 Human NA Pathogen NA NA Chlamydia_trachomatis_D_EC 759363 Human NA Pathogen NA NA Chlamydia_trachomatis_D_LC 759364 Human NA Pathogen NA NA Chlamydia_trachomatis_D_UW_3_CX 272561 Human NA Pathogen NA NA Chlamydia_trachomatis_D_s_2923 573237 Human NA Pathogen NA NA Chlamydia_trachomatis_E_11023 707183 Human NA Pathogen NA NA Chlamydia_trachomatis_E_150 707184 Human NA Pathogen NA NA Chlamydia_trachomatis_G_11074 707187 Human NA Pathogen NA NA Chlamydia_trachomatis_G_11222 707186 Human, Urogenital (Other) NA Pathogen NA NA Chlamydia_trachomatis_G_9301 718219 Human NA Pathogen NA NA Chlamydia_trachomatis_G_9768 707185 Human NA Pathogen NA NA Chlamydia_trachomatis_L2b_UCH_1_proctitis 471473 Human, Urogenital (Other) NA Pathogen NA NA Chlamydophila_abortus_S26_3 218497 Non-Human, Farm NA Pathogen NA NA Chlamydophila_caviae_GPIC 227941 Non-Human NA Pathogen NA NA Chlamydophila_felis_Fe_C_56 264202 Non-Human NA Pathogen NA NA Chlamydophila_pneumoniae_AR39 115711 Human, Airways (Other) NA Pathogen NA NA Chlamydophila_pneumoniae_CWL029 115713 Human NA Pathogen NA NA Chlamydophila_pneumoniae_J138 138677 Human, Airways (Other) NA Pathogen NA NA Chlamydophila_pneumoniae_LPCoLN 406984 Human NA Pathogen NA NA Chlamydophila_pneumoniae_TW_183 182082 Human NA Pathogen NA NA Chlorobaculum_parvum_NCIB_8327 517417 Non-Human Facultative NA NA NA Chlorobaculum_tepidum_TLS 194439 Non-Human, Hydrothermal Obligate anaerobe NA NA NA Chlorobium_chlorochromatii_CaD3 340177 Non-Human Anaerobe NA NA NA Chlorobium_ferrooxidans_DSM_13031 377431 Non-Human Anaerobe NA NA NA Chlorobium_limicola_DSM_245 290315 Non-Human, Hydrothermal Anaerobe NA NA NA Chlorobium_luteolum_DSM_273 319225 Non-Human, Hydrothermal Anaerobe NA 61.75 6.816667 Chlorobium_phaeobacteroides_BS1 331678 Non-Human, Marine (Other) Facultative NA NA NA Chlorobium_phaeobacteroides_DSM_266 290317 Non-Human Facultative Non-Pathogen 60.025392 10.666437 Chlorobium_phaeovibrioides_DSM_265 290318 Non-Human Facultative NA NA NA Chloroflexus_aggregans_DSM_9485 326427 Non-Human, Hydrothermal Facultative NA NA NA Chloroflexus_aurantiacus_J_10_fl 324602 Non-Human, Hydrothermal Anaerobe NA 35.23968 139.04623 Chloroflexus_sp_Y_400_fl 480224 Non-Human NA NA 45.424979 -88.771304 Chloroherpeton_thalassium_ATCC_35110 517418 Non-Human Facultative NA NA NA Chromobacterium_violaceum_ATCC_12472 243365 Human, Soil Facultative Pathogen NA NA Chromohalobacter_salexigens_DSM_3043 290398 Non-Human Facultative Non-Pathogen NA NA Chryseobacterium_gleum_F93_ATCC_35910 525257 Human, Urogenital (Vaginal) Aerobe NA NA NA Chthoniobacter_flavus_Ellin428 497964 Non-Human, Soil Aerobe NA NA NA Citreicella_sp_SE45 501479 Non-Human, Marine (Other) NA NA NA NA Citrobacter_koseri_ATCC_BAA_895 290338 Human, Gut, Soil, Food Facultative Pathogen NA NA Citrobacter_rodentium_ICC168 637910 Non-Human Facultative Pathogen NA NA Citrobacter_youngae_ATCC_29220 500640 Human, Gut Facultative NA NA NA Citromicrobium_bathyomarinum_JL354 685035 Non-Human NA NA NA NA Clavibacter_michiganensis_michiganensis_NCPPB_382 443906 Non-Human Aerobe Pathogen NA NA Clavibacter_michiganensis_sepedonicus_ATCC_33113 31964 Non-Human Aerobe Pathogen NA NA Clostridiales_genomosp_BVAB3_str_UPII9_5 699246 Human, Urogenital (Vaginal) NA NA NA NA Clostridiales_sp_1_7_47_FAA 457421 Human, Gut NA NA NA NA Clostridium_acetobutylicum_ATCC_824 272562 Non-Human, Soil Obligate anaerobe NA 41.603221 -73.087749 Clostridium_asparagiforme_DSM_15981 518636 Human, Gut Obligate anaerobe NA NA NA Clostridium_bartlettii_DSM_16795 445973 Human, Gut Anaerobe NA NA NA Clostridium_beijerinckii_NCIMB_8052 290402 Non-Human, Soil Anaerobe Non-Pathogen NA NA Clostridium_bolteae_ATCC_BAA_613 411902 Human, Gut Anaerobe NA NA NA Clostridium_botulinum_A2_Kyoto_F 536232 Human, Marine (Other), Food Anaerobe Pathogen 35.011636 135.768029 Clostridium_botulinum_A3_Loch_Maree 498214 Human, Soil Anaerobe Pathogen NA NA Clostridium_botulinum_A_ATCC_19397 441770 Human, Soil Obligate anaerobe Pathogen NA NA Clostridium_botulinum_A_ATCC_3502 413999 Human, Soil Obligate anaerobe Pathogen NA NA Clostridium_botulinum_A_Hall 441771 Human, Soil Obligate anaerobe Pathogen 42.374554 -71.116818 Clostridium_botulinum_B1_Okra 498213 Human Anaerobe Pathogen NA NA Clostridium_botulinum_Ba4_657 515621 Human, Soil Obligate aerobe Pathogen NA NA Clostridium_botulinum_Bf 445336 Human, Food Obligate anaerobe Pathogen NA NA Clostridium_botulinum_C_Eklund 445337 Non-Human Obligate anaerobe Non-Pathogen NA NA Clostridium_botulinum_D_str_1873 592027 Human, Marine (Other), Food Anaerobe Pathogen NA NA Clostridium_botulinum_E1_str_BoNT_E_Beluga 536233 Human, Marine (Other), Food Anaerobe Pathogen NA NA Clostridium_botulinum_E3_Alaska_E43 508767 Human, Food Anaerobe Pathogen NA NA Clostridium_botulinum_F_Langeland 441772 Human Obligate anaerobe Pathogen 54.943172 10.775886 Clostridium_botulinum_F_str_230613 758678 Human Obligate anaerobe Pathogen NA NA Clostridium_botulinum_NCTC_2916 445335 Human, Food Obligate anaerobe Pathogen NA NA Clostridium_butyricum_5521 447214 Human, Food Anaerobe Pathogen NA NA Clostridium_butyricum_E4_str_BoNT_E_BL5262 632245 Human, Food Anaerobe Pathogen NA NA Clostridium_carboxidivorans_P7 536227 Non-Human Anaerobe NA 36.123175 -97.069644 Clostridium_cellulolyticum_H10 394503 Non-Human, Soil Anaerobe NA 48.6911 6.1823 Clostridium_cellulovorans_743B 573061 Non-Human, Soil Anaerobe NA NA NA Clostridium_difficile_630 272563 Human Obligate anaerobe Pathogen 47.3775 8.5396 Clostridium_difficile_ATCC_43255 499175 Human Anaerobe Pathogen NA NA Clostridium_difficile_CD196 645462 Non-Human NA NA NA NA Clostridium_difficile_CIP_107932 499176 Human, Urogenital (Other) Anaerobe Pathogen 49.128754 4.147545 Clostridium_difficile_NAP07 525258 Human, Gut Anaerobe Non-Pathogen NA NA Clostridium_difficile_NAP08 525259 Human, Gut Anaerobe Non-Pathogen NA NA Clostridium_difficile_QCD_23m63 499174 Human Anaerobe Pathogen NA NA Clostridium_difficile_QCD_37x79 479834 Human Obligate anaerobe Pathogen 42.982515 -81.253973 Clostridium_difficile_QCD_63q42 479831 Human Obligate anaerobe Pathogen NA NA Clostridium_difficile_QCD_66c26 455631 Human Obligate anaerobe Pathogen NA NA Clostridium_difficile_QCD_76w55 479832 Human Obligate anaerobe Pathogen 44.977482 -93.264351 Clostridium_difficile_QCD_97b34 479833 Human Obligate anaerobe Pathogen 47.576727 -52.701129 Clostridium_difficile_R20291 645463 Human, Gut Obligate anaerobe Pathogen 51.800473 -0.803289 Clostridium_hiranonis_DSM_13275 500633 Human, Gut Anaerobe NA NA NA Clostridium_hylemonae_DSM_15053 553973 Human, Gut Anaerobe Non-Pathogen NA NA Clostridium_kluyveri_DSM_555 431943 Non-Human Anaerobe Non-Pathogen 52.011899 4.360257 Clostridium_kluyveri_NBRC_12016 583346 Non-Human Anaerobe NA NA NA Clostridium_lentocellum_DSM_5427 642492 Non-Human Anaerobe NA 57.243 -2.686 Clostridium_leptum_DSM_753 428125 Human, Gut Anaerobe NA NA NA Clostridium_methylpentosum_R2_DSM_5476 537013 Human, Gut Obligate anaerobe NA NA NA Clostridium_novyi_NT 386415 Non-Human, Soil Anaerobe Non-Pathogen NA NA Clostridium_papyrosolvens_DSM_2782 588581 Non-Human Anaerobe NA 57.162143 -2.719417 Clostridium_perfringens_13 195102 Human, Soil Anaerobe Pathogen NA NA Clostridium_perfringens_ATCC_13124 195103 Human, Soil Obligate anaerobe Pathogen NA NA Clostridium_perfringens_B_ATCC_3626 451754 Non-Human, Soil, Farm Anaerobe Pathogen NA NA Clostridium_perfringens_CPE_F4969 451756 Human, Soil Anaerobe Pathogen NA NA Clostridium_perfringens_C_JGS1495 445334 Human, Soil Anaerobe Pathogen NA NA Clostridium_perfringens_D_JGS1721 488537 Human, Soil Anaerobe Pathogen NA NA Clostridium_perfringens_E_JGS1987 451755 Human, Soil Anaerobe Pathogen NA NA Clostridium_perfringens_NCTC_8239 451757 Human, Soil Anaerobe Pathogen NA NA Clostridium_perfringens_SM101 289380 Human Anaerobe Pathogen NA NA Clostridium_phytofermentans_ISDg 357809 Non-Human, Soil Anaerobe NA 42.404699 -72.308526 Clostridium_scindens_ATCC_35704 411468 Human, Gut Anaerobe NA 40.756054 -73.986951 Clostridium_sp_7_2_43FAA 457396 Human, Gut Anaerobe NA NA NA Clostridium_sp_L2_50 411489 Human, Gut Anaerobe Non-Pathogen NA NA Clostridium_sp_M62_1 411486 Human, Gut Anaerobe Non-Pathogen NA NA Clostridium_sp_SS2_1 411484 Human, Gut Anaerobe Non-Pathogen NA NA Clostridium_spiroforme_DSM_1552 428126 Human, Gut Anaerobe NA NA NA Clostridium_sporogenes_ATCC_15579 471871 Human, Gut Anaerobe NA NA NA Clostridium_tetani_E88 212717 Human Anaerobe Pathogen NA NA Clostridium_thermocellum_ATCC_27405 203119 Non-Human, Soil Anaerobe Non-Pathogen NA NA Clostridium_thermocellum_DSM_2360 572545 Non-Human Anaerobe NA NA NA Collinsella_aerofaciens_ATCC_25986 411903 Human, Gut Anaerobe Non-Pathogen NA NA Collinsella_intestinalis_DSM_13280 521003 Human, Gut Anaerobe NA NA NA Collinsella_stercoris_DSM_13279 445975 Human, Gut Anaerobe NA NA NA Colwellia_psychrerythraea_34H 167879 Non-Human Facultative NA NA NA Comamonas_testosteroni_KF_1 399795 Non-Human Aerobe NA NA NA Conexibacter_woesei_DSM_14684 469383 Non-Human, Soil Obligate aerobe NA 45.64 9.002 Congregibacter_litoralis_KT71 314285 Non-Human, Marine (Heterotroph) Microaerophilic NA 54.25 7.933333 Coprococcus_comes 470146 Human, Gut Anaerobe Non-Pathogen NA NA Coprococcus_eutactus_ATCC_27759 411474 Human, Gut Anaerobe Non-Pathogen NA NA Coprothermobacter_proteolyticus_DSM_5265 309798 Non-Human Anaerobe NA NA NA Coraliomargarita_akajimensis_DSM_45221 583355 Non-Human, Marine (Other) Obligate aerobe NA 39.537 141.121 Corynebacterium_accolens_ATCC_49725 525260 Human, Airways (Other) Anaerobe NA NA NA Corynebacterium_ammoniagenes_DSM_20306 649754 Human, Gut Anaerobe NA NA NA Corynebacterium_amycolatum_SK46 553204 Human, Skin Aerobe NA NA NA Corynebacterium_aurimucosum_ATCC_700975 548476 Human, Urogenital (Vaginal) Facultative NA NA NA Corynebacterium_diphtheriae_NCTC_13129 257309 Human, Airways (Other) Facultative Pathogen NA NA Corynebacterium_efficiens_YS_314 196164 Human, Skin Facultative NA 35.5 139.5 Corynebacterium_genitalium_ATCC_33030 585529 Human, Urogenital (Other) Facultative NA NA NA Corynebacterium_glucuronalyticum_ATCC_51867 548477 Human, Urogenital (Other) Facultative NA NA NA Corynebacterium_glucuronolyticum_ATCC_51866 548478 Human, Urogenital (Other) Facultative NA 48.582 7.743 Corynebacterium_glutamicum_ATCC_13032_Bielefeld 196627 Non-Human, Soil Facultative NA NA NA Corynebacterium_glutamicum_R 340322 Non-Human, Soil Facultative NA NA NA Corynebacterium_jeikeium_ATCC_43734 525262 Human, Urogenital (Other) Facultative NA NA NA Corynebacterium_jeikeium_K411 306537 Human Facultative Pathogen NA NA Corynebacterium_kroppenstedtii_DSM_44385 645127 Human, Airways (Other) Anaerobe NA NA NA Corynebacterium_lipophiloflavum_DSM_44291 525263 Human, Urogenital (Vaginal) NA NA NA NA Corynebacterium_matruchotii_ATCC_14266 553207 Human, Oral (Other) Aerobe NA NA NA Corynebacterium_matruchotii_ATCC_33806 566549 Human, Oral (Gingivae) Aerobe NA NA NA Corynebacterium_pseudogenitalium_ATCC_33035 525264 Human, Urogenital (Other) NA NA NA NA Corynebacterium_striatum_ATCC_6940 525268 Human, Urogenital (Other) Anaerobe NA NA NA Corynebacterium_tuberculostearicum_SK141 553206 Human, Skin Anaerobe NA NA NA Corynebacterium_urealyticum_DSM_7109 504474 Human Anaerobe Pathogen NA NA Coxiella_burnetii_CbuG_Q212 434923 Human Facultative Pathogen NA NA Coxiella_burnetii_CbuK_Q154 434924 Human Facultative Pathogen NA NA Coxiella_burnetii_RSA_331 360115 Human Facultative Pathogen NA NA Coxiella_burnetii_RSA_493 227377 Human, Soil Facultative Pathogen NA NA Croceibacter_atlanticus_HTCC2559 216432 Non-Human, Marine (Other) Aerobe NA NA NA Crocosphaera_watsonii_WH_8501 165597 Non-Human NA NA NA NA Cronobacter_sakazakii_ATCC_BAA_894 290339 Human Facultative Pathogen NA NA Cronobacter_turicensis 413502 Human Facultative NA 47.369 8.538 Cryptobacterium_curtum_DSM_15641 469378 Human, Oral (Other) Obligate anaerobe NA NA NA Cupriavidus_metallidurans_CH34 266264 Non-Human, Soil Aerobe Pathogen NA NA Cupriavidus_taiwanensis 164546 Non-Human Facultative NA 22.549506 120.61999 Cyanobium_sp_PCC_7001 180281 Non-Human, Marine (Other) Facultative NA 40.74179 -72.915 Cyanothece_sp_ATCC_51142 43989 Non-Human Facultative NA 27.816743 -97.074951 Cyanothece_sp_CCY_0110 391612 Non-Human, Marine (Other) Aerobe NA -6.1425 39.45778 Cyanothece_sp_PCC_7424 65393 Non-Human Anaerobe NA NA NA Cyanothece_sp_PCC_7425 395961 Non-Human Anaerobe NA NA NA Cyanothece_sp_PCC_7822 497965 Non-Human Aerobe NA 20.237556 84.270018 Cyanothece_sp_PCC_8801 41431 Non-Human Aerobe NA NA NA Cyanothece_sp_PCC_8802 395962 Non-Human Aerobe NA 22.760875 120.637579 Cylindrospermopsis_raciborskii_CS_505 533240 Non-Human NA NA NA NA Cytophaga_hutchinsonii_ATCC_33406 269798 Non-Human, Soil Aerobe Non-Pathogen 37.7539 126.4882 Dechloromonas_aromatica_RCB 159087 Non-Human Facultative NA NA NA Deferribacter_desulfuricans_SSM1 639282 Non-Human Anaerobe NA NA NA Dehalococcoides_ethenogenes_195 243164 Non-Human Anaerobe NA NA NA Dehalococcoides_sp_BAV1 216389 Non-Human Anaerobe NA 44.4267 -83.3323 Dehalococcoides_sp_CBDB1 255470 Non-Human Anaerobe NA NA NA Dehalococcoides_sp_GT 633145 Non-Human Anaerobe NA NA NA Dehalococcoides_sp_VS 311424 Non-Human Anaerobe NA NA NA Dehalogenimonas_lykanthroporepellens_BL_DC_9 552811 Non-Human Anaerobe NA NA NA Deinococcus_deserti_VCD115 546414 Non-Human, Soil Aerobe Pathogen NA NA Deinococcus_geothermalis_DSM_11300 319795 Non-Human, Hydrothermal Aerobe Pathogen 40.833568 14.162399 Deinococcus_radiodurans_R1 243230 Non-Human, Soil Aerobe Pathogen NA NA Delftia_acidovorans_SPH_1 398578 Non-Human, Soil Aerobe NA NA NA Denitrovibrio_acetiphilus_DSM_12809 522772 Non-Human, Marine (Other) Obligate anaerobe NA NA NA Desulfatibacillum_alkenivorans_AK_01 439235 Non-Human Anaerobe NA 40.437746 -74.20347 Desulfitobacterium_hafniense_DCB_2 272564 Non-Human Anaerobe NA NA NA Desulfitobacterium_hafniense_Y51 138119 Non-Human, Soil Anaerobe NA NA NA Desulfobacterium_autotrophicum_HRM2_DSM_3382 177437 Non-Human Anaerobe NA NA NA Desulfococcus_oleovorans_Hxd3 96561 Non-Human Anaerobe NA NA NA Desulfohalobium_retbaense_DSM_5692 485915 Non-Human Obligate anaerobe NA 14.83 -17.23 Desulfomicrobium_baculatum_DSM_4028 525897 Non-Human Obligate anaerobe NA NA NA Desulfonatronospira_thiodismutans_ASO3_1 555779 Non-Human Anaerobe NA 52.504582 82.999935 Desulfotalea_psychrophila_LSv54 177439 Non-Human, Marine (Other) Anaerobe NA NA NA Desulfotomaculum_acetoxidans_DSM_771 485916 Non-Human, Soil Obligate anaerobe NA 51.533 9.933 Desulfotomaculum_reducens_MI_1 349161 Non-Human Anaerobe Non-Pathogen 38.067222 -122.25 Desulfovibrio_aespoeensis_Aspo_2 643562 Non-Human, Soil Obligate anaerobe NA 56.115502 15.537785 Desulfovibrio_desulfuricans_G20 207559 Non-Human Anaerobe NA NA NA Desulfovibrio_desulfuricans_desulfuricans_ATCC_27774 525146 Non-Human, Farm Anaerobe NA NA NA Desulfovibrio_magneticus_RS_1 573370 Non-Human Anaerobe NA 34.230511 135.170808 Desulfovibrio_piger_ATCC_29098 411464 Human, Gut Anaerobe Non-Pathogen NA NA Desulfovibrio_salexigens_DSM_2638 526222 Non-Human Anaerobe NA NA NA Desulfovibrio_sp_FW1012B 644968 Non-Human, Soil Obligate anaerobe NA NA NA Desulfovibrio_vulgaris_Miyazaki_F 883 Non-Human, Soil Anaerobe NA NA NA Desulfovibrio_vulgaris_RCH1 573059 Non-Human, Soil Obligate anaerobe NA NA NA Desulfovibrio_vulgaris_vulgaris_DP4 391774 Non-Human Anaerobe Non-Pathogen NA NA Desulfovibrio_vulgaris_vulgaris_Hildenborough 882 Non-Human, Soil Anaerobe NA 51.213219 0.249551 Desulfurivibrio_alkaliphilus_AHT2 589865 Non-Human Anaerobe NA 30.418502 30.333323 Desulfuromonas_acetoxidans_DSM_684 281689 Non-Human Anaerobe NA NA NA Dethiobacter_alkaliphilus_AHT1 555088 Non-Human Anaerobe NA NA NA Dethiosulfovibrio_peptidovorans_SEBR_4207_DSM_11002 469381 Non-Human Obligate anaerobe NA -5.05 11.783 Dialister_invisus_DSM_15470 592028 Human, Oral (Other) Anaerobe NA NA NA Dichelobacter_nodosus_VCS1703A 246195 Non-Human Anaerobe Pathogen NA NA Dickeya_dadantii_Ech586 590409 Non-Human Facultative Pathogen NA NA Dickeya_dadantii_Ech703 579405 Non-Human Facultative NA NA NA Dickeya_zeae_Ech1591 561229 Non-Human Facultative NA NA NA Dictyoglomus_thermophilum_H_6_12 309799 Non-Human, Hydrothermal Anaerobe NA 32.789827 130.741667 Dictyoglomus_turgidum_DSM_6724 515635 Non-Human, Hydrothermal Anaerobe NA 54.517335 159.973068 Dinoroseobacter_shibae_DFL_12 398580 Non-Human Aerobe NA 35.648504 139.763947 Dokdonia_donghaensis_MED134 313590 Non-Human, Marine (Other) NA NA 41.66667 2.8 Dorea_formicigenerans_ATCC_27755 411461 Human, Gut Anaerobe Non-Pathogen NA NA Dorea_longicatena_DSM_13814 411462 Human, Gut Anaerobe Non-Pathogen NA NA Dyadobacter_fermentans_NS_114_DSM_18053 471854 Non-Human, Soil Aerobe NA 43.1 -89.4 Edwardsiella_ictaluri_93_146 634503 Non-Human Facultative Pathogen NA NA Edwardsiella_tarda_ATCC_23685 500638 Human, Gut Facultative Pathogen NA NA Edwardsiella_tarda_EIB202 498217 Human Facultative Pathogen 37.463 121.447 Eggerthella_lenta_DSM_2243 479437 Human Anaerobe Pathogen NA NA Ehrlichia_canis_Jake 269484 Non-Human Aerobe Pathogen NA NA Ehrlichia_chaffeensis_Arkansas 205920 Human NA Pathogen NA NA Ehrlichia_chaffeensis_Sapulpa 332415 Human NA Pathogen NA NA Ehrlichia_ruminantium_Gardel 302409 Non-Human, Farm NA Pathogen NA NA Ehrlichia_ruminantium_Welgevonden_CIRAD 254945 Non-Human NA Pathogen NA NA Eikenella_corrodens_ATCC_23834 546274 Human, Oral (Other) Anaerobe Pathogen 34.021575 -81.037104 Elusimicrobium_minutum_Pei191 445932 Non-Human Anaerobe NA NA NA Endoriftia_persephone_Hot96_1_Hot96_2 394104 Non-Human NA NA NA NA Enhydrobacter_aerosaccus_SK60 553217 Human, Skin Facultative NA NA NA Enterobacter_cancerogenus_ATCC_35316 500639 Human, Gut Facultative NA NA NA Enterobacter_cloacae_subsp_cloacae_ATCC_13047 716541 Human Aerobe Pathogen NA NA Enterobacter_sp_638 399742 Non-Human Facultative NA NA NA Enterococcus_casseliflavus_EC10 565654 Human Facultative Pathogen NA NA Enterococcus_casseliflavus_EC20 565655 Human Facultative Pathogen NA NA Enterococcus_casseliflavus_EC30 565652 Human Facultative Pathogen NA NA Enterococcus_faecalis_ARO1_DG 565651 Non-Human Facultative NA NA NA Enterococcus_faecalis_ATCC_29200 525271 Human, Urogenital (Other) Aerobe NA NA NA Enterococcus_faecalis_ATCC_4200 565642 Human Facultative NA NA NA Enterococcus_faecalis_CH188 565644 Human Facultative NA 42.35892 -71.05781 Enterococcus_faecalis_D6 565650 Non-Human, Farm Facultative NA NA NA Enterococcus_faecalis_DS5 565643 Human Facultative NA NA NA Enterococcus_faecalis_E1Sol 565647 Human Facultative NA NA NA Enterococcus_faecalis_Fly1 565649 Non-Human Facultative NA NA NA Enterococcus_faecalis_HH22 491075 Human, Urogenital (Other) Facultative Pathogen NA NA Enterococcus_faecalis_HIP11704 565646 Human Facultative NA NA NA Enterococcus_faecalis_JH1 565648 Human Facultative NA NA NA Enterococcus_faecalis_Merz96 565645 Human Facultative NA NA NA Enterococcus_faecalis_OG1RF 474186 Human, Gut Facultative Pathogen NA NA Enterococcus_faecalis_PC4_1 791161 Human, Gut Facultative NA NA NA Enterococcus_faecalis_R712 699186 Human Facultative NA NA NA Enterococcus_faecalis_S613 699185 Human Facultative NA NA NA Enterococcus_faecalis_T1 565636 Human Facultative NA NA NA Enterococcus_faecalis_T11 565640 Human, Urogenital (Other) Facultative NA 26.212401 127.680932 Enterococcus_faecalis_T2 565637 Human, Urogenital (Other) Facultative NA 43.062096 141.354376 Enterococcus_faecalis_T3 565638 Human, Urogenital (Other) Facultative NA 43.062096 141.354376 Enterococcus_faecalis_T8 565639 Human Facultative NA NA NA Enterococcus_faecalis_TUSoD_Ef11 553209 Human, Oral (Other) Facultative NA NA NA Enterococcus_faecalis_TX0104 491074 Human, Gut Aerobe Pathogen NA NA Enterococcus_faecalis_TX1332 525278 Human, Gut Aerobe NA NA NA Enterococcus_faecalis_V583 226185 Human, Gut Facultative Pathogen 38.634788 -90.263207 Enterococcus_faecalis_X98 565641 Human, Gut Facultative NA NA NA Enterococcus_faecium_1_141_733 565659 Human, Gut, Soil Facultative Pathogen NA NA Enterococcus_faecium_1_230_933 565656 Human Facultative Pathogen NA NA Enterococcus_faecium_1_231_408 565661 Human Facultative Pathogen NA NA Enterococcus_faecium_1_231_410 565660 Human Facultative Pathogen NA NA Enterococcus_faecium_1_231_501 565658 Human, Gut, Soil Facultative Pathogen NA NA Enterococcus_faecium_1_231_502 565657 Human Facultative Pathogen NA NA Enterococcus_faecium_C68 565664 Human Facultative Pathogen NA NA Enterococcus_faecium_Com12 565662 Human, Gut, Soil Facultative Pathogen NA NA Enterococcus_faecium_Com15 565663 Human, Gut Facultative Pathogen NA NA Enterococcus_faecium_D344SRF 565665 Human Facultative Pathogen NA NA Enterococcus_faecium_DO 333849 Human, Gut Aerobe NA 29.710489 -95.39907 Enterococcus_faecium_E1039 645663 Human Facultative Pathogen NA NA Enterococcus_faecium_E1071 535205 Human, Gut Facultative Pathogen NA NA Enterococcus_faecium_E1162 535206 Human Facultative Pathogen NA NA Enterococcus_faecium_E1636 544875 Human Facultative Pathogen NA NA Enterococcus_faecium_E1679 546340 Human Facultative Pathogen NA NA Enterococcus_faecium_E980 529885 Human Facultative Pathogen NA NA Enterococcus_faecium_TC_6 565666 Human Facultative Pathogen NA NA Enterococcus_faecium_TX1330 525279 Human, Gut Facultative NA NA NA Enterococcus_faecium_U0317 547468 Human, Urogenital (Other) Facultative Pathogen 52.091262 5.122748 Enterococcus_gallinarum_EG2 565653 Human, Soil Facultative Pathogen NA NA Epulopiscium_sp_N_t_morphotype_B 420336 Non-Human Anaerobe NA NA NA Erwinia_amylovora_ATCC_49946 716540 Non-Human Facultative Pathogen 40.714 -74.005 Erwinia_amylovora_CFBP1430 665029 Non-Human Facultative Pathogen NA NA Erwinia_pyrifoliae_DSM_12163 644651 Non-Human Facultative NA NA NA Erwinia_pyrifoliae_Ep1_96 634499 Non-Human Facultative Pathogen NA NA Erwinia_tasmaniensis_Et1_99 465817 Non-Human Facultative Non-Pathogen NA NA Erysipelothrix_rhusiopathiae_ATCC_19414 525280 Human, Skin Aerobe NA NA NA Erysipelotrichaceae_bacterium_5_2_54FAA 552396 Human, Gut NA NA NA NA Erythrobacter_litoralis_HTCC2594 314225 Non-Human, Marine (Other) Aerobe NA NA NA Erythrobacter_sp_NAP1 237727 Non-Human, Marine (Other) Aerobe NA 39.6 -72.45 Escherichia_coli_042 216592 Human, Gut Facultative Pathogen -12.093 -77.046 Escherichia_coli_101_1 358709 Human Facultative Pathogen NA NA Escherichia_coli_53638 344610 Human Facultative NA NA NA Escherichia_coli_55989 585055 Human Facultative Pathogen NA NA Escherichia_coli_83972 525281 Human, Urogenital (Other) Facultative NA NA NA Escherichia_coli_APEC_O1 405955 Non-Human Facultative Pathogen NA NA Escherichia_coli_ATCC_8739 481805 Human, Gut Facultative Non-Pathogen NA NA Escherichia_coli_B088 550672 Human Facultative NA NA NA Escherichia_coli_B185 550676 Human Facultative NA NA NA Escherichia_coli_B354 550677 Human Facultative NA NA NA Escherichia_coli_BL21_DE3 469008 Non-Human Facultative Non-Pathogen NA NA Escherichia_coli_BW2952 595496 Non-Human Facultative Non-Pathogen NA NA Escherichia_coli_B_str_REL606 413997 Non-Human Facultative Non-Pathogen NA NA Escherichia_coli_CFT073 199310 Human Facultative Pathogen 39.294255 -76.614275 Escherichia_coli_DH1 536056 Non-Human Facultative NA NA NA Escherichia_coli_E110019 340186 Human, Gut Facultative NA NA NA Escherichia_coli_E22 340185 Human Facultative NA NA NA Escherichia_coli_E24377A 331111 Human, Gut Facultative Pathogen NA NA Escherichia_coli_ED1a 585397 Human, Gut Facultative Non-Pathogen NA NA Escherichia_coli_FVEC1412 656380 Non-Human NA Pathogen NA NA Escherichia_coli_HS 331112 Human, Gut Facultative Non-Pathogen NA NA Escherichia_coli_IAI1 585034 Human Facultative Pathogen NA NA Escherichia_coli_IAI39 585057 Human Facultative Pathogen NA NA Escherichia_coli_IHE3034 714962 Human, Gut Facultative Non-Pathogen NA NA Escherichia_coli_K12_DH10B 316385 Human, Gut Facultative Non-Pathogen NA NA Escherichia_coli_O103_H2_str_12009 585395 Human Facultative Pathogen NA NA Escherichia_coli_O111_H_str_11128 585396 Human Facultative Pathogen NA NA Escherichia_coli_O127_H6_E2348_69 574521 Human Facultative Pathogen NA NA Escherichia_coli_O157_H7_EC4024 444454 Human Facultative NA NA NA Escherichia_coli_O157_H7_EC4042 444449 Human Facultative NA NA NA Escherichia_coli_O157_H7_EC4045 444448 Human Facultative NA NA NA Escherichia_coli_O157_H7_EC4076 444453 Human Facultative NA NA NA Escherichia_coli_O157_H7_EC4113 444452 Human Facultative NA NA NA Escherichia_coli_O157_H7_EC4115 444450 Human Facultative NA NA NA Escherichia_coli_O157_H7_EC4196 444451 Human Facultative NA NA NA Escherichia_coli_O157_H7_EC4206 444447 Human Facultative NA NA NA Escherichia_coli_O157_H7_EC4401 478004 Human Facultative NA NA NA Escherichia_coli_O157_H7_EC4486 478005 Human Facultative NA NA NA Escherichia_coli_O157_H7_EC4501 478006 Human Facultative NA NA NA Escherichia_coli_O157_H7_EC508 478007 Human, Gut Facultative NA NA NA Escherichia_coli_O157_H7_EC869 478008 Human Facultative NA NA NA Escherichia_coli_O157_H7_EDL933 155864 Human, Gut Facultative Pathogen NA NA Escherichia_coli_O157_H7_Sakai 386585 Human, Gut Facultative Pathogen 36.459511 138.175003 Escherichia_coli_O157_H7_TW14588 502346 Human Facultative Pathogen NA NA Escherichia_coli_O157_H7_str_FRIK2000 637388 Non-Human, Farm Facultative NA NA NA Escherichia_coli_O157_H7_str_FRIK966 570506 Non-Human, Farm Facultative NA NA NA Escherichia_coli_O157_H7_str_TW14359 544404 Human Facultative Pathogen NA NA Escherichia_coli_O26_H11_str_11368 573235 Human, Gut Facultative NA NA NA Escherichia_coli_O55_H7_str_CB9615 701177 Human, Gut Facultative Pathogen NA NA Escherichia_coli_S88 585035 Human Facultative Pathogen NA NA Escherichia_coli_SE11 409438 Human, Gut Facultative Non-Pathogen NA NA Escherichia_coli_SE15 431946 Human, Gut NA NA NA NA Escherichia_coli_SMS_3_5 439855 Human Facultative Pathogen 32.838433 -79.941044 Escherichia_coli_UMN026 585056 Human Facultative Pathogen NA NA Escherichia_coli_UTI89 364106 Human, Gut Facultative Pathogen NA NA Escherichia_coli_W3110 316407 Non-Human Facultative Non-Pathogen NA NA Escherichia_coli_str_K_12_substr_MG1655 511145 Human, Gut Facultative Non-Pathogen NA NA Escherichia_fergusonii_UMN026_ATCC_35469 585054 Human Facultative Non-Pathogen NA NA Escherichia_sp_1_1_43 457400 Human, Gut Facultative NA NA NA Escherichia_sp_4_1_40B 457401 Human, Gut Facultative NA NA NA Ethanoligenens_harbinense_YUAN_3 663278 Non-Human Obligate anaerobe NA NA NA Eubacterium_biforme_DSM_3989 518637 Human, Gut Anaerobe NA NA NA Eubacterium_dolichum_DSM_3991 428127 Human, Gut Anaerobe NA NA NA Eubacterium_eligens_ATCC_27750 515620 Human, Gut, Soil Anaerobe NA NA NA Eubacterium_hallii_DSM_3353 411469 Human, Gut Anaerobe Non-Pathogen NA NA Eubacterium_rectale_ATCC_33656 515619 Human, Gut Anaerobe NA NA NA Eubacterium_saphenum_ATCC_49989 592031 Human, Oral (Other) Anaerobe NA NA NA Eubacterium_siraeum_DSM_15702 428128 Human, Gut Anaerobe NA NA NA Eubacterium_ventriosum_ATCC_27560 411463 Human, Gut Anaerobe Non-Pathogen NA NA Exiguobacterium_sibiricum_255_15 262543 Non-Human Facultative NA 70 158 Exiguobacterium_sp_AT1b 360911 Non-Human Facultative NA 44.376262 -110.690383 Faecalibacterium_prausnitzii_A2_165 411483 Human, Gut Anaerobe Non-Pathogen NA NA Faecalibacterium_prausnitzii_M21_2 411485 Human, Gut Anaerobe Non-Pathogen NA NA Fervidobacterium_nodosum_Rt17_B1 381764 Non-Human, Hydrothermal Anaerobe NA NA NA Fibrobacter_succinogenes_subsp_succinogenes_S85 59374 Non-Human Anaerobe NA NA NA Filifactor_alocis_ATCC_35896 546269 Human, Oral (Gingivae) Anaerobe NA NA NA Finegoldia_magna_ATCC_29328 334413 Human, Gut Anaerobe Pathogen NA NA Finegoldia_magna_ATCC_53516 525282 Human, Urogenital (Vaginal) Anaerobe NA NA NA Flavobacteria_MS024_2A 487796 Non-Human Aerobe NA 43.849784 -69.6266 Flavobacteria_MS024_3C 487797 Non-Human Aerobe NA 43.849784 -69.6266 Flavobacteria_bacterium_BAL38 391598 Non-Human Aerobe NA 63.51611 19.81583 Flavobacteriaceae_bacterium_3519_10 531844 Non-Human NA NA NA NA Flavobacteriales_bacterium_ALC_1 391603 Non-Human, Marine (Heterotroph) Aerobe NA 32.85 -117.25 Flavobacteriales_bacterium_HTCC2170 313603 Non-Human, Marine (Heterotroph) Aerobe NA 44.655 -124.064 Flavobacterium_johnsoniae_UW101 376686 Non-Human, Soil Aerobe NA NA NA Flavobacterium_psychrophilum_JIP02_86 402612 Non-Human Aerobe Pathogen NA NA Francisella_novicida_FTE 545422 Human Aerobe Pathogen NA NA Francisella_novicida_FTG 563990 Human Aerobe Pathogen NA NA Francisella_philomiragia_philomiragia_ATCC_25017 484022 Human Aerobe Pathogen 41.585 -112.0843 Francisella_philomiragia_subsp_philomiragia_ATCC_25015 539329 Human Aerobe Pathogen NA NA Francisella_tularensis_holarctica 119857 Human Aerobe Pathogen NA NA Francisella_tularensis_holarctica_FSC200 351581 Human Aerobe Pathogen NA NA Francisella_tularensis_holarctica_FTA 458234 Human Aerobe Pathogen NA NA Francisella_tularensis_holarctica_OSU18 393011 Human Aerobe Pathogen 36.4595 -97.179 Francisella_tularensis_mediasiatica_FSC147 441952 Human Aerobe Pathogen NA NA Francisella_tularensis_novicida_U112 401614 Human Aerobe Non-Pathogen NA NA Francisella_tularensis_subsp_holarctica_URFT1 445226 Human Aerobe Pathogen NA NA Francisella_tularensis_subsp_tularensis_NE061598 510831 Human Aerobe Pathogen NA NA Francisella_tularensis_tularensis_FSC_198 393115 Human Aerobe Pathogen NA NA Francisella_tularensis_tularensis_SCHU_S4 177416 Human Aerobe Pathogen NA NA Francisella_tularensis_tularensis_WY96_3418 418136 Human, Skin Aerobe Pathogen NA NA Frankia_alni_ACN14a 326424 Non-Human, Soil Aerobe Non-Pathogen 48.148312 -69.717963 Frankia_sp_CcI3 106370 Non-Human, Soil Aerobe Non-Pathogen NA NA Frankia_sp_EAN1pec 298653 Non-Human, Soil Aerobe Non-Pathogen 39.689 -84.168 Frankia_sp_EUN1f 102897 Non-Human, Soil Aerobe Non-Pathogen NA NA Frankia_sp_EuI1c 298654 Non-Human, Soil Aerobe Non-Pathogen NA NA Frankia_symbiont_of_Datisca_glomerata 656024 Non-Human, Soil Aerobe Non-Pathogen NA NA Fulvimarina_pelagi_HTCC2506 314231 Non-Human, Marine (Other) Aerobe NA NA NA Fusobacterium_gonidiaformans_ATCC_25563 469615 Human, Gut Anaerobe NA NA NA Fusobacterium_mortiferum_ATCC_9817 469616 Human, Gut Anaerobe NA NA NA Fusobacterium_nucleatum_nucleatum_ATCC_25586 190304 Human Anaerobe Pathogen NA NA Fusobacterium_nucleatum_polymorphum_ATCC_10953 393480 Human, Oral (Other) Anaerobe Pathogen NA NA Fusobacterium_nucleatum_subsp_nucleatum_ATCC_23726 525283 Human, Urogenital (Vaginal) Anaerobe Pathogen NA NA Fusobacterium_nucleatum_vincentii_ATCC_49256 209882 Human, Oral (Other) Anaerobe Pathogen NA NA Fusobacterium_periodonticum_ATCC_33693 546275 Human, Oral (Other) Anaerobe Pathogen NA NA Fusobacterium_sp_1_1_41FAA 469621 Human, Gut Anaerobe NA NA NA Fusobacterium_sp_2_1_31 469599 Human, Gut Anaerobe NA NA NA Fusobacterium_sp_3_1_27 469602 Human, Gut Anaerobe NA NA NA Fusobacterium_sp_3_1_33 469603 Human, Gut Anaerobe NA NA NA Fusobacterium_sp_3_1_36A2 469604 Human, Gut Anaerobe NA NA NA Fusobacterium_sp_3_1_5R 469605 Human, Gut Anaerobe NA NA NA Fusobacterium_sp_4_1_13 469606 Human, Gut Anaerobe NA NA NA Fusobacterium_sp_7_1 457405 Human, Gut Anaerobe NA NA NA Fusobacterium_sp_D11 556264 Human, Gut Anaerobe NA NA NA Fusobacterium_sp_D12 556263 Human, Gut Anaerobe NA NA NA Fusobacterium_ulcerans_ATCC_49185 469617 Human, Gut Anaerobe NA NA NA Fusobacterium_varium_ATCC_27725 469618 Human, Gut Anaerobe NA NA NA Gallionella_ferruginea_ES_2 395494 Non-Human Aerobe NA NA NA Gardnerella_vaginalis_409_05 553190 Human, Urogenital (Vaginal) Obligate anaerobe NA NA NA Gardnerella_vaginalis_AMD 682147 Human, Urogenital (Vaginal) Obligate anaerobe NA NA NA Gardnerella_vaginalis_ATCC_14019 525284 Human, Urogenital (Vaginal) Anaerobe NA NA NA Gemella_haemolysans_ATCC_10379 546270 Human, Oral (Other) Facultative NA NA NA Gemmata_obscuriglobus_UQM_2246 214688 Non-Human Aerobe NA NA NA Gemmatimonas_aurantiaca_T_27T 379066 Non-Human Aerobe NA NA NA Geobacillus_kaustophilus_HTA426 235909 Non-Human, Marine (Other) Aerobe NA NA NA Geobacillus_sp_C56_T3 691437 Non-Human Facultative NA NA NA Geobacillus_sp_WCH70 471223 Non-Human Facultative NA NA NA Geobacillus_sp_Y412MC10 481743 Non-Human Facultative NA NA NA Geobacillus_sp_Y412MC52 550542 Non-Human, Hydrothermal Facultative NA 44.376262 -110.690383 Geobacillus_sp_Y412MC61 544556 Non-Human Facultative NA 44.376262 -110.690383 Geobacillus_sp_Y4_1MC1 581103 Non-Human Facultative NA 44.376262 -110.690383 Geobacillus_thermodenitrificans_NG80_2 420246 Non-Human Facultative NA NA NA Geobacillus_thermoglucosidasius_C56_YS93 634956 Non-Human Facultative NA NA NA Geobacter_bemidjiensis_Bem 404380 Non-Human, Soil Anaerobe NA 47.482959 -94.879704 Geobacter_lovleyi_SZ 398767 Non-Human, Soil Anaerobe NA 37.566535 126.977969 Geobacter_metallireducens_GS_15 269799 Non-Human Anaerobe NA 38.9863 -77.0535 Geobacter_sp_FRC_32 316067 Non-Human, Soil Anaerobe NA NA NA Geobacter_sp_M18 443143 Non-Human Anaerobe NA NA NA Geobacter_sp_M21 443144 Non-Human, Soil Anaerobe NA 39.538845 -107.783363 Geobacter_sulfurreducens_PCA 243231 Non-Human, Soil Anaerobe NA 35.191213 -97.441347 Geobacter_uraniumreducens_Rf4 351605 Non-Human, Soil Anaerobe NA 39.538845 -107.783363 Geodermatophilus_obscurus_DSM_43160 526225 Non-Human, Soil Aerobe NA 36.48 -116.5 Gloeobacter_violaceus_PCC_7421 251221 Non-Human, Soil NA NA NA NA Gluconacetobacter_diazotrophicus_PAl_5 272568 Non-Human Aerobe NA NA NA Gluconacetobacter_hansenii_ATCC_23769 714995 Non-Human Aerobe NA NA NA Gluconobacter_oxydans_621H 290633 Non-Human Aerobe NA NA NA Gordonia_bronchialis_DSM_43247 526226 Human, Airways (Other) Obligate aerobe Pathogen NA NA Gramella_forsetii_KT0803 411154 Non-Human, Marine (Other) Aerobe NA NA NA Granulibacter_bethesdensis_CGDNIH1 391165 Human NA Pathogen 38.9867 -77.1007 Granulicatella_adiacens_ATCC_49175 638301 Human, Oral (Other) NA NA NA NA Granulicatella_elegans_ATCC_700633 626369 Human, Oral (Other) Anaerobe NA NA NA Grimontia_hollisae_CIP_101886 675812 Human, Gut, Marine (Heterotroph) Facultative NA 38.978181 -76.49404 Haemophilus_ducreyi_35000HP 233412 Human, Skin Anaerobe Pathogen NA NA Haemophilus_influenzae_22_1_21 374927 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Haemophilus_influenzae_22_4_21 375063 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Haemophilus_influenzae_3655 375177 Human Facultative Pathogen NA NA Haemophilus_influenzae_6P18H1 521004 Human, Airways (Other) Facultative Pathogen NA NA Haemophilus_influenzae_7P49H1 521005 Human, Airways (Other) Facultative Pathogen NA NA Haemophilus_influenzae_86_028NP 281310 Human Facultative Pathogen 39.953032 -82.978495 Haemophilus_influenzae_NT127 656913 Human Facultative Pathogen NA NA Haemophilus_influenzae_PittEE 374930 Human Facultative Pathogen 40.438423 -80.001933 Haemophilus_influenzae_PittGG 374931 Human Facultative Pathogen 40.438423 80.001933 Haemophilus_influenzae_PittHH 374932 Human Facultative Pathogen NA NA Haemophilus_influenzae_PittII 374933 Human Facultative Pathogen 40.438423 -80.001933 Haemophilus_influenzae_R2846 262727 Human Facultative Pathogen NA NA Haemophilus_influenzae_R2866 262728 Human Facultative Pathogen NA NA Haemophilus_influenzae_R3021 375432 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Haemophilus_influenzae_RdAW 656912 Human Facultative Pathogen NA NA Haemophilus_influenzae_Rd_KW20 71421 Human, Airways (Other) Facultative Pathogen NA NA Haemophilus_parasuis_29755 456298 Non-Human Facultative Pathogen NA NA Haemophilus_parasuis_SH0165 557723 Non-Human, Farm Facultative Pathogen NA NA Hahella_chejuensis_KCTC_2396 349521 Non-Human Aerobe NA 33.378561 126.566191 Haliangium_ochraceum_DSM_14365 502025 Non-Human, Marine (Other) Obligate aerobe NA 35.259 139.629 Halorhodospira_halophila_SL1 349124 Non-Human Anaerobe NA NA NA Halothermothrix_orenii_H_168 373903 Non-Human Anaerobe NA NA NA Halothiobacillus_neapolitanus_c2 555778 Non-Human Aerobe NA NA NA Helicobacter_acinonychis_Sheeba 382638 Non-Human Aerobe Pathogen NA NA Helicobacter_bilis_ATCC_43879 613026 Human, Gut Aerobe NA 43.062071 -89.400846 Helicobacter_canadensis_MIT_98_5491 537970 Human, Gut Microaerophilic Pathogen NA NA Helicobacter_cinaedi_CCUG_18818 537971 Human, Gut Microaerophilic NA NA NA Helicobacter_hepaticus_ATCC_51449 235279 Non-Human Aerobe Pathogen NA NA Helicobacter_mustelae_12198 679897 Non-Human Aerobe Pathogen NA NA Helicobacter_pullorum_MIT_98_5489 537972 Human, Gut Microaerophilic NA NA NA Helicobacter_pylori 210 Human Aerobe Pathogen NA NA Helicobacter_pylori_26695 85962 Human, Gut Aerobe Pathogen NA NA Helicobacter_pylori_51 290847 Human Aerobe Pathogen NA NA Helicobacter_pylori_98_10 544405 Human, Gut Aerobe Pathogen NA NA Helicobacter_pylori_B128 544406 Human, Gut Aerobe Pathogen NA NA Helicobacter_pylori_B38 592205 Human Aerobe Pathogen NA NA Helicobacter_pylori_G27 563041 Human, Gut Aerobe Pathogen NA NA Helicobacter_pylori_HPAG1 357544 Human, Gut Aerobe Pathogen NA NA Helicobacter_pylori_HPKX_438_AG0C1 499171 Human, Gut Aerobe Pathogen NA NA Helicobacter_pylori_HPKX_438_CA4C1 499172 Human, Gut Aerobe Pathogen NA NA Helicobacter_pylori_J99 85963 Human, Gut Aerobe Pathogen NA NA Helicobacter_pylori_P12 570508 Human, Gut Aerobe Pathogen NA NA Helicobacter_pylori_Shi470 512562 Human, Gut Aerobe Pathogen -12.211258 -76.908227 Helicobacter_pylori_v225d 637913 Human, Gut Microaerophilic NA NA NA Helicobacter_winghamensis_ATCC_BAA_430 556267 Human, Gut Aerobe NA NA NA Heliobacterium_modesticaldum_Ice1 498761 Non-Human, Hydrothermal, Soil Anaerobe NA NA NA Herminiimonas_arsenicoxydans 204773 Non-Human Anaerobe Non-Pathogen NA NA Herpetosiphon_aurantiacus_ATCC_23779 316274 Non-Human Aerobe NA 45.040746 -94.41882 Hirschia_baltica_ATCC_49814 582402 Non-Human, Marine (Other) Aerobe NA NA NA Histophilus_somni_129PT 205914 Human Facultative Pathogen NA NA Histophilus_somni_2336 228400 Human Facultative Pathogen NA NA Hoeflea_phototrophica_DFL_43 411684 Non-Human, Marine (Other) Aerobe NA 54.13333 7.86667 Holdemania_filiformis_VPI_J1_31B_1_DSM_12042 545696 Human, Gut Anaerobe NA NA NA Hydrogenivirga_sp_128_5_R1_1 392423 Non-Human Anaerobe NA -20.752222 176.184722 Hydrogenobacter_thermophilus_TK_6 608538 Non-Human Aerobe NA 34.856 138.938 Hydrogenobaculum_sp_SN 547146 Non-Human Aerobe NA NA NA Hydrogenobaculum_sp_Y04AAS1 380749 Non-Human Aerobe NA 44.376262 -110.690383 Hyphomicrobium_denitrificans_ATCC_51888 582899 Non-Human Aerobe NA NA NA Hyphomonas_neptunium_ATCC_15444 228405 Non-Human, Marine (Other) Aerobe Non-Pathogen NA NA Idiomarina_loihiensis_L2TR 283942 Non-Human, Marine (Other) Aerobe NA NA NA Janibacter_sp_HTCC2649 313589 Non-Human, Marine (Other) NA NA NA NA Jannaschia_sp_CCS1 290400 Non-Human, Marine (Heterotroph) Obligate aerobe NA 38.3121 -123.0661 Janthinobacterium_sp_Marseille 375286 Non-Human NA NA NA NA Jonesia_denitrificans_DSM_20603 471856 Non-Human, Farm Facultative NA NA NA Jonquetella_anthropi_E3_33_E1 645512 Human, Oral (Other) Obligate anaerobe NA NA NA Kangiella_koreensis_DSM_16069 523791 Non-Human, Marine (Other) Facultative NA 33.245043 126.409526 Kineococcus_radiotolerans_SRS30216 266940 Non-Human Aerobe Pathogen 33.283615 -81.726394 Kingella_oralis_UB_38_ATCC_51147 629741 Human, Oral (Other) NA NA NA NA Klebsiella_pneumoniae_NTUH_K2044 484021 Human, Soil Facultative Pathogen NA NA Klebsiella_pneumoniae_pneumoniae_MGH_78578 272620 Human, Soil Facultative Pathogen NA NA Klebsiella_pneumoniae_subsp_rhinoscleromatis_ATCC_13884 667127 Human, Airways (Other) NA NA NA NA Klebsiella_variicola_At_22 640131 Non-Human NA NA NA NA Kocuria_rhizophila_DC2201 378753 Non-Human, Marine (Other) Aerobe NA NA NA Kordia_algicida_OT_1 391587 Non-Human, Marine (Other) Aerobe NA 35.16667 128.58333 Koribacter_versatilis_Ellin345 204669 Non-Human, Soil Aerobe Non-Pathogen NA NA Kosmotoga_olearia_TBF_19_5_1 521045 Non-Human NA NA NA NA Kribbella_flavida_DSM_17836 479435 Non-Human, Soil Obligate aerobe NA 39.9 116.4 Kytococcus_sedentarius_DSM_20547 478801 Non-Human, Marine (Other) Obligate aerobe Pathogen 32.718834 -117.163841 Labrenzia_aggregata_IAM_12614 384765 Non-Human, Marine (Other) Aerobe NA NA NA Labrenzia_alexandrii_DFL_11 244592 Non-Human, Marine (Other) Aerobe NA 54.13333 7.86667 Lactobacillus_acidophilus_ATCC_4796 525306 Human, Gut Microaerophilic NA NA NA Lactobacillus_acidophilus_NCFM 272621 Human, Gut Facultative NA NA NA Lactobacillus_amylolyticus_DSM_11664 585524 Human, Gut Microaerophilic NA NA NA Lactobacillus_antri_DSM_16041 525309 Human, Gut Microaerophilic NA 65.852983 23.155277 Lactobacillus_brevis_ATCC_367 387344 Non-Human, Soil Aerobe NA NA NA Lactobacillus_brevis_gravesensis_ATCC_27305 525310 Human, Gut Microaerophilic NA NA NA Lactobacillus_buchneri_ATCC_11577 525318 Human, Gut Microaerophilic NA NA NA Lactobacillus_casei_ATCC_334 321967 Human, Gut Facultative NA NA NA Lactobacillus_casei_casei_BL23 543734 Human, Gut Facultative NA NA NA Lactobacillus_coleohominis_101_4_CHN 575594 Human, Urogenital (Vaginal) Facultative NA NA NA Lactobacillus_crispatus_125_2_CHN 575595 Human, Gut, Urogenital (Vaginal) Microaerophilic NA NA NA Lactobacillus_crispatus_214_1 679188 Human, Urogenital (Vaginal) Microaerophilic NA NA NA Lactobacillus_crispatus_JV_V01 491076 Human, Urogenital (Vaginal) Microaerophilic NA NA NA Lactobacillus_crispatus_MV_1A_US 575596 Human, Urogenital (Vaginal) Facultative NA NA NA Lactobacillus_crispatus_MV_3A_US 575597 Human, Urogenital (Vaginal) Facultative NA NA NA Lactobacillus_crispatus_ST1 748671 Human, Urogenital (Vaginal) Facultative NA NA NA Lactobacillus_delbrueckii_bulgaricus_ATCC_11842 390333 Human, Gut Facultative NA NA NA Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA_365 321956 Non-Human Facultative NA NA NA Lactobacillus_fermentum_28_3_CHN 575599 Human, Urogenital (Vaginal) Facultative NA NA NA Lactobacillus_fermentum_ATCC_14931 525325 Human, Gut Microaerophilic NA NA NA Lactobacillus_fermentum_IFO_3956 334390 Human, Gut Facultative NA NA NA Lactobacillus_gasseri_202_4 630527 Human, Urogenital (Vaginal) Microaerophilic NA NA NA Lactobacillus_gasseri_224_1 679196 Human, Urogenital (Vaginal) Microaerophilic NA NA NA Lactobacillus_gasseri_ATCC_33323 324831 Human, Gut Facultative NA NA NA Lactobacillus_gasseri_JV_V03 525326 Human, Urogenital (Vaginal) Microaerophilic NA NA NA Lactobacillus_helveticus_DPC_4571 405566 Non-Human Facultative NA NA NA Lactobacillus_helveticus_DSM_20075 585520 Human, Gut Microaerophilic NA NA NA Lactobacillus_iners_DSM_13335 525328 Human, Urogenital (Other) Facultative NA NA NA Lactobacillus_jensenii_115_3_CHN 575605 Human, Urogenital (Vaginal) Facultative NA NA NA Lactobacillus_jensenii_269_3 596325 Human, Urogenital (Vaginal) Microaerophilic NA NA NA Lactobacillus_jensenii_27_2_CHN 575606 Human, Urogenital (Vaginal) Microaerophilic NA NA NA Lactobacillus_jensenii_JV_V16 525329 Human, Urogenital (Vaginal) Microaerophilic NA NA NA Lactobacillus_jensenii_SJ_7A_US 575607 Human, Urogenital (Vaginal) Microaerophilic NA NA NA Lactobacillus_johnsonii_ATCC_33200 525330 Human, Urogenital (Other) Microaerophilic NA NA NA Lactobacillus_johnsonii_FI9785 633699 Human, Urogenital (Vaginal) Microaerophilic NA NA NA Lactobacillus_johnsonii_NCC_533 257314 Human, Gut Facultative NA NA NA Lactobacillus_paracasei_8700_02_00 537973 Human, Gut Microaerophilic NA NA NA Lactobacillus_paracasei_ATCC_25302 525337 Human, Gut Microaerophilic NA NA NA Lactobacillus_plantarum_ATCC_14917 525338 Human, Gut Microaerophilic NA NA NA Lactobacillus_plantarum_JDM1 644042 Human, Gut Microaerophilic NA NA NA Lactobacillus_plantarum_WCFS1 220668 Human, Oral (Other) Facultative NA NA NA Lactobacillus_reuteri_100_23 349123 Human, Gut Facultative Non-Pathogen NA NA Lactobacillus_reuteri_CF48_3A 525341 Human, Gut Microaerophilic NA NA NA Lactobacillus_reuteri_F275_JCM1112 557433 Human, Gut Facultative Non-Pathogen NA NA Lactobacillus_reuteri_MM2_3 585517 Human, Gut Microaerophilic Non-Pathogen NA NA Lactobacillus_reuteri_MM4_1 548485 Human, Gut Microaerophilic Non-Pathogen NA NA Lactobacillus_reuteri_SD2112_ATCC_55730 491077 Human, Gut Microaerophilic Non-Pathogen NA NA Lactobacillus_rhamnosus_GG 568703 Human, Gut Microaerophilic Non-Pathogen NA NA Lactobacillus_rhamnosus_HN001 486408 Human, Gut Facultative Non-Pathogen NA NA Lactobacillus_rhamnosus_LMS2_1 525361 Human, Gut Facultative NA NA NA Lactobacillus_rhamnosus_Lc_705 568704 Human, Gut Microaerophilic Non-Pathogen NA NA Lactobacillus_ruminis_E_194e_ATCC_25644 525362 Human, Gut Microaerophilic Non-Pathogen NA NA Lactobacillus_sakei_carnosus_DSM_15831 525363 Human, Gut Microaerophilic NA NA NA Lactobacillus_sakei_sakei_23K 314315 Non-Human Facultative Non-Pathogen NA NA Lactobacillus_salivarius_salivarius_UCC118 362948 Human, Gut Facultative Non-Pathogen NA NA Lactobacillus_ultunensis_DSM_16047 525365 Human, Gut Microaerophilic NA NA NA Lactococcus_lactis_cremoris_MG1363 416870 Non-Human Facultative Non-Pathogen NA NA Lactococcus_lactis_cremoris_SK11 272622 Non-Human Facultative Non-Pathogen NA NA Lactococcus_lactis_lactis_Il1403 272623 Non-Human Facultative NA NA NA Lactococcus_lactis_subsp_lactis_KF147 684738 Non-Human Facultative NA NA NA Laribacter_hongkongensis_HLHK9 557598 Human, Gut Anaerobe Pathogen 22.396428 114.109497 Lawsonia_intracellularis_PHE_MN1_00 363253 Non-Human, Farm Facultative Pathogen NA NA Leeuwenhoekiella_blandensis_MED217 398720 Non-Human, Marine (Other) Aerobe NA 41.66667 2.8 Legionella_drancourtii_LLAP12 658187 Non-Human, Soil Aerobe Pathogen NA NA Legionella_longbeachae_D_4968 638315 Human, Soil Aerobe Pathogen NA NA Legionella_longbeachae_NSW150 661367 Human, Soil Aerobe Pathogen NA NA Legionella_pneumophila_2300_99_Alcoy 423212 Human, Soil Aerobe Pathogen 38.7054 -0.478 Legionella_pneumophila_Corby 400673 Human, Soil Aerobe Pathogen NA NA Legionella_pneumophila_Lens 297245 Human, Soil Aerobe Pathogen NA NA Legionella_pneumophila_Paris 297246 Human, Soil Aerobe Pathogen NA NA Legionella_pneumophila_pneumophila_Philadelphia_1 272624 Human, Soil Aerobe Pathogen 39.951639 -75.163808 Leifsonia_xyli_xyli_CTCB07 281090 Non-Human Aerobe Pathogen NA NA Lentisphaera_araneosa_HTCC2155 313628 Non-Human, Marine (Other) Aerobe NA NA NA Leptospira_biflexa_Patoc_1_Ames 355278 Non-Human, Soil Aerobe Pathogen 42.022864 -93.626792 Leptospira_biflexa_Patoc_1_Paris 456481 Non-Human, Soil Aerobe Non-Pathogen NA NA Leptospira_borgpetersenii_sv_Hardjo_bovis_JB197 355277 Non-Human, Soil Aerobe Pathogen NA NA Leptospira_borgpetersenii_sv_Hardjo_bovis_L550 355276 Human, Soil Aerobe Pathogen NA NA Leptospira_interrogans_sv_Copenhageni_Fiocruz_L1_130 267671 Human, Soil Aerobe Pathogen NA NA Leptospira_interrogans_sv_Lai_56601 189518 Non-Human, Soil Aerobe Pathogen NA NA Leptothrix_cholodnii_SP_6 395495 Non-Human, Soil Aerobe NA 42.444589 -76.499268 Leptotrichia_buccalis_DSM_1135 523794 Human, Oral (Gingivae) Anaerobe Pathogen NA NA Leptotrichia_goodfellowii_F0264 596323 Human, Oral (Other) Anaerobe NA NA NA Leptotrichia_hofstadii_F0254 634994 Human, Oral (Other) Anaerobe NA NA NA Leuconostoc_citreum_KM20 349519 Non-Human Facultative NA NA NA Leuconostoc_kimchii_IMSNU11154 762051 Non-Human Facultative NA NA NA Leuconostoc_mesenteroides_cremoris_ATCC_19254 586220 Human, Gut Aerobe NA NA NA Leuconostoc_mesenteroides_mesenteroides_ATCC_8293 203120 Non-Human Facultative Pathogen NA NA Limnobacter_sp_MED105 391597 Non-Human, Marine (Other) NA NA 32.81 34.69 Listeria_grayi_DSM_20601 525367 Human, Gut Aerobe NA NA NA Listeria_innocua_Clip11262 272626 Non-Human, Soil Facultative Non-Pathogen NA NA Listeria_monocytogenes_08_5578 653938 Human, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_08_5923 637381 Human, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_10403S 393133 Non-Human, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_1_2a_F6854 267409 Non-Human, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_4b_F2365 265669 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_4b_H7858 267410 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_EGD_e 169963 Non-Human, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_F6900 393128 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_FSL_F2_515 393116 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_FSL_J1_175 393118 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_FSL_J1_194 393117 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_FSL_J1_208 393119 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_FSL_J2_003 393120 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_FSL_J2_064 393122 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_FSL_J2_071 393121 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_FSL_N1_017 393123 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_FSL_N3_165 393124 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_FSL_R2_503 393125 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_FSL_R2_561 393126 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_Finland_1988 393127 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_HCC23 552536 Non-Human, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_HPB2262 401650 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_J0161 393130 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_J2818 393131 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_monocytogenes_LO28 393132 Human, Gut, Soil, Food Facultative Pathogen NA NA Listeria_seeligeri_serovar_1_2b_str_SLCC3954 683837 Non-Human Facultative Non-Pathogen NA NA Listeria_welshimeri_sv_6b_SLCC5334 386043 Non-Human, Soil, Food Facultative Non-Pathogen NA NA Loktanella_vestfoldensis_SKA53 314232 Non-Human, Marine (Other) Aerobe NA 58.94083 11.07944 Lutiella_nitroferrum_2002 279714 Non-Human NA NA NA NA Lyngbya_sp_PCC_8106 313612 Non-Human, Marine (Other) NA NA 53.71278 8.13611 Lysinibacillus_sphaericus_C3_41 444177 Non-Human, Soil Aerobe NA NA NA Macrococcus_caseolyticus_JCSC5402 458233 Non-Human Facultative NA NA NA Magnetococcus_sp_MC_1 156889 Non-Human, Marine (Other) Facultative Non-Pathogen 41.476883 -71.426451 Magnetospirillum_magneticum_AMB_1 342108 Non-Human Aerobe NA 35.689488 139.691706 Magnetospirillum_magnetotacticum_MS_1 272627 Non-Human, Marine (Heterotroph) Aerobe NA NA NA Mannheimia_haemolytica_PHL213 272629 Non-Human Facultative Pathogen NA NA Mannheimia_haemolytica_serotype_A2_str_BOVINE 669262 Non-Human Facultative Pathogen NA NA Mannheimia_haemolytica_serotype_A2_str_OVINE 669261 Non-Human Facultative Pathogen NA NA Maricaulis_maris_MCS10 394221 Non-Human Facultative Non-Pathogen 47.609106 -122.569354 Marinobacter_algicola_DG893 443152 Non-Human, Marine (Heterotroph) Aerobe NA 36 123 Marinobacter_aquaeolei_VT8 351348 Non-Human, Marine (Heterotroph) Facultative Non-Pathogen 10.345 107.084 Marinobacter_sp_ELB17 270374 Non-Human, Marine (Heterotroph) Facultative NA -77 -168 Marinomonas_sp_MED121 314277 Non-Human, Marine (Other) Aerobe NA 41.66667 2.8 Marinomonas_sp_MWYL1 400668 Non-Human, Marine (Other) Aerobe NA 52.9509 0.9329 Mariprofundus_ferrooxydans_PV_1 314345 Non-Human, Marine (Other) Aerobe NA 18.95 -155.25 Megasphaera_genomosp_type_1_str_28L 699218 Human, Urogenital (Vaginal) NA NA NA NA Meiothermus_ruber_DSM_1279 504728 Non-Human Obligate aerobe NA NA NA Meiothermus_silvanus_DSM_9946 526227 Non-Human, Hydrothermal Aerobe NA 41.38 -8.32 Mesoplasma_florum_L1 265311 Non-Human Facultative Non-Pathogen NA NA Mesorhizobium_loti_MAFF303099 266835 Non-Human Aerobe NA 36.565 139.883 Mesorhizobium_opportunistum_WSM2075 536019 Non-Human Aerobe NA -31.530408 116.947875 Methylacidiphilum_infernorum_V4 481448 Non-Human, Hydrothermal Aerobe NA NA NA Methylibium_petroleiphilum_PM1 420662 Non-Human Facultative NA 34.052187 -118.243425 Methylobacillus_flagellatus_KT 265072 Non-Human Aerobe NA 55.755786 37.617633 Methylobacterium_chloromethanicum_CM4 440085 Non-Human, Soil Aerobe NA 47.800499 13.04441 Methylobacterium_extorquens_AM1 272630 Non-Human Aerobe NA NA NA Methylobacterium_extorquens_PA1 419610 Non-Human Facultative NA NA NA Methylobacterium_nodulans_ORS_2060 460265 Non-Human Aerobe NA 14.7031 -17.4221 Methylobacterium_populi_BJ001 441620 Non-Human Aerobe NA NA NA Methylobacterium_radiotolerans_JCM_2831 426355 Non-Human Aerobe NA NA NA Methylobacterium_sp_4_46 426117 Non-Human Aerobe NA NA NA Methylocella_silvestris_BL2 395965 Non-Human Aerobe NA 50.814788 8.769239 Methylococcus_capsulatus_Bath 243233 Non-Human Aerobe NA NA NA Methylophaga_thiooxidans_DMS010 637616 Non-Human, Marine (Other) Aerobe NA NA NA Methylophilales_bacterium_HTCC2181 383631 Non-Human, Marine (Other) NA NA 44.650749 -124.064441 Methylosinus_trichosporium_OB3b 595536 Non-Human, Soil NA NA NA NA Methylotenera_mobilis_JLW8 583345 Non-Human Aerobe NA NA NA Methylotenera_sp_301 666681 Non-Human NA NA NA NA Methylovorus_sp_SIP3_4 582744 Non-Human Aerobe NA NA NA Micrococcus_luteus_SK58 596312 Human, Skin Aerobe NA NA NA Microcoleus_chthonoplastes_PCC_7420 118168 Non-Human, Marine (Other) NA NA 41.51667 -70.68333 Microcystis_aeruginosa_NIES_843 449447 Human Aerobe Pathogen 36.040278 140.394167 Micromonospora_aurantiaca_ATCC_27029 644283 Non-Human, Soil Aerobe NA NA NA Micromonospora_sp_L5 648999 Non-Human, Soil Aerobe NA 20.673 -101.354 Microscilla_marina_ATCC_23134 313606 Non-Human, Marine (Other) Aerobe NA NA NA Mitsuokella_multacida_DSM_20544 500635 Human, Gut Anaerobe NA NA NA Mobiluncus_curtisii_ATCC_43063 548479 Human, Urogenital (Vaginal) Anaerobe NA NA NA Mobiluncus_mulieris_28_1 596328 Human, Urogenital (Vaginal) Anaerobe NA NA NA Mobiluncus_mulieris_ATCC_35243 585199 Human, Urogenital (Vaginal) Anaerobe NA NA NA Moorella_thermoacetica_ATCC_39073 264732 Non-Human Anaerobe NA NA NA Moraxella_catarrhalis_RH4 749219 Human, Airways (Other) Aerobe Pathogen NA NA Moritella_sp_PE36 58051 Non-Human, Marine (Heterotroph) NA NA 33 -122 Mycobacterium_abscessus 36809 Human, Skin Aerobe Pathogen NA NA Mycobacterium_avium_104 243243 Human, Soil Aerobe Pathogen NA NA Mycobacterium_avium_paratuberculosis_K_10 262316 Non-Human, Farm Aerobe Pathogen NA NA Mycobacterium_avium_subsp_avium_ATCC_25291 553481 Non-Human Aerobe Pathogen NA NA Mycobacterium_bovis_AF2122_97 233413 Non-Human, Farm Aerobe Pathogen NA NA Mycobacterium_bovis_BCG_Pasteur_1173P2 410289 Human Aerobe Pathogen NA NA Mycobacterium_bovis_BCG_Tokyo_172 561275 Human Aerobe Pathogen NA NA Mycobacterium_gilvum_PYR_GCK 350054 Non-Human, Soil Aerobe NA NA NA Mycobacterium_intracellulare_ATCC_13950 487521 Human Aerobe Pathogen NA NA Mycobacterium_kansasii_ATCC_12478 557599 Human Aerobe Pathogen NA NA Mycobacterium_leprae_Br4923 561304 Human, Skin Aerobe Pathogen NA NA Mycobacterium_leprae_TN 272631 Human Aerobe Pathogen 11.127123 78.656894 Mycobacterium_marinum_M 216594 Human Aerobe Pathogen 37.763385 -122.458081 Mycobacterium_parascrofulaceum_ATCC_BAA_614 525368 Human, Urogenital (Vaginal) Aerobe NA NA NA Mycobacterium_smegmatis_MC2_155 246196 Human Aerobe Pathogen NA NA Mycobacterium_sp_JLS 164757 Non-Human, Soil Aerobe Non-Pathogen 48.38828 115.55581 Mycobacterium_sp_KMS 189918 Non-Human, Soil Aerobe Non-Pathogen 48.38828 115.55581 Mycobacterium_sp_MCS 164756 Non-Human, Soil Aerobe Non-Pathogen 48.38828 -115.55581 Mycobacterium_tuberculosis_210 164513 Human Aerobe Pathogen NA NA Mycobacterium_tuberculosis_CDC1551 83331 Human Aerobe Pathogen NA NA Mycobacterium_tuberculosis_EAS054 520140 Human Aerobe Pathogen NA NA Mycobacterium_tuberculosis_F11 336982 Human Aerobe Pathogen NA NA Mycobacterium_tuberculosis_H37Ra 419947 Human, Airways (Other) Aerobe Pathogen NA NA Mycobacterium_tuberculosis_H37Rv 83332 Human, Airways (Other) Aerobe Pathogen NA NA Mycobacterium_tuberculosis_KZN_1435 478434 Human Aerobe Pathogen -28.530554 30.895824 Mycobacterium_tuberculosis_KZN_V2475 663887 Human Aerobe Pathogen -24.798703 31.435543 Mycobacterium_ulcerans_Agy99 362242 Human, Skin Aerobe Pathogen NA NA Mycobacterium_vanbaalenii_PYR_1 350058 Non-Human Aerobe NA 28.304381 -97.03125 Mycoplasma_agalactiae 2110 Non-Human Facultative Pathogen NA NA Mycoplasma_agalactiae_PG2 347257 Non-Human Facultative Pathogen NA NA Mycoplasma_alligatoris_A21JP2 747682 Non-Human Facultative Pathogen NA NA Mycoplasma_arthritidis_158L3_1 243272 Human Facultative Pathogen NA NA Mycoplasma_capricolum_capricolum_ATCC_27343 340047 Non-Human, Farm Facultative Pathogen NA NA Mycoplasma_conjunctivae 45361 Non-Human, Farm Facultative Pathogen NA NA Mycoplasma_crocodyli_MP145 512564 Non-Human Facultative Pathogen -17.829 31.053 Mycoplasma_gallisepticum_str_F 708616 Non-Human Facultative Pathogen NA NA Mycoplasma_gallisepticum_str_R_high 710128 Non-Human Facultative Pathogen NA NA Mycoplasma_genitalium_G37 243273 Human, Urogenital (Other) Facultative Pathogen NA NA Mycoplasma_hominis 2098 Human, Gut Facultative Pathogen NA NA Mycoplasma_hyopneumoniae_232 295358 Non-Human Facultative Pathogen NA NA Mycoplasma_hyopneumoniae_7448 262722 Non-Human, Farm Facultative Pathogen -27.051537 -52.082512 Mycoplasma_hyopneumoniae_J 262719 Non-Human Facultative Non-Pathogen NA NA Mycoplasma_mycoides_mycoides_SC_PG1 272632 Non-Human Facultative Pathogen NA NA Mycoplasma_mycoides_subsp_capri_str_GM12_clone_deltatypeIIIres 436113 Non-Human Anaerobe Pathogen NA NA Mycoplasma_penetrans_HF_2 272633 Human Facultative Pathogen NA NA Mycoplasma_pneumoniae_M129 272634 Human, Airways (Other) Facultative Pathogen NA NA Mycoplasma_pulmonis_UAB_CTIP 272635 Non-Human Facultative Pathogen NA NA Mycoplasma_synoviae_53 262723 Non-Human Facultative Pathogen -12.616181 -47.883649 Myxococcus_xanthus_DK_1622 246197 Non-Human, Soil Obligate aerobe Non-Pathogen NA NA Nakamurella_multipartita_DSM_44233 479431 Non-Human Aerobe NA NA NA Natranaerobius_thermophilus_JW_NM_WN_LF 457570 Non-Human Anaerobe NA 30.325278 30.407222 Nautilia_profundicola_Am_H 598659 Non-Human Obligate anaerobe NA 12.801944 -103.934444 Neisseria_cinerea_ATCC_14685 546262 Human, Airways (Nasopharynx) Aerobe NA NA NA Neisseria_elongata_subsp_glycolytica_ATCC_29315 546263 Human, Airways (Nasopharynx) Aerobe NA NA NA Neisseria_flavescens_NRL30031_H210 546264 Human, Airways (Other) Aerobe NA NA NA Neisseria_flavescens_SK114 596320 Human, Skin Aerobe NA NA NA Neisseria_gonorrhoeae_1291 528345 Human Aerobe NA NA NA Neisseria_gonorrhoeae_35_02 528346 Human Aerobe NA NA NA Neisseria_gonorrhoeae_DGI18 528347 Human Aerobe NA NA NA Neisseria_gonorrhoeae_DGI2 528348 Human Aerobe NA NA NA Neisseria_gonorrhoeae_F62 528351 Human Aerobe NA NA NA Neisseria_gonorrhoeae_FA19 528352 Human Aerobe NA NA NA Neisseria_gonorrhoeae_FA6140 528353 Human Aerobe NA NA NA Neisseria_gonorrhoeae_FA_1090 242231 Human Aerobe Pathogen NA NA Neisseria_gonorrhoeae_MS11 528354 Human Aerobe NA NA NA Neisseria_gonorrhoeae_NCCP11945 521006 Human, Urogenital (Vaginal) Aerobe Pathogen NA NA Neisseria_gonorrhoeae_PID1 528355 Human, Urogenital (Other) Aerobe NA NA NA Neisseria_gonorrhoeae_PID18 528356 Human, Urogenital (Other) Aerobe NA NA NA Neisseria_gonorrhoeae_PID24_1 528357 Human, Urogenital (Other) Aerobe NA NA NA Neisseria_gonorrhoeae_PID332 528358 Human, Urogenital (Other) Aerobe NA NA NA Neisseria_gonorrhoeae_SK_92_679 528359 Human Aerobe NA NA NA Neisseria_gonorrhoeae_SK_93_1035 528360 Human Aerobe NA NA NA Neisseria_lactamica_ATCC_23970 546265 Human, Airways (Nasopharynx) Aerobe NA NA NA Neisseria_meningitidis_053442 374833 Human Aerobe Pathogen NA NA Neisseria_meningitidis_8013 604162 Human Aerobe Pathogen NA NA Neisseria_meningitidis_FAM18 272831 Human Aerobe Pathogen NA NA Neisseria_meningitidis_MC58 122586 Human Aerobe Pathogen NA NA Neisseria_meningitidis_Z2491 122587 Human Aerobe Pathogen NA NA Neisseria_meningitidis_alpha14 662598 Human Aerobe Pathogen NA NA Neisseria_mucosa_M26_ATCC_25996 546266 Human, Airways (Nasopharynx) Aerobe NA NA NA Neisseria_polysaccharea_ATCC_43768 546267 Human, Airways (Other) Aerobe NA NA NA Neisseria_sicca_ATCC_29256 547045 Human, Airways (Nasopharynx) Aerobe NA NA NA Neisseria_subflava_NJ9703 546268 Human, Oral (Other) Aerobe NA NA NA Neorickettsia_risticii_str_Illinois 434131 Non-Human, Farm Aerobe Pathogen NA NA Neorickettsia_sennetsu_Miyayama 222891 Human Aerobe Pathogen NA NA Nisaea_sp_BAL199 331869 Non-Human, Marine (Other) NA NA 58.58778 18.24667 Nitratiruptor_sp_SB155_2 387092 Non-Human, Marine (Other) Anaerobe NA 27.783333 126.883333 Nitrobacter_hamburgensis_X14 323097 Non-Human, Soil Aerobe NA NA NA Nitrobacter_sp_Nb_311A 314253 Non-Human, Marine (Other), Soil Facultative NA -8.8158 13.211231 Nitrobacter_winogradskyi_Nb_255 323098 Non-Human, Soil Facultative NA NA NA Nitrococcus_mobilis_Nb_231 314278 Non-Human, Marine (Other) Aerobe NA -0.3 -91.65 Nitrosococcus_halophilus_Nc4 472759 Non-Human, Marine (Other) Aerobe NA NA NA Nitrosococcus_oceani_AFC27 473788 Non-Human, Marine (Other) Aerobe NA 43 -155 Nitrosococcus_oceani_ATCC_19707 323261 Non-Human, Marine (Other) Aerobe NA NA NA Nitrosomonas_europaea_ATCC_19718 228410 Non-Human, Soil Aerobe NA NA NA Nitrosomonas_eutropha_C71 335283 Non-Human Aerobe NA 41.8647 -87.6477 Nitrosomonas_sp_AL212 153948 Non-Human, Soil Aerobe NA NA NA Nitrosospira_multiformis_ATCC_25196 323848 Non-Human, Soil Aerobe NA 5.8992 -55.168 Nocardia_farcinica_IFM_10152 247156 Human, Airways (Other), Soil Aerobe Pathogen NA NA Nocardioides_sp_JS614 196162 Non-Human, Soil Aerobe Non-Pathogen 33.831609 -118.263731 Nocardiopsis_dassonvillei_subsp_dassonvillei_DSM_43111 446468 Human Aerobe Pathogen 48.85 2.35 Nodularia_spumigena_CCY9414 313624 Non-Human, Marine (Other) Aerobe NA 55.525 16.61917 Nostoc_punctiforme_PCC_73102 63737 Non-Human, Soil Aerobe NA NA NA Nostoc_sp_PCC_7120 103690 Non-Human, Soil Aerobe NA NA NA Novosphingobium_aromaticivorans_DSM_12444 279238 Human, Soil Obligate aerobe NA 33.2842 -81.7263 Oceanibulbus_indolifex_HEL_45 391624 Non-Human, Marine (Other) Aerobe NA 54.13333 7.86667 Oceanicaulis_alexandrii_HTCC2633 314254 Non-Human, Marine (Other) Aerobe NA 31.666667 -64.166667 Oceanicola_batsensis_HTCC2597 252305 Non-Human, Marine (Other) Aerobe NA 31.666667 -64.166667 Oceanicola_granulosus_HTCC2516 314256 Non-Human, Marine (Other) Aerobe NA 31.666667 -64.166667 Oceanobacillus_iheyensis_HTE831 221109 Non-Human, Soil Aerobe NA NA NA Ochrobactrum_anthropi_ATCC_49188 439375 Human, Soil Aerobe Pathogen NA NA Ochrobactrum_intermedium_LMG_3301 641118 Human, Soil Aerobe Pathogen NA NA Octadecabacter_antarcticus_238 391616 Non-Human, Marine (Other) NA NA 73.016667 -148.516667 Octadecabacter_antarcticus_307 391626 Non-Human NA NA -77.534 166.354 Oenococcus_oeni_ATCC_BAA_1163 379360 Non-Human Facultative NA NA NA Oenococcus_oeni_AWRIB429 655225 Non-Human Facultative NA NA NA Oenococcus_oeni_PSU_1 203123 Non-Human Facultative Non-Pathogen NA NA Oligotropha_carboxidovorans_OM5 504832 Non-Human NA NA NA NA Onion_yellows_phytoplasma_OY_M 262768 Non-Human Aerobe Pathogen NA NA Opitutaceae_bacterium_TAV2 278957 Non-Human Facultative NA NA NA Opitutus_terrae_PB90_1 452637 Non-Human, Soil Anaerobe NA NA NA Oribacterium_sinus_F0268 585501 Human, Oral (Other) NA NA NA NA Oribacterium_sp_oral_taxon_078_str_F0262 608534 Human, Oral (Other) NA NA NA NA Orientia_tsutsugamushi_Boryong 357244 Human Aerobe Pathogen 37.538777 127.665269 Orientia_tsutsugamushi_Ikeda 334380 Human Aerobe Pathogen 37.953511 139.031525 Oxalobacter_formigenes_HOxBLS 556268 Human, Gut Anaerobe NA NA NA Oxalobacter_formigenes_OXCC13 556269 Human, Gut Anaerobe NA NA NA Paenibacillus_sp_JDR_2 324057 Non-Human Aerobe NA NA NA Paenibacillus_sp_oral_taxon_786_str_D14 621372 Human, Oral (Other) Aerobe NA NA NA Pantoea_ananatis_LMG_20103 706191 Non-Human Facultative Pathogen -27 30.8 Parabacteroides_distasonis_ATCC_8503 435591 Human, Gut Anaerobe Pathogen NA NA Parabacteroides_johnsonii_DSM_18315 537006 Human, Gut Anaerobe Non-Pathogen NA NA Parabacteroides_merdae_ATCC_43184 411477 Human, Gut Anaerobe Non-Pathogen NA NA Parabacteroides_sp_D13 563193 Non-Human NA NA NA NA Parachlamydia_acanthamoebae_str_Hall 159254 Non-Human NA NA NA NA Paracoccus_denitrificans_PD1222 318586 Non-Human, Soil Aerobe NA NA NA Parascardovia_denticolens_F0305 641144 Human, Oral (Other) Anaerobe NA NA NA Parvibaculum_lavamentivorans_DS_1 402881 Non-Human Aerobe NA 49.4855 8.4408 Parvimonas_micra_ATCC_33270 411465 Human, Gut Anaerobe Pathogen NA NA Parvularcula_bermudensis_HTCC2503 314260 Non-Human, Marine (Other) Aerobe NA 31.666667 -64.166667 Pasteurella_dagmatis_ATCC_43325 667128 Human, Airways (Other) NA NA NA NA Pasteurella_multocida_multocida_Pm70 272843 Non-Human Facultative Pathogen NA NA Pectobacterium_atrosepticum_SCRI1043 218491 Non-Human Facultative Pathogen NA NA Pectobacterium_carotovorum_carotovorum_WPP14 558270 Non-Human Facultative Pathogen NA NA Pectobacterium_carotovorum_subsp_carotovorum_PC1 561230 Non-Human Facultative Pathogen NA NA Pectobacterium_wasabiae_WPP163 561231 Non-Human Facultative Pathogen NA NA Pediococcus_acidilactici_7_4 563194 Human, Gut Aerobe NA NA NA Pediococcus_pentosaceus_ATCC_25745 278197 Non-Human Facultative Non-Pathogen NA NA Pedobacter_heparinus_DSM_2366 485917 Non-Human, Soil Aerobe NA NA NA Pedobacter_sp_BAL39 391596 Non-Human, Marine (Other) NA NA 63.51611 19.81583 Pelobacter_carbinolicus_DSM_2380 338963 Non-Human, Marine (Other) Anaerobe NA 45.4556 12.3374 Pelobacter_propionicus_DSM_2379 338966 Non-Human, Marine (Other) Anaerobe Non-Pathogen NA NA Pelodictyon_phaeoclathratiforme_BU_1 324925 Non-Human, Marine (Other) Anaerobe NA NA NA Pelotomaculum_thermopropionicum_SI 370438 Non-Human Anaerobe Non-Pathogen NA NA Peptoniphilus_lacrimalis_315_B 596330 Human, Urogenital (Vaginal) Anaerobe NA NA NA Peptostreptococcus_anaerobius_653_L 596329 Human, Skin Anaerobe NA NA NA Persephonella_marina_EX_H1 123214 Non-Human, Marine (Other) Microaerophilic NA 9.83416 104.284722 Petrotoga_mobilis_SJ95 403833 Non-Human, Marine (Other) Anaerobe NA NA NA Phaeobacter_gallaeciensis_2_10 383629 Non-Human, Marine (Other) Aerobe NA NA NA Phaeobacter_gallaeciensis_BS107 391619 Non-Human, Marine (Other) Aerobe NA 43.371491 -8.39597 Phenylobacterium_zucineum_HLK1 450851 Human Aerobe NA NA NA Photobacterium_angustum_S14 314292 Non-Human, Marine (Other) Anaerobe NA -34.01667 151.31667 Photobacterium_damselae_subsp_damselae_CIP_102761 675817 Non-Human, Marine (Other) NA NA NA NA Photobacterium_profundum_3TCK 314280 Non-Human, Marine (Other) Facultative NA 32 -117 Photobacterium_profundum_SS9 298386 Non-Human, Marine (Other) Facultative NA NA NA Photobacterium_sp_SKA34 121723 Non-Human, Marine (Other) NA NA 58.94083 11.07944 Photorhabdus_asymbiotica 291112 Human Facultative Pathogen NA NA Photorhabdus_luminescens_laumondii_TTO1 243265 Non-Human Facultative Pathogen NA NA Pirellula_staleyi_DSM_6068 530564 Non-Human Aerobe NA 42.759 -84.399 Planctomyces_limnophilus_DSM_3776 521674 Non-Human, Marine (Other) Aerobe NA 54.182 10.445 Planctomyces_maris_DSM_8797 344747 Non-Human, Marine (Other) Aerobe NA 48.4 -122.6 Plesiocystis_pacifica_SIR_1 391625 Non-Human, Marine (Other) Aerobe NA 20 116 Polaribacter_irgensii_23_P 313594 Non-Human, Marine (Other) Aerobe NA -65.25 -64.26667 Polaribacter_sp_MED152 313598 Non-Human, Marine (Other) Aerobe NA 41.66667 2.8 Polaromonas_naphthalenivorans_CJ2 365044 Non-Human Aerobe Non-Pathogen 43.3007 -73.6349 Polaromonas_sp_JS666 296591 Non-Human Aerobe NA NA NA Polynucleobacter_necessarius_STIR1 452638 Non-Human Aerobe NA NA NA Polynucleobacter_sp_QLW_P1DMWA_1 312153 Non-Human Aerobe NA NA NA Porphyromonas_gingivalis_ATCC_33277 431947 Human, Gut, Oral (Gingivae) Anaerobe Pathogen NA NA Porphyromonas_gingivalis_W83 242619 Human, Gut Anaerobe Pathogen 50.732705 7.096311 Porphyromonas_uenonis_60_3 596327 Human, Urogenital (Vaginal) NA NA NA NA Prevotella_bergensis_DSM_17361 585502 Human, Skin Anaerobe NA NA NA Prevotella_bivia_JCVIHMP010 553171 Human, Urogenital (Vaginal) Anaerobe NA NA NA Prevotella_buccae_D17 575611 Human, Oral (Gingivae) Anaerobe NA NA NA Prevotella_buccalis_ATCC_35310 679190 Human, Oral (Other), Urogenital (Other) Anaerobe NA NA NA Prevotella_copri_CB7_DSM_18205 537011 Human, Gut Anaerobe NA NA NA Prevotella_melaninogenica_ATCC_25845 553174 Human, Oral (Other) Anaerobe NA NA NA Prevotella_melaninogenica_D18 575612 Human, Oral (Gingivae) Anaerobe NA NA NA Prevotella_oris_F0302 649760 Human, Oral (Other) Anaerobe NA NA NA Prevotella_ruminicola_23 264731 Human Anaerobe Pathogen NA NA Prevotella_sp_oral_taxon_299_str_F0039 575614 Human, Oral (Other) Anaerobe NA NA NA Prevotella_sp_oral_taxon_317_str_F0108 575615 Human, Oral (Other) Anaerobe NA NA NA Prevotella_sp_oral_taxon_472_str_F0295 619693 Human, Oral (Other) Anaerobe NA NA NA Prevotella_tannerae_ATCC_51259 626522 Human, Oral (Gingivae) Anaerobe NA NA NA Prevotella_timonensis_CRIS_5C_B1 679189 Human, Urogenital (Vaginal) Anaerobe NA NA NA Prevotella_veroralis_F0319 649761 Human, Oral (Gingivae) Anaerobe NA NA NA Prochlorococcus_marinus_AS9601 146891 Non-Human, Marine (Other) NA Non-Pathogen -19 67 Prochlorococcus_marinus_MIT_9211 93059 Non-Human, Marine (Other) NA Non-Pathogen NA -140 Prochlorococcus_marinus_MIT_9215 93060 Non-Human, Marine (Other) NA NA NA NA Prochlorococcus_marinus_MIT_9301 167546 Non-Human, Marine (Other) NA NA 34.751389 -66.183611 Prochlorococcus_marinus_MIT_9303 59922 Non-Human, Marine (Other) NA Non-Pathogen 34.75139 -66.18361 Prochlorococcus_marinus_MIT_9312 74546 Non-Human, Marine (Other) NA NA NA NA Prochlorococcus_marinus_MIT_9313 74547 Non-Human, Marine (Other) NA NA NA NA Prochlorococcus_marinus_MIT_9515 167542 Non-Human, Marine (Other) NA Non-Pathogen -5.11667 -107.01667 Prochlorococcus_marinus_NATL1A 167555 Non-Human, Marine (Other) NA Non-Pathogen 37.06667 -40 Prochlorococcus_marinus_NATL2A 59920 Non-Human, Marine (Other) NA NA NA NA Prochlorococcus_marinus_marinus_CCMP1375 167539 Non-Human, Marine (Other) NA NA NA NA Prochlorococcus_marinus_pastoris_CCMP1986 59919 Non-Human, Marine (Other) NA NA NA NA Prochlorococcus_marinus_str_MIT_9202 93058 Non-Human, Marine (Other) NA NA -12 -145.41667 Propionibacterium_acnes_J139 679194 Human, Skin Anaerobe NA NA NA Propionibacterium_acnes_J165 679195 Human, Skin Anaerobe NA NA NA Propionibacterium_acnes_KPA171202 267747 Human, Skin Anaerobe Pathogen NA NA Propionibacterium_acnes_SK137 553199 Human, Skin Anaerobe NA NA NA Propionibacterium_acnes_SK187 686659 Human, Skin Anaerobe NA NA NA Prosthecochloris_aestuarii_SK413_DSM_271 290512 Non-Human NA NA NA NA Proteus_mirabilis_ATCC_29906 525369 Human, Urogenital (Other) Facultative NA NA NA Proteus_mirabilis_HI4320 529507 Human, Urogenital (Other) Facultative Pathogen NA NA Proteus_penneri 471881 Human, Gut Facultative Pathogen NA NA Providencia_alcalifaciens_DSM_30120 520999 Human, Gut Facultative NA NA NA Providencia_rettgeri_DSM_1131 521000 Human, Gut Facultative NA NA NA Providencia_rustigianii_DSM_4541 500637 Human, Gut Anaerobe NA NA NA Providencia_stuartii_ATCC_25827 471874 Human, Gut Anaerobe Pathogen NA NA Pseudoalteromonas_atlantica_T6c 342610 Non-Human Aerobe NA 32.6852 -117.1445 Pseudoalteromonas_haloplanktis_TAC125 326442 Non-Human, Marine (Other) Aerobe NA -66.4 140.01 Pseudoalteromonas_sp_TW_7 156578 Non-Human, Marine (Other) Aerobe NA 32.85 -117.25 Pseudoalteromonas_tunicata_D2 87626 Non-Human, Marine (Other) Facultative NA 58.261661 11.4396 Pseudomonas_aeruginosa_LESB58 557722 Human, Airways (Other), Soil Aerobe Pathogen 53.4127 -2.9777 Pseudomonas_aeruginosa_PA7 381754 Human, Soil Aerobe Pathogen NA NA Pseudomonas_aeruginosa_PACS2 388272 Human, Soil Aerobe Pathogen NA NA Pseudomonas_aeruginosa_PAO1 208964 Human, Soil Aerobe Pathogen NA NA Pseudomonas_aeruginosa_PAb1 509633 Human Aerobe NA NA NA Pseudomonas_aeruginosa_UCBPP_PA14 208963 Human, Soil Aerobe Pathogen NA NA Pseudomonas_entomophila_L48 384676 Non-Human Aerobe Pathogen NA NA Pseudomonas_fluorescens_PfO_1 205922 Non-Human, Soil Aerobe Non-Pathogen 42.2424 -71.3697 Pseudomonas_fluorescens_Pf_5 220664 Non-Human, Soil Aerobe Non-Pathogen NA NA Pseudomonas_fluorescens_SBW25 216595 Non-Human NA NA NA NA Pseudomonas_mendocina_ymp 399739 Human, Soil Aerobe Pathogen NA NA Pseudomonas_putida_F1 351746 Non-Human, Soil Aerobe Non-Pathogen 40.106649 -88.195627 Pseudomonas_putida_GB_1 76869 Non-Human, Soil Aerobe Non-Pathogen NA NA Pseudomonas_putida_KT2440 160488 Non-Human, Soil Aerobe Non-Pathogen NA NA Pseudomonas_putida_W619 390235 Non-Human, Soil Aerobe Non-Pathogen NA NA Pseudomonas_sp_UK4 452680 Non-Human Aerobe NA NA NA Pseudomonas_stutzeri_A1501 379731 Non-Human, Soil Aerobe Non-Pathogen NA NA Pseudomonas_syringae_pv_aesculi_str_2250 666475 Non-Human Aerobe Pathogen NA NA Pseudomonas_syringae_pv_aesculi_str_NCPPB3681 665027 Non-Human Aerobe Pathogen NA NA Pseudomonas_syringae_pv_oryzae_str_1_6 563797 Non-Human, Soil Aerobe Pathogen NA NA Pseudomonas_syringae_pv_phaseolicola_1448A 264730 Non-Human Aerobe Pathogen NA NA Pseudomonas_syringae_pv_syringae_B728a 205918 Non-Human Aerobe Pathogen NA NA Pseudomonas_syringae_pv_tabaci_ATCC_11528 573066 Non-Human Aerobe Pathogen NA NA Pseudomonas_syringae_pv_tomato_DC3000 223283 Non-Human, Soil Aerobe Pathogen 49.5 -2.5 Pseudomonas_syringae_pv_tomato_T1 546231 Non-Human, Soil Aerobe NA NA NA Pseudovibrio_sp_JE062 439495 Non-Human, Marine (Other) Facultative NA 24.95306 -80.46583 Psychrobacter_arcticus_273_4 259536 Non-Human, Soil Aerobe Pathogen 65.821602 153.327561 Psychrobacter_cryohalolentis_K5 335284 Non-Human Aerobe Pathogen NA NA Psychrobacter_sp_PRwf_1 349106 Non-Human, Marine (Other), Soil Aerobe Pathogen NA NA Psychroflexus_torquis_ATCC_700755 313595 Non-Human, Marine (Other) Aerobe NA -69 75 Psychromonas_ingrahamii_37 357804 Non-Human, Marine (Other) Anaerobe Non-Pathogen 71.294 -156.25 Pyramidobacter_piscolens_W5455 352165 Human, Oral (Other) Obligate anaerobe NA NA NA Ralstonia_eutropha_H16 381666 Non-Human, Soil Aerobe NA NA NA Ralstonia_eutropha_JMP134 264198 Non-Human, Soil Aerobe NA NA NA Ralstonia_pickettii_12D 428406 Human, Soil Aerobe Pathogen NA NA Ralstonia_pickettii_12J 402626 Human, Soil Aerobe Pathogen NA NA Ralstonia_solanacearum_GMI1000 267608 Non-Human, Soil Aerobe Pathogen NA NA Ralstonia_solanacearum_UW551 342110 Non-Human, Soil Aerobe Pathogen NA NA Raphidiopsis_brookii_D9 533247 Non-Human NA NA NA NA Reinekea_sp_MED297 314283 Non-Human, Marine (Other) NA NA NA NA Renibacterium_salmoninarum_ATCC_33209 288705 Non-Human Facultative Pathogen NA NA Rhizobium_etli_8C_3 538025 Non-Human Aerobe NA NA NA Rhizobium_etli_Brasil_5 526949 Non-Human Aerobe NA NA NA Rhizobium_etli_CFN_42 347834 Non-Human Aerobe NA 21.019266 -101.261455 Rhizobium_etli_CIAT_652 491916 Non-Human Aerobe NA NA NA Rhizobium_etli_IE4771 526946 Non-Human Aerobe NA NA NA Rhizobium_leguminosarum_bv_trifolii_WSM1325 395491 Non-Human, Soil Aerobe Non-Pathogen 37.147034 24.518901 Rhizobium_leguminosarum_bv_trifolii_WSM2304 395492 Non-Human, Soil Aerobe Non-Pathogen -32.533333 -57 Rhizobium_leguminosarum_bv_viciae_3841 216596 Non-Human Aerobe Non-Pathogen NA NA Rhizobium_sp_NGR234_ANU265 394 Non-Human Aerobe NA NA NA Rhodobacter_capsulatus_SB1003 272942 Non-Human Facultative NA NA NA Rhodobacter_sp_SW2 371731 Non-Human, Soil Anaerobe NA NA NA Rhodobacter_sphaeroides_2_4_1 272943 Non-Human Facultative Non-Pathogen NA NA Rhodobacter_sphaeroides_ATCC_17025 349102 Non-Human Facultative Non-Pathogen NA NA Rhodobacter_sphaeroides_ATCC_17029 349101 Non-Human Facultative Non-Pathogen NA NA Rhodobacter_sphaeroides_KD131 557760 Non-Human Facultative NA 37.253833 126.560783 Rhodobacteraceae_bacterium_KLH11 467661 Non-Human, Marine (Other) NA NA 25.119109 -80.417838 Rhodobacterales_bacterium_HTCC2083 314270 Non-Human, Marine (Other) NA NA 44.652137 -124.070921 Rhodobacterales_bacterium_HTCC2150 388401 Non-Human, Marine (Other) NA NA 44.650749 -124.064441 Rhodobacterales_bacterium_HTCC2654 314271 Non-Human, Marine (Other) NA NA NA NA Rhodobacterales_bacterium_Y4I 439496 Non-Human, Marine (Other) NA NA 30.742931 -81.554188 Rhodococcus_equi_ATCC_33707 525370 Human, Skin Aerobe NA NA NA Rhodococcus_erythropolis_PR4 234621 Non-Human, Marine (Other) Aerobe NA NA NA Rhodococcus_erythropolis_SK121 596309 Human, Skin Aerobe NA NA NA Rhodococcus_opacus_B4 632772 Non-Human Aerobe NA NA NA Rhodococcus_sp_RHA1 101510 Non-Human, Soil Aerobe NA NA NA Rhodoferax_ferrireducens_T118 338969 Non-Human Anaerobe NA 37.8481 -75.5094 Rhodomicrobium_vannielii_ATCC_17100 648757 Non-Human NA NA NA NA Rhodopirellula_baltica_SH_1 243090 Non-Human, Marine (Heterotroph) Aerobe NA 54.451262 10.261204 Rhodopseudomonas_palustris_BisA53 316055 Non-Human, Soil Facultative Non-Pathogen NA NA Rhodopseudomonas_palustris_BisB18 316056 Non-Human, Soil Facultative NA NA NA Rhodopseudomonas_palustris_BisB5 316057 Non-Human, Soil Facultative NA NA NA Rhodopseudomonas_palustris_CGA009 258594 Non-Human, Soil Facultative NA NA NA Rhodopseudomonas_palustris_DX_1 652103 Non-Human, Soil Facultative NA NA NA Rhodopseudomonas_palustris_HaA2 316058 Non-Human, Soil Facultative NA NA NA Rhodopseudomonas_palustris_TIE_1 395960 Non-Human, Soil Facultative NA 41.526357 -70.668322 Rhodospirillum_centenum_SW 414684 Non-Human Facultative NA NA NA Rhodospirillum_rubrum_ATCC_11170 269796 Non-Human Facultative Non-Pathogen NA NA Rhodothermus_marinus_DSM_4252 518766 Non-Human, Hydrothermal, Marine (Heterotroph) Aerobe NA 63.88 -22.5 Rickettsia_africae_ESF_5 347255 Human Aerobe Pathogen NA NA Rickettsia_akari_Hartford 293614 Human Aerobe Pathogen NA NA Rickettsia_bellii_OSU_85_389 391896 Non-Human Aerobe Pathogen NA NA Rickettsia_bellii_RML369_C 336407 Non-Human Aerobe Pathogen 36.0759 -94.1577 Rickettsia_canadensis_McKiel 293613 Non-Human Aerobe Pathogen NA NA Rickettsia_conorii_Malish_7 272944 Human Aerobe Pathogen NA NA Rickettsia_endosymbiont_of_Ixodes_scapularis 444612 Non-Human NA Pathogen NA NA Rickettsia_felis_URRWXCal2 315456 Non-Human Aerobe Pathogen NA NA Rickettsia_massiliae_MTU5 416276 Non-Human Aerobe Non-Pathogen 43.881678 2.796343 Rickettsia_peacockii_str_Rustic 562019 Human Aerobe Pathogen NA NA Rickettsia_prowazekii_Madrid_E 272947 Human Aerobe Pathogen 40.416741 -3.70325 Rickettsia_prowazekii_Rp22 449216 Human Aerobe Pathogen NA NA Rickettsia_rickettsii_Iowa 452659 Human Aerobe Pathogen NA NA Rickettsia_rickettsii_Sheila_Smith 392021 Human Aerobe Pathogen NA NA Rickettsia_sibirica_246 272951 Human Aerobe Pathogen NA NA Rickettsia_typhi_Wilmington 257363 Human Aerobe Pathogen NA NA Rickettsiella_grylli 59196 Non-Human, Soil Facultative Pathogen NA NA Robiginitalea_biformata_HTCC2501 313596 Non-Human, Marine (Other) Aerobe NA NA NA Roseiflexus_castenholzii_DSM_13941 383372 Non-Human, Hydrothermal, Marine (Other) Facultative NA NA NA Roseiflexus_sp_RS_1 357808 Non-Human, Hydrothermal, Marine (Other) Facultative NA NA NA Roseobacter_denitrificans_OCh_114 375451 Non-Human Aerobe Non-Pathogen 35.447507 139.642345 Roseobacter_litoralis_Och_149 391595 Non-Human, Marine (Other) Aerobe NA NA NA Roseobacter_sp_AzwK_3b 351016 Non-Human, Marine (Other) Aerobe NA 36.84262 -121.74701 Roseobacter_sp_CCS2 391593 Non-Human, Marine (Other) Aerobe NA 38.308333 -123.3 Roseobacter_sp_GAI101 391589 Non-Human, Marine (Other) Aerobe NA NA NA Roseobacter_sp_MED193 314262 Non-Human, Marine (Other) Aerobe NA 41.66667 2.8 Roseobacter_sp_SK209_2_6 388739 Non-Human, Marine (Other) Aerobe NA NA NA Roseovarius_nubinhibens_ISM 89187 Non-Human, Marine (Heterotroph) Aerobe NA 22.066667 -74.066667 Roseovarius_sp_217 314264 Non-Human, Marine (Heterotroph) Aerobe NA 50.25 -4.21667 Roseovarius_sp_HTCC2601 314265 Non-Human, Marine (Heterotroph) Aerobe NA NA NA Roseovarius_sp_TM1035 391613 Non-Human, Marine (Heterotroph) Aerobe NA NA NA Rothia_dentocariosa_ATCC_17931 762948 Human, Oral (Other) NA NA NA NA Rothia_mucilaginosa_ATCC_25296 553201 Human, Airways (Other) NA NA NA NA Rothia_mucilaginosa_DY_18 680646 Human, Airways (Other) NA NA NA NA Rubrobacter_xylanophilus_DSM_9941 266117 Non-Human, Soil Aerobe Pathogen 51.3534 -1.6156 Ruegeria_pomeroyi_DSS_3 246200 Non-Human Aerobe NA NA NA Ruegeria_sp_R11 439497 Non-Human, Marine (Other) NA Pathogen -33.99389 151.26667 Ruegeria_sp_TM1040 292414 Non-Human, Marine (Other) Aerobe Non-Pathogen NA NA Ruminococcus_albus_8 246199 Non-Human, Farm Anaerobe NA NA NA Ruminococcus_flavefaciens_FD_1 641112 Non-Human, Farm Anaerobe NA NA NA Ruminococcus_gnavus_ATCC_29149 411470 Human, Gut Anaerobe Non-Pathogen NA NA Ruminococcus_lactaris_ATCC_29176 471875 Human, Gut Anaerobe NA NA NA Ruminococcus_obeum_ATCC_29174 411459 Human, Gut Anaerobe Non-Pathogen NA NA Ruminococcus_sp_5_1_39BFAA 457412 Human, Gut Anaerobe NA NA NA Ruminococcus_torques_ATCC_27756 411460 Human, Gut Anaerobe Non-Pathogen NA NA Saccharomonospora_viridis_DSM_43017 471857 Human Aerobe Pathogen NA NA Saccharophagus_degradans_2_40 203122 Non-Human Aerobe NA 37.584154 -76.178374 Sagittula_stellata_E_37 388399 Non-Human, Marine (Other) Aerobe NA NA NA Salinibacter_ruber_DSM_13855 309807 Non-Human Aerobe NA 39.776 3.0203 Salinispora_arenicola_CNS_205 391037 Non-Human, Marine (Other) Aerobe NA 26.6 -77.8833 Salinispora_tropica_CNB_440 369723 Non-Human, Marine (Other) Aerobe Non-Pathogen NA NA Salmonella_enterica_Agona_SL483 454166 Human, Soil, Food Facultative Pathogen NA NA Salmonella_enterica_Paratyphi_C_RKS4594 476213 Human Facultative Pathogen NA NA Salmonella_enterica_arizonae_sv_62_z4_z23 41514 Human Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Choleraesuis_SC_B67 321314 Human, Soil, Food Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Enteritidis_P125109 550537 Human Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Gallinarum_287_91 550538 Human Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Hadar_RI_05P066 465516 Human, Soil, Food Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Javiana_GA_MM04042433 454167 Human, Soil, Food Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Paratyphi_A_ATCC_9150 295319 Human, Soil, Food Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Typhi_404ty 497977 Human Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Typhi_AG3 496065 Human Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Typhi_CT18 220341 Non-Human, Soil, Food Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Typhi_E00_7866 497976 Human Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Typhi_E01_6750 497975 Human Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Typhi_E02_1180 497974 Human Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Typhi_E98_0664 497973 Human Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Typhi_E98_2068 496068 Human Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Typhi_E98_3139 496064 Human Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Typhi_J185 496067 Human Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Typhi_M223 496066 Human Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Typhi_Ty2 209261 Human, Soil, Food Facultative Pathogen NA NA Salmonella_enterica_enterica_sv_Virchow_SL491 465517 Human, Soil, Food Facultative Pathogen NA NA Salmonella_enterica_subsp_enterica_serovar_Tennessee_str_CDC07_0191 573395 Human, Urogenital (Other) Facultative Pathogen NA NA Salmonella_enterica_subsp_enterica_serovar_Typhimurium 90371 Human, Soil, Food Facultative Pathogen -15.793 34.993 Salmonella_enterica_subsp_enterica_serovar_Typhimurium_str_14028S 588858 Human, Soil, Food Facultative Pathogen NA NA Salmonella_enterica_sv_Dublin_CT_02021853 439851 Human, Soil, Food Facultative Pathogen NA NA Salmonella_enterica_sv_Heidelberg_SL476_CVM30485 454169 Human, Soil, Food Facultative Pathogen NA NA Salmonella_enterica_sv_Newport_SL254 423368 Human, Soil, Food Facultative Pathogen NA NA Salmonella_enterica_sv_Paratyphi_A_AKU_12601 554290 Human Facultative Pathogen 24.893379 67.028061 Salmonella_enterica_sv_Schwarzengrund_CVM19633 439843 Human, Soil, Food Facultative Pathogen NA NA Salmonella_typhimurium_LT2 99287 Human, Soil, Food Facultative Pathogen NA NA Sanguibacter_keddieii_DSM_10542 446469 Non-Human, Farm Facultative NA NA NA Scardovia_inopinata_F0304 641146 Human, Oral (Other) NA NA NA NA Sebaldella_termitidis_ATCC_33386 526218 Non-Human Anaerobe NA NA NA Segniliparus_rotundus_DSM_44985 640132 Human, Airways (Other) Aerobe NA NA NA Selenomonas_flueggei_ATCC_43531 638302 Human, Oral (Other) Anaerobe NA NA NA Selenomonas_noxia_ATCC_43541 585503 Human, Oral (Other) Anaerobe NA NA NA Selenomonas_sputigena_ATCC_35185 546271 Human, Oral (Gingivae) Anaerobe NA NA NA Serratia_odorifera_4Rx13 682634 Human, Airways (Other), Skin Facultative NA NA NA Serratia_odorifera_DSM_4582 667129 Human, Airways (Other), Skin Facultative NA 44.837368 -0.576144 Shewanella_amazonensis_SB2B 326297 Non-Human Facultative NA NA NA Shewanella_baltica_OS155 325240 Non-Human, Marine (Heterotroph) Facultative NA NA NA Shewanella_baltica_OS185 402882 Non-Human, Marine (Heterotroph) Facultative Non-Pathogen NA NA Shewanella_baltica_OS195 399599 Non-Human, Marine (Heterotroph) Facultative NA NA NA Shewanella_baltica_OS223 407976 Non-Human, Marine (Heterotroph) Facultative NA NA NA Shewanella_benthica_KT99 314608 Non-Human, Marine (Heterotroph) Facultative NA -20 -173 Shewanella_denitrificans_OS217 318161 Non-Human, Marine (Heterotroph) Facultative NA 57.3798 20.0115 Shewanella_frigidimarina_NCIMB_400 318167 Non-Human, Marine (Heterotroph) Facultative NA 57.158679 -2.071953 Shewanella_halifaxensis_HAW_EB4 458817 Non-Human, Marine (Heterotroph) Facultative NA 44.088769 -62.738342 Shewanella_loihica_PV_4 323850 Non-Human, Marine (Heterotroph) Anaerobe NA 21.39752 -157.805895 Shewanella_oneidensis_MR_1 211586 Non-Human Facultative Pathogen 43.204557 -75.923098 Shewanella_pealeana_ATCC_700345 398579 Non-Human Facultative NA 41.526411 -70.680585 Shewanella_piezotolerans_WP3 225849 Non-Human, Marine (Heterotroph) Facultative NA 8.003056 -142.502222 Shewanella_putrefaciens_200 399804 Human, Soil Anaerobe Pathogen NA NA Shewanella_putrefaciens_CN_32 319224 Non-Human, Soil Anaerobe Pathogen 35.080371 -106.627085 Shewanella_sediminis_HAW_EB3 425104 Non-Human, Marine (Heterotroph) Facultative NA 44.646244 -63.573566 Shewanella_sp_ANA_3 94122 Non-Human, Soil Anaerobe NA 41.525871 -70.670327 Shewanella_sp_MR_4 60480 Non-Human, Marine (Heterotroph) Anaerobe NA NA NA Shewanella_sp_MR_7 60481 Non-Human, Marine (Heterotroph) Anaerobe NA NA NA Shewanella_sp_W3_18_1 351745 Non-Human, Marine (Heterotroph) Facultative Pathogen NA NA Shewanella_violacea_DSS12 637905 Non-Human Facultative NA NA NA Shewanella_woodyi_ATCC_51908 392500 Non-Human, Marine (Heterotroph) Facultative NA NA NA Shigella_boydii_CDC_3083_94 344609 Human Facultative Pathogen NA NA Shigella_boydii_Sb227 300268 Human Facultative Pathogen NA NA Shigella_dysenteriae_1012 358708 Human Facultative Pathogen NA NA Shigella_dysenteriae_Sd197 300267 Human Facultative Pathogen NA NA Shigella_flexneri_2002017 591020 Human Facultative Pathogen NA NA Shigella_flexneri_2a_2457T 198215 Human Facultative Pathogen NA NA Shigella_flexneri_2a_301 198214 Human Facultative Pathogen 39.908173 116.397947 Shigella_flexneri_5_8401 373384 Human Facultative Pathogen NA NA Shigella_sonnei_Ss046 300269 Human Facultative Pathogen NA NA Shigella_sp_D9 556266 Human, Gut Facultative NA NA NA Shuttleworthia_satelles_DSM_14600 626523 Human, Oral (Other) NA NA NA NA Sideroxydans_lithotrophicus_ES_1 580332 Non-Human Aerobe NA NA NA Silicibacter_lacuscaerulensis_ITI_1157 644107 Non-Human, Marine (Other) Aerobe NA 63.879 -22.434 Silicibacter_sp_TrichCH4B 644076 Non-Human, Marine (Other) Aerobe NA NA NA Simonsiella_muelleri_ATCC_29453 641147 Human, Oral (Other) NA NA NA NA Sinorhizobium_medicae_WSM419 366394 Non-Human, Soil Aerobe Non-Pathogen 40.888925 9.101915 Sinorhizobium_meliloti_1021 266834 Non-Human, Soil Aerobe Pathogen NA NA Slackia_exigua_ATCC_700122 649764 Human, Oral (Other) Anaerobe NA NA NA Slackia_heliotrinireducens_DSM_20476 471855 Non-Human, Farm Obligate anaerobe NA NA NA Sodalis_glossinidius_morsitans 343509 Non-Human Microaerophilic Non-Pathogen NA NA Solibacter_usitatus_Ellin6076 234267 Non-Human, Soil Aerobe NA -36.5588 145.415039 Sorangium_cellulosum_So_ce_56 448385 Non-Human, Soil Aerobe NA NA NA Sphaerobacter_thermophilus_DSM_20745 479434 Non-Human Obligate aerobe NA 48.139 11.58 Sphingobacterium_spiritivorum_ATCC_33300 525372 Human, Urogenital (Vaginal) NA NA NA NA Sphingobacterium_spiritivorum_ATCC_33861 525373 Human, Urogenital (Vaginal) NA NA NA NA Sphingobium_japonicum_UT26S 452662 Non-Human NA NA NA NA Sphingomonas_sp_SKA58 314266 Non-Human, Marine (Heterotroph) Aerobe NA 58.94083 11.07944 Sphingomonas_wittichii_RW1 392499 Non-Human Aerobe NA 53.5528 9.9806 Sphingopyxis_alaskensis_RB2256 317655 Non-Human, Marine (Heterotroph) Aerobe NA 58.42198 -149.574839 Spirosoma_linguale_DSM_74 504472 Non-Human, Soil Aerobe NA NA NA Stackebrandtia_nassauensis_DSM_44728 446470 Non-Human, Soil Aerobe NA 25.066127 -77.339025 Staphylococcus_aureus_04_02981 703339 Human Facultative Pathogen NA NA Staphylococcus_aureus_930918_3 452948 Non-Human Facultative Non-Pathogen NA NA Staphylococcus_aureus_A10102 553601 Human Facultative Pathogen NA NA Staphylococcus_aureus_A5937 553565 Human Facultative Pathogen NA NA Staphylococcus_aureus_A5948 553567 Human Facultative Pathogen NA NA Staphylococcus_aureus_A6224 553568 Human Facultative Pathogen NA NA Staphylococcus_aureus_A6300 553571 Human Facultative Pathogen NA NA Staphylococcus_aureus_A8115 553573 Human Facultative Pathogen NA NA Staphylococcus_aureus_A8117 553574 Human Facultative Pathogen NA NA Staphylococcus_aureus_A8796 553577 Human Facultative Pathogen NA NA Staphylococcus_aureus_A8819 553580 Human Facultative Pathogen NA NA Staphylococcus_aureus_A9299 553581 Human Facultative Pathogen NA NA Staphylococcus_aureus_A9635 553583 Human Facultative Pathogen NA NA Staphylococcus_aureus_A9719 553588 Human Facultative Pathogen NA NA Staphylococcus_aureus_A9754 553590 Human Facultative Pathogen NA NA Staphylococcus_aureus_A9763 553592 Human Facultative Pathogen NA NA Staphylococcus_aureus_A9765 553594 Human Facultative Pathogen NA NA Staphylococcus_aureus_A9781 553596 Human Facultative Pathogen NA NA Staphylococcus_aureus_D30 455227 Human, Airways (Other) Facultative Pathogen NA NA Staphylococcus_aureus_MN8 548470 Human, Urogenital (Vaginal) Facultative NA NA NA Staphylococcus_aureus_RF122 273036 Non-Human, Farm Facultative Pathogen NA NA Staphylococcus_aureus_aureus_COL 93062 Human Facultative Pathogen NA NA Staphylococcus_aureus_aureus_JH1 359787 Human Facultative Pathogen NA NA Staphylococcus_aureus_aureus_JH9 359786 Human Facultative Pathogen NA NA Staphylococcus_aureus_aureus_JKD6008 546342 Human Facultative Pathogen NA NA Staphylococcus_aureus_aureus_JKD6009 546343 Human Facultative Pathogen NA NA Staphylococcus_aureus_aureus_MRSA252 282458 Human Facultative Pathogen NA NA Staphylococcus_aureus_aureus_MRSA_USA300_TCH1516 451516 Human, Skin Facultative Pathogen NA NA Staphylococcus_aureus_aureus_MSSA476 282459 Human Facultative Pathogen NA NA Staphylococcus_aureus_aureus_MW2 196620 Human Facultative Pathogen NA NA Staphylococcus_aureus_aureus_Mu3 418127 Human, Airways (Other) Facultative Pathogen NA NA Staphylococcus_aureus_aureus_Mu50 158878 Human Facultative Pathogen NA NA Staphylococcus_aureus_aureus_N315 158879 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Staphylococcus_aureus_aureus_NCTC_8325 93061 Human Facultative Pathogen NA NA Staphylococcus_aureus_aureus_Newman 426430 Human Facultative Pathogen NA NA Staphylococcus_aureus_aureus_TCH60 548473 Human, Skin Facultative Pathogen NA NA Staphylococcus_aureus_aureus_USA300 367830 Human Facultative Pathogen NA NA Staphylococcus_aureus_aureus_USA300_TCH959 450394 Human, Skin Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_132 644279 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_55_2053 585143 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_58_424 585144 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_65_1322 585145 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_68_397 585146 Human, Airways (Other) Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_A017934_97 585147 Human, Airways (Other) Facultative NA NA NA Staphylococcus_aureus_subsp_aureus_ATCC_51811 762962 Human, Airways (Other) Facultative NA NA NA Staphylococcus_aureus_subsp_aureus_Btn1260 585148 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_C101 585149 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_C160 585150 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_C427 585151 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_D139 585152 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_E1410 585153 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_ED98 681288 Human, Airways (Other) Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_EMRSA16 585154 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_H19 585155 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_M1015 585156 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_M809 585157 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_M876 585158 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_M899 585159 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_MR1 680649 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_Mu50_omega 585891 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_ST398 523796 Non-Human, Farm Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_TCH130 548474 Human, Skin Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_TCH70 548475 Human, Skin Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_TW20 663951 Human, Airways (Other) Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_WBG10049 585160 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_WW2703_97 585161 Human Facultative Pathogen NA NA Staphylococcus_aureus_subsp_aureus_str_CF_Marseille 505321 Human, Airways (Other) Facultative Pathogen NA NA Staphylococcus_capitis_SK14 553212 Human, Skin Facultative NA NA NA Staphylococcus_carnosus_carnosus_TM300 396513 Non-Human Facultative Non-Pathogen 50.024682 11.762694 Staphylococcus_epidermidis_ATCC_12228 176280 Human Facultative Non-Pathogen NA NA Staphylococcus_epidermidis_BCM_HMP0060 525374 Human, Skin Facultative NA NA NA Staphylococcus_epidermidis_M23864_W1 525378 Human, Skin Facultative NA NA NA Staphylococcus_epidermidis_M23864_W2_grey 525375 Human, Skin Facultative NA NA NA Staphylococcus_epidermidis_RP62A 176279 Human Facultative Pathogen NA NA Staphylococcus_epidermidis_SK135 596317 Human, Skin Facultative Pathogen NA NA Staphylococcus_epidermidis_W23144 525376 Human, Skin Facultative NA NA NA Staphylococcus_haemolyticus_JCSC1435 279808 Human Facultative Pathogen 35.702222 139.7625 Staphylococcus_hominis_SK119 629742 Human, Skin Facultative NA NA NA Staphylococcus_lugdunensis_HKU09_01 698737 Human, Skin Facultative Pathogen NA NA Staphylococcus_saprophyticus_saprophyticus_ATCC_15305 342451 Human, Urogenital (Other) Aerobe Pathogen NA NA Staphylococcus_warneri_L37603 596319 Human, Skin Facultative NA NA NA Stenotrophomonas_maltophilia_K279a 522373 Human, Soil Aerobe Pathogen 51.458946 -2.598424 Stenotrophomonas_maltophilia_R551_3 391008 Human, Soil Aerobe Pathogen NA NA Stigmatella_aurantiaca_DW4_3_1 378806 Non-Human, Soil Aerobe NA NA NA Streptobacillus_moniliformis_DSM_12112 519441 Human Facultative Pathogen NA NA Streptococcus_agalactiae_18RS21 342613 Human Facultative Pathogen NA NA Streptococcus_agalactiae_2603V_R 208435 Human Facultative Pathogen NA NA Streptococcus_agalactiae_515 342614 Human Facultative Pathogen NA NA Streptococcus_agalactiae_A909 205921 Human Facultative Pathogen NA NA Streptococcus_agalactiae_CJB111 342617 Human Facultative Pathogen NA NA Streptococcus_agalactiae_COH1 342616 Human Facultative Pathogen NA NA Streptococcus_agalactiae_H36B 342615 Human Facultative Pathogen NA NA Streptococcus_agalactiae_NEM316 211110 Human Facultative Pathogen NA NA Streptococcus_dysgalactiae_subsp_equisimilis_GGS_124 486410 Human Facultative Pathogen NA NA Streptococcus_equi_equi_4047 553482 Non-Human, Farm Facultative Pathogen 50.875875 -1.632772 Streptococcus_equi_zooepidemicus_H70 40041 Non-Human, Farm Facultative Pathogen 52.245212 0.403362 Streptococcus_equi_zooepidemicus_MGCS10565 552526 Human, Airways (Other) Facultative Pathogen NA NA Streptococcus_gallolyticus_UCN34 637909 Human Anaerobe NA NA NA Streptococcus_gordonii_Challis_CH1 467705 Human Facultative Pathogen NA NA Streptococcus_infantarius_infantarius_ATCC_BAA_102 471872 Human, Gut Facultative NA NA NA Streptococcus_mitis_B6 365659 Human Aerobe Pathogen 51.482 7.211 Streptococcus_mutans_NN2025 511691 Human, Oral (Other) Facultative Pathogen NA NA Streptococcus_mutans_UA159 210007 Human, Oral (Other) Facultative Pathogen NA NA Streptococcus_oralis 1303 Human, Oral (Other) Facultative NA NA NA Streptococcus_parasanguinis_ATCC_15912 760570 Human, Oral (Other) Aerobe NA NA NA Streptococcus_pneumoniae_70585 488221 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Streptococcus_pneumoniae_ATCC_700669 561276 Human Facultative Pathogen NA NA Streptococcus_pneumoniae_CCRI_1974 570507 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Streptococcus_pneumoniae_CCRI_1974M2 574965 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Streptococcus_pneumoniae_CDC0288_04 453364 Human Facultative Pathogen NA NA Streptococcus_pneumoniae_CDC1087_00 453361 Human Facultative Pathogen NA NA Streptococcus_pneumoniae_CDC1873_00 453362 Human Facultative Pathogen NA NA Streptococcus_pneumoniae_CDC3059_06 453365 Human Facultative Pathogen NA NA Streptococcus_pneumoniae_CGSP14 516950 Human Facultative Pathogen NA NA Streptococcus_pneumoniae_D39 373153 Human Facultative Pathogen NA NA Streptococcus_pneumoniae_G54_MLST_ST63 512566 Human, Airways (Nasopharynx) Facultative Pathogen 44.407062 8.933989 Streptococcus_pneumoniae_Hungary19A_6 487214 Human Facultative Pathogen NA NA Streptococcus_pneumoniae_JJA 488222 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Streptococcus_pneumoniae_MLV_016 453366 Human Facultative Pathogen NA NA Streptococcus_pneumoniae_P1031 488223 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Streptococcus_pneumoniae_R6 171101 Human Facultative Pathogen NA NA Streptococcus_pneumoniae_SP11_BS70 406559 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Streptococcus_pneumoniae_SP14_BS69 406560 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Streptococcus_pneumoniae_SP18_BS74 406561 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Streptococcus_pneumoniae_SP195 453363 Human Facultative Pathogen 43.604363 1.442951 Streptococcus_pneumoniae_SP19_BS75 406562 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Streptococcus_pneumoniae_SP23_BS72 406563 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Streptococcus_pneumoniae_SP3_BS71 406556 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Streptococcus_pneumoniae_SP6_BS73 406557 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Streptococcus_pneumoniae_SP9_BS68 406558 Human, Airways (Nasopharynx) Facultative Pathogen NA NA Streptococcus_pneumoniae_TCH8431_19A 525381 Human, Airways (Other) Facultative NA NA NA Streptococcus_pneumoniae_TIGR4 170187 Human Facultative Pathogen 60.19256 11.992046 Streptococcus_pneumoniae_Taiwan19F_14 487213 Human Facultative Pathogen NA NA Streptococcus_pyogenes_M1_GAS 160490 Human Facultative Pathogen NA NA Streptococcus_pyogenes_M49_591 294934 Human, Skin Facultative Pathogen NA NA Streptococcus_pyogenes_MGAS10270 370552 Human Facultative Pathogen NA NA Streptococcus_pyogenes_MGAS10394 286636 Human Facultative Pathogen NA NA Streptococcus_pyogenes_MGAS10750 370554 Human Facultative Pathogen NA NA Streptococcus_pyogenes_MGAS2096 370553 Human Facultative Pathogen NA NA Streptococcus_pyogenes_MGAS315 198466 Human Facultative Pathogen NA NA Streptococcus_pyogenes_MGAS5005 293653 Human, Airways (Nasopharynx) Facultative Pathogen 43.7722 -79.3661 Streptococcus_pyogenes_MGAS6180 319701 Human, Airways (Nasopharynx) Facultative Pathogen 30.4515 -97.7362 Streptococcus_pyogenes_MGAS8232 186103 Human Facultative Pathogen NA NA Streptococcus_pyogenes_MGAS9429 370551 Human Facultative Pathogen NA NA Streptococcus_pyogenes_Manfredo 160491 Human Facultative Pathogen 41.879535 -87.624333 Streptococcus_pyogenes_NZ131 471876 Human Facultative Pathogen NA NA Streptococcus_pyogenes_SSI_1 193567 Human Facultative Pathogen NA NA Streptococcus_salivarius_SK126 596322 Human, Skin Facultative Non-Pathogen NA NA Streptococcus_sanguinis_SK36 388919 Human, Oral (Other) Facultative Pathogen NA NA Streptococcus_sp_2_1_36FAA 469609 Human, Gut Facultative NA NA NA Streptococcus_sp_M143 563037 Human, Airways (Other) Facultative NA NA NA Streptococcus_suis_05ZYH33 391295 Human Facultative Pathogen NA NA Streptococcus_suis_89_1591 286604 Human Facultative Pathogen NA NA Streptococcus_suis_98HAH33 391296 Human Facultative Pathogen NA NA Streptococcus_suis_BM407 568814 Human Facultative Pathogen 10.75918 106.662498 Streptococcus_suis_GZ1 423211 Human Facultative Pathogen NA NA Streptococcus_suis_P1_7 218494 Non-Human, Farm Facultative Pathogen NA NA Streptococcus_suis_SC84 568813 Human Facultative Pathogen NA NA Streptococcus_thermophilus_CNRZ1066 299768 Non-Human Facultative Non-Pathogen NA NA Streptococcus_thermophilus_LMD_9 322159 Non-Human Facultative Non-Pathogen NA NA Streptococcus_thermophilus_LMG_18311 264199 Non-Human Facultative Non-Pathogen NA NA Streptococcus_uberis_0140J 218495 Non-Human, Farm Facultative Pathogen NA NA Streptomyces_avermitilis_MA_4680 227882 Non-Human, Soil Aerobe NA 34.97712 138.383085 Streptomyces_bingchenggensis_BCW_1 749414 Non-Human Aerobe NA 45.803 126.535 Streptomyces_clavuligerus_ATCC_27064 443255 Non-Human, Soil Aerobe NA NA NA Streptomyces_coelicolor_A3_2 100226 Non-Human, Soil Aerobe NA NA NA Streptomyces_flavogriseus_ATCC_33331 591167 Non-Human, Soil Aerobe NA NA NA Streptomyces_griseus_griseus_NBRC_13350 455632 Non-Human, Soil Aerobe NA NA NA Streptomyces_pristinaespiralis_ATCC_25486 457429 Non-Human, Soil Aerobe NA NA NA Streptomyces_roseosporus_NRRL_11379 457430 Non-Human, Soil Aerobe NA NA NA Streptomyces_scabiei_87_22 680198 Non-Human, Soil Aerobe Pathogen NA NA Streptosporangium_roseum_DSM_43021 479432 Non-Human, Soil Aerobe NA 35.91 -79.055 Subdoligranulum_variabile_DSM_15176 411471 Human, Gut Anaerobe Non-Pathogen NA NA Sulfitobacter_sp_EE_36 52598 Non-Human, Marine (Other) Aerobe NA NA NA Sulfitobacter_sp_NAS_14_1 314267 Non-Human, Marine (Other) Aerobe NA NA NA Sulfurihydrogenibium_azorense_Az_Fu1 204536 Non-Human, Soil Facultative NA 37.765221 -25.30756 Sulfurihydrogenibium_sp_YO3AOP1 436114 Non-Human, Soil Facultative NA 44.636707 -110.438919 Sulfurihydrogenibium_yellowstonense_SS_5 432331 Non-Human, Hydrothermal Microaerophilic NA 44.376262 -110.690383 Sulfurospirillum_deleyianum_DSM_6946 525898 Non-Human Microaerophilic NA 52.17 10.55 Sulfurovum_sp_NBC37_1 387093 Non-Human, Marine (Other) Anaerobe Non-Pathogen 27.783333 126.883333 Symbiobacterium_thermophilum_IAM_14863 292459 Non-Human, Soil Anaerobe NA 34.385203 132.455293 Synechococcus_elongatus_PCC_6301 269084 Non-Human Facultative NA NA NA Synechococcus_elongatus_PCC_7942 1140 Non-Human Facultative NA NA NA Synechococcus_sp_BL107 313625 Non-Human, Marine (Other) Facultative NA 41.666667 2.8 Synechococcus_sp_CC9311 64471 Non-Human, Marine (Other) NA Non-Pathogen 31.9001 -124.1668 Synechococcus_sp_CC9605 110662 Non-Human, Marine (Other) NA NA NA NA Synechococcus_sp_CC9902 316279 Non-Human, Marine (Other) NA NA NA NA Synechococcus_sp_JA_2_3Ba_2_13 321332 Non-Human, Hydrothermal Facultative NA 44.376262 -110.690383 Synechococcus_sp_JA_3_3Ab 321327 Non-Human, Hydrothermal Facultative NA 44.533823 -110.797433 Synechococcus_sp_PCC_7002 32049 Non-Human, Marine (Other) Facultative NA 17.972949 -67.047164 Synechococcus_sp_PCC_7335 91464 Non-Human, Marine (Other) Facultative NA 31.31667 -113.53333 Synechococcus_sp_RCC307 316278 Non-Human, Marine (Other) Facultative NA 39.166667 6.166667 Synechococcus_sp_RS9916 221359 Non-Human, Marine (Other) Facultative NA 29.46667 34.91667 Synechococcus_sp_RS9917 221360 Non-Human, Marine (Other) Facultative NA 29.46667 34.91667 Synechococcus_sp_WH_5701 69042 Non-Human, Marine (Other) Facultative NA 41.058085 -72.8656045 Synechococcus_sp_WH_7803 32051 Non-Human, Marine (Other) NA NA 33.7423 -67.4913 Synechococcus_sp_WH_7805 59931 Non-Human, Marine (Other) Facultative NA 33.75 -67.5 Synechococcus_sp_WH_8102 84588 Non-Human, Marine (Other) NA NA 22.495 -65.6 Synechococcus_sp_WH_8109 166314 Non-Human, Marine (Other) Facultative NA 39.643333 -70.462 Synechocystis_sp_PCC_6803 1148 Non-Human Facultative NA NA NA Syntrophobacter_fumaroxidans_MPOB 335543 Non-Human Anaerobe Non-Pathogen NA NA Syntrophomonas_wolfei_wolfei_Goettingen 335541 Non-Human Anaerobe NA 51.532 9.928 Syntrophothermus_lipocalidus_DSM_12680 643648 Non-Human Obligate anaerobe NA NA NA Syntrophus_aciditrophicus_SB 56780 Non-Human Anaerobe NA 35.191213 -97.441347 Teredinibacter_turnerae_T7901 377629 Non-Human NA NA 34.726186 -76.647763 Thalassobium_sp_R2A62 633131 Non-Human, Marine (Other) NA NA 44.65 -124.167 Thauera_sp_MZ1T 85643 Non-Human Facultative NA NA NA Thermanaerovibrio_acidaminovorans_DSM_6589 525903 Non-Human Obligate anaerobe NA 51.589 4.774 Thermoanaerobacter_brockii_subsp_finnii_Ako_1 509193 Non-Human Anaerobe NA -2.042025 29.407518 Thermoanaerobacter_ethanolicus_CCSD1 589861 Non-Human Anaerobe NA NA NA Thermoanaerobacter_italicus_Ab9 580331 Non-Human Anaerobe NA 45.360542 11.789381 Thermoanaerobacter_mathranii_subsp_mathranii_str_A3 583358 Non-Human, Hydrothermal Anaerobe NA NA NA Thermoanaerobacter_pseudethanolicus_ATCC_33223 340099 Non-Human, Hydrothermal Anaerobe NA 44.376262 -110.690383 Thermoanaerobacter_sp_X513 573062 Non-Human Anaerobe NA 39.75 -107.62 Thermoanaerobacter_sp_X514 399726 Non-Human Anaerobe NA 39.348317 -107.859192 Thermoanaerobacter_sp_X561 588857 Non-Human Anaerobe NA NA NA Thermoanaerobacter_tengcongensis_MB4 273068 Non-Human, Hydrothermal Anaerobe NA NA NA Thermoanaerobacterium_thermosaccharolyticum_DSM_571 580327 Non-Human Obligate anaerobe NA NA NA Thermobaculum_terrenum_ATCC_BAA_798 525904 Non-Human, Soil Obligate aerobe NA 44.393704 -110.567703 Thermobifida_fusca_YX 269800 Human Aerobe Pathogen NA NA Thermobispora_bispora_DSM_43833 469371 Non-Human Aerobe NA 52.52 14.42 Thermocrinis_albus_DSM_14484 638303 Non-Human, Hydrothermal Microaerophilic NA 64 -21.2 Thermodesulfovibrio_yellowstonii_DSM_11347 289376 Non-Human NA NA 44.453591 -110.358796 Thermomicrobium_roseum_DSM_5159 309801 Non-Human Aerobe NA 44.376262 -110.690383 Thermomonospora_curvata_DSM_43183 471852 Non-Human Aerobe NA NA NA Thermosinus_carboxydivorans_Nor1 401526 Non-Human, Hydrothermal Anaerobe NA NA NA Thermosipho_africanus_TCF52B 484019 Non-Human Anaerobe NA NA NA Thermosipho_melanesiensis_BI429 391009 Non-Human, Marine (Other) Anaerobe NA -22.058056 -176.0775 Thermosynechococcus_elongatus_BP_1 197221 Non-Human, Hydrothermal NA NA 33.318279 131.45264 Thermotoga_lettingae_TMO 416591 Non-Human Anaerobe NA 51.9646 5.6623 Thermotoga_maritima_MSB8 243274 Non-Human, Marine (Heterotroph) Anaerobe NA NA NA Thermotoga_naphthophila_RKU_10 590168 Non-Human Anaerobe NA 37.916192 139.036413 Thermotoga_neapolitana_DSM_4359 309803 Non-Human Anaerobe NA 40.840097 14.251636 Thermotoga_sp_RQ2 126740 Non-Human Anaerobe NA NA NA Thermus_aquaticus_Y51MC23 498848 Non-Human, Hydrothermal Obligate aerobe NA NA NA Thermus_thermophilus_HB27 262724 Non-Human Aerobe NA NA NA Thermus_thermophilus_HB8 300852 Non-Human, Hydrothermal Aerobe NA 35.0942 138.37738 Thioalkalivibrio_sp_HL_EbGR7 396588 Non-Human Facultative NA NA NA Thioalkalivibrio_sp_K90mix 396595 Non-Human Facultative NA NA NA Thiobacillus_denitrificans_ATCC_25259 292415 Non-Human, Soil Facultative NA NA NA Thiomicrospira_crunogena_XCL_2 317025 Non-Human, Marine (Other) Anaerobe NA NA NA Thiomicrospira_denitrificans_ATCC_33889 326298 Non-Human, Marine (Other) Anaerobe NA NA NA Thiomonas_intermedia_K12 75379 Non-Human Aerobe NA 53.553407 9.992196 Tolumonas_auensis_TA_4_DSM_9187 595494 Non-Human Facultative NA NA NA Treponema_denticola_ATCC_35405 243275 Human Anaerobe Pathogen NA NA Treponema_pallidum_pallidum_Nichols 243276 Human Anaerobe Pathogen NA NA Treponema_pallidum_pallidum_SS14 455434 Human Anaerobe Pathogen 33.7532 -84.3901 Treponema_pallidum_subsp_pallidum_str_Chicago 666714 Human Anaerobe Pathogen NA NA Treponema_vincentii_ATCC_35580 596324 Human, Oral (Other) NA NA NA NA Trichodesmium_erythraeum_IMS101 203124 Non-Human, Marine (Other) Aerobe Non-Pathogen 35 -76 Tropheryma_whipplei_TW08_27 218496 Human Aerobe Pathogen NA NA Tropheryma_whipplei_Twist 203267 Human Aerobe Pathogen NA NA Truepera_radiovictrix_DSM_17093 649638 Non-Human, Hydrothermal Aerobe Pathogen 37.946797 -25.490113 Tsukamurella_paurometabola_DSM_20162 521096 Human, Soil Aerobe NA NA NA Turicibacter_sp_PC909 702450 Human, Gut Anaerobe NA NA NA Ulvibacter_sp_SCB49 50743 Non-Human, Marine (Other) NA NA 32.86694 -117.2575 Ureaplasma_parvum_serovar_14_str_ATCC_33697 515609 Human, Urogenital (Other) Facultative Pathogen NA NA Ureaplasma_parvum_serovar_1_str_ATCC_27813 515608 Human Facultative Pathogen NA NA Ureaplasma_parvum_serovar_3_str_ATCC_27815 505682 Human Facultative Pathogen NA NA Ureaplasma_parvum_serovar_3_str_ATCC_700970 273119 Human, Urogenital (Other) Facultative Pathogen 33.5324 -86.803 Ureaplasma_parvum_serovar_6_str_ATCC_27818 519851 Human, Urogenital (Other) Facultative Pathogen NA NA Ureaplasma_urealyticum_serovar_10_str_ATCC_33699 565575 Human, Urogenital (Other) Facultative Pathogen NA NA Ureaplasma_urealyticum_serovar_11_str_ATCC_33695 526347 Human, Urogenital (Other) Facultative Pathogen NA NA Ureaplasma_urealyticum_serovar_12_str_ATCC_33696 550747 Human, Urogenital (Other) Facultative Pathogen NA NA Ureaplasma_urealyticum_serovar_13_str_ATCC_33698 515611 Human, Urogenital (Other) Facultative Pathogen NA NA Ureaplasma_urealyticum_serovar_2_str_ATCC_27814 626096 Human, Urogenital (Other) Facultative Pathogen NA NA Ureaplasma_urealyticum_serovar_4_str_ATCC_27816 550748 Human, Urogenital (Other) Facultative Pathogen NA NA Ureaplasma_urealyticum_serovar_5_str_ATCC_27817 518603 Human, Urogenital (Other) Facultative Pathogen NA NA Ureaplasma_urealyticum_serovar_7_str_ATCC_27819 519849 Human, Urogenital (Other) Facultative Pathogen NA NA Ureaplasma_urealyticum_serovar_8_str_ATCC_27618 626095 Human, Urogenital (Other) Facultative Pathogen NA NA Ureaplasma_urealyticum_serovar_9_str_ATCC_33175 550773 Human, Urogenital (Other) Facultative Pathogen 49.263 123.138 Variovorax_paradoxus_S110 543728 Non-Human, Soil Aerobe NA NA NA Veillonella_dispar_ATCC_17748 546273 Human, Oral (Other) Anaerobe NA NA NA Veillonella_parvula_ATCC_17745 686660 Human, Oral (Other) Anaerobe NA NA NA Veillonella_parvula_DSM_2008 479436 Human, Gut Anaerobe Pathogen NA NA Veillonella_sp_3_1_44 457416 Human, Gut Anaerobe NA NA NA Veillonella_sp_6_1_27 450749 Human, Gut Anaerobe NA NA NA Verminephrobacter_eiseniae_EF01_2 391735 Non-Human, Soil NA Non-Pathogen 47.606 -122.332 Verrucomicrobiae_bacterium_DG1235 382464 Non-Human, Marine (Other) Aerobe NA 50.56667 -4.23333 Verrucomicrobium_spinosum_DSM_4136 240016 Non-Human Facultative NA 35.45765 139.574203 Vibrio_alginolyticus_12G01 314288 Human, Marine (Other) Facultative Pathogen NA NA Vibrio_alginolyticus_40B 674977 Non-Human, Marine (Heterotroph) Facultative NA NA NA Vibrio_campbellii_AND4 314289 Non-Human, Marine (Other) Facultative NA 7.79944 98.2075 Vibrio_cholera_CIRS_101 661513 Human Facultative NA 23.709921 90.407143 Vibrio_cholerae_12129_1 592313 Human Facultative NA NA NA Vibrio_cholerae_1587 412966 Human Facultative NA NA NA Vibrio_cholerae_2740_80 412614 Non-Human Facultative Non-Pathogen NA NA Vibrio_cholerae_623_39 417397 Human Facultative NA NA NA Vibrio_cholerae_AM_19226 404974 Human Facultative NA NA NA Vibrio_cholerae_B33 417400 Human Facultative NA -19.827271 34.836109 Vibrio_cholerae_BX_330286 593587 Human Facultative NA NA NA Vibrio_cholerae_CT_5369_93 675809 Human, Gut, Marine (Heterotroph) Facultative NA NA NA Vibrio_cholerae_INDRE_91_1 675808 Human, Gut, Marine (Heterotroph) Facultative NA NA NA Vibrio_cholerae_M66_2 579112 Human Facultative Pathogen -5.14549 119.4016 Vibrio_cholerae_MAK_757 412967 Human Facultative NA NA NA Vibrio_cholerae_MJ_1236 593588 Human Facultative Pathogen 23.34593 90.71093 Vibrio_cholerae_MO10 345072 Human Facultative NA NA NA Vibrio_cholerae_MZO_2 417398 Human, Gut Facultative NA NA NA Vibrio_cholerae_MZO_3 412883 Human Facultative NA NA NA Vibrio_cholerae_NCTC_8457 417399 Human Facultative NA NA NA Vibrio_cholerae_O1_bv_eltor_N16961 243277 Human, Gut Facultative Pathogen NA NA Vibrio_cholerae_O395 345073 Human Facultative Pathogen NA NA Vibrio_cholerae_RC27 675807 Human, Gut, Marine (Heterotroph) Facultative NA NA NA Vibrio_cholerae_RC385 345074 Human, Marine (Heterotroph) Facultative NA 37.584154 -76.178374 Vibrio_cholerae_RC9 593589 Human Facultative NA NA NA Vibrio_cholerae_TMA_21 593590 Human Facultative NA NA NA Vibrio_cholerae_TM_11079_80 593586 Human Facultative NA NA NA Vibrio_cholerae_V51 345075 Human, Gut Facultative NA NA NA Vibrio_cholerae_V52 345076 Human, Gut Facultative Pathogen NA NA Vibrio_cholerae_bv_albensis_VL426 593585 Human Facultative NA NA NA Vibrio_coralliilyticus_ATCC_BAA_450 675814 Non-Human, Marine (Heterotroph) Facultative NA -6.164948 39.202602 Vibrio_fischeri_ES114 312309 Non-Human Facultative Non-Pathogen NA NA Vibrio_fischeri_MJ11 388396 Non-Human Facultative NA 34 132 Vibrio_furnissii_CIP_102972 675811 Human, Gut, Marine (Heterotroph) Facultative NA NA NA Vibrio_harveyi_1DA3 673519 Non-Human, Marine (Heterotroph) Facultative NA NA NA Vibrio_harveyi_ATCC_BAA_1116 338187 Non-Human, Marine (Heterotroph) Facultative Pathogen NA NA Vibrio_harveyi_HY01 410291 Non-Human, Marine (Heterotroph) Facultative NA NA NA Vibrio_metschnikovii_CIP_69_14 675813 Non-Human, Marine (Heterotroph) Facultative NA NA NA Vibrio_mimicus_MB_451 675806 Human, Gut, Marine (Heterotroph) Facultative NA 23.34593 90.71093 Vibrio_mimicus_VM223 675820 Non-Human, Marine (Heterotroph) Facultative NA -23.523322 -46.638565 Vibrio_mimicus_VM573 671076 Non-Human, Marine (Heterotroph) Facultative NA NA NA Vibrio_orientalis_CIP_102891 675816 Non-Human, Marine (Heterotroph) Facultative NA NA NA Vibrio_parahaemolyticus_16 391586 Human, Marine (Heterotroph) Facultative NA NA NA Vibrio_parahaemolyticus_AN_5034 563773 Human Facultative NA NA NA Vibrio_parahaemolyticus_AQ3810 419109 Human Facultative NA NA NA Vibrio_parahaemolyticus_AQ4037 563772 Human Facultative NA NA NA Vibrio_parahaemolyticus_K5030 627611 Human Facultative NA NA NA Vibrio_parahaemolyticus_Peru_466 563771 Human Facultative NA NA NA Vibrio_parahaemolyticus_RIMD_2210633 223926 Human Facultative Pathogen 34.693738 135.502165 Vibrio_shilonii_AK1 391591 Non-Human, Marine (Heterotroph) Facultative Pathogen 32.49139 34.88611 Vibrio_sp_Ex25 150340 Non-Human, Marine (Heterotroph) Facultative NA NA NA Vibrio_sp_MED222 314290 Non-Human, Marine (Heterotroph) Facultative NA 41.66667 2.8 Vibrio_sp_RC586 675815 Non-Human, Marine (Heterotroph) Facultative NA 38.684009 -76.40213 Vibrio_splendidus_LGP32 575788 Non-Human Facultative Pathogen NA NA Vibrio_vulnificus_CMCP6 216895 Human Facultative Pathogen NA NA Vibrio_vulnificus_YJ016 196600 Human Facultative Pathogen NA NA Vibrionales_bacterium_SWAT_3 391574 Non-Human, Marine (Other) NA NA 32.85 -117.25 Waddlia_chondrophila_WSU_86_1044 716544 Non-Human, Farm NA NA NA NA Weissella_paramesenteroides_ATCC_33313 585506 Human, Gut Aerobe NA NA NA Wigglesworthia_glossinidia_endosymbiont_of_Glossina_brevipalpis 36870 Non-Human NA NA NA NA Wolbachia_endosymbiont_TRS_of_Brugia_malayi 292805 Non-Human Aerobe NA NA NA Wolbachia_endosymbiont_of_Culex_quinquefasciatus_JHB 569881 Non-Human Aerobe NA NA NA Wolbachia_endosymbiont_of_Drosophila_ananassae 307502 Non-Human Aerobe NA NA NA Wolbachia_endosymbiont_of_Drosophila_melanogaster 163164 Non-Human Aerobe NA NA NA Wolbachia_endosymbiont_of_Drosophila_simulans 77038 Non-Human Aerobe NA NA NA Wolbachia_endosymbiont_of_Drosophila_willistoni_TSC_14030_0811_24 384035 Non-Human Aerobe NA NA NA Wolbachia_pipientis_wPip 955 Non-Human Aerobe NA NA NA Wolbachia_sp_wRi 66084 Non-Human Aerobe NA NA NA Wolinella_succinogenes_DSM_1740 273121 Non-Human, Farm Anaerobe Non-Pathogen NA NA Xanthobacter_autotrophicus_Py2 78245 Non-Human, Soil Facultative NA NA NA Xanthomonas_albilineans 29447 Non-Human NA NA NA NA Xanthomonas_axonopodis_pv_citri_306 190486 Non-Human Aerobe Pathogen NA NA Xanthomonas_campestris_pv_campestris 340 Non-Human Aerobe Pathogen NA NA Xanthomonas_campestris_pv_campestris_8004 314565 Non-Human Aerobe Pathogen 50.928014 -0.461707 Xanthomonas_campestris_pv_campestris_ATCC_33913 190485 Non-Human Aerobe Pathogen NA NA Xanthomonas_campestris_pv_musacearum_NCPPB4381 559737 Non-Human Aerobe Pathogen NA NA Xanthomonas_campestris_pv_vasculorum_NCPPB702 559736 Non-Human Aerobe Pathogen NA NA Xanthomonas_campestris_pv_vesicatoria_85_10 316273 Non-Human Aerobe Pathogen NA NA Xanthomonas_fuscans_subsp_aurantifolii_str_ICPB_10535 427082 Non-Human Aerobe Pathogen NA NA Xanthomonas_fuscans_subsp_aurantifolii_str_ICPB_11122 427081 Non-Human Aerobe Pathogen NA NA Xanthomonas_oryzae_pv_oryzae_KACC10331 291331 Non-Human Aerobe Pathogen NA NA Xanthomonas_oryzae_pv_oryzae_MAFF_311018 342109 Non-Human Aerobe Pathogen NA NA Xanthomonas_oryzae_pv_oryzae_PXO99A 360094 Non-Human Aerobe Pathogen NA NA Xanthomonas_oryzae_pv_oryzicola_BLS256 383407 Non-Human Aerobe Pathogen NA NA Xenorhabdus_bovienii_SS_2004 406818 Non-Human, Soil Facultative Pathogen NA NA Xylanimonas_cellulosilytica_DSM_15894 446471 Non-Human, Soil Aerobe NA 40.964972 -5.663047 Xylella_fastidiosa_9a5c 160492 Non-Human Aerobe Pathogen NA -43.703135 Xylella_fastidiosa_Ann_1 155920 Non-Human Aerobe Pathogen NA NA Xylella_fastidiosa_Dixon 155919 Non-Human Aerobe Pathogen NA NA Xylella_fastidiosa_M12 405440 Non-Human Aerobe Pathogen NA NA Xylella_fastidiosa_M23 405441 Non-Human Aerobe Pathogen NA NA Xylella_fastidiosa_Temecula1 183190 Non-Human Aerobe Pathogen NA NA Yersinia_bercovieri_ATCC_43970 349968 Human, Gut Facultative Pathogen NA NA Yersinia_enterocolitica_enterocolitica_8081 393305 Human Aerobe Pathogen NA NA Yersinia_frederiksenii_ATCC_33641 349966 Human Facultative Pathogen NA NA Yersinia_kristensenii_ATCC_33638 527012 Human, Urogenital (Other) Facultative Pathogen NA NA Yersinia_mollaretii_ATCC_43969 349967 Human, Soil, Food Facultative Pathogen NA NA Yersinia_pestis_Angola 349746 Human Facultative Pathogen NA NA Yersinia_pestis_Antiqua 360102 Human Facultative Pathogen NA NA Yersinia_pestis_CA88_4125 412420 Human Facultative Pathogen 35.985007 -121.245346 Yersinia_pestis_CO92 214092 Human, Airways (Other) Facultative Pathogen NA NA Yersinia_pestis_D106004 637382 Non-Human Facultative Pathogen NA NA Yersinia_pestis_D182038 637385 Non-Human Facultative Pathogen NA NA Yersinia_pestis_KIM 187410 Human Facultative Pathogen NA NA Yersinia_pestis_KIM_D27 687916 Human Facultative Pathogen NA NA Yersinia_pestis_Nepal516 377628 Human Facultative Pathogen NA NA Yersinia_pestis_Pestoides_A 545431 Human Facultative Pathogen NA NA Yersinia_pestis_Pestoides_F 386656 Human Facultative Pathogen NA NA Yersinia_pestis_Z176003 637386 Non-Human Facultative Pathogen NA NA Yersinia_pestis_biovar_Orientalis_str_India_195 547047 Human Facultative Pathogen NA NA Yersinia_pestis_biovar_Orientalis_str_PEXU2 547046 Human Facultative Pathogen NA NA Yersinia_pestis_bv_Antiqua_B42003004 404215 Human Facultative Pathogen NA NA Yersinia_pestis_bv_Antiqua_E1979001 360099 Human Facultative Pathogen NA NA Yersinia_pestis_bv_Mediaevalis_K1973002 404216 Human Facultative Pathogen NA NA Yersinia_pestis_bv_Microtus_91001 229193 Human Facultative Pathogen NA NA Yersinia_pestis_bv_Orientalis_IP275 373665 Human Facultative Pathogen NA NA Yersinia_pestis_bv_Orientalis_MG05_1020 404217 Human Facultative Pathogen NA NA Yersinia_pseudotuberculosis_IP_31758 349747 Human, Gut Facultative Pathogen 45.052564 135 Yersinia_pseudotuberculosis_IP_32953 273123 Non-Human, Soil Facultative Pathogen NA NA Yersinia_pseudotuberculosis_PB1 502801 Human Facultative Pathogen NA NA Yersinia_pseudotuberculosis_YPIII 502800 Human Facultative Pathogen NA NA Yersinia_rohdei_ATCC_43380 527004 Non-Human Facultative Non-Pathogen NA NA Yersinia_ruckeri_ATCC_29473 527005 Non-Human Facultative Pathogen NA NA Zunongwangia_profunda_SM_A87 655815 Non-Human Obligate aerobe NA NA NA Zymomonas_mobilis_mobilis_ZM4 264203 Non-Human Facultative NA NA NA Zymomonas_mobilis_subsp_mobilis_ATCC_10988 555217 Non-Human Facultative NA NA NA Zymomonas_mobilis_subsp_mobilis_NCIMB_11163 622759 Non-Human Facultative NA NA NA alpha_proteobacterium_HIMB114 684719 Non-Human, Marine (Other) NA NA 21.460467 -157.787657 bacterium_Ellin514 320771 Non-Human, Soil Aerobe NA NA NA bacterium_S5 653733 Non-Human Anaerobe NA NA NA beta_proteobacterium_KB13 314607 Non-Human, Marine (Other) NA NA 21.460467 -157.787657 delta_proteobacterium_MLMS_1 262489 Non-Human Anaerobe NA 37.986853 -119.045711 gamma_proteobacterium_HTCC5015 391615 Non-Human, Marine (Other) NA NA NA NA gamma_proteobacterium_NOR51_B 565045 Non-Human, Marine (Other) NA NA 54.9725 8.3398 gamma_proteobacterium_NOR5_3 566466 Non-Human, Marine (Other) NA NA 54.9725 8.3398 marine_gamma_proteobacterium_HTCC2080 247639 Non-Human, Marine (Other) NA NA 44.650749 -124.064441 marine_gamma_proteobacterium_HTCC2143 247633 Non-Human, Marine (Other) NA NA 44.652348 -124.063185 marine_gamma_proteobacterium_HTCC2148 247634 Non-Human, Marine (Other) NA NA 44.65167 -124.41167